Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:04:25 (3397246): wrapper (7.7.26015): starting
19:04:25 (3397246): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 19:04:25] Arguments: --nthreads 8
[2025-10-10 19:04:25] Threads: 8
[2025-10-10 19:04:25] Checking for CVMFS
[2025-10-10 19:04:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 19:04:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 19:04:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 19:04:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 19:04:27] 2.11.3.0 2046 29426 209484 151567 2 278 27724541 45568001 18150 130560 0 201819836 99.852 87067046 25230 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 19:04:27] CVMFS is ok
[2025-10-10 19:04:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 19:04:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 19:04:27] Further information can be found at the LHC@home message board.
[2025-10-10 19:04:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 19:04:27] Checking for apptainer binary...
[2025-10-10 19:04:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 19:04:27] Running /usr/bin/apptainer --version
[2025-10-10 19:04:27] apptainer version 1.4.1-1.el9
[2025-10-10 19:04:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 19:04:27] wns0018.triumf.lcg
[2025-10-10 19:04:27] apptainer works
[2025-10-10 19:04:27] Set ATHENA_PROC_NUMBER=8
[2025-10-10 19:04:27] Set ATHENA_CORE_NUMBER=8
[2025-10-10 19:04:27] Starting ATLAS job with PandaID=6837875229
[2025-10-10 19:04:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 19:11:49]  *** The last 200 lines of the pilot log: ***
[2025-10-10 19:11:49] 2025-10-11 02:11:14,994 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 19:11:49] 2025-10-11 02:11:14,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | WARNING  | wrong length of table data, x=[1760148414.0, 1760148475.0], y=[2944.0, 467642.0] (must be same and length>=4)
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | ..............................
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | . Timing measurements:
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | . get job = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,005 | INFO     | . initial setup = 5 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,005 | INFO     | . payload setup = 30 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,005 | INFO     | . stage-in = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | . payload execution = 130 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | . stage-out = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | . log creation = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | ..............................
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837875229/pilotlog.txt
[2025-10-10 19:11:49] 2025-10-11 02:11:15,053 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 19:11:49] - Log from pilotlog.txt -
[2025-10-10 19:11:49] 2025-10-11 02:11:14,979 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837875229/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 19:11:49] 2025-10-11 02:11:14,981 | INFO     | extracted standard info from prmon json
[2025-10-10 19:11:49] 2025-10-11 02:11:14,994 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 19:11:49] 2025-10-11 02:11:14,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 19:11:49] 2025-10-11 02:11:14,994 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 19:11:49] 2025-10-11 02:11:14,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | WARNING  | wrong length of table data, x=[1760148414.0, 1760148475.0], y=[2944.0, 467642.0] (must be same and length>=4)
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | ..............................
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | . Timing measurements:
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | . get job = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,005 | INFO     | . initial setup = 5 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,005 | INFO     | . payload setup = 30 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,005 | INFO     | . stage-in = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | . payload execution = 130 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | . stage-out = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | . log creation = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | ..............................
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837875229/pilotlog.txt
[2025-10-10 19:11:49] 2025-10-11 02:11:15,065 | WARNING  | 
[2025-10-10 19:11:49] [begin log extracts]
[2025-10-10 19:11:49] - Log from pilotlog.txt -
[2025-10-10 19:11:49] 2025-10-11 02:11:14,979 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837875229/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 19:11:49] 2025-10-11 02:11:14,981 | INFO     | extracted standard info from prmon json
[2025-10-10 19:11:49] 2025-10-11 02:11:14,994 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 19:11:49] 2025-10-11 02:11:14,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 19:11:49] 2025-10-11 02:11:14,994 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 19:11:49] 2025-10-11 02:11:14,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | WARNING  | wrong length of table data, x=[1760148414.0, 1760148475.0], y=[2944.0, 467642.0] (must be same and length>=4)
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | ..............................
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | . Timing measurements:
[2025-10-10 19:11:49] 2025-10-11 02:11:14,995 | INFO     | . get job = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,005 | INFO     | . initial setup = 5 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,005 | INFO     | . payload setup = 30 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,005 | INFO     | . stage-in = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | . payload execution = 130 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | . stage-out = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | . log creation = 0 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | ..............................
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 19:11:49] 2025-10-11 02:11:15,006 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837875229/pilotlog.txt
[2025-10-10 19:11:49] [end log extracts]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,066 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 19:11:49] 2025-10-11 02:11:15,066 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 19:11:49] 2025-10-11 02:11:15,201 | INFO     | time since job start (355s) is within the limit (172800.0s)
[2025-10-10 19:11:49] 2025-10-11 02:11:15,583 | INFO     | 
[2025-10-10 19:11:49] 2025-10-11 02:11:15,583 | INFO     | job summary report
[2025-10-10 19:11:49] 2025-10-11 02:11:15,583 | INFO     | --------------------------------------------------
[2025-10-10 19:11:49] 2025-10-11 02:11:15,583 | INFO     | PanDA job id: 6837875229
[2025-10-10 19:11:49] 2025-10-11 02:11:15,583 | INFO     | task id: 46676269
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 19:08:34,686 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | pilot state: failed 
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | transexitcode: 65
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | exeerrorcode: 65
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | exitcode: 65
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | cpuconsumptiontime: 19 s
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | nevents: 0
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | neventsw: 0
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | pid: 3408188
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | pgrp: 3408188
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | corecount: 8
[2025-10-10 19:11:49] 2025-10-11 02:11:15,584 | INFO     | event service: False
[2025-10-10 19:11:49] 2025-10-11 02:11:15,585 | INFO     | sizes: {0: 2348626, 1: 2348881, 2: 2348881, 13: 2348909, 19: 2349227, 23: 2349255, 165: 2372785, 167: 2377077, 169: 2377133, 314: 2377299}
[2025-10-10 19:11:49] 2025-10-11 02:11:15,585 | INFO     | --------------------------------------------------
[2025-10-10 19:11:49] 2025-10-11 02:11:15,585 | INFO     | 
[2025-10-10 19:11:49] 2025-10-11 02:11:15,585 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 19:11:49] 2025-10-11 02:11:15,624 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,626 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 19:11:49] 2025-10-11 02:11:15,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,626 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 19:11:49] 2025-10-11 02:11:15,626 | INFO     | job 6837875229 has completed (purged errors)
[2025-10-10 19:11:49] 2025-10-11 02:11:15,626 | INFO     | overall cleanup function is called
[2025-10-10 19:11:49] 2025-10-11 02:11:16,637 | INFO     | --- collectZombieJob: --- 10, [3408188]
[2025-10-10 19:11:49] 2025-10-11 02:11:16,637 | INFO     | zombie collector waiting for pid 3408188
[2025-10-10 19:11:49] 2025-10-11 02:11:16,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 19:11:49] 2025-10-11 02:11:16,637 | INFO     | collected zombie processes
[2025-10-10 19:11:49] 2025-10-11 02:11:16,637 | INFO     | will attempt to kill all subprocesses of pid=3408188
[2025-10-10 19:11:49] 2025-10-11 02:11:17,277 | INFO     | process IDs to be killed: [3408188] (in reverse order)
[2025-10-10 19:11:49] 2025-10-11 02:11:17,669 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 19:11:49] 2025-10-11 02:11:17,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 19:11:49] 2025-10-11 02:11:17,709 | INFO     | did not find any defunct processes belonging to 3408188
[2025-10-10 19:11:49] 2025-10-11 02:11:17,732 | INFO     | did not find any defunct processes belonging to 3408188
[2025-10-10 19:11:49] 2025-10-11 02:11:17,733 | INFO     | ready for new job
[2025-10-10 19:11:49] 2025-10-11 02:11:17,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 19:11:49] 2025-10-11 02:11:17,738 | INFO     | ***************************************
[2025-10-10 19:11:49] 2025-10-11 02:11:17,739 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 19:11:49] 2025-10-11 02:11:17,739 | INFO     | ***************************************
[2025-10-10 19:11:49] 2025-10-11 02:11:17,739 | INFO     | 
[2025-10-10 19:11:49] 2025-10-11 02:11:17,740 | INFO     | architecture information:
[2025-10-10 19:11:49] 2025-10-11 02:11:17,740 | INFO     | executing command: cat /etc/os-release
[2025-10-10 19:11:49] 2025-10-11 02:11:17,838 | INFO     | cat /etc/os-release:
[2025-10-10 19:11:49] NAME="CentOS Linux"
[2025-10-10 19:11:49] VERSION="7 (Core)"
[2025-10-10 19:11:49] ID="centos"
[2025-10-10 19:11:49] ID_LIKE="rhel fedora"
[2025-10-10 19:11:49] VERSION_ID="7"
[2025-10-10 19:11:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 19:11:49] ANSI_COLOR="0;31"
[2025-10-10 19:11:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 19:11:49] HOME_URL="https://www.centos.org/"
[2025-10-10 19:11:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 19:11:49] 
[2025-10-10 19:11:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 19:11:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 19:11:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 19:11:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 19:11:49] 
[2025-10-10 19:11:49] 2025-10-11 02:11:17,839 | INFO     | ***************************************
[2025-10-10 19:11:49] 2025-10-11 02:11:18,342 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 19:11:49] 2025-10-11 02:11:18,377 | INFO     | sufficient remaining disk space (1120136069120 B)
[2025-10-10 19:11:49] 2025-10-11 02:11:18,377 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 19:11:49] 2025-10-11 02:11:18,377 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 19:11:49] 2025-10-11 02:11:18,377 | INFO     | update_server=False
[2025-10-10 19:11:49] 2025-10-11 02:11:18,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 19:11:49] 2025-10-11 02:11:18,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:11:49] 2025-10-11 02:11:18,379 | INFO     | aborting loop
[2025-10-10 19:11:49] 2025-10-11 02:11:18,382 | INFO     | all data control threads have been joined
[2025-10-10 19:11:49] 2025-10-11 02:11:18,632 | INFO     | all job control threads have been joined
[2025-10-10 19:11:49] 2025-10-11 02:11:19,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 19:11:49] 2025-10-11 02:11:19,383 | INFO     | [job] retrieve thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:19,388 | INFO     | [data] control thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:19,390 | INFO     | [job] job monitor thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:19,569 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:19,644 | INFO     | all payload control threads have been joined
[2025-10-10 19:11:49] 2025-10-11 02:11:19,647 | INFO     | [job] control thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:19,695 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:19,759 | INFO     | [job] validate thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:19,759 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:20,194 | INFO     | [monitor] cgroup control has ended
[2025-10-10 19:11:49] 2025-10-11 02:11:20,288 | INFO     | [data] copytool_in thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:20,379 | INFO     | [payload] failed_post thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:20,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:11:49] 2025-10-11 02:11:20,650 | INFO     | [payload] control thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:20,775 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:20,798 | INFO     | [payload] validate_post thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:21,279 | INFO     | [data] copytool_out thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:21,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 19:11:49] 2025-10-11 02:11:21,548 | INFO     | [job] queue monitor thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:25,586 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 19:11:49] 2025-10-11 02:11:27,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139922688980800)>', '<ExcThread(monitor, started 139922149193472)>']
[2025-10-10 19:11:49] 2025-10-11 02:11:32,579 | INFO     | all workflow threads have been joined
[2025-10-10 19:11:49] 2025-10-11 02:11:32,579 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 19:11:49] 2025-10-11 02:11:32,579 | INFO     | traces error code: 0
[2025-10-10 19:11:49] 2025-10-11 02:11:32,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 19:11:49] 2025-10-11 02:11:48,778 | INFO     | PID=3401298 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 19:11:49] 2025-10-11 02:11:48,779 | INFO     | .. there are 33 such processes running
[2025-10-10 19:11:49] 2025-10-11 02:11:48,780 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 19:11:49] 2025-10-11 02:11:48,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 19:11:49] 2025-10-11 02:11:48,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 19:11:49] 2025-10-11 02:11:48,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 19:11:49] 2025-10-11 02:11:48,780 | INFO     | [monitor] control thread has ended
[2025-10-10 19:11:49] 2025-10-11 02:11:49,047 [wrapper] ==== pilot stdout END ====
[2025-10-10 19:11:49] 2025-10-11 02:11:49,054 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 19:11:49] 2025-10-11 02:11:49,059 [wrapper] pilotpid: 3401298
[2025-10-10 19:11:49] 2025-10-11 02:11:49,067 [wrapper] Pilot exit status: 0
[2025-10-10 19:11:49] 2025-10-11 02:11:49,096 [wrapper] pandaids: 6837875229
[2025-10-10 19:11:49] 2025-10-11 02:11:49,196 [wrapper] cleanup supervisor_pilot 3401304 3401299
[2025-10-10 19:11:49] 2025-10-11 02:11:49,208 [wrapper] Test setup, not cleaning
[2025-10-10 19:11:49] 2025-10-11 02:11:49,214 [wrapper] apfmon messages muted
[2025-10-10 19:11:49] 2025-10-11 02:11:49,225 [wrapper] ==== wrapper stdout END ====
[2025-10-10 19:11:49] 2025-10-11 02:11:49,233 [wrapper] ==== wrapper stderr END ====
[2025-10-10 19:11:49]  *** Error codes and diagnostics ***
[2025-10-10 19:11:49]     "exeErrorCode": 65,
[2025-10-10 19:11:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 19:11:49]     "pilotErrorCode": 1305,
[2025-10-10 19:11:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 19:11:49]  *** Listing of results directory ***
[2025-10-10 19:11:49] total 218504
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc    557409 Oct 10 16:32 pilot3.tar.gz
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc      5112 Oct 10 16:33 queuedata.json
[2025-10-10 19:11:49] -rwx------. 1 boinc boinc     36292 Oct 10 16:34 runpilot2-wrapper.sh
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc       100 Oct 10 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 19:11:49] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 19:04 run_atlas
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc       105 Oct 10 19:04 job.xml
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc      6444 Oct 10 19:04 init_data.xml
[2025-10-10 19:11:49] -rw-r--r--. 2 boinc boinc 219598280 Oct 10 19:04 EVNT.46676267._001907.pool.root.1
[2025-10-10 19:11:49] -rw-r--r--. 2 boinc boinc     15120 Oct 10 19:04 start_atlas.sh
[2025-10-10 19:11:49] drwxrwx--x. 2 boinc boinc      4096 Oct 10 19:04 shared
[2025-10-10 19:11:49] -rw-r--r--. 2 boinc boinc    569685 Oct 10 19:04 input.tar.gz
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc         0 Oct 10 19:04 boinc_lockfile
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc      2549 Oct 10 19:04 pandaJob.out
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc    975517 Oct 10 19:05 agis_schedconf.cvmfs.json
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc   1560580 Oct 10 19:05 agis_ddmendpoints.agis.ALL.json
[2025-10-10 19:11:49] drwx------. 5 boinc boinc      4096 Oct 10 19:05 pilot3
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc       525 Oct 10 19:08 boinc_task_state.xml
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc       989 Oct 10 19:08 memory_monitor_summary.json
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc     23452 Oct 10 19:08 log.46676269._047231.job.log.tgz.1
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc      8441 Oct 10 19:11 heartbeat.json
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc      8192 Oct 10 19:11 boinc_mmap_file
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc        23 Oct 10 19:11 wrapper_checkpoint.txt
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc        95 Oct 10 19:11 pilot_heartbeat.json
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc       823 Oct 10 19:11 pilotlog.txt
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc    105413 Oct 10 19:11 log.46676269._047231.job.log.1
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc       188 Oct 10 19:11 output.list
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc       620 Oct 10 19:11 runtime_log
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc    143360 Oct 10 19:11 result.tar.gz
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc      8526 Oct 10 19:11 runtime_log.err
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc       647 Oct 10 19:11 drlNDm4nbR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFmeNDmOaZSwm.diag
[2025-10-10 19:11:49] -rw-r--r--. 1 boinc boinc     21906 Oct 10 19:11 stderr.txt
[2025-10-10 19:11:49] No HITS result produced
[2025-10-10 19:11:49]  *** Contents of shared directory: ***
[2025-10-10 19:11:49] total 215172
[2025-10-10 19:11:49] -rw-r--r--. 2 boinc boinc 219598280 Oct 10 19:04 ATLAS.root_0
[2025-10-10 19:11:49] -rw-r--r--. 2 boinc boinc     15120 Oct 10 19:04 start_atlas.sh
[2025-10-10 19:11:49] -rw-r--r--. 2 boinc boinc    569685 Oct 10 19:04 input.tar.gz
[2025-10-10 19:11:49] -rw-------. 1 boinc boinc    143360 Oct 10 19:11 result.tar.gz
19:11:51 (3397246): run_atlas exited; CPU time 31.730395
19:11:51 (3397246): called boinc_finish(0)

</stderr_txt>
]]>

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