Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:38:26 (1995286): wrapper (7.7.26015): starting
20:38:26 (1995286): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 20:38:26] Arguments: --nthreads 4
[2025-10-11 20:38:26] Threads: 4
[2025-10-11 20:38:26] Checking for CVMFS
[2025-10-11 20:38:26] No cvmfs_config command found, will try listing directly
[2025-10-11 20:38:26] CVMFS is ok
[2025-10-11 20:38:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:38:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:38:26] Further information can be found at the LHC@home message board.
[2025-10-11 20:38:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:38:26] Checking for apptainer binary...
[2025-10-11 20:38:26] which: no apptainer in ((null))
[2025-10-11 20:38:26] apptainer is not installed, using version from CVMFS
[2025-10-11 20:38:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:38:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-11 20:38:26] apptainer works
[2025-10-11 20:38:26] Set ATHENA_PROC_NUMBER=4
[2025-10-11 20:38:26] Set ATHENA_CORE_NUMBER=4
[2025-10-11 20:38:26] Starting ATLAS job with PandaID=6837732250
[2025-10-11 20:38:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:11:12 (2251760): wrapper (7.7.26015): starting
23:11:12 (2251760): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 23:11:12] Arguments: --nthreads 4
[2025-10-11 23:11:12] Threads: 4
[2025-10-11 23:11:12] This job has been restarted, cleaning up previous attempt
[2025-10-11 23:11:12] Checking for CVMFS
[2025-10-11 23:11:12] No cvmfs_config command found, will try listing directly
[2025-10-11 23:11:12] CVMFS is ok
[2025-10-11 23:11:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:11:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:11:12] Further information can be found at the LHC@home message board.
[2025-10-11 23:11:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:11:12] Checking for apptainer binary...
[2025-10-11 23:11:12] which: no apptainer in ((null))
[2025-10-11 23:11:12] apptainer is not installed, using version from CVMFS
[2025-10-11 23:11:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:11:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-11 23:11:12] apptainer works
[2025-10-11 23:11:12] Set ATHENA_PROC_NUMBER=4
[2025-10-11 23:11:12] Set ATHENA_CORE_NUMBER=4
[2025-10-11 23:11:12] Starting ATLAS job with PandaID=6837732250
[2025-10-11 23:11:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:54:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:54:42] 2025-10-12 00:18:40,024 | INFO     | monitor loop #810: job 0:6837732250 is in state 'finished'
[2025-10-12 02:54:42] 2025-10-12 00:18:40,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:54:42] 2025-10-12 00:18:41,606 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 02:54:42] 2025-10-12 00:18:41,617 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2616.3835625
[2025-10-12 02:54:42] 2025-10-12 00:18:41,630 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6837732250/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 02:54:42] 2025-10-12 00:18:41,630 | INFO     | extracted standard info from prmon json
[2025-10-12 02:54:42] 2025-10-12 00:18:41,631 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 02:54:42] 2025-10-12 00:18:41,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 02:54:42] 2025-10-12 00:18:41,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 02:54:42] 2025-10-12 00:18:41,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 02:54:42] 2025-10-12 00:18:41,635 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:54:42] 2025-10-12 00:18:41,636 | INFO     | sum of square deviations: 1931608310.0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,637 | INFO     | sum of deviations: 21190237828.0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,637 | INFO     | mean x: 1760222691.5
[2025-10-12 02:54:42] 2025-10-12 00:18:41,637 | INFO     | mean y: 2349470.75
[2025-10-12 02:54:42] 2025-10-12 00:18:41,637 | INFO     | -- intersect: -19307744232.008648
[2025-10-12 02:54:42] 2025-10-12 00:18:41,637 | INFO     | intersect: -19307744232.008648
[2025-10-12 02:54:42] 2025-10-12 00:18:41,638 | INFO     | chi2: 1.2024319192500141
[2025-10-12 02:54:42] 2025-10-12 00:18:41,638 | INFO     | sum of square deviations: 1778377530.0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,639 | INFO     | sum of deviations: 20533336575.000004
[2025-10-12 02:54:42] 2025-10-12 00:18:41,639 | INFO     | mean x: 1760222539.0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,639 | INFO     | mean y: 2348816.592178771
[2025-10-12 02:54:42] 2025-10-12 00:18:41,639 | INFO     | -- intersect: -20321368296.60598
[2025-10-12 02:54:42] 2025-10-12 00:18:41,639 | INFO     | intersect: -20321368296.60598
[2025-10-12 02:54:42] 2025-10-12 00:18:41,640 | INFO     | chi2: 1.2031510205874556
[2025-10-12 02:54:42] 2025-10-12 00:18:41,640 | INFO     | current chi2=1.2031510205874556 (change=-0.05980391288098742 %)
[2025-10-12 02:54:42] 2025-10-12 00:18:41,640 | INFO     | right removable region: 178
[2025-10-12 02:54:42] 2025-10-12 00:18:41,640 | INFO     | sum of square deviations: 1778377530.0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,641 | INFO     | sum of deviations: 394111666.9999999
[2025-10-12 02:54:42] 2025-10-12 00:18:41,641 | INFO     | mean x: 1760222844.0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,642 | INFO     | mean y: 2369858.5754189943
[2025-10-12 02:54:42] 2025-10-12 00:18:41,642 | INFO     | -- intersect: -387718493.10338384
[2025-10-12 02:54:42] 2025-10-12 00:18:41,642 | INFO     | intersect: -387718493.10338384
[2025-10-12 02:54:42] 2025-10-12 00:18:41,642 | INFO     | chi2: 0.005184726558230878
[2025-10-12 02:54:42] 2025-10-12 00:18:41,642 | INFO     | current chi2=0.005184726558230878 (change=99.56881329618523 %)
[2025-10-12 02:54:42] 2025-10-12 00:18:41,642 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 02:54:42] 2025-10-12 00:18:41,643 | INFO     | sum of deviations: 715042457.5
[2025-10-12 02:54:42] 2025-10-12 00:18:41,644 | INFO     | mean x: 1760222996.5
[2025-10-12 02:54:42] 2025-10-12 00:18:41,644 | INFO     | mean y: 2369516.120689655
[2025-10-12 02:54:42] 2025-10-12 00:18:41,644 | INFO     | -- intersect: -768157191.1222898
[2025-10-12 02:54:42] 2025-10-12 00:18:41,644 | INFO     | intersect: -768157191.1222898
[2025-10-12 02:54:42] 2025-10-12 00:18:41,644 | INFO     | chi2: 0.004923118190144556
[2025-10-12 02:54:42] 2025-10-12 00:18:41,644 | INFO     | current chi2=0.004923118190144556 (change=5.04575053569628 %)
[2025-10-12 02:54:42] 2025-10-12 00:18:41,644 | INFO     | left removable region: 20
[2025-10-12 02:54:42] 2025-10-12 00:18:41,645 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 02:54:42] 2025-10-12 00:18:41,646 | INFO     | sum of deviations: 2288209429.9999995
[2025-10-12 02:54:42] 2025-10-12 00:18:41,646 | INFO     | mean x: 1760223118.5
[2025-10-12 02:54:42] 2025-10-12 00:18:41,646 | INFO     | mean y: 2367317.481012658
[2025-10-12 02:54:42] 2025-10-12 00:18:41,646 | INFO     | -- intersect: -3290931999.2218294
[2025-10-12 02:54:42] 2025-10-12 00:18:41,646 | INFO     | intersect: -3290931999.2218294
[2025-10-12 02:54:42] 2025-10-12 00:18:41,647 | INFO     | chi2: 0.0018247379528404904
[2025-10-12 02:54:42] 2025-10-12 00:18:41,647 | INFO     | -- intersect: -3290931999.2218294
[2025-10-12 02:54:42] 2025-10-12 00:18:41,647 | INFO     | current memory leak: 1.87 B/s (using 158 data points, chi2=0.00)
[2025-10-12 02:54:42] 2025-10-12 00:18:41,647 | INFO     | could have reported an average CPU frequency of 2598 MHz (10 samples)
[2025-10-12 02:54:42] 2025-10-12 00:18:41,648 | INFO     | ..............................
[2025-10-12 02:54:42] 2025-10-12 00:18:41,648 | INFO     | . Timing measurements:
[2025-10-12 02:54:42] 2025-10-12 00:18:41,648 | INFO     | . get job = 0 s
[2025-10-12 02:54:42] 2025-10-12 00:18:41,648 | INFO     | . initial setup = 1 s
[2025-10-12 02:54:42] 2025-10-12 00:18:41,648 | INFO     | . payload setup = 6 s
[2025-10-12 02:54:42] 2025-10-12 00:18:41,648 | INFO     | . stage-in = 0 s
[2025-10-12 02:54:42] 2025-10-12 00:18:41,648 | INFO     | . payload execution = 11204 s
[2025-10-12 02:54:42] 2025-10-12 00:18:41,648 | INFO     | . stage-out = 1 s
[2025-10-12 02:54:42] 2025-10-12 00:18:41,648 | INFO     | . log creation = 0 s
[2025-10-12 02:54:42] 2025-10-12 00:18:41,648 | INFO     | ..............................
[2025-10-12 02:54:42] 2025-10-12 00:18:41,755 | INFO     | 
[2025-10-12 02:54:42] 2025-10-12 00:18:41,755 | INFO     | job summary report
[2025-10-12 02:54:42] 2025-10-12 00:18:41,755 | INFO     | --------------------------------------------------
[2025-10-12 02:54:42] 2025-10-12 00:18:41,755 | INFO     | PanDA job id: 6837732250
[2025-10-12 02:54:42] 2025-10-12 00:18:41,755 | INFO     | task id: 46676269
[2025-10-12 02:54:42] 2025-10-12 00:18:41,755 | INFO     | errors: (none)
[2025-10-12 02:54:42] 2025-10-12 00:18:41,755 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | pilot state: finished 
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | transexitcode: 0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | exeerrorcode: 0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | exeerrordiag: 
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | exitcode: 0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | exitmsg: OK
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | cpuconsumptiontime: 42986 s
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | nevents: 400
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | neventsw: 0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | pid: 2262678
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | pgrp: 2262678
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | corecount: 4
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | event service: False
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | sizes: {0: 2348646, 1: 2348845, 5: 2349107, 11: 2349163, 11214: 2378497, 11215: 2387517, 11217: 2387729, 11223: 2387923}
[2025-10-12 02:54:42] 2025-10-12 00:18:41,756 | INFO     | --------------------------------------------------
[2025-10-12 02:54:42] 2025-10-12 00:18:41,757 | INFO     | 
[2025-10-12 02:54:42] 2025-10-12 00:18:41,757 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-12 02:54:42] 2025-10-12 00:18:41,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,780 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:54:42] 2025-10-12 00:18:41,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,780 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:54:42] 2025-10-12 00:18:41,780 | INFO     | job 6837732250 has completed (purged errors)
[2025-10-12 02:54:42] 2025-10-12 00:18:41,780 | INFO     | overall cleanup function is called
[2025-10-12 02:54:42] 2025-10-12 00:18:42,788 | INFO     | --- collectZombieJob: --- 10, [2262678]
[2025-10-12 02:54:42] 2025-10-12 00:18:42,789 | INFO     | zombie collector waiting for pid 2262678
[2025-10-12 02:54:42] 2025-10-12 00:18:42,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:54:42] 2025-10-12 00:18:42,789 | INFO     | collected zombie processes
[2025-10-12 02:54:42] 2025-10-12 00:18:42,789 | INFO     | will attempt to kill all subprocesses of pid=2262678
[2025-10-12 02:54:42] 2025-10-12 00:18:43,205 | INFO     | process IDs to be killed: [2262678] (in reverse order)
[2025-10-12 02:54:42] 2025-10-12 00:18:43,321 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:54:42] 2025-10-12 00:18:43,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:54:42] 2025-10-12 00:18:43,334 | INFO     | did not find any defunct processes belonging to 2262678
[2025-10-12 02:54:42] 2025-10-12 00:18:43,346 | INFO     | did not find any defunct processes belonging to 2262678
[2025-10-12 02:54:42] 2025-10-12 00:18:43,347 | INFO     | ready for new job
[2025-10-12 02:54:42] 2025-10-12 00:18:43,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:54:42] 2025-10-12 00:18:43,349 | INFO     | ***************************************
[2025-10-12 02:54:42] 2025-10-12 00:18:43,349 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:54:42] 2025-10-12 00:18:43,349 | INFO     | ***************************************
[2025-10-12 02:54:42] 2025-10-12 00:18:43,349 | INFO     | 
[2025-10-12 02:54:42] 2025-10-12 00:18:43,353 | INFO     | architecture information:
[2025-10-12 02:54:42] 2025-10-12 00:18:43,354 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:54:42] 2025-10-12 00:18:43,370 | INFO     | cat /etc/os-release:
[2025-10-12 02:54:42] NAME="CentOS Linux"
[2025-10-12 02:54:42] VERSION="7 (Core)"
[2025-10-12 02:54:42] ID="centos"
[2025-10-12 02:54:42] ID_LIKE="rhel fedora"
[2025-10-12 02:54:42] VERSION_ID="7"
[2025-10-12 02:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:54:42] ANSI_COLOR="0;31"
[2025-10-12 02:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:54:42] HOME_URL="https://www.centos.org/"
[2025-10-12 02:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:54:42] 
[2025-10-12 02:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:54:42] 
[2025-10-12 02:54:42] 2025-10-12 00:18:43,371 | INFO     | ***************************************
[2025-10-12 02:54:42] 2025-10-12 00:18:43,874 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-12 02:54:42] 2025-10-12 00:18:43,889 | INFO     | sufficient remaining disk space (695362125824 B)
[2025-10-12 02:54:42] 2025-10-12 00:18:43,890 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:54:42] 2025-10-12 00:18:43,890 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:54:42] 2025-10-12 00:18:43,890 | INFO     | update_server=False
[2025-10-12 02:54:42] 2025-10-12 00:18:43,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:54:42] 2025-10-12 00:18:43,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:54:42] 2025-10-12 00:18:43,891 | INFO     | aborting loop
[2025-10-12 02:54:42] 2025-10-12 00:18:44,416 | INFO     | all payload control threads have been joined
[2025-10-12 02:54:42] 2025-10-12 00:18:44,464 | INFO     | all job control threads have been joined
[2025-10-12 02:54:42] 2025-10-12 00:18:44,786 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:54:42] 2025-10-12 00:18:44,895 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:44,896 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:44,930 | INFO     | all data control threads have been joined
[2025-10-12 02:54:42] 2025-10-12 00:18:45,172 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:45,220 | INFO     | [job] validate thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:45,354 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:45,421 | INFO     | [payload] control thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:45,470 | INFO     | [job] control thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:45,579 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:45,934 | INFO     | [data] control thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:45,940 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:46,034 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:46,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:54:42] 2025-10-12 00:18:46,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:46,473 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:46,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:54:42] 2025-10-12 00:18:46,791 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:47,771 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:18:50,314 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:54:42] 2025-10-12 00:19:11,950 | INFO     | 11240s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 02:54:42] 2025-10-12 00:19:13,448 | INFO     | PID=2255594 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 02:54:42] 2025-10-12 00:19:13,448 | INFO     | .. there are 6 such processes running
[2025-10-12 02:54:42] 2025-10-12 00:19:13,448 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:54:42] 2025-10-12 00:19:13,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:54:42] 2025-10-12 00:19:13,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:54:42] 2025-10-12 00:19:40,763 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:54:42] 2025-10-12 00:19:41,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23448962811712)>', '<ExcThread(monitor, started 23448730437376)>']
[2025-10-12 02:54:42] 2025-10-12 00:19:42,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:54:42] 2025-10-12 00:19:42,593 | INFO     | [monitor] control thread has ended
[2025-10-12 02:54:42] 2025-10-12 00:19:47,023 | INFO     | all workflow threads have been joined
[2025-10-12 02:54:42] 2025-10-12 00:19:47,023 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:54:42] 2025-10-12 00:19:47,024 | INFO     | traces error code: 0
[2025-10-12 02:54:42] 2025-10-12 00:19:47,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:54:42] 2025-10-12 00:19:47,227 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:54:42] 2025-10-12 00:19:47,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:54:42] 2025-10-12 00:19:47,234 [wrapper] pilotpid: 2255594
[2025-10-12 02:54:42] 2025-10-12 00:19:47,237 [wrapper] Pilot exit status: 0
[2025-10-12 02:54:42] 2025-10-12 00:19:47,248 [wrapper] pandaids: 6837732250 6837732250
[2025-10-12 02:54:42] 2025-10-12 00:19:47,326 [wrapper] cleanup supervisor_pilot 2537600 2255595
[2025-10-12 02:54:42] 2025-10-12 00:19:47,329 [wrapper] Test setup, not cleaning
[2025-10-12 02:54:42] 2025-10-12 00:19:47,332 [wrapper] apfmon messages muted
[2025-10-12 02:54:42] 2025-10-12 00:19:47,334 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:54:42] 2025-10-12 00:19:47,337 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:54:42]  *** Error codes and diagnostics ***
[2025-10-12 02:54:42]     "exeErrorCode": 0,
[2025-10-12 02:54:42]     "exeErrorDiag": "",
[2025-10-12 02:54:42]     "pilotErrorCode": 0,
[2025-10-12 02:54:42]     "pilotErrorDiag": "",
[2025-10-12 02:54:42]  *** Listing of results directory ***
[2025-10-12 02:54:42] total 635720
[2025-10-12 02:54:42] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc    557409 Oct 10 22:08 pilot3.tar.gz
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc      5112 Oct 10 22:18 queuedata.json
[2025-10-12 02:54:42] -rwx------ 1 boinc boinc     36292 Oct 10 22:18 runpilot2-wrapper.sh
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc       100 Oct 11 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:54:42] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 20:38 run_atlas
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc       105 Oct 11 20:38 job.xml
[2025-10-12 02:54:42] -rw-r--r-- 3 boinc boinc 223679513 Oct 11 20:38 EVNT.46676267._001801.pool.root.1
[2025-10-12 02:54:42] -rw-r--r-- 3 boinc boinc 223679513 Oct 11 20:38 ATLAS.root_0
[2025-10-12 02:54:42] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:38 start_atlas.sh
[2025-10-12 02:54:42] drwxrwx--x 2 boinc boinc      4096 Oct 11 20:38 shared
[2025-10-12 02:54:42] -rw-r--r-- 2 boinc boinc    569682 Oct 11 20:38 input.tar.gz
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc         0 Oct 11 20:38 boinc_lockfile
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc      2549 Oct 11 23:11 pandaJob.out
[2025-10-12 02:54:42] -rw------- 1 boinc boinc    975528 Oct 11 23:11 agis_schedconf.cvmfs.json
[2025-10-12 02:54:42] -rw------- 1 boinc boinc 195766309 Oct 12 02:17 HITS.46676269._044502.pool.root.1
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc       529 Oct 12 02:18 boinc_task_state.xml
[2025-10-12 02:54:42] -rw------- 1 boinc boinc        97 Oct 12 02:18 pilot_heartbeat.json
[2025-10-12 02:54:42] -rw------- 1 boinc boinc      1046 Oct 12 02:18 memory_monitor_summary.json
[2025-10-12 02:54:42] -rw------- 1 boinc boinc   1560580 Oct 12 02:18 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:54:42] -rw------- 1 boinc boinc    373597 Oct 12 02:18 log.46676269._044502.job.log.tgz.1
[2025-10-12 02:54:42] -rw------- 1 boinc boinc      7830 Oct 12 02:18 heartbeat.json
[2025-10-12 02:54:42] -rw------- 1 boinc boinc      4949 Oct 12 02:19 pilotlog.txt
[2025-10-12 02:54:42] -rw------- 1 boinc boinc   1595956 Oct 12 02:19 log.46676269._044502.job.log.1
[2025-10-12 02:54:42] -rw------- 1 boinc boinc       357 Oct 12 02:19 output.list
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc       620 Oct 12 02:19 runtime_log
[2025-10-12 02:54:42] -rw------- 1 boinc boinc   1986560 Oct 12 02:19 result.tar.gz
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc      9147 Oct 12 02:19 runtime_log.err
[2025-10-12 02:54:42] -rw------- 1 boinc boinc       791 Oct 12 02:19 RbyLDmmkYR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGLeNDml1nuWm.diag
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc      6640 Oct 12 02:38 init_data.xml
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc        26 Oct 12 02:54 wrapper_checkpoint.txt
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc      8192 Oct 12 02:54 boinc_mmap_file
[2025-10-12 02:54:42] -rw-r--r-- 1 boinc boinc     22860 Oct 12 02:54 stderr.txt
[2025-10-12 02:54:42] HITS file was successfully produced:
[2025-10-12 02:54:42] -rw------- 1 boinc boinc 195766309 Oct 12 02:17 shared/HITS.pool.root.1
[2025-10-12 02:54:42]  *** Contents of shared directory: ***
[2025-10-12 02:54:42] total 412144
[2025-10-12 02:54:42] -rw-r--r-- 3 boinc boinc 223679513 Oct 11 20:38 ATLAS.root_0
[2025-10-12 02:54:42] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:38 start_atlas.sh
[2025-10-12 02:54:42] -rw-r--r-- 2 boinc boinc    569682 Oct 11 20:38 input.tar.gz
[2025-10-12 02:54:42] -rw------- 1 boinc boinc 195766309 Oct 12 02:17 HITS.pool.root.1
[2025-10-12 02:54:42] -rw------- 1 boinc boinc   1986560 Oct 12 02:19 result.tar.gz
02:54:44 (2251760): run_atlas exited; CPU time 43464.908481
02:54:44 (2251760): called boinc_finish(0)

</stderr_txt>
]]>

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