Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-11 08:13:28 (10700): vboxwrapper version 26210
2025-10-11 08:13:28 (10700): BOINC client version: 7.16.11
2025-10-11 08:13:28 (10700): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-10-11 08:13:28 (10700): Successfully copied 'init_data.xml' to the shared directory.
2025-10-11 08:13:29 (10700): Create VM. (boinc_5078708f9006067d, slot#7)
2025-10-11 08:13:29 (10700): Setting Memory Size for VM. (4800MB)
2025-10-11 08:13:29 (10700): Setting CPU Count for VM. (8)
2025-10-11 08:13:30 (10700): Setting Chipset Options for VM.
2025-10-11 08:13:30 (10700): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-11 08:13:30 (10700): Setting Boot Options for VM.
2025-10-11 08:13:31 (10700): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-11 08:13:31 (10700): Enabling VM Network Access.
2025-10-11 08:13:31 (10700): Disabling USB Support for VM.
2025-10-11 08:13:31 (10700): Disabling COM Port Support for VM.
2025-10-11 08:13:32 (10700): Disabling LPT Port Support for VM.
2025-10-11 08:13:32 (10700): Disabling Audio Support for VM.
2025-10-11 08:13:32 (10700): Disabling Clipboard Support for VM.
2025-10-11 08:13:32 (10700): Disabling Drag and Drop Support for VM.
2025-10-11 08:13:33 (10700): Adding storage controller(s) to VM.
2025-10-11 08:13:33 (10700): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-11 08:13:33 (10700): Adding VirtualBox Guest Additions to VM.
2025-10-11 08:13:34 (10700): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-11 08:13:34 (10700): forwarding host port 56640 to guest port 80
2025-10-11 08:13:34 (10700): Enabling remote desktop for VM.
2025-10-11 08:13:34 (10700): Required extension pack not installed, remote desktop not enabled.
2025-10-11 08:13:34 (10700): Enabling shared directory for VM.
2025-10-11 08:13:35 (10700): Starting VM using VBoxManage interface. (boinc_5078708f9006067d, slot#7)
2025-10-11 08:13:38 (10700): Successfully started VM. (PID = '14948')
2025-10-11 08:13:38 (10700): Reporting VM Process ID to BOINC.
2025-10-11 08:13:38 (10700): Guest Log: BIOS: VirtualBox 6.1.12
2025-10-11 08:13:38 (10700): Guest Log: CPUID EDX: 0x178bfbff
2025-10-11 08:13:38 (10700): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-11 08:13:38 (10700): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-11 08:13:38 (10700): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-11 08:13:38 (10700): Detected: Web Application Enabled (http://localhost:56640)
2025-10-11 08:13:38 (10700): Preference change detected
2025-10-11 08:13:38 (10700): Setting CPU throttle for VM. (100%)
2025-10-11 08:13:38 (10700): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 08:13:40 (10700): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-11 08:13:40 (10700): Guest Log: BIOS: Booting from Hard Disk...
2025-10-11 08:13:42 (10700): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-11 08:13:42 (10700): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-11 08:13:42 (10700): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-11 08:13:47 (10700): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-11 08:13:47 (10700): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-11 08:13:50 (10700): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-11 08:13:50 (10700): Guest Log: 00:00:00.000087 main     Log opened 2025-10-11T08:13:48.704644000Z
2025-10-11 08:13:50 (10700): Guest Log: 00:00:00.000155 main     OS Product: Linux
2025-10-11 08:13:50 (10700): Guest Log: 00:00:00.000174 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-11 08:13:50 (10700): Guest Log: 00:00:00.000188 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-11 08:13:50 (10700): Guest Log: 00:00:00.000203 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-11 08:13:50 (10700): Guest Log: 00:00:00.000203 main     Process ID: 1367
2025-10-11 08:13:50 (10700): Guest Log: 00:00:00.000203 main     Package type: LINUX_64BITS_GENERIC
2025-10-11 08:13:50 (10700): Guest Log: 00:00:00.000736 main     5.2.32 r132073 started. Verbose level = 0
2025-10-11 08:13:50 (10700): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-11 08:13:50 (10700): Guest Log: [INFO] Mounting shared directory
2025-10-11 08:13:50 (10700): Guest Log: [INFO] Checking for init_data.xml
2025-10-11 08:13:56 (10700): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 08:13:56 (10700): Guest Log: [INFO] Detected branch: prod
2025-10-11 08:13:56 (10700): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 08:13:56 (10700): Guest Log: Copying input files
2025-10-11 08:13:57 (10700): Guest Log: Copied input files into RunAtlas.
2025-10-11 08:13:57 (10700): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-11 08:13:57 (10700): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-11 08:13:57 (10700): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-11 08:13:57 (10700): Guest Log: Further information can be found at the LHC@home message board.
2025-10-11 08:14:00 (10700): Guest Log: 00:00:10.003646 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 578 913 000ns (GuestNow=1 760 184 840 285 037 000 ns GuestLast=1 760 170 428 706 124 000 ns fSetTimeLastLoop=true )
2025-10-11 08:14:29 (10700): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 08:14:30 (10700): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 08:14:30 (10700): Guest Log: 2.6.3.0 1646 0 32212 151584 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-11 08:14:30 (10700): Guest Log: copied the webapp to /var/www
2025-10-11 08:14:30 (10700): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-11 08:14:30 (10700): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-11 08:14:30 (10700): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 08:14:30 (10700): Guest Log:  *** Starting ATLAS job. (PandaID=6837669513 taskID=46676269) ***
2025-10-11 09:32:14 (10700): Guest Log:  *** Job finished ***
2025-10-11 09:32:14 (10700): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:03,821 | INFO     | [monitor] cgroup control has ended
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:04,727 | INFO     | job.realtimelogging is not enabled
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:05,863 | INFO     | [payload] run_realtimelog thread has finished
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:06,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760504444736)>', '<ExcThread(monitor, started 139759594739456)>']
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:07,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:07,406 | INFO     | [monitor] control thread has ended
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,453 | INFO     | all workflow threads have been joined
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,453 | INFO     | end of generic workflow (traces error code: 0)
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,454 | INFO     | traces error code: 0
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,503 [wrapper] ==== pilot stdout END ====
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,506 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,509 [wrapper] pilotpid: 6077
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,512 [wrapper] Pilot exit status: 0
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,571 [wrapper] pandaids: 6837669513
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,595 [wrapper] cleanup supervisor_pilot 25024 6078
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,598 [wrapper] Test setup, not cleaning
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,601 [wrapper] apfmon messages muted
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,604 [wrapper] ==== wrapper stdout END ====
2025-10-11 09:32:14 (10700): Guest Log: 2025-10-11 13:32:11,606 [wrapper] ==== wrapper stderr END ====
2025-10-11 09:32:14 (10700): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 09:32:14 (10700): Guest Log:     "exeErrorCode": 0,
2025-10-11 09:32:14 (10700): Guest Log:     "exeErrorDiag": "",
2025-10-11 09:32:14 (10700): Guest Log:     "pilotErrorCode": 0,
2025-10-11 09:32:14 (10700): Guest Log:     "pilotErrorDiag": "",
2025-10-11 09:32:14 (10700): Guest Log:  *** Listing of results directory ***
2025-10-11 09:32:14 (10700): Guest Log: total 195992
2025-10-11 09:32:14 (10700): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 16:45 runpilot2-wrapper.sh
2025-10-11 09:32:14 (10700): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 16:45 pilot3.tar.gz
2025-10-11 09:32:14 (10700): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 16:45 queuedata.json
2025-10-11 09:32:14 (10700): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 11 12:13 start_atlas.sh
2025-10-11 09:32:14 (10700): Guest Log: -rwxr-xr-x. 1 atlas atlas    569674 Oct 11 12:13 input.tar.gz
2025-10-11 09:32:14 (10700): Guest Log: -rwxr-xr-x. 1 atlas atlas      9588 Oct 11 12:13 init_data.xml
2025-10-11 09:32:14 (10700): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 11 12:13 EVNT.46676267._001694.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 09:32:14 (10700): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 11 12:14 pandaJob.out
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas    975504 Oct 11 12:14 agis_schedconf.cvmfs.json
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 12:14 agis_ddmendpoints.agis.ALL.json
2025-10-11 09:32:14 (10700): Guest Log: drwx------. 5 atlas atlas      4096 Oct 11 12:14 pilot3
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas 194899630 Oct 11 13:31 HITS.46676269._041808.pool.root.1
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas        95 Oct 11 13:31 pilot_heartbeat.json
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas      1026 Oct 11 13:31 memory_monitor_summary.json
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas    333591 Oct 11 13:31 log.46676269._041808.job.log.tgz.1
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas      7796 Oct 11 13:31 heartbeat.json
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas      4684 Oct 11 13:32 pilotlog.txt
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas    645931 Oct 11 13:32 log.46676269._041808.job.log.1
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 13:32 output.list
2025-10-11 09:32:14 (10700): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 13:32 runtime_log
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas   1003520 Oct 11 13:32 result.tar.gz
2025-10-11 09:32:14 (10700): Guest Log: -rw-r--r--. 1 atlas atlas      8624 Oct 11 13:32 runtime_log.err
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas       649 Oct 11 13:32 9FWKDmqQVR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3GQMDmtAcusm.diag
2025-10-11 09:32:14 (10700): Guest Log: Looking for outputfile HITS.46676269._041808.pool.root.1
2025-10-11 09:32:14 (10700): Guest Log: HITS file was successfully produced
2025-10-11 09:32:14 (10700): Guest Log: -rw-------. 1 atlas atlas 194899630 Oct 11 13:31 /home/atlas/RunAtlas/HITS.46676269._041808.pool.root.1
2025-10-11 09:32:14 (10700): Guest Log: Successfully finished the ATLAS job!
2025-10-11 09:32:14 (10700): Guest Log: Copying the results back to the shared directory!
2025-10-11 09:32:14 (10700): Guest Log:  *** Contents of shared directory: ***
2025-10-11 09:32:14 (10700): Guest Log: total 405672
2025-10-11 09:32:14 (10700): Guest Log: -rwxrwxrwx. 1 root root 218899959 Oct 11 12:13 ATLAS.root_0
2025-10-11 09:32:14 (10700): Guest Log: -rwxrwxrwx. 1 root root 194899630 Oct 11  2025 HITS.pool.root.1
2025-10-11 09:32:14 (10700): Guest Log: -rwxrwxrwx. 1 root root      9588 Oct 11 12:13 init_data.xml
2025-10-11 09:32:14 (10700): Guest Log: -rwxrwxrwx. 1 root root    569674 Oct 11 01:49 input.tar.gz
2025-10-11 09:32:14 (10700): Guest Log: -rwxrwxrwx. 1 root root   1003520 Oct 11  2025 result.tar.gz
2025-10-11 09:32:14 (10700): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 11 01:49 start_atlas.sh
2025-10-11 09:32:14 (10700): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 09:32:14 (10700): VM Completion File Detected.
2025-10-11 09:32:14 (10700): Powering off VM.
2025-10-11 09:32:15 (10700): Successfully stopped VM.
2025-10-11 09:32:15 (10700): Deregistering VM. (boinc_5078708f9006067d, slot#7)
2025-10-11 09:32:15 (10700): Removing network bandwidth throttle group from VM.
2025-10-11 09:32:15 (10700): Removing VM from VirtualBox.
2025-10-11 09:32:20 (10700): called boinc_finish(0)

</stderr_txt>
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