Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
23:38:04 (177889): wrapper (7.7.26015): starting
23:38:04 (177889): wrapper: running run_atlas (--nthreads 6)
[2025-10-11 23:38:04] Arguments: --nthreads 6
[2025-10-11 23:38:04] Threads: 6
[2025-10-11 23:38:04] Checking for CVMFS
[2025-10-11 23:38:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:38:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:38:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:38:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:38:04] 2.11.5.0 4257 98 51872 151597 2 57 2705512 4194304 118 130560 0 481949 99.994 8080 506 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.3.250:3128 1
[2025-10-11 23:38:04] CVMFS is ok
[2025-10-11 23:38:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:38:04] Checking for apptainer binary...
[2025-10-11 23:38:04] apptainer is not installed, using version from CVMFS
[2025-10-11 23:38:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:38:04] boinc-b450f
[2025-10-11 23:38:04] apptainer works
[2025-10-11 23:38:04] Set ATHENA_PROC_NUMBER=6
[2025-10-11 23:38:04] Set ATHENA_CORE_NUMBER=6
[2025-10-11 23:38:04] Starting ATLAS job with PandaID=6837631287
[2025-10-11 23:38:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:48:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:48:30]  mtime=0
[2025-10-12 00:48:30]  protocol_id=None
[2025-10-12 00:48:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 00:48:30]  replicas=None
[2025-10-12 00:48:30]  scope=mc23_13p6TeV
[2025-10-12 00:48:30]  status=None
[2025-10-12 00:48:30]  status_code=0
[2025-10-12 00:48:30]  storage_token=
[2025-10-12 00:48:30]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6837631287/log.46676269._039765.job.log.tgz.1
[2025-10-12 00:48:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/96/log.46676269._039765.job.log.tgz.1
[2025-10-12 00:48:30]  workdir=None
[2025-10-12 00:48:30] ]
[2025-10-12 00:48:30] 2025-10-11 22:47:26,230 | INFO     | transferring file log.46676269._039765.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6837631287/log.46676269._039765.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 00:48:30] 2025-10-11 22:47:26,230 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6837631287/log.46676269._039765.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.466762
[2025-10-12 00:48:30] 2025-10-11 22:47:26,238 | INFO     | adding to output.list: log.46676269._039765.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/96/log.46676269._039765.job.log.tg
[2025-10-12 00:48:30] 2025-10-11 22:47:26,238 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 00:48:30] 2025-10-11 22:47:26,238 | INFO     | summary of transferred files:
[2025-10-12 00:48:30] 2025-10-11 22:47:26,238 | INFO     |  -- lfn=log.46676269._039765.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 00:48:30] 2025-10-11 22:47:26,238 | INFO     | stage-out finished correctly
[2025-10-12 00:48:30] 2025-10-11 22:47:26,977 | INFO     | time since job start (4149s) is within the limit (172800.0s)
[2025-10-12 00:48:30] 2025-10-11 22:47:27,669 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 00:48:30] 2025-10-11 22:47:27,834 | INFO     | monitor loop #318: job 0:6837631287 is in state 'finished'
[2025-10-12 00:48:30] 2025-10-11 22:47:27,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:48:30] 2025-10-11 22:47:28,983 | INFO     | time since job start (4151s) is within the limit (172800.0s)
[2025-10-12 00:48:30] 2025-10-11 22:47:29,250 | INFO     | job 6837631287 has state=finished
[2025-10-12 00:48:30] 2025-10-11 22:47:29,250 | INFO     | preparing for final server update for job 6837631287 in state='finished'
[2025-10-12 00:48:30] 2025-10-11 22:47:29,250 | INFO     | this job has now completed (state=finished)
[2025-10-12 00:48:30] 2025-10-11 22:47:29,251 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 00:48:30] 2025-10-11 22:47:29,251 | INFO     | log transfer has been attempted: DONE
[2025-10-12 00:48:30] 2025-10-11 22:47:29,251 | INFO     | job 6837631287 has finished - writing final server update
[2025-10-12 00:48:30] 2025-10-11 22:47:29,251 | INFO     | total number of processed events: 400 (read)
[2025-10-12 00:48:30] 2025-10-11 22:47:29,252 | INFO     | executing command: lscpu
[2025-10-12 00:48:30] 2025-10-11 22:47:29,261 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 00:48:30] 2025-10-11 22:47:30,335 | INFO     | monitor loop #319: job 0:6837631287 is in state 'finished'
[2025-10-12 00:48:30] 2025-10-11 22:47:30,335 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:48:30] 2025-10-11 22:47:30,491 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 00:48:30] 2025-10-11 22:47:30,493 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3997.889666666666
[2025-10-12 00:48:30] 2025-10-11 22:47:30,494 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6837631287/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:48:30] 2025-10-11 22:47:30,494 | INFO     | extracted standard info from prmon json
[2025-10-12 00:48:30] 2025-10-11 22:47:30,494 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:48:30] 2025-10-11 22:47:30,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:48:30] 2025-10-11 22:47:30,494 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:48:30] 2025-10-11 22:47:30,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:48:30] 2025-10-11 22:47:30,495 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:48:30] 2025-10-11 22:47:30,495 | INFO     | sum of square deviations: 70364110.0
[2025-10-12 00:48:30] 2025-10-11 22:47:30,495 | INFO     | sum of deviations: -3342769134.0
[2025-10-12 00:48:30] 2025-10-11 22:47:30,495 | INFO     | mean x: 1760220849.0
[2025-10-12 00:48:30] 2025-10-11 22:47:30,495 | INFO     | mean y: 2471694.0
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | -- intersect: 83624817277.00352
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | intersect: 83624817277.00352
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | chi2: 0.013771307050968934
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | -- intersect: 83624817277.00352
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | current memory leak: -47.51 B/s (using 61 data points, chi2=0.01)
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | could have reported an average CPU frequency of 4048 MHz (6 samples)
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | ..............................
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | . Timing measurements:
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | . get job = 0 s
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | . initial setup = 9 s
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | . payload setup = 1 s
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | . stage-in = 0 s
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | . payload execution = 4129 s
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | . stage-out = 0 s
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | . log creation = 0 s
[2025-10-12 00:48:30] 2025-10-11 22:47:30,496 | INFO     | ..............................
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | 
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | job summary report
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | --------------------------------------------------
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | PanDA job id: 6837631287
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | task id: 46676269
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | errors: (none)
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | pilot state: finished 
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | transexitcode: 0
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | exeerrorcode: 0
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | exeerrordiag: 
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | exitcode: 0
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | exitmsg: OK
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | cpuconsumptiontime: 23382 s
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | nevents: 400
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | neventsw: 0
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | pid: 214441
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | pgrp: 214441
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | corecount: 6
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | event service: False
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | sizes: {0: 2348864, 2: 2349126, 11: 2349154, 4134: 2375207, 4136: 2384219, 4138: 2384275, 4141: 2384597}
[2025-10-12 00:48:30] 2025-10-11 22:47:30,535 | INFO     | --------------------------------------------------
[2025-10-12 00:48:30] 2025-10-11 22:47:30,536 | INFO     | 
[2025-10-12 00:48:30] 2025-10-11 22:47:30,536 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:48:30] 2025-10-11 22:47:30,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,542 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:48:30] 2025-10-11 22:47:30,542 | INFO     | job 6837631287 has completed (purged errors)
[2025-10-12 00:48:30] 2025-10-11 22:47:30,542 | INFO     | overall cleanup function is called
[2025-10-12 00:48:30] 2025-10-11 22:47:31,548 | INFO     | --- collectZombieJob: --- 10, [214441]
[2025-10-12 00:48:30] 2025-10-11 22:47:31,548 | INFO     | zombie collector waiting for pid 214441
[2025-10-12 00:48:30] 2025-10-11 22:47:31,548 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:48:30] 2025-10-11 22:47:31,548 | INFO     | collected zombie processes
[2025-10-12 00:48:30] 2025-10-11 22:47:31,548 | INFO     | will attempt to kill all subprocesses of pid=214441
[2025-10-12 00:48:30] 2025-10-11 22:47:31,625 | INFO     | process IDs to be killed: [214441] (in reverse order)
[2025-10-12 00:48:30] 2025-10-11 22:47:31,643 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:48:30] 2025-10-11 22:47:31,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:48:30] 2025-10-11 22:47:31,645 | INFO     | did not find any defunct processes belonging to 214441
[2025-10-12 00:48:30] 2025-10-11 22:47:31,646 | INFO     | did not find any defunct processes belonging to 214441
[2025-10-12 00:48:30] 2025-10-11 22:47:31,646 | INFO     | ready for new job
[2025-10-12 00:48:30] 2025-10-11 22:47:31,646 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:48:30] 2025-10-11 22:47:31,646 | INFO     | ***************************************
[2025-10-12 00:48:30] 2025-10-11 22:47:31,646 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:48:30] 2025-10-11 22:47:31,646 | INFO     | ***************************************
[2025-10-12 00:48:30] 2025-10-11 22:47:31,646 | INFO     | 
[2025-10-12 00:48:30] 2025-10-11 22:47:31,647 | INFO     | architecture information:
[2025-10-12 00:48:30] 2025-10-11 22:47:31,647 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:48:30] 2025-10-11 22:47:31,651 | INFO     | cat /etc/os-release:
[2025-10-12 00:48:30] NAME="CentOS Linux"
[2025-10-12 00:48:30] VERSION="7 (Core)"
[2025-10-12 00:48:30] ID="centos"
[2025-10-12 00:48:30] ID_LIKE="rhel fedora"
[2025-10-12 00:48:30] VERSION_ID="7"
[2025-10-12 00:48:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:48:30] ANSI_COLOR="0;31"
[2025-10-12 00:48:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:48:30] HOME_URL="https://www.centos.org/"
[2025-10-12 00:48:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:48:30] 
[2025-10-12 00:48:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:48:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:48:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:48:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:48:30] 
[2025-10-12 00:48:30] 2025-10-11 22:47:31,651 | INFO     | ***************************************
[2025-10-12 00:48:30] 2025-10-11 22:47:32,153 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-12 00:48:30] 2025-10-11 22:47:32,161 | INFO     | sufficient remaining disk space (17149460480 B)
[2025-10-12 00:48:30] 2025-10-11 22:47:32,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:48:30] 2025-10-11 22:47:32,161 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:48:30] 2025-10-11 22:47:32,161 | INFO     | update_server=False
[2025-10-12 00:48:30] 2025-10-11 22:47:32,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:48:30] 2025-10-11 22:47:32,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:48:30] 2025-10-11 22:47:32,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:48:30] 2025-10-11 22:47:32,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:48:30] 2025-10-11 22:47:32,162 | INFO     | aborting loop
[2025-10-12 00:48:30] 2025-10-11 22:47:32,538 | INFO     | all payload control threads have been joined
[2025-10-12 00:48:30] 2025-10-11 22:47:32,658 | INFO     | all data control threads have been joined
[2025-10-12 00:48:30] 2025-10-11 22:47:33,166 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:33,167 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:33,167 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:33,168 | INFO     | all job control threads have been joined
[2025-10-12 00:48:30] 2025-10-11 22:47:33,334 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:33,543 | INFO     | [payload] control thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:33,663 | INFO     | [data] control thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:33,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:48:30] 2025-10-11 22:47:33,749 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:33,870 | INFO     | [job] validate thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:33,963 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:34,167 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:34,174 | INFO     | [job] control thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:34,210 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:34,248 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:34,299 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:37,733 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:47:42,655 | INFO     | job.realtimelogging is not enabled
[2025-10-12 00:48:30] 2025-10-11 22:47:43,660 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:48:30] 2025-10-11 22:48:02,138 | INFO     | PID=186956 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 00:48:30] 2025-10-11 22:48:02,138 | INFO     | .. there are 3 such processes running
[2025-10-12 00:48:30] 2025-10-11 22:48:02,138 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:48:30] 2025-10-11 22:48:02,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:48:30] 2025-10-11 22:48:02,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:48:30] 2025-10-11 22:48:23,555 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:48:30] 2025-10-11 22:48:25,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732147308352)>', '<ExcThread(monitor, started 139731752953600)>']
[2025-10-12 00:48:30] 2025-10-11 22:48:26,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:48:30] 2025-10-11 22:48:26,255 | INFO     | [monitor] control thread has ended
[2025-10-12 00:48:30] 2025-10-11 22:48:30,596 | INFO     | all workflow threads have been joined
[2025-10-12 00:48:30] 2025-10-11 22:48:30,596 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:48:30] 2025-10-11 22:48:30,596 | INFO     | traces error code: 0
[2025-10-12 00:48:30] 2025-10-11 22:48:30,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:48:30] 2025-10-11 22:48:30,652 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:48:30] 2025-10-11 22:48:30,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:48:30] 2025-10-11 22:48:30,655 [wrapper] pilotpid: 186956
[2025-10-12 00:48:30] 2025-10-11 22:48:30,657 [wrapper] Pilot exit status: 0
[2025-10-12 00:48:30] 2025-10-11 22:48:30,662 [wrapper] pandaids: 6837631287
[2025-10-12 00:48:30] 2025-10-11 22:48:30,675 [wrapper] cleanup supervisor_pilot  345034 186957
[2025-10-12 00:48:30] 2025-10-11 22:48:30,676 [wrapper] Test setup, not cleaning
[2025-10-12 00:48:30] 2025-10-11 22:48:30,677 [wrapper] apfmon messages muted
[2025-10-12 00:48:30] 2025-10-11 22:48:30,678 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:48:30] 2025-10-11 22:48:30,679 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:48:30]  *** Error codes and diagnostics ***
[2025-10-12 00:48:30]     "exeErrorCode": 0,
[2025-10-12 00:48:30]     "exeErrorDiag": "",
[2025-10-12 00:48:30]     "pilotErrorCode": 0,
[2025-10-12 00:48:30]     "pilotErrorDiag": "",
[2025-10-12 00:48:30]  *** Listing of results directory ***
[2025-10-12 00:48:30] total 406627
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc    557409 Oct 10 16:05 pilot3.tar.gz
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc      5112 Oct 10 16:10 queuedata.json
[2025-10-12 00:48:30] -rwx------ 1 boinc boinc     36292 Oct 10 16:10 runpilot2-wrapper.sh
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc       100 Oct 11 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:48:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 23:38 run_atlas
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc       105 Oct 11 23:38 job.xml
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc      6795 Oct 11 23:38 init_data.xml
[2025-10-12 00:48:30] -rw-r--r-- 2 boinc boinc 221124280 Oct 11 23:38 EVNT.46676267._001613.pool.root.1
[2025-10-12 00:48:30] -rw-r--r-- 2 boinc boinc     15120 Oct 11 23:38 start_atlas.sh
[2025-10-12 00:48:30] drwxrwx--x 2 boinc boinc         5 Oct 11 23:38 shared
[2025-10-12 00:48:30] -rw-r--r-- 2 boinc boinc    569681 Oct 11 23:38 input.tar.gz
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc         0 Oct 11 23:38 boinc_lockfile
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc      2550 Oct 11 23:38 pandaJob.out
[2025-10-12 00:48:30] -rw------- 1 boinc boinc    975528 Oct 11 23:38 agis_schedconf.cvmfs.json
[2025-10-12 00:48:30] -rw------- 1 boinc boinc   1560580 Oct 11 23:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:48:30] drwx------ 5 boinc boinc        22 Oct 11 23:38 pilot3
[2025-10-12 00:48:30] -rw------- 1 boinc boinc 193332374 Oct 12 00:47 HITS.46676269._039765.pool.root.1
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc       529 Oct 12 00:47 boinc_task_state.xml
[2025-10-12 00:48:30] -rw------- 1 boinc boinc      1035 Oct 12 00:47 memory_monitor_summary.json
[2025-10-12 00:48:30] -rw------- 1 boinc boinc    299005 Oct 12 00:47 log.46676269._039765.job.log.tgz.1
[2025-10-12 00:48:30] -rw------- 1 boinc boinc      7765 Oct 12 00:47 heartbeat.json
[2025-10-12 00:48:30] -rw------- 1 boinc boinc        95 Oct 12 00:48 pilot_heartbeat.json
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc        27 Oct 12 00:48 wrapper_checkpoint.txt
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc      8192 Oct 12 00:48 boinc_mmap_file
[2025-10-12 00:48:30] -rw------- 1 boinc boinc      4901 Oct 12 00:48 pilotlog.txt
[2025-10-12 00:48:30] -rw------- 1 boinc boinc    631223 Oct 12 00:48 log.46676269._039765.job.log.1
[2025-10-12 00:48:30] -rw------- 1 boinc boinc       657 Oct 12 00:48 Y0bMDmF0SR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxXdNDmccTSWo.diag
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc      8802 Oct 12 00:48 runtime_log.err
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc       620 Oct 12 00:48 runtime_log
[2025-10-12 00:48:30] -rw------- 1 boinc boinc    952320 Oct 12 00:48 result.tar.gz
[2025-10-12 00:48:30] -rw------- 1 boinc boinc       357 Oct 12 00:48 output.list
[2025-10-12 00:48:30] -rw-r--r-- 1 boinc boinc     21367 Oct 12 00:48 stderr.txt
[2025-10-12 00:48:30] HITS file was successfully produced:
[2025-10-12 00:48:30] -rw------- 1 boinc boinc 193332374 Oct 12 00:47 shared/HITS.pool.root.1
[2025-10-12 00:48:30]  *** Contents of shared directory: ***
[2025-10-12 00:48:30] total 405569
[2025-10-12 00:48:30] -rw-r--r-- 2 boinc boinc 221124280 Oct 11 23:38 ATLAS.root_0
[2025-10-12 00:48:30] -rw-r--r-- 2 boinc boinc     15120 Oct 11 23:38 start_atlas.sh
[2025-10-12 00:48:30] -rw-r--r-- 2 boinc boinc    569681 Oct 11 23:38 input.tar.gz
[2025-10-12 00:48:30] -rw------- 1 boinc boinc 193332374 Oct 12 00:47 HITS.pool.root.1
[2025-10-12 00:48:30] -rw------- 1 boinc boinc    952320 Oct 12 00:48 result.tar.gz
00:48:32 (177889): run_atlas exited; CPU time 23431.298170
00:48:32 (177889): called boinc_finish(0)

</stderr_txt>
]]>

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