Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:43:45 (3872811): wrapper (7.7.26015): starting
21:43:45 (3872811): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 21:43:45] Arguments: --nthreads 12
[2025-10-10 21:43:45] Threads: 12
[2025-10-10 21:43:45] Checking for CVMFS
[2025-10-10 21:43:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 21:43:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 21:43:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 21:43:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 21:43:46] 2.13.2.0 135553 2109 115568 151567 0 370 28393635 32503809 7919 16776704 0 35830398 99.974 2495741 52137 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 21:43:46] CVMFS is ok
[2025-10-10 21:43:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 21:43:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 21:43:46] Further information can be found at the LHC@home message board.
[2025-10-10 21:43:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 21:43:46] Checking for apptainer binary...
[2025-10-10 21:43:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 21:43:46] Running /usr/bin/apptainer --version
[2025-10-10 21:43:46] apptainer version 1.4.3-1.el9
[2025-10-10 21:43:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 21:43:46] c8-7-2.aglt2.org
[2025-10-10 21:43:46] apptainer works
[2025-10-10 21:43:46] Set ATHENA_PROC_NUMBER=12
[2025-10-10 21:43:46] Set ATHENA_CORE_NUMBER=12
[2025-10-10 21:43:46] Starting ATLAS job with PandaID=6837401363
[2025-10-10 21:43:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 22:14:03]  *** The last 200 lines of the pilot log: ***
[2025-10-10 22:14:03]  status_code=0
[2025-10-10 22:14:03]  storage_token=
[2025-10-10 22:14:03]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6837401363/log.46676269._032316.job.log.tgz.1
[2025-10-10 22:14:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/23/log.46676269._032316.job.log.tgz.1
[2025-10-10 22:14:03]  workdir=None
[2025-10-10 22:14:03] ]
[2025-10-10 22:14:03] 2025-10-11 02:13:09,589 | INFO     | transferring file log.46676269._032316.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6837401363/log.46676269._032316.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 22:14:03] 2025-10-11 02:13:09,589 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6837401363/log.46676269._032316.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._032316.job
[2025-10-10 22:14:03] 2025-10-11 02:13:09,609 | INFO     | adding to output.list: log.46676269._032316.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/23/log.46676269._032316.job.log.tg
[2025-10-10 22:14:03] 2025-10-11 02:13:09,609 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 22:14:03] 2025-10-11 02:13:09,609 | INFO     | summary of transferred files:
[2025-10-10 22:14:03] 2025-10-11 02:13:09,609 | INFO     |  -- lfn=log.46676269._032316.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 22:14:03] 2025-10-11 02:13:09,609 | INFO     | stage-out finished correctly
[2025-10-10 22:14:03] 2025-10-11 02:13:09,662 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 22:14:03] 2025-10-11 02:13:10,860 | INFO     | time since job start (1755s) is within the limit (172800.0s)
[2025-10-10 22:14:03] 2025-10-11 02:13:11,311 | WARNING  | process 3883370 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 22:14:03] 2025-10-11 02:13:11,311 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6837401363/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 22:14:03] 2025-10-11 02:13:11,716 | INFO     | number of running child processes to parent process 3883370: 1
[2025-10-10 22:14:03] 2025-10-11 02:13:11,716 | INFO     | maximum number of monitored processes: 6
[2025-10-10 22:14:03] 2025-10-11 02:13:11,963 | INFO     | job 6837401363 has state=finished
[2025-10-10 22:14:03] 2025-10-11 02:13:11,963 | INFO     | preparing for final server update for job 6837401363 in state='finished'
[2025-10-10 22:14:03] 2025-10-11 02:13:11,963 | INFO     | this job has now completed (state=finished)
[2025-10-10 22:14:03] 2025-10-11 02:13:11,964 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 22:14:03] 2025-10-11 02:13:11,964 | INFO     | log transfer has been attempted: DONE
[2025-10-10 22:14:03] 2025-10-11 02:13:11,964 | INFO     | job 6837401363 has finished - writing final server update
[2025-10-10 22:14:03] 2025-10-11 02:13:11,964 | INFO     | total number of processed events: 400 (read)
[2025-10-10 22:14:03] 2025-10-11 02:13:11,965 | INFO     | executing command: lscpu
[2025-10-10 22:14:03] 2025-10-11 02:13:12,030 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 22:14:03] 2025-10-11 02:13:12,864 | INFO     | time since job start (1757s) is within the limit (172800.0s)
[2025-10-10 22:14:03] 2025-10-11 02:13:14,219 | INFO     | monitor loop #132: job 0:6837401363 is in state 'finished'
[2025-10-10 22:14:03] 2025-10-11 02:13:14,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 22:14:03] 2025-10-11 02:13:14,870 | INFO     | time since job start (1759s) is within the limit (172800.0s)
[2025-10-10 22:14:03] 2025-10-11 02:13:15,563 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 22:14:03] 2025-10-11 02:13:15,581 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3619.6773749999966
[2025-10-10 22:14:03] 2025-10-11 02:13:15,607 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6837401363/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 22:14:03] 2025-10-11 02:13:15,607 | INFO     | extracted standard info from prmon json
[2025-10-10 22:14:03] 2025-10-11 02:13:15,607 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 22:14:03] 2025-10-11 02:13:15,607 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 22:14:03] 2025-10-11 02:13:15,608 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 22:14:03] 2025-10-11 02:13:15,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 22:14:03] 2025-10-11 02:13:15,609 | INFO     | fitting pss+swap vs Time
[2025-10-10 22:14:03] 2025-10-11 02:13:15,609 | INFO     | sum of square deviations: 3294945.5
[2025-10-10 22:14:03] 2025-10-11 02:13:15,609 | INFO     | sum of deviations: -20219639.5
[2025-10-10 22:14:03] 2025-10-11 02:13:15,609 | INFO     | mean x: 1760148004.5
[2025-10-10 22:14:03] 2025-10-11 02:13:15,609 | INFO     | mean y: 2398501.227272727
[2025-10-10 22:14:03] 2025-10-11 02:13:15,609 | INFO     | -- intersect: 10803657009.94445
[2025-10-10 22:14:03] 2025-10-11 02:13:15,609 | INFO     | intersect: 10803657009.94445
[2025-10-10 22:14:03] 2025-10-11 02:13:15,609 | INFO     | chi2: 0.0028705805571055247
[2025-10-10 22:14:03] 2025-10-11 02:13:15,609 | INFO     | -- intersect: 10803657009.94445
[2025-10-10 22:14:03] 2025-10-11 02:13:15,609 | INFO     | current memory leak: -6.14 B/s (using 22 data points, chi2=0.00)
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | could have reported an average CPU frequency of 3625 MHz (4 samples)
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | ..............................
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | . Timing measurements:
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | . get job = 0 s
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | . initial setup = 2 s
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | . payload setup = 4 s
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | . stage-in = 0 s
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | . payload execution = 1730 s
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | . stage-out = 0 s
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | . log creation = 0 s
[2025-10-10 22:14:03] 2025-10-11 02:13:15,610 | INFO     | ..............................
[2025-10-10 22:14:03] 2025-10-11 02:13:15,668 | INFO     | 
[2025-10-10 22:14:03] 2025-10-11 02:13:15,668 | INFO     | job summary report
[2025-10-10 22:14:03] 2025-10-11 02:13:15,668 | INFO     | --------------------------------------------------
[2025-10-10 22:14:03] 2025-10-11 02:13:15,668 | INFO     | PanDA job id: 6837401363
[2025-10-10 22:14:03] 2025-10-11 02:13:15,668 | INFO     | task id: 46676269
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | errors: (none)
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | pilot state: finished 
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | transexitcode: 0
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | exeerrorcode: 0
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | exeerrordiag: 
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | exitcode: 0
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | exitmsg: OK
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | cpuconsumptiontime: 17750 s
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | nevents: 400
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | neventsw: 0
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | pid: 3883370
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | pgrp: 3883370
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | corecount: 12
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | event service: False
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | sizes: {0: 2348631, 1: 2348886, 4: 2349148, 11: 2349176, 1739: 2374072, 1740: 2383254, 1746: 2383392}
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | --------------------------------------------------
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | 
[2025-10-10 22:14:03] 2025-10-11 02:13:15,669 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-10 22:14:03] 2025-10-11 02:13:15,686 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | job 6837401363 has completed (purged errors)
[2025-10-10 22:14:03] 2025-10-11 02:13:15,687 | INFO     | overall cleanup function is called
[2025-10-10 22:14:03] 2025-10-11 02:13:16,372 | INFO     | PID=3876888 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-10 22:14:03] 2025-10-11 02:13:16,372 | INFO     | .. there are 11 such processes running
[2025-10-10 22:14:03] 2025-10-11 02:13:16,696 | INFO     | --- collectZombieJob: --- 10, [3883370]
[2025-10-10 22:14:03] 2025-10-11 02:13:16,696 | INFO     | zombie collector waiting for pid 3883370
[2025-10-10 22:14:03] 2025-10-11 02:13:16,696 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 22:14:03] 2025-10-11 02:13:16,696 | INFO     | collected zombie processes
[2025-10-10 22:14:03] 2025-10-11 02:13:16,696 | INFO     | will attempt to kill all subprocesses of pid=3883370
[2025-10-10 22:14:03] 2025-10-11 02:13:17,075 | INFO     | process IDs to be killed: [3883370] (in reverse order)
[2025-10-10 22:14:03] 2025-10-11 02:13:17,217 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 22:14:03] 2025-10-11 02:13:17,217 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 22:14:03] 2025-10-11 02:13:17,237 | INFO     | did not find any defunct processes belonging to 3883370
[2025-10-10 22:14:03] 2025-10-11 02:13:17,252 | INFO     | did not find any defunct processes belonging to 3883370
[2025-10-10 22:14:03] 2025-10-11 02:13:17,253 | INFO     | ready for new job
[2025-10-10 22:14:03] 2025-10-11 02:13:17,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 22:14:03] 2025-10-11 02:13:17,254 | INFO     | ***************************************
[2025-10-10 22:14:03] 2025-10-11 02:13:17,254 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 22:14:03] 2025-10-11 02:13:17,254 | INFO     | ***************************************
[2025-10-10 22:14:03] 2025-10-11 02:13:17,254 | INFO     | 
[2025-10-10 22:14:03] 2025-10-11 02:13:17,272 | INFO     | architecture information:
[2025-10-10 22:14:03] 2025-10-11 02:13:17,272 | INFO     | executing command: cat /etc/os-release
[2025-10-10 22:14:03] 2025-10-11 02:13:17,286 | INFO     | cat /etc/os-release:
[2025-10-10 22:14:03] NAME="CentOS Linux"
[2025-10-10 22:14:03] VERSION="7 (Core)"
[2025-10-10 22:14:03] ID="centos"
[2025-10-10 22:14:03] ID_LIKE="rhel fedora"
[2025-10-10 22:14:03] VERSION_ID="7"
[2025-10-10 22:14:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 22:14:03] ANSI_COLOR="0;31"
[2025-10-10 22:14:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 22:14:03] HOME_URL="https://www.centos.org/"
[2025-10-10 22:14:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 22:14:03] 
[2025-10-10 22:14:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 22:14:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 22:14:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 22:14:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 22:14:03] 
[2025-10-10 22:14:03] 2025-10-11 02:13:17,286 | INFO     | ***************************************
[2025-10-10 22:14:03] 2025-10-11 02:13:17,789 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-10 22:14:03] 2025-10-11 02:13:17,804 | INFO     | sufficient remaining disk space (90632617984 B)
[2025-10-10 22:14:03] 2025-10-11 02:13:17,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 22:14:03] 2025-10-11 02:13:17,804 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 22:14:03] 2025-10-11 02:13:17,804 | INFO     | update_server=False
[2025-10-10 22:14:03] 2025-10-11 02:13:17,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 22:14:03] 2025-10-11 02:13:17,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 22:14:03] 2025-10-11 02:13:17,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 22:14:03] 2025-10-11 02:13:17,805 | INFO     | aborting loop
[2025-10-10 22:14:03] 2025-10-11 02:13:18,085 | INFO     | all payload control threads have been joined
[2025-10-10 22:14:03] 2025-10-11 02:13:18,088 | INFO     | all job control threads have been joined
[2025-10-10 22:14:03] 2025-10-11 02:13:18,651 | INFO     | all data control threads have been joined
[2025-10-10 22:14:03] 2025-10-11 02:13:18,809 | INFO     | [job] retrieve thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:18,810 | INFO     | [job] job monitor thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:18,985 | INFO     | [job] validate thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:19,091 | INFO     | [payload] control thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:19,094 | INFO     | [job] control thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:19,112 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:19,163 | INFO     | [payload] failed_post thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:19,195 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:19,657 | INFO     | [data] control thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:19,711 | INFO     | [payload] validate_post thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:19,810 | INFO     | [data] copytool_out thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:19,845 | INFO     | [data] copytool_in thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:20,115 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:20,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 22:14:03] 2025-10-11 02:13:20,677 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 22:14:03] 2025-10-11 02:13:21,682 | INFO     | [job] queue monitor thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:24,229 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:28,821 | INFO     | job.realtimelogging is not enabled
[2025-10-10 22:14:03] 2025-10-11 02:13:29,824 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 22:14:03] 2025-10-11 02:13:48,965 | INFO     | PID=3876888 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 22:14:03] 2025-10-11 02:13:48,966 | INFO     | .. there are 11 such processes running
[2025-10-10 22:14:03] 2025-10-11 02:13:48,966 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 22:14:03] 2025-10-11 02:13:48,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 22:14:03] 2025-10-11 02:13:48,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 22:14:03] 2025-10-11 02:13:52,351 [wrapper] supervise_pilot (15 min periods counter: 3)
[2025-10-10 22:14:03] 2025-10-11 02:13:57,567 | INFO     | [monitor] cgroup control has ended
[2025-10-10 22:14:03] 2025-10-11 02:13:58,262 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140553759967040)>', '<ExcThread(monitor, started 140552997693184)>']
[2025-10-10 22:14:03] 2025-10-11 02:13:59,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 22:14:03] 2025-10-11 02:13:59,017 | INFO     | [monitor] control thread has ended
[2025-10-10 22:14:03] 2025-10-11 02:14:03,288 | INFO     | all workflow threads have been joined
[2025-10-10 22:14:03] 2025-10-11 02:14:03,288 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 22:14:03] 2025-10-11 02:14:03,288 | INFO     | traces error code: 0
[2025-10-10 22:14:03] 2025-10-11 02:14:03,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 22:14:03] 2025-10-11 02:14:03,397 [wrapper] ==== pilot stdout END ====
[2025-10-10 22:14:03] 2025-10-11 02:14:03,399 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 22:14:03] 2025-10-11 02:14:03,401 [wrapper] pilotpid: 3876888
[2025-10-10 22:14:03] 2025-10-11 02:14:03,403 [wrapper] Pilot exit status: 0
[2025-10-10 22:14:03] 2025-10-11 02:14:03,411 [wrapper] pandaids: 6837401363
[2025-10-10 22:14:03] 2025-10-11 02:14:03,514 [wrapper] cleanup supervisor_pilot 4068363 3876889
[2025-10-10 22:14:03] 2025-10-11 02:14:03,516 [wrapper] Test setup, not cleaning
[2025-10-10 22:14:03] 2025-10-11 02:14:03,518 [wrapper] apfmon messages muted
[2025-10-10 22:14:03] 2025-10-11 02:14:03,519 [wrapper] ==== wrapper stdout END ====
[2025-10-10 22:14:03] 2025-10-11 02:14:03,521 [wrapper] ==== wrapper stderr END ====
[2025-10-10 22:14:03]  *** Error codes and diagnostics ***
[2025-10-10 22:14:03]     "exeErrorCode": 0,
[2025-10-10 22:14:03]     "exeErrorDiag": "",
[2025-10-10 22:14:03]     "pilotErrorCode": 0,
[2025-10-10 22:14:03]     "pilotErrorDiag": "",
[2025-10-10 22:14:03]  *** Listing of results directory ***
[2025-10-10 22:14:03] total 408648
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 00:08 pilot3.tar.gz
[2025-10-10 22:14:03] -rwx------. 1 boincer umatlas     36292 Oct 10 00:13 runpilot2-wrapper.sh
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 00:14 queuedata.json
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas       100 Oct 10 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 22:14:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 21:43 run_atlas
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas       105 Oct 10 21:43 job.xml
[2025-10-10 22:14:03] -rw-r--r--. 2 boincer umatlas 224224757 Oct 10 21:43 EVNT.46676267._001316.pool.root.1
[2025-10-10 22:14:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 21:43 start_atlas.sh
[2025-10-10 22:14:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 21:43 shared
[2025-10-10 22:14:03] -rw-r--r--. 2 boincer umatlas    569682 Oct 10 21:43 input.tar.gz
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas         0 Oct 10 21:43 boinc_lockfile
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas      2551 Oct 10 21:43 pandaJob.out
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas    975517 Oct 10 21:43 agis_schedconf.cvmfs.json
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas   1560580 Oct 10 21:43 agis_ddmendpoints.agis.ALL.json
[2025-10-10 22:14:03] drwx------. 5 boincer umatlas      4096 Oct 10 21:43 pilot3
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas 189012947 Oct 10 22:12 HITS.46676269._032316.pool.root.1
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas       529 Oct 10 22:12 boinc_task_state.xml
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas      7161 Oct 10 22:12 init_data.xml
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas      1031 Oct 10 22:13 memory_monitor_summary.json
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas    360170 Oct 10 22:13 log.46676269._032316.job.log.tgz.1
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas      7775 Oct 10 22:13 heartbeat.json
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas        95 Oct 10 22:13 pilot_heartbeat.json
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas        27 Oct 10 22:14 wrapper_checkpoint.txt
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 22:14 boinc_mmap_file
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas      4896 Oct 10 22:14 pilotlog.txt
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas    294953 Oct 10 22:14 log.46676269._032316.job.log.1
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas       357 Oct 10 22:14 output.list
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas       620 Oct 10 22:14 runtime_log
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas    675840 Oct 10 22:14 result.tar.gz
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas      8695 Oct 10 22:14 runtime_log.err
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas       648 Oct 10 22:14 GfpNDm2gJR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaLPMDmbc7q3m.diag
[2025-10-10 22:14:03] -rw-r--r--. 1 boincer umatlas     22131 Oct 10 22:14 stderr.txt
[2025-10-10 22:14:03] HITS file was successfully produced:
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas 189012947 Oct 10 22:12 shared/HITS.pool.root.1
[2025-10-10 22:14:03]  *** Contents of shared directory: ***
[2025-10-10 22:14:03] total 404800
[2025-10-10 22:14:03] -rw-r--r--. 2 boincer umatlas 224224757 Oct 10 21:43 ATLAS.root_0
[2025-10-10 22:14:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 21:43 start_atlas.sh
[2025-10-10 22:14:03] -rw-r--r--. 2 boincer umatlas    569682 Oct 10 21:43 input.tar.gz
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas 189012947 Oct 10 22:12 HITS.pool.root.1
[2025-10-10 22:14:03] -rw-------. 1 boincer umatlas    675840 Oct 10 22:14 result.tar.gz
22:14:05 (3872811): run_atlas exited; CPU time 17786.338968
22:14:05 (3872811): called boinc_finish(0)

</stderr_txt>
]]>

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