Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:21 (99085): wrapper (7.7.26015): starting
00:02:21 (99085): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:02:21] Arguments: --nthreads 9
[2025-10-11 00:02:21] Threads: 9
[2025-10-11 00:02:21] Checking for CVMFS
[2025-10-11 00:02:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:02:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:02:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:02:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:02:25] 2.13.2.0 123651 107204 315860 151571 0 26 26499718 39288832 9772 16776704 0 49399741 99.738 39794536 35526 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:02:25] CVMFS is ok
[2025-10-11 00:02:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:02:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:02:25] Further information can be found at the LHC@home message board.
[2025-10-11 00:02:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:02:25] Checking for apptainer binary...
[2025-10-11 00:02:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:02:25] Running /usr/bin/apptainer --version
[2025-10-11 00:02:26] apptainer version 1.4.3-1.el9
[2025-10-11 00:02:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:02:27] c-211-19.aglt2.org
[2025-10-11 00:02:27] apptainer works
[2025-10-11 00:02:28] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:02:28] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:02:28] Starting ATLAS job with PandaID=6837669137
[2025-10-11 00:02:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:10:47]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:10:47] 2025-10-12 06:00:44,583 | INFO     | intersect: -4219397596.5232067
[2025-10-12 02:10:47] 2025-10-12 06:00:44,590 | INFO     | chi2: 10.566519681885818
[2025-10-12 02:10:47] 2025-10-12 06:00:44,592 | INFO     | sum of square deviations: 1086764672603.9789
[2025-10-12 02:10:47] 2025-10-12 06:00:44,807 | INFO     | monitor loop #4751: job 0:6837669137 is in state 'finished'
[2025-10-12 02:10:47] 2025-10-12 06:00:44,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:10:47] 2025-10-12 06:00:44,953 | INFO     | sum of deviations: 2925690016379.29
[2025-10-12 02:10:47] 2025-10-12 06:00:44,953 | INFO     | mean x: 1760202083.1231072
[2025-10-12 02:10:47] 2025-10-12 06:00:44,954 | INFO     | mean y: 2537604.100065833
[2025-10-12 02:10:47] 2025-10-12 06:00:44,954 | INFO     | -- intersect: -4736119983.162078
[2025-10-12 02:10:47] 2025-10-12 06:00:44,954 | INFO     | intersect: -4736119983.162078
[2025-10-12 02:10:47] 2025-10-12 06:00:44,968 | INFO     | chi2: 8.40749538463226
[2025-10-12 02:10:47] 2025-10-12 06:00:44,969 | INFO     | current chi2=8.40749538463226 (change=20.432690822076204 %)
[2025-10-12 02:10:47] 2025-10-12 06:00:44,969 | INFO     | right removable region: 1518
[2025-10-12 02:10:47] 2025-10-12 06:00:44,976 | INFO     | sum of square deviations: 1086763908884.7322
[2025-10-12 02:10:47] 2025-10-12 06:00:45,591 | INFO     | sum of deviations: 2093301797497.7903
[2025-10-12 02:10:47] 2025-10-12 06:00:45,591 | INFO     | mean x: 1760202388.1237657
[2025-10-12 02:10:47] 2025-10-12 06:00:45,591 | INFO     | mean y: 2541092.2883475972
[2025-10-12 02:10:47] 2025-10-12 06:00:45,591 | INFO     | -- intersect: -3387923748.2312994
[2025-10-12 02:10:47] 2025-10-12 06:00:45,592 | INFO     | intersect: -3387923748.2312994
[2025-10-12 02:10:47] 2025-10-12 06:00:45,594 | INFO     | chi2: 6.273240642695744
[2025-10-12 02:10:47] 2025-10-12 06:00:45,594 | INFO     | current chi2=6.273240642695744 (change=40.630966187949674 %)
[2025-10-12 02:10:47] 2025-10-12 06:00:45,636 | INFO     | sum of square deviations: 1076066935430.9062
[2025-10-12 02:10:47] 2025-10-12 06:00:46,078 | INFO     | sum of deviations: 1701722163430.226
[2025-10-12 02:10:47] 2025-10-12 06:00:46,078 | INFO     | mean x: 1760202540.6248348
[2025-10-12 02:10:47] 2025-10-12 06:00:46,079 | INFO     | mean y: 2546673.9088507267
[2025-10-12 02:10:47] 2025-10-12 06:00:46,079 | INFO     | -- intersect: -2781086552.6877728
[2025-10-12 02:10:47] 2025-10-12 06:00:46,079 | INFO     | intersect: -2781086552.6877728
[2025-10-12 02:10:47] 2025-10-12 06:00:46,103 | INFO     | chi2: 4.084282970330287
[2025-10-12 02:10:47] 2025-10-12 06:00:46,104 | INFO     | current chi2=4.084282970330287 (change=34.89357091560281 %)
[2025-10-12 02:10:47] 2025-10-12 06:00:46,106 | INFO     | sum of square deviations: 1065440566002.5779
[2025-10-12 02:10:47] 2025-10-12 06:00:47,061 | INFO     | sum of deviations: 1463451231701.3008
[2025-10-12 02:10:47] 2025-10-12 06:00:47,062 | INFO     | mean x: 1760202693.1245859
[2025-10-12 02:10:47] 2025-10-12 06:00:47,062 | INFO     | mean y: 2550091.8813783964
[2025-10-12 02:10:47] 2025-10-12 06:00:47,062 | INFO     | -- intersect: -2415201664.0536304
[2025-10-12 02:10:47] 2025-10-12 06:00:47,153 | INFO     | intersect: -2415201664.0536304
[2025-10-12 02:10:47] 2025-10-12 06:00:47,156 | INFO     | chi2: 3.2755884277079437
[2025-10-12 02:10:47] 2025-10-12 06:00:47,157 | INFO     | current chi2=3.2755884277079437 (change=19.800159501606377 %)
[2025-10-12 02:10:47] 2025-10-12 06:00:47,157 | INFO     | left removable region: 30
[2025-10-12 02:10:47] 2025-10-12 06:00:47,171 | INFO     | sum of square deviations: 1021573579809.9933
[2025-10-12 02:10:47] 2025-10-12 06:00:47,439 | INFO     | monitor loop #4752: job 0:6837669137 is in state 'finished'
[2025-10-12 02:10:47] 2025-10-12 06:00:47,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:10:47] 2025-10-12 06:00:47,726 | INFO     | PID=110493 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 02:10:47] 2025-10-12 06:00:47,726 | INFO     | .. there are 9 such processes running
[2025-10-12 02:10:47] 2025-10-12 06:00:48,065 | INFO     | sum of deviations: 1317571165213.166
[2025-10-12 02:10:47] 2025-10-12 06:00:48,066 | INFO     | mean x: 1760202967.627016
[2025-10-12 02:10:47] 2025-10-12 06:00:48,066 | INFO     | mean y: 2560731.194892473
[2025-10-12 02:10:47] 2025-10-12 06:00:48,066 | INFO     | -- intersect: -2267655258.043354
[2025-10-12 02:10:47] 2025-10-12 06:00:48,066 | INFO     | intersect: -2267655258.043354
[2025-10-12 02:10:47] 2025-10-12 06:00:48,114 | INFO     | chi2: 0.2511585699832289
[2025-10-12 02:10:47] 2025-10-12 06:00:48,114 | INFO     | -- intersect: -2267655258.043354
[2025-10-12 02:10:47] 2025-10-12 06:00:48,115 | INFO     | current memory leak: 1.29 B/s (using 1488 data points, chi2=0.25)
[2025-10-12 02:10:47] 2025-10-12 06:00:48,143 | INFO     | could have reported an average CPU frequency of 2900 MHz (54 samples)
[2025-10-12 02:10:47] 2025-10-12 06:00:48,144 | INFO     | ..............................
[2025-10-12 02:10:47] 2025-10-12 06:00:48,144 | INFO     | . Timing measurements:
[2025-10-12 02:10:47] 2025-10-12 06:00:48,144 | INFO     | . get job = 0 s
[2025-10-12 02:10:47] 2025-10-12 06:00:48,144 | INFO     | . initial setup = 13 s
[2025-10-12 02:10:47] 2025-10-12 06:00:48,144 | INFO     | . payload setup = 80 s
[2025-10-12 02:10:47] 2025-10-12 06:00:48,145 | INFO     | . stage-in = 1 s
[2025-10-12 02:10:47] 2025-10-12 06:00:48,145 | INFO     | . payload execution = 92974 s
[2025-10-12 02:10:47] 2025-10-12 06:00:48,145 | INFO     | . stage-out = 74 s
[2025-10-12 02:10:47] 2025-10-12 06:00:48,145 | INFO     | . log creation = 3 s
[2025-10-12 02:10:47] 2025-10-12 06:00:48,145 | INFO     | ..............................
[2025-10-12 02:10:47] 2025-10-12 06:00:48,773 | INFO     | time since job start (93347s) is within the limit (172800.0s)
[2025-10-12 02:10:47] 2025-10-12 06:00:48,868 | INFO     | 
[2025-10-12 02:10:47] 2025-10-12 06:00:48,869 | INFO     | job summary report
[2025-10-12 02:10:47] 2025-10-12 06:00:48,869 | INFO     | --------------------------------------------------
[2025-10-12 02:10:47] 2025-10-12 06:00:48,869 | INFO     | PanDA job id: 6837669137
[2025-10-12 02:10:47] 2025-10-12 06:00:48,869 | INFO     | task id: 46676269
[2025-10-12 02:10:47] 2025-10-12 06:00:48,869 | INFO     | errors: (none)
[2025-10-12 02:10:47] 2025-10-12 06:00:48,870 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:10:47] 2025-10-12 06:00:48,870 | INFO     | pilot state: finished 
[2025-10-12 02:10:47] 2025-10-12 06:00:48,870 | INFO     | transexitcode: 0
[2025-10-12 02:10:47] 2025-10-12 06:00:48,870 | INFO     | exeerrorcode: 0
[2025-10-12 02:10:47] 2025-10-12 06:00:48,870 | INFO     | exeerrordiag: 
[2025-10-12 02:10:47] 2025-10-12 06:00:48,870 | INFO     | exitcode: 0
[2025-10-12 02:10:47] 2025-10-12 06:00:48,871 | INFO     | exitmsg: OK
[2025-10-12 02:10:47] 2025-10-12 06:00:48,871 | INFO     | cpuconsumptiontime: 82903 s
[2025-10-12 02:10:47] 2025-10-12 06:00:48,871 | INFO     | nevents: 400
[2025-10-12 02:10:47] 2025-10-12 06:00:48,871 | INFO     | neventsw: 0
[2025-10-12 02:10:47] 2025-10-12 06:00:48,871 | INFO     | pid: 124714
[2025-10-12 02:10:47] 2025-10-12 06:00:48,871 | INFO     | pgrp: 124714
[2025-10-12 02:10:47] 2025-10-12 06:00:48,871 | INFO     | corecount: 9
[2025-10-12 02:10:47] 2025-10-12 06:00:48,872 | INFO     | event service: False
[2025-10-12 02:10:47] 2025-10-12 06:00:48,872 | INFO     | sizes: {0: 2348027, 1: 2348712, 2: 2348740, 6: 2348740, 8: 2348911, 9: 2348939, 21: 2349095, 34: 2349123, 46: 2349151, 58: 2349179, 70: 2349409, 72: 2349777, 83: 2
[2025-10-12 02:10:47] 2025-10-12 06:00:48,872 | INFO     | --------------------------------------------------
[2025-10-12 02:10:47] 2025-10-12 06:00:48,872 | INFO     | 
[2025-10-12 02:10:47] 2025-10-12 06:00:48,876 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 02:10:47] 2025-10-12 06:00:48,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,938 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,938 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,940 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:10:47] 2025-10-12 06:00:48,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,940 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:10:47] 2025-10-12 06:00:48,945 | INFO     | job 6837669137 has completed (purged errors)
[2025-10-12 02:10:47] 2025-10-12 06:00:48,945 | INFO     | overall cleanup function is called
[2025-10-12 02:10:47] 2025-10-12 06:00:49,959 | INFO     | --- collectZombieJob: --- 10, [124714]
[2025-10-12 02:10:47] 2025-10-12 06:00:49,960 | INFO     | zombie collector waiting for pid 124714
[2025-10-12 02:10:47] 2025-10-12 06:00:49,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:10:47] 2025-10-12 06:00:49,960 | INFO     | collected zombie processes
[2025-10-12 02:10:47] 2025-10-12 06:00:49,960 | INFO     | will attempt to kill all subprocesses of pid=124714
[2025-10-12 02:10:47] 2025-10-12 06:00:51,950 | INFO     | process IDs to be killed: [124714] (in reverse order)
[2025-10-12 02:10:47] 2025-10-12 06:00:53,124 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:10:47] 2025-10-12 06:00:53,124 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:10:47] 2025-10-12 06:00:53,389 | INFO     | did not find any defunct processes belonging to 124714
[2025-10-12 02:10:47] 2025-10-12 06:00:53,692 | INFO     | did not find any defunct processes belonging to 124714
[2025-10-12 02:10:47] 2025-10-12 06:00:53,692 | INFO     | ready for new job
[2025-10-12 02:10:47] 2025-10-12 06:00:53,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:10:47] 2025-10-12 06:00:53,772 | INFO     | ***************************************
[2025-10-12 02:10:47] 2025-10-12 06:00:53,773 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:10:47] 2025-10-12 06:00:53,773 | INFO     | ***************************************
[2025-10-12 02:10:47] 2025-10-12 06:00:53,773 | INFO     | 
[2025-10-12 02:10:47] 2025-10-12 06:00:53,823 | INFO     | architecture information:
[2025-10-12 02:10:47] 2025-10-12 06:00:53,888 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:10:47] 2025-10-12 06:00:54,169 | INFO     | cat /etc/os-release:
[2025-10-12 02:10:47] NAME="CentOS Linux"
[2025-10-12 02:10:47] VERSION="7 (Core)"
[2025-10-12 02:10:47] ID="centos"
[2025-10-12 02:10:47] ID_LIKE="rhel fedora"
[2025-10-12 02:10:47] VERSION_ID="7"
[2025-10-12 02:10:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:10:47] ANSI_COLOR="0;31"
[2025-10-12 02:10:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:10:47] HOME_URL="https://www.centos.org/"
[2025-10-12 02:10:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:10:47] 
[2025-10-12 02:10:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:10:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:10:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:10:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:10:47] 
[2025-10-12 02:10:47] 2025-10-12 06:00:54,194 | INFO     | ***************************************
[2025-10-12 02:10:47] 2025-10-12 06:00:54,697 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 02:10:47] 2025-10-12 06:00:54,858 | INFO     | sufficient remaining disk space (52159315968 B)
[2025-10-12 02:10:47] 2025-10-12 06:00:54,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:10:47] 2025-10-12 06:00:54,863 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:10:47] 2025-10-12 06:00:54,863 | INFO     | update_server=False
[2025-10-12 02:10:47] 2025-10-12 06:00:54,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:10:47] 2025-10-12 06:00:54,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:10:47] 2025-10-12 06:00:54,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:10:47] 2025-10-12 06:00:55,032 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 02:10:47] 2025-10-12 06:00:55,033 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 02:10:47] 2025-10-12 06:00:55,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:10:47] 2025-10-12 06:00:55,033 | INFO     | will abort loop
[2025-10-12 02:10:47] 2025-10-12 06:00:55,573 | INFO     | all job control threads have been joined
[2025-10-12 02:10:47] 2025-10-12 06:00:55,670 | INFO     | all data control threads have been joined
[2025-10-12 02:10:47] 2025-10-12 06:00:55,870 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:55,882 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:55,947 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:56,039 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:56,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:56,182 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:56,194 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:56,251 | INFO     | all payload control threads have been joined
[2025-10-12 02:10:47] 2025-10-12 06:00:56,629 | INFO     | [job] validate thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:56,648 | INFO     | [job] control thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:56,691 | INFO     | [data] control thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:56,870 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:56,963 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:57,000 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:57,199 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:57,257 | INFO     | [payload] control thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:00:57,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:10:47] 2025-10-12 06:01:01,909 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:10:47] 2025-10-12 06:01:15,561 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:10:47] 2025-10-12 06:01:16,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139795806046016)>', '<ExcThread(monitor, started 139794726246144)>']
[2025-10-12 02:10:47] 2025-10-12 06:01:21,689 | INFO     | all workflow threads have been joined
[2025-10-12 02:10:47] 2025-10-12 06:01:21,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:10:47] 2025-10-12 06:01:21,690 | INFO     | traces error code: 0
[2025-10-12 02:10:47] 2025-10-12 06:01:21,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:10:47] 2025-10-12 06:01:26,319 | INFO     | PID=110493 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 02:10:47] 2025-10-12 06:01:26,319 | INFO     | .. there are 9 such processes running
[2025-10-12 02:10:47] 2025-10-12 06:01:26,319 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:10:47] 2025-10-12 06:01:26,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:10:47] 2025-10-12 06:01:26,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:10:47] 2025-10-12 06:01:26,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:10:47] 2025-10-12 06:01:26,320 | INFO     | [monitor] control thread has ended
[2025-10-12 02:10:47] 2025-10-12 06:01:26,956 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:10:47] 2025-10-12 06:01:27,013 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:10:47] 2025-10-12 06:01:27,069 [wrapper] pilotpid: 110493
[2025-10-12 02:10:47] 2025-10-12 06:01:27,131 [wrapper] Pilot exit status: 0
[2025-10-12 02:10:47] 2025-10-12 06:01:27,321 [wrapper] pandaids: 6837669137
[2025-10-12 02:10:47] 2025-10-12 06:01:28,374 [wrapper] cleanup supervisor_pilot 2194495 110494
[2025-10-12 02:10:47] 2025-10-12 06:01:28,554 [wrapper] Test setup, not cleaning
[2025-10-12 02:10:47] 2025-10-12 06:01:28,613 [wrapper] apfmon messages muted
[2025-10-12 02:10:47] 2025-10-12 06:01:28,682 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:10:47] 2025-10-12 06:01:28,751 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:10:47]  *** Error codes and diagnostics ***
[2025-10-12 02:10:47]     "exeErrorCode": 0,
[2025-10-12 02:10:47]     "exeErrorDiag": "",
[2025-10-12 02:10:47]     "pilotErrorCode": 0,
[2025-10-12 02:10:47]     "pilotErrorDiag": "",
[2025-10-12 02:10:47]  *** Listing of results directory ***
[2025-10-12 02:10:47] total 442672
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 12:15 pilot3.tar.gz
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 12:31 queuedata.json
[2025-10-12 02:10:47] -rwx------. 1 boincer umatlas     36292 Oct 10 12:31 runpilot2-wrapper.sh
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:10:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:02 run_atlas
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:02 job.xml
[2025-10-12 02:10:47] -rw-r--r--. 2 boincer umatlas 223569436 Oct 11 00:02 EVNT.46676267._001684.pool.root.1
[2025-10-12 02:10:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:02 shared
[2025-10-12 02:10:47] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 00:02 input.tar.gz
[2025-10-12 02:10:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:02 boinc_lockfile
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 00:02 pandaJob.out
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas    975509 Oct 11 00:04 agis_schedconf.cvmfs.json
[2025-10-12 02:10:47] drwx------. 5 boincer umatlas      4096 Oct 11 00:05 pilot3
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas 201869992 Oct 12 01:55 HITS.46676269._041537.pool.root.1
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas       531 Oct 12 01:55 boinc_task_state.xml
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas      1042 Oct 12 01:58 memory_monitor_summary.json
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas   1560580 Oct 12 01:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas   1406722 Oct 12 01:58 log.46676269._041537.job.log.tgz.1
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas        95 Oct 12 02:00 pilot_heartbeat.json
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas      7822 Oct 12 02:00 heartbeat.json
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas       821 Oct 12 02:01 pilotlog.txt
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas  10571427 Oct 12 02:01 log.46676269._041537.job.log.1
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas       357 Oct 12 02:01 output.list
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas       620 Oct 12 02:01 runtime_log
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas  12001280 Oct 12 02:01 result.tar.gz
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 02:01 runtime_log.err
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas       658 Oct 12 02:01 6C0NDm4CVR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5pdNDmO3Arpm.diag
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas        28 Oct 12 02:10 wrapper_checkpoint.txt
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas      6524 Oct 12 02:10 init_data.xml
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 02:10 boinc_mmap_file
[2025-10-12 02:10:47] -rw-r--r--. 1 boincer umatlas     21357 Oct 12 02:10 stderr.txt
[2025-10-12 02:10:47] HITS file was successfully produced:
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas 201869992 Oct 12 01:55 shared/HITS.pool.root.1
[2025-10-12 02:10:47]  *** Contents of shared directory: ***
[2025-10-12 02:10:47] total 427772
[2025-10-12 02:10:47] -rw-r--r--. 2 boincer umatlas 223569436 Oct 11 00:02 ATLAS.root_0
[2025-10-12 02:10:47] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 00:02 input.tar.gz
[2025-10-12 02:10:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas 201869992 Oct 12 01:55 HITS.pool.root.1
[2025-10-12 02:10:47] -rw-------. 1 boincer umatlas  12001280 Oct 12 02:01 result.tar.gz
02:10:50 (99085): run_atlas exited; CPU time 86082.786231
02:10:50 (99085): called boinc_finish(0)

</stderr_txt>
]]>

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