Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:01:17 (501954): wrapper (7.7.26015): starting
19:01:17 (501954): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 19:01:17] Arguments: --nthreads 12
[2025-10-10 19:01:17] Threads: 12
[2025-10-10 19:01:17] Checking for CVMFS
[2025-10-10 19:01:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 19:01:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 19:01:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 19:01:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 19:01:18] 2.11.5.0 2582 29390 219868 151567 2 454 30951084 45568001 24630 130560 0 311439135 99.882 115202042 8727 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 19:01:18] CVMFS is ok
[2025-10-10 19:01:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 19:01:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 19:01:18] Further information can be found at the LHC@home message board.
[2025-10-10 19:01:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 19:01:18] Checking for apptainer binary...
[2025-10-10 19:01:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 19:01:18] Running /usr/bin/apptainer --version
[2025-10-10 19:01:18] apptainer version 1.4.1-1.el9
[2025-10-10 19:01:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 19:01:18] wns0047.triumf.lcg
[2025-10-10 19:01:18] apptainer works
[2025-10-10 19:01:18] Set ATHENA_PROC_NUMBER=12
[2025-10-10 19:01:18] Set ATHENA_CORE_NUMBER=12
[2025-10-10 19:01:18] Starting ATLAS job with PandaID=6837873617
[2025-10-10 19:01:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 19:07:22]  *** The last 200 lines of the pilot log: ***
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | WARNING  | wrong length of table data, x=[1760148239.0], y=[16442.0] (must be same and length>=4)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | could have reported an average CPU frequency of 2683 MHz (4 samples)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | ..............................
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . Timing measurements:
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . get job = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . initial setup = 5 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . payload setup = 29 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . stage-in = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . payload execution = 60 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . stage-out = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | . log creation = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | ..............................
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837873617/pilotlog.txt
[2025-10-10 19:07:22] 2025-10-11 02:06:50,035 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 19:07:22] - Log from pilotlog.txt -
[2025-10-10 19:07:22] 2025-10-11 02:06:50,008 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837873617/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | INFO     | extracted standard info from prmon json
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | WARNING  | wrong length of table data, x=[1760148239.0], y=[16442.0] (must be same and length>=4)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | could have reported an average CPU frequency of 2683 MHz (4 samples)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | ..............................
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . Timing measurements:
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . get job = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . initial setup = 5 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . payload setup = 29 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . stage-in = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . payload execution = 60 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . stage-out = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | . log creation = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | ..............................
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837873617/pilotlog.txt
[2025-10-10 19:07:22] 2025-10-11 02:06:50,035 | WARNING  | 
[2025-10-10 19:07:22] [begin log extracts]
[2025-10-10 19:07:22] - Log from pilotlog.txt -
[2025-10-10 19:07:22] 2025-10-11 02:06:50,008 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837873617/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | INFO     | extracted standard info from prmon json
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 19:07:22] 2025-10-11 02:06:50,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | WARNING  | wrong length of table data, x=[1760148239.0], y=[16442.0] (must be same and length>=4)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | could have reported an average CPU frequency of 2683 MHz (4 samples)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | ..............................
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . Timing measurements:
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . get job = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . initial setup = 5 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . payload setup = 29 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . stage-in = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . payload execution = 60 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,010 | INFO     | . stage-out = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | . log creation = 0 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | ..............................
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 19:07:22] 2025-10-11 02:06:50,011 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837873617/pilotlog.txt
[2025-10-10 19:07:22] [end log extracts]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,035 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,036 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | 
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | job summary report
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | --------------------------------------------------
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | PanDA job id: 6837873617
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | task id: 46676269
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 19:04:22,218 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | pilot state: failed 
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | transexitcode: 65
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | exeerrorcode: 65
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | exitcode: 65
[2025-10-10 19:07:22] 2025-10-11 02:06:50,158 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | cpuconsumptiontime: 19 s
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | nevents: 0
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | neventsw: 0
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | pid: 512795
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | pgrp: 512795
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | corecount: 12
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | event service: False
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | sizes: {0: 2348029, 1: 2348711, 2: 2348910, 13: 2348910, 24: 2348966, 25: 2349256, 35: 2349412, 93: 2372697, 94: 2372673, 95: 2377021, 232: 2377159}
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | --------------------------------------------------
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | 
[2025-10-10 19:07:22] 2025-10-11 02:06:50,159 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 19:07:22] 2025-10-11 02:06:50,187 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 19:07:22] 2025-10-11 02:06:50,188 | INFO     | job 6837873617 has completed (purged errors)
[2025-10-10 19:07:22] 2025-10-11 02:06:50,189 | INFO     | overall cleanup function is called
[2025-10-10 19:07:22] 2025-10-11 02:06:51,195 | INFO     | --- collectZombieJob: --- 10, [512795]
[2025-10-10 19:07:22] 2025-10-11 02:06:51,195 | INFO     | zombie collector waiting for pid 512795
[2025-10-10 19:07:22] 2025-10-11 02:06:51,195 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 19:07:22] 2025-10-11 02:06:51,195 | INFO     | collected zombie processes
[2025-10-10 19:07:22] 2025-10-11 02:06:51,195 | INFO     | will attempt to kill all subprocesses of pid=512795
[2025-10-10 19:07:22] 2025-10-11 02:06:52,006 | INFO     | process IDs to be killed: [512795] (in reverse order)
[2025-10-10 19:07:22] 2025-10-11 02:06:52,413 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 19:07:22] 2025-10-11 02:06:52,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 19:07:22] 2025-10-11 02:06:52,482 | INFO     | did not find any defunct processes belonging to 512795
[2025-10-10 19:07:22] 2025-10-11 02:06:52,521 | INFO     | did not find any defunct processes belonging to 512795
[2025-10-10 19:07:22] 2025-10-11 02:06:52,521 | INFO     | ready for new job
[2025-10-10 19:07:22] 2025-10-11 02:06:52,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 19:07:22] 2025-10-11 02:06:52,522 | INFO     | ***************************************
[2025-10-10 19:07:22] 2025-10-11 02:06:52,523 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 19:07:22] 2025-10-11 02:06:52,523 | INFO     | ***************************************
[2025-10-10 19:07:22] 2025-10-11 02:06:52,523 | INFO     | 
[2025-10-10 19:07:22] 2025-10-11 02:06:52,547 | INFO     | architecture information:
[2025-10-10 19:07:22] 2025-10-11 02:06:52,562 | INFO     | executing command: cat /etc/os-release
[2025-10-10 19:07:22] 2025-10-11 02:06:52,607 | INFO     | cat /etc/os-release:
[2025-10-10 19:07:22] NAME="CentOS Linux"
[2025-10-10 19:07:22] VERSION="7 (Core)"
[2025-10-10 19:07:22] ID="centos"
[2025-10-10 19:07:22] ID_LIKE="rhel fedora"
[2025-10-10 19:07:22] VERSION_ID="7"
[2025-10-10 19:07:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 19:07:22] ANSI_COLOR="0;31"
[2025-10-10 19:07:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 19:07:22] HOME_URL="https://www.centos.org/"
[2025-10-10 19:07:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 19:07:22] 
[2025-10-10 19:07:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 19:07:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 19:07:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 19:07:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 19:07:22] 
[2025-10-10 19:07:22] 2025-10-11 02:06:52,608 | INFO     | ***************************************
[2025-10-10 19:07:22] 2025-10-11 02:06:53,120 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 19:07:22] 2025-10-11 02:06:53,237 | INFO     | sufficient remaining disk space (1770806837248 B)
[2025-10-10 19:07:22] 2025-10-11 02:06:53,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 19:07:22] 2025-10-11 02:06:53,238 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 19:07:22] 2025-10-11 02:06:53,238 | INFO     | update_server=False
[2025-10-10 19:07:22] 2025-10-11 02:06:53,238 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 19:07:22] 2025-10-11 02:06:53,270 | INFO     | all payload control threads have been joined
[2025-10-10 19:07:22] 2025-10-11 02:06:53,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:07:22] 2025-10-11 02:06:53,408 | INFO     | aborting loop
[2025-10-10 19:07:22] 2025-10-11 02:06:53,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 19:07:22] 2025-10-11 02:06:53,744 | INFO     | all job control threads have been joined
[2025-10-10 19:07:22] 2025-10-11 02:06:53,922 | INFO     | all data control threads have been joined
[2025-10-10 19:07:22] 2025-10-11 02:06:54,244 | INFO     | [job] retrieve thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:54,273 | INFO     | [payload] validate_post thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:54,276 | INFO     | [payload] control thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:54,414 | INFO     | [job] job monitor thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:54,526 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:54,750 | INFO     | [job] control thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:54,756 | INFO     | [data] copytool_in thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:54,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 19:07:22] 2025-10-11 02:06:54,821 | INFO     | [payload] failed_post thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:54,928 | INFO     | [data] control thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:55,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:07:22] 2025-10-11 02:06:55,293 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:55,603 | INFO     | [data] copytool_out thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:55,635 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:55,697 | INFO     | [job] validate thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:55,736 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:56,181 | INFO     | [job] queue monitor thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:06:58,812 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 19:07:22] 2025-10-11 02:07:01,674 | INFO     | [monitor] cgroup control has ended
[2025-10-10 19:07:22] 2025-10-11 02:07:02,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521070266176)>', '<ExcThread(monitor, started 140520256960256)>']
[2025-10-10 19:07:22] 2025-10-11 02:07:07,877 | INFO     | all workflow threads have been joined
[2025-10-10 19:07:22] 2025-10-11 02:07:07,877 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 19:07:22] 2025-10-11 02:07:07,878 | INFO     | traces error code: 0
[2025-10-10 19:07:22] 2025-10-11 02:07:07,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 19:07:22] 2025-10-11 02:07:21,820 | INFO     | PID=505799 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 19:07:22] 2025-10-11 02:07:21,820 | INFO     | .. there are 42 such processes running
[2025-10-10 19:07:22] 2025-10-11 02:07:21,820 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 19:07:22] 2025-10-11 02:07:21,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 19:07:22] 2025-10-11 02:07:21,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 19:07:22] 2025-10-11 02:07:21,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 19:07:22] 2025-10-11 02:07:21,821 | CRITICAL | thread 'MainThread' is not alive
[2025-10-10 19:07:22] 2025-10-11 02:07:21,821 | INFO     | [monitor] control thread has ended
[2025-10-10 19:07:22] 2025-10-11 02:07:22,001 [wrapper] ==== pilot stdout END ====
[2025-10-10 19:07:22] 2025-10-11 02:07:22,026 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 19:07:22] 2025-10-11 02:07:22,042 [wrapper] pilotpid: 505799
[2025-10-10 19:07:22] 2025-10-11 02:07:22,083 [wrapper] Pilot exit status: 0
[2025-10-10 19:07:22] 2025-10-11 02:07:22,213 [wrapper] pandaids: 6837873617
[2025-10-10 19:07:22] 2025-10-11 02:07:22,415 [wrapper] cleanup supervisor_pilot  505805 505800
[2025-10-10 19:07:22] 2025-10-11 02:07:22,432 [wrapper] Test setup, not cleaning
[2025-10-10 19:07:22] 2025-10-11 02:07:22,469 [wrapper] apfmon messages muted
[2025-10-10 19:07:22] 2025-10-11 02:07:22,478 [wrapper] ==== wrapper stdout END ====
[2025-10-10 19:07:22] 2025-10-11 02:07:22,491 [wrapper] ==== wrapper stderr END ====
[2025-10-10 19:07:22]  *** Error codes and diagnostics ***
[2025-10-10 19:07:22]     "exeErrorCode": 65,
[2025-10-10 19:07:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 19:07:22]     "pilotErrorCode": 1305,
[2025-10-10 19:07:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 19:07:22]  *** Listing of results directory ***
[2025-10-10 19:07:22] total 221872
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc    557409 Oct 10 15:34 pilot3.tar.gz
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc      5112 Oct 10 15:48 queuedata.json
[2025-10-10 19:07:22] -rwx------. 1 boinc boinc     36292 Oct 10 15:49 runpilot2-wrapper.sh
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc       100 Oct 10 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 19:07:22] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 19:01 run_atlas
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc       105 Oct 10 19:01 job.xml
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc      6594 Oct 10 19:01 init_data.xml
[2025-10-10 19:07:22] -rw-r--r--. 2 boinc boinc 223060879 Oct 10 19:01 EVNT.46676267._001877.pool.root.1
[2025-10-10 19:07:22] -rw-r--r--. 2 boinc boinc     15120 Oct 10 19:01 start_atlas.sh
[2025-10-10 19:07:22] drwxrwx--x. 2 boinc boinc      4096 Oct 10 19:01 shared
[2025-10-10 19:07:22] -rw-r--r--. 2 boinc boinc    569678 Oct 10 19:01 input.tar.gz
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc         0 Oct 10 19:01 boinc_lockfile
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc      2550 Oct 10 19:01 pandaJob.out
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc    975517 Oct 10 19:01 agis_schedconf.cvmfs.json
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc   1560580 Oct 10 19:01 agis_ddmendpoints.agis.ALL.json
[2025-10-10 19:07:22] drwx------. 5 boinc boinc      4096 Oct 10 19:02 pilot3
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc       968 Oct 10 19:04 memory_monitor_summary.json
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc     22477 Oct 10 19:04 log.46676269._046469.job.log.tgz.1
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc      8425 Oct 10 19:06 heartbeat.json
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc       524 Oct 10 19:07 boinc_task_state.xml
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc        22 Oct 10 19:07 wrapper_checkpoint.txt
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc        95 Oct 10 19:07 pilot_heartbeat.json
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc       892 Oct 10 19:07 pilotlog.txt
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc      8192 Oct 10 19:07 boinc_mmap_file
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc     95562 Oct 10 19:07 log.46676269._046469.job.log.1
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc       188 Oct 10 19:07 output.list
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc       620 Oct 10 19:07 runtime_log
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc    133120 Oct 10 19:07 result.tar.gz
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc       644 Oct 10 19:07 uaBNDmj6aR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNkQMDmeKOe8n.diag
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc      8528 Oct 10 19:07 runtime_log.err
[2025-10-10 19:07:22] -rw-r--r--. 1 boinc boinc     21812 Oct 10 19:07 stderr.txt
[2025-10-10 19:07:22] No HITS result produced
[2025-10-10 19:07:22]  *** Contents of shared directory: ***
[2025-10-10 19:07:22] total 218548
[2025-10-10 19:07:22] -rw-r--r--. 2 boinc boinc 223060879 Oct 10 19:01 ATLAS.root_0
[2025-10-10 19:07:22] -rw-r--r--. 2 boinc boinc     15120 Oct 10 19:01 start_atlas.sh
[2025-10-10 19:07:22] -rw-r--r--. 2 boinc boinc    569678 Oct 10 19:01 input.tar.gz
[2025-10-10 19:07:22] -rw-------. 1 boinc boinc    133120 Oct 10 19:07 result.tar.gz
19:07:24 (501954): run_atlas exited; CPU time 31.034529
19:07:24 (501954): called boinc_finish(0)

</stderr_txt>
]]>

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