Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:55 (4032324): wrapper (7.7.26015): starting
09:35:55 (4032324): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 09:35:55] Arguments: --nthreads 4
[2025-10-12 09:35:55] Threads: 4
[2025-10-12 09:35:55] Checking for CVMFS
[2025-10-12 09:35:55] No cvmfs_config command found, will try listing directly
[2025-10-12 09:35:55] CVMFS is ok
[2025-10-12 09:35:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:35:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:35:55] Further information can be found at the LHC@home message board.
[2025-10-12 09:35:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:35:55] Checking for apptainer binary...
[2025-10-12 09:35:55] which: no apptainer in ((null))
[2025-10-12 09:35:55] apptainer is not installed, using version from CVMFS
[2025-10-12 09:35:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:35:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-10-12 09:35:55] apptainer works
[2025-10-12 09:35:55] Set ATHENA_PROC_NUMBER=4
[2025-10-12 09:35:55] Set ATHENA_CORE_NUMBER=4
[2025-10-12 09:35:55] Starting ATLAS job with PandaID=6837731540
[2025-10-12 09:35:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:37:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:37:15] 2025-10-12 10:22:32,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:37:15] 2025-10-12 10:22:33,650 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 12:37:15] 2025-10-12 10:22:33,722 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2715.1272031250005
[2025-10-12 12:37:15] 2025-10-12 10:22:33,756 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6837731540/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:37:15] 2025-10-12 10:22:33,757 | INFO     | extracted standard info from prmon json
[2025-10-12 12:37:15] 2025-10-12 10:22:33,758 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:37:15] 2025-10-12 10:22:33,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:37:15] 2025-10-12 10:22:33,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:37:15] 2025-10-12 10:22:33,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:37:15] 2025-10-12 10:22:33,763 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:37:15] 2025-10-12 10:22:33,763 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,764 | INFO     | sum of deviations: 17155641159.000011
[2025-10-12 12:37:15] 2025-10-12 10:22:33,764 | INFO     | mean x: 1760259545.0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,764 | INFO     | mean y: 2314189.392638037
[2025-10-12 12:37:15] 2025-10-12 10:22:33,764 | INFO     | -- intersect: -22486096848.406815
[2025-10-12 12:37:15] 2025-10-12 10:22:33,764 | INFO     | intersect: -22486096848.406815
[2025-10-12 12:37:15] 2025-10-12 10:22:33,765 | INFO     | chi2: 1.2617306940540602
[2025-10-12 12:37:15] 2025-10-12 10:22:33,765 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 12:37:15] 2025-10-12 10:22:33,766 | INFO     | sum of deviations: 16574361545.000004
[2025-10-12 12:37:15] 2025-10-12 10:22:33,766 | INFO     | mean x: 1760259392.5
[2025-10-12 12:37:15] 2025-10-12 10:22:33,766 | INFO     | mean y: 2313449.493670886
[2025-10-12 12:37:15] 2025-10-12 10:22:33,766 | INFO     | -- intersect: -23852783766.7846
[2025-10-12 12:37:15] 2025-10-12 10:22:33,766 | INFO     | intersect: -23852783766.7846
[2025-10-12 12:37:15] 2025-10-12 10:22:33,766 | INFO     | chi2: 1.2627831082192174
[2025-10-12 12:37:15] 2025-10-12 10:22:33,767 | INFO     | current chi2=1.2627831082192174 (change=-0.08341036404334473 %)
[2025-10-12 12:37:15] 2025-10-12 10:22:33,767 | INFO     | right removable region: 157
[2025-10-12 12:37:15] 2025-10-12 10:22:33,767 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 12:37:15] 2025-10-12 10:22:33,768 | INFO     | sum of deviations: -2778767770.0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,768 | INFO     | mean x: 1760259697.5
[2025-10-12 12:37:15] 2025-10-12 10:22:33,768 | INFO     | mean y: 2339163.481012658
[2025-10-12 12:37:15] 2025-10-12 10:22:33,768 | INFO     | -- intersect: 4001756371.8310513
[2025-10-12 12:37:15] 2025-10-12 10:22:33,768 | INFO     | intersect: 4001756371.8310513
[2025-10-12 12:37:15] 2025-10-12 10:22:33,768 | INFO     | chi2: 0.007228418836455977
[2025-10-12 12:37:15] 2025-10-12 10:22:33,768 | INFO     | current chi2=0.007228418836455977 (change=99.42710287777572 %)
[2025-10-12 12:37:15] 2025-10-12 10:22:33,769 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,769 | INFO     | sum of deviations: -2950921177.0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,770 | INFO     | mean x: 1760259850.0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,770 | INFO     | mean y: 2339392.359477124
[2025-10-12 12:37:15] 2025-10-12 10:22:33,770 | INFO     | -- intersect: 4679693268.439638
[2025-10-12 12:37:15] 2025-10-12 10:22:33,770 | INFO     | intersect: 4679693268.439638
[2025-10-12 12:37:15] 2025-10-12 10:22:33,770 | INFO     | chi2: 0.006833143738686558
[2025-10-12 12:37:15] 2025-10-12 10:22:33,770 | INFO     | current chi2=0.006833143738686558 (change=5.468348012374149 %)
[2025-10-12 12:37:15] 2025-10-12 10:22:33,770 | INFO     | left removable region: 20
[2025-10-12 12:37:15] 2025-10-12 10:22:33,770 | INFO     | sum of square deviations: 797291228.0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,771 | INFO     | sum of deviations: -1737889024.0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,771 | INFO     | mean x: 1760259972.0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,771 | INFO     | mean y: 2337544.5036496352
[2025-10-12 12:37:15] 2025-10-12 10:22:33,771 | INFO     | -- intersect: 3839249801.0189657
[2025-10-12 12:37:15] 2025-10-12 10:22:33,771 | INFO     | intersect: 3839249801.0189657
[2025-10-12 12:37:15] 2025-10-12 10:22:33,772 | INFO     | chi2: 0.005868817450274287
[2025-10-12 12:37:15] 2025-10-12 10:22:33,772 | INFO     | -- intersect: 3839249801.0189657
[2025-10-12 12:37:15] 2025-10-12 10:22:33,772 | INFO     | current memory leak: -2.18 B/s (using 137 data points, chi2=0.01)
[2025-10-12 12:37:15] 2025-10-12 10:22:33,772 | INFO     | could have reported an average CPU frequency of 2700 MHz (9 samples)
[2025-10-12 12:37:15] 2025-10-12 10:22:33,772 | INFO     | ..............................
[2025-10-12 12:37:15] 2025-10-12 10:22:33,772 | INFO     | . Timing measurements:
[2025-10-12 12:37:15] 2025-10-12 10:22:33,772 | INFO     | . get job = 0 s
[2025-10-12 12:37:15] 2025-10-12 10:22:33,773 | INFO     | . initial setup = 1 s
[2025-10-12 12:37:15] 2025-10-12 10:22:33,773 | INFO     | . payload setup = 8 s
[2025-10-12 12:37:15] 2025-10-12 10:22:33,773 | INFO     | . stage-in = 0 s
[2025-10-12 12:37:15] 2025-10-12 10:22:33,773 | INFO     | . payload execution = 9945 s
[2025-10-12 12:37:15] 2025-10-12 10:22:33,773 | INFO     | . stage-out = 0 s
[2025-10-12 12:37:15] 2025-10-12 10:22:33,773 | INFO     | . log creation = 0 s
[2025-10-12 12:37:15] 2025-10-12 10:22:33,773 | INFO     | ..............................
[2025-10-12 12:37:15] 2025-10-12 10:22:33,876 | INFO     | 
[2025-10-12 12:37:15] 2025-10-12 10:22:33,877 | INFO     | job summary report
[2025-10-12 12:37:15] 2025-10-12 10:22:33,877 | INFO     | --------------------------------------------------
[2025-10-12 12:37:15] 2025-10-12 10:22:33,877 | INFO     | PanDA job id: 6837731540
[2025-10-12 12:37:15] 2025-10-12 10:22:33,877 | INFO     | task id: 46676269
[2025-10-12 12:37:15] 2025-10-12 10:22:33,877 | INFO     | errors: (none)
[2025-10-12 12:37:15] 2025-10-12 10:22:33,877 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:37:15] 2025-10-12 10:22:33,877 | INFO     | pilot state: finished 
[2025-10-12 12:37:15] 2025-10-12 10:22:33,877 | INFO     | transexitcode: 0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | exeerrorcode: 0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | exeerrordiag: 
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | exitcode: 0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | exitmsg: OK
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | cpuconsumptiontime: 38107 s
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | nevents: 400
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | neventsw: 0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | pid: 4115212
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | pgrp: 4115212
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | corecount: 4
[2025-10-12 12:37:15] 2025-10-12 10:22:33,878 | INFO     | event service: False
[2025-10-12 12:37:15] 2025-10-12 10:22:33,879 | INFO     | sizes: {0: 2348869, 1: 2348869, 7: 2349159, 11: 2349187, 9957: 2378239, 9958: 2387261, 9960: 2387445, 9966: 2387703}
[2025-10-12 12:37:15] 2025-10-12 10:22:33,879 | INFO     | --------------------------------------------------
[2025-10-12 12:37:15] 2025-10-12 10:22:33,879 | INFO     | 
[2025-10-12 12:37:15] 2025-10-12 10:22:33,879 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-10-12 12:37:15] 2025-10-12 10:22:33,908 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,909 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,909 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,909 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,911 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:37:15] 2025-10-12 10:22:33,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:37:15] 2025-10-12 10:22:33,911 | INFO     | job 6837731540 has completed (purged errors)
[2025-10-12 12:37:15] 2025-10-12 10:22:33,911 | INFO     | overall cleanup function is called
[2025-10-12 12:37:15] 2025-10-12 10:22:33,950 | INFO     | PID=4055572 has CPU usage=15.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 12:37:15] 2025-10-12 10:22:33,950 | INFO     | .. there are 12 such processes running
[2025-10-12 12:37:15] 2025-10-12 10:22:34,922 | INFO     | --- collectZombieJob: --- 10, [4115212]
[2025-10-12 12:37:15] 2025-10-12 10:22:34,923 | INFO     | zombie collector waiting for pid 4115212
[2025-10-12 12:37:15] 2025-10-12 10:22:34,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:37:15] 2025-10-12 10:22:34,923 | INFO     | collected zombie processes
[2025-10-12 12:37:15] 2025-10-12 10:22:34,923 | INFO     | will attempt to kill all subprocesses of pid=4115212
[2025-10-12 12:37:15] 2025-10-12 10:22:35,714 | INFO     | process IDs to be killed: [4115212] (in reverse order)
[2025-10-12 12:37:15] 2025-10-12 10:22:35,959 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:37:15] 2025-10-12 10:22:35,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:37:15] 2025-10-12 10:22:35,990 | INFO     | did not find any defunct processes belonging to 4115212
[2025-10-12 12:37:15] 2025-10-12 10:22:36,016 | INFO     | did not find any defunct processes belonging to 4115212
[2025-10-12 12:37:15] 2025-10-12 10:22:36,017 | INFO     | ready for new job
[2025-10-12 12:37:15] 2025-10-12 10:22:36,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:37:15] 2025-10-12 10:22:36,019 | INFO     | ***************************************
[2025-10-12 12:37:15] 2025-10-12 10:22:36,019 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:37:15] 2025-10-12 10:22:36,019 | INFO     | ***************************************
[2025-10-12 12:37:15] 2025-10-12 10:22:36,020 | INFO     | 
[2025-10-12 12:37:15] 2025-10-12 10:22:36,028 | INFO     | architecture information:
[2025-10-12 12:37:15] 2025-10-12 10:22:36,028 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:37:15] 2025-10-12 10:22:36,046 | INFO     | cat /etc/os-release:
[2025-10-12 12:37:15] NAME="CentOS Linux"
[2025-10-12 12:37:15] VERSION="7 (Core)"
[2025-10-12 12:37:15] ID="centos"
[2025-10-12 12:37:15] ID_LIKE="rhel fedora"
[2025-10-12 12:37:15] VERSION_ID="7"
[2025-10-12 12:37:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:37:15] ANSI_COLOR="0;31"
[2025-10-12 12:37:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:37:15] HOME_URL="https://www.centos.org/"
[2025-10-12 12:37:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:37:15] 
[2025-10-12 12:37:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:37:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:37:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:37:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:37:15] 
[2025-10-12 12:37:15] 2025-10-12 10:22:36,047 | INFO     | ***************************************
[2025-10-12 12:37:15] 2025-10-12 10:22:36,549 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-10-12 12:37:15] 2025-10-12 10:22:36,572 | INFO     | sufficient remaining disk space (3326329487360 B)
[2025-10-12 12:37:15] 2025-10-12 10:22:36,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:37:15] 2025-10-12 10:22:36,573 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:37:15] 2025-10-12 10:22:36,573 | INFO     | update_server=False
[2025-10-12 12:37:15] 2025-10-12 10:22:36,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:37:15] 2025-10-12 10:22:36,573 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:37:15] 2025-10-12 10:22:36,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:37:15] 2025-10-12 10:22:36,574 | INFO     | aborting loop
[2025-10-12 12:37:15] 2025-10-12 10:22:36,866 | INFO     | all data control threads have been joined
[2025-10-12 12:37:15] 2025-10-12 10:22:37,173 | INFO     | all job control threads have been joined
[2025-10-12 12:37:15] 2025-10-12 10:22:37,578 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:37,579 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:37,638 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:37,843 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:37,868 | INFO     | [data] control thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:38,039 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:38,077 | INFO     | all payload control threads have been joined
[2025-10-12 12:37:15] 2025-10-12 10:22:38,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:37:15] 2025-10-12 10:22:38,178 | INFO     | [job] control thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:38,542 | INFO     | [job] validate thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:38,543 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:38,579 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:38,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:38,868 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:38,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:37:15] 2025-10-12 10:22:39,017 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:39,082 | INFO     | [payload] control thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:39,891 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:22:42,131 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:37:15] 2025-10-12 10:23:06,986 | INFO     | PID=4055572 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:37:15] 2025-10-12 10:23:06,987 | INFO     | .. there are 12 such processes running
[2025-10-12 12:37:15] 2025-10-12 10:23:06,988 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:37:15] 2025-10-12 10:23:06,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:37:15] 2025-10-12 10:23:06,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:37:15] 2025-10-12 10:23:25,388 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:37:15] 2025-10-12 10:23:26,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22955599984448)>', '<ExcThread(monitor, started 22955358643968)>']
[2025-10-12 12:37:15] 2025-10-12 10:23:27,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:37:15] 2025-10-12 10:23:27,071 | INFO     | [monitor] control thread has ended
[2025-10-12 12:37:15] 2025-10-12 10:23:31,307 | INFO     | all workflow threads have been joined
[2025-10-12 12:37:15] 2025-10-12 10:23:31,308 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:37:15] 2025-10-12 10:23:31,308 | INFO     | traces error code: 0
[2025-10-12 12:37:15] 2025-10-12 10:23:31,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:37:15] 2025-10-12 10:23:31,445 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:37:15] 2025-10-12 10:23:31,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:37:15] 2025-10-12 10:23:31,453 [wrapper] pilotpid: 4055572
[2025-10-12 12:37:15] 2025-10-12 10:23:31,456 [wrapper] Pilot exit status: 0
[2025-10-12 12:37:15] 2025-10-12 10:23:31,472 [wrapper] pandaids: 6837731540
[2025-10-12 12:37:15] 2025-10-12 10:23:31,649 [wrapper] cleanup supervisor_pilot  311583 4055575
[2025-10-12 12:37:15] 2025-10-12 10:23:31,653 [wrapper] Test setup, not cleaning
[2025-10-12 12:37:15] 2025-10-12 10:23:31,656 [wrapper] apfmon messages muted
[2025-10-12 12:37:15] 2025-10-12 10:23:31,659 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:37:15] 2025-10-12 10:23:31,663 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:37:15]  *** Error codes and diagnostics ***
[2025-10-12 12:37:15]     "exeErrorCode": 0,
[2025-10-12 12:37:15]     "exeErrorDiag": "",
[2025-10-12 12:37:15]     "pilotErrorCode": 0,
[2025-10-12 12:37:15]     "pilotErrorDiag": "",
[2025-10-12 12:37:15]  *** Listing of results directory ***
[2025-10-12 12:37:15] total 417640
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc    557409 Oct 10 21:36 pilot3.tar.gz
[2025-10-12 12:37:15] -rwx------ 1 boinc boinc     36292 Oct 10 21:45 runpilot2-wrapper.sh
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc      5112 Oct 10 21:45 queuedata.json
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc       100 Oct 12 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:37:15] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 09:35 run_atlas
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc       105 Oct 12 09:35 job.xml
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc      6687 Oct 12 09:35 init_data.xml
[2025-10-12 12:37:15] -rw-r--r-- 2 boinc boinc 221447531 Oct 12 09:35 EVNT.46676267._001789.pool.root.1
[2025-10-12 12:37:15] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:35 start_atlas.sh
[2025-10-12 12:37:15] drwxrwx--x 2 boinc boinc      4096 Oct 12 09:35 shared
[2025-10-12 12:37:15] -rw-r--r-- 2 boinc boinc    569677 Oct 12 09:35 input.tar.gz
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc         0 Oct 12 09:35 boinc_lockfile
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc      2550 Oct 12 09:35 pandaJob.out
[2025-10-12 12:37:15] -rw------- 1 boinc boinc    975520 Oct 12 09:36 agis_schedconf.cvmfs.json
[2025-10-12 12:37:15] -rw------- 1 boinc boinc   1560580 Oct 12 09:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:37:15] drwx------ 5 boinc boinc      4096 Oct 12 09:36 pilot3
[2025-10-12 12:37:15] -rw------- 1 boinc boinc 198804932 Oct 12 12:21 HITS.46676269._044215.pool.root.1
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc       528 Oct 12 12:21 boinc_task_state.xml
[2025-10-12 12:37:15] -rw------- 1 boinc boinc      1032 Oct 12 12:22 memory_monitor_summary.json
[2025-10-12 12:37:15] -rw------- 1 boinc boinc    354376 Oct 12 12:22 log.46676269._044215.job.log.tgz.1
[2025-10-12 12:37:15] -rw------- 1 boinc boinc      7789 Oct 12 12:22 heartbeat.json
[2025-10-12 12:37:15] -rw------- 1 boinc boinc        95 Oct 12 12:23 pilot_heartbeat.json
[2025-10-12 12:37:15] -rw------- 1 boinc boinc      4836 Oct 12 12:23 pilotlog.txt
[2025-10-12 12:37:15] -rw------- 1 boinc boinc   1394754 Oct 12 12:23 log.46676269._044215.job.log.1
[2025-10-12 12:37:15] -rw------- 1 boinc boinc       357 Oct 12 12:23 output.list
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:23 runtime_log
[2025-10-12 12:37:15] -rw------- 1 boinc boinc   1771520 Oct 12 12:23 result.tar.gz
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc      9085 Oct 12 12:23 runtime_log.err
[2025-10-12 12:37:15] -rw------- 1 boinc boinc       665 Oct 12 12:23 kQBLDmMEYR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMIeNDmIficyn.diag
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc        26 Oct 12 12:36 wrapper_checkpoint.txt
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc      8192 Oct 12 12:37 boinc_mmap_file
[2025-10-12 12:37:15] -rw-r--r-- 1 boinc boinc     21012 Oct 12 12:37 stderr.txt
[2025-10-12 12:37:15] HITS file was successfully produced:
[2025-10-12 12:37:15] -rw------- 1 boinc boinc 198804932 Oct 12 12:21 shared/HITS.pool.root.1
[2025-10-12 12:37:15]  *** Contents of shared directory: ***
[2025-10-12 12:37:15] total 412724
[2025-10-12 12:37:15] -rw-r--r-- 2 boinc boinc 221447531 Oct 12 09:35 ATLAS.root_0
[2025-10-12 12:37:15] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:35 start_atlas.sh
[2025-10-12 12:37:15] -rw-r--r-- 2 boinc boinc    569677 Oct 12 09:35 input.tar.gz
[2025-10-12 12:37:15] -rw------- 1 boinc boinc 198804932 Oct 12 12:21 HITS.pool.root.1
[2025-10-12 12:37:15] -rw------- 1 boinc boinc   1771520 Oct 12 12:23 result.tar.gz
12:37:16 (4032324): run_atlas exited; CPU time 38753.263221
12:37:16 (4032324): called boinc_finish(0)

</stderr_txt>
]]>

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