Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:25 (1459551): wrapper (7.7.26015): starting
00:03:25 (1459551): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 00:03:25] Arguments: --nthreads 12
[2025-10-11 00:03:25] Threads: 12
[2025-10-11 00:03:25] Checking for CVMFS
[2025-10-11 00:03:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:03:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:03:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:03:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:03:30] 2.13.2.0 21981 50937 124528 151571 1 26 33284397 40960000 11466 16776704 0 42938664 99.722 31924247 34438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:03:30] CVMFS is ok
[2025-10-11 00:03:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:03:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:03:30] Further information can be found at the LHC@home message board.
[2025-10-11 00:03:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:03:30] Checking for apptainer binary...
[2025-10-11 00:03:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:03:30] Running /usr/bin/apptainer --version
[2025-10-11 00:03:33] apptainer version 1.4.3-1.el9
[2025-10-11 00:03:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:03:36] c-211-7.aglt2.org
[2025-10-11 00:03:36] apptainer works
[2025-10-11 00:03:37] Set ATHENA_PROC_NUMBER=12
[2025-10-11 00:03:37] Set ATHENA_CORE_NUMBER=12
[2025-10-11 00:03:37] Starting ATLAS job with PandaID=6837730910
[2025-10-11 00:03:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:13:49]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:13:49] 2025-10-11 13:13:07,373 | INFO     | sum of square deviations: 45901127406.69146
[2025-10-11 09:13:49] 2025-10-11 13:13:07,447 | INFO     | sum of deviations: 597524932217.0563
[2025-10-11 09:13:49] 2025-10-11 13:13:07,487 | INFO     | mean x: 1760171859.8355389
[2025-10-11 09:13:49] 2025-10-11 13:13:07,488 | INFO     | mean y: 2604677.379962193
[2025-10-11 09:13:49] 2025-10-11 13:13:07,488 | INFO     | -- intersect: -22910701175.0004
[2025-10-11 09:13:49] 2025-10-11 13:13:07,488 | INFO     | intersect: -22910701175.0004
[2025-10-11 09:13:49] 2025-10-11 13:13:07,489 | INFO     | chi2: 7.361671414970109
[2025-10-11 09:13:49] 2025-10-11 13:13:07,489 | INFO     | current chi2=7.361671414970109 (change=28.946220419149487 %)
[2025-10-11 09:13:49] 2025-10-11 13:13:07,490 | INFO     | sum of square deviations: 44611851829.53431
[2025-10-11 09:13:49] 2025-10-11 13:13:07,587 | INFO     | sum of deviations: 591039393307.1793
[2025-10-11 09:13:49] 2025-10-11 13:13:07,625 | INFO     | mean x: 1760171707.3396947
[2025-10-11 09:13:49] 2025-10-11 13:13:07,625 | INFO     | mean y: 2603910.2461832063
[2025-10-11 09:13:49] 2025-10-11 13:13:07,625 | INFO     | -- intersect: -23317002323.48982
[2025-10-11 09:13:49] 2025-10-11 13:13:07,625 | INFO     | intersect: -23317002323.48982
[2025-10-11 09:13:49] 2025-10-11 13:13:07,626 | INFO     | chi2: 7.3606123828155585
[2025-10-11 09:13:49] 2025-10-11 13:13:07,626 | INFO     | current chi2=7.3606123828155585 (change=0.014385756913805704 %)
[2025-10-11 09:13:49] 2025-10-11 13:13:07,626 | INFO     | right removable region: 523
[2025-10-11 09:13:49] 2025-10-11 13:13:07,627 | INFO     | sum of square deviations: 45900663071.34214
[2025-10-11 09:13:49] 2025-10-11 13:13:07,760 | INFO     | sum of deviations: 261768590778.11264
[2025-10-11 09:13:49] 2025-10-11 13:13:07,761 | INFO     | mean x: 1760172164.8393195
[2025-10-11 09:13:49] 2025-10-11 13:13:07,761 | INFO     | mean y: 2610129.6483931947
[2025-10-11 09:13:49] 2025-10-11 13:13:07,761 | INFO     | -- intersect: -10035540874.852463
[2025-10-11 09:13:49] 2025-10-11 13:13:07,762 | INFO     | intersect: -10035540874.852463
[2025-10-11 09:13:49] 2025-10-11 13:13:07,762 | INFO     | chi2: 6.053436751121072
[2025-10-11 09:13:49] 2025-10-11 13:13:07,763 | INFO     | current chi2=6.053436751121072 (change=41.57311072780027 %)
[2025-10-11 09:13:49] 2025-10-11 13:13:07,804 | INFO     | sum of square deviations: 44611085481.685036
[2025-10-11 09:13:49] 2025-10-11 13:13:07,909 | INFO     | sum of deviations: 135443744332.40225
[2025-10-11 09:13:49] 2025-10-11 13:13:07,959 | INFO     | mean x: 1760172317.3530533
[2025-10-11 09:13:49] 2025-10-11 13:13:07,959 | INFO     | mean y: 2625061.1545801526
[2025-10-11 09:13:49] 2025-10-11 13:13:07,959 | INFO     | -- intersect: -5341435204.548106
[2025-10-11 09:13:49] 2025-10-11 13:13:07,959 | INFO     | intersect: -5341435204.548106
[2025-10-11 09:13:49] 2025-10-11 13:13:07,960 | INFO     | chi2: 4.273720968631353
[2025-10-11 09:13:49] 2025-10-11 13:13:07,961 | INFO     | current chi2=4.273720968631353 (change=29.400088836479917 %)
[2025-10-11 09:13:49] 2025-10-11 13:13:07,962 | INFO     | sum of square deviations: 43345944741.287125
[2025-10-11 09:13:49] 2025-10-11 13:13:08,103 | INFO     | sum of deviations: 62477990886.94405
[2025-10-11 09:13:49] 2025-10-11 13:13:08,104 | INFO     | mean x: 1760172469.8631985
[2025-10-11 09:13:49] 2025-10-11 13:13:08,104 | INFO     | mean y: 2633856.154142582
[2025-10-11 09:13:49] 2025-10-11 13:13:08,104 | INFO     | -- intersect: -2534444068.619154
[2025-10-11 09:13:49] 2025-10-11 13:13:08,104 | INFO     | intersect: -2534444068.619154
[2025-10-11 09:13:49] 2025-10-11 13:13:08,145 | INFO     | chi2: 3.7132506911635215
[2025-10-11 09:13:49] 2025-10-11 13:13:08,145 | INFO     | current chi2=3.7132506911635215 (change=13.114339508396133 %)
[2025-10-11 09:13:49] 2025-10-11 13:13:08,145 | INFO     | left removable region: 30
[2025-10-11 09:13:49] 2025-10-11 13:13:08,146 | INFO     | sum of square deviations: 37151963340.92893
[2025-10-11 09:13:49] 2025-10-11 13:13:08,251 | INFO     | sum of deviations: 87547212928.34486
[2025-10-11 09:13:49] 2025-10-11 13:13:08,313 | INFO     | time since job start (32852s) is within the limit (172800.0s)
[2025-10-11 09:13:49] 2025-10-11 13:13:08,314 | INFO     | mean x: 1760172591.89858
[2025-10-11 09:13:49] 2025-10-11 13:13:08,314 | INFO     | mean y: 2666174.206896552
[2025-10-11 09:13:49] 2025-10-11 13:13:08,314 | INFO     | -- intersect: -4145114745.9959774
[2025-10-11 09:13:49] 2025-10-11 13:13:08,315 | INFO     | intersect: -4145114745.9959774
[2025-10-11 09:13:49] 2025-10-11 13:13:08,316 | INFO     | chi2: 0.023254948381850313
[2025-10-11 09:13:49] 2025-10-11 13:13:08,316 | INFO     | -- intersect: -4145114745.9959774
[2025-10-11 09:13:49] 2025-10-11 13:13:08,316 | INFO     | current memory leak: 2.36 B/s (using 493 data points, chi2=0.02)
[2025-10-11 09:13:49] 2025-10-11 13:13:08,341 | INFO     | could have reported an average CPU frequency of 2447 MHz (21 samples)
[2025-10-11 09:13:49] 2025-10-11 13:13:08,341 | INFO     | ..............................
[2025-10-11 09:13:49] 2025-10-11 13:13:08,341 | INFO     | . Timing measurements:
[2025-10-11 09:13:49] 2025-10-11 13:13:08,341 | INFO     | . get job = 1 s
[2025-10-11 09:13:49] 2025-10-11 13:13:08,342 | INFO     | . initial setup = 15 s
[2025-10-11 09:13:49] 2025-10-11 13:13:08,342 | INFO     | . payload setup = 69 s
[2025-10-11 09:13:49] 2025-10-11 13:13:08,342 | INFO     | . stage-in = 0 s
[2025-10-11 09:13:49] 2025-10-11 13:13:08,342 | INFO     | . payload execution = 32593 s
[2025-10-11 09:13:49] 2025-10-11 13:13:08,342 | INFO     | . stage-out = 13 s
[2025-10-11 09:13:49] 2025-10-11 13:13:08,342 | INFO     | . log creation = 4 s
[2025-10-11 09:13:49] 2025-10-11 13:13:08,342 | INFO     | ..............................
[2025-10-11 09:13:49] 2025-10-11 13:13:09,849 | INFO     | 
[2025-10-11 09:13:49] 2025-10-11 13:13:09,850 | INFO     | job summary report
[2025-10-11 09:13:49] 2025-10-11 13:13:09,850 | INFO     | --------------------------------------------------
[2025-10-11 09:13:49] 2025-10-11 13:13:09,850 | INFO     | PanDA job id: 6837730910
[2025-10-11 09:13:49] 2025-10-11 13:13:09,850 | INFO     | task id: 46676269
[2025-10-11 09:13:49] 2025-10-11 13:13:09,850 | INFO     | errors: (none)
[2025-10-11 09:13:49] 2025-10-11 13:13:09,850 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:13:49] 2025-10-11 13:13:09,850 | INFO     | pilot state: finished 
[2025-10-11 09:13:49] 2025-10-11 13:13:09,851 | INFO     | transexitcode: 0
[2025-10-11 09:13:49] 2025-10-11 13:13:09,851 | INFO     | exeerrorcode: 0
[2025-10-11 09:13:49] 2025-10-11 13:13:09,851 | INFO     | exeerrordiag: 
[2025-10-11 09:13:49] 2025-10-11 13:13:09,851 | INFO     | exitcode: 0
[2025-10-11 09:13:49] 2025-10-11 13:13:09,851 | INFO     | exitmsg: OK
[2025-10-11 09:13:49] 2025-10-11 13:13:09,851 | INFO     | cpuconsumptiontime: 67025 s
[2025-10-11 09:13:49] 2025-10-11 13:13:09,852 | INFO     | nevents: 400
[2025-10-11 09:13:49] 2025-10-11 13:13:09,852 | INFO     | neventsw: 0
[2025-10-11 09:13:49] 2025-10-11 13:13:09,852 | INFO     | pid: 1485884
[2025-10-11 09:13:49] 2025-10-11 13:13:09,852 | INFO     | pgrp: 1485884
[2025-10-11 09:13:49] 2025-10-11 13:13:09,852 | INFO     | corecount: 12
[2025-10-11 09:13:49] 2025-10-11 13:13:09,852 | INFO     | event service: False
[2025-10-11 09:13:49] 2025-10-11 13:13:09,852 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348742, 4: 2348969, 5: 2348969, 15: 2349153, 26: 2349181, 38: 2349209, 49: 2349237, 54: 2349527, 60: 2349835, 32670
[2025-10-11 09:13:49] 2025-10-11 13:13:09,853 | INFO     | --------------------------------------------------
[2025-10-11 09:13:49] 2025-10-11 13:13:09,853 | INFO     | 
[2025-10-11 09:13:49] 2025-10-11 13:13:09,931 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 09:13:49] 2025-10-11 13:13:10,244 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,245 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,245 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,245 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,247 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:13:49] 2025-10-11 13:13:10,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:13:49] 2025-10-11 13:13:10,287 | INFO     | job 6837730910 has completed (purged errors)
[2025-10-11 09:13:49] 2025-10-11 13:13:10,287 | INFO     | overall cleanup function is called
[2025-10-11 09:13:49] 2025-10-11 13:13:11,338 | INFO     | --- collectZombieJob: --- 10, [1485884]
[2025-10-11 09:13:49] 2025-10-11 13:13:11,338 | INFO     | zombie collector waiting for pid 1485884
[2025-10-11 09:13:49] 2025-10-11 13:13:11,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:13:49] 2025-10-11 13:13:11,339 | INFO     | collected zombie processes
[2025-10-11 09:13:49] 2025-10-11 13:13:11,339 | INFO     | will attempt to kill all subprocesses of pid=1485884
[2025-10-11 09:13:49] 2025-10-11 13:13:15,291 | INFO     | process IDs to be killed: [1485884] (in reverse order)
[2025-10-11 09:13:49] 2025-10-11 13:13:15,544 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:13:49] 2025-10-11 13:13:15,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:13:49] 2025-10-11 13:13:15,650 | INFO     | did not find any defunct processes belonging to 1485884
[2025-10-11 09:13:49] 2025-10-11 13:13:15,660 | INFO     | did not find any defunct processes belonging to 1485884
[2025-10-11 09:13:49] 2025-10-11 13:13:15,660 | INFO     | ready for new job
[2025-10-11 09:13:49] 2025-10-11 13:13:15,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:13:49] 2025-10-11 13:13:15,664 | INFO     | ***************************************
[2025-10-11 09:13:49] 2025-10-11 13:13:15,664 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:13:49] 2025-10-11 13:13:15,664 | INFO     | ***************************************
[2025-10-11 09:13:49] 2025-10-11 13:13:15,664 | INFO     | 
[2025-10-11 09:13:49] 2025-10-11 13:13:15,667 | INFO     | architecture information:
[2025-10-11 09:13:49] 2025-10-11 13:13:15,668 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:13:49] 2025-10-11 13:13:15,717 | INFO     | cat /etc/os-release:
[2025-10-11 09:13:49] NAME="CentOS Linux"
[2025-10-11 09:13:49] VERSION="7 (Core)"
[2025-10-11 09:13:49] ID="centos"
[2025-10-11 09:13:49] ID_LIKE="rhel fedora"
[2025-10-11 09:13:49] VERSION_ID="7"
[2025-10-11 09:13:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:13:49] ANSI_COLOR="0;31"
[2025-10-11 09:13:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:13:49] HOME_URL="https://www.centos.org/"
[2025-10-11 09:13:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:13:49] 
[2025-10-11 09:13:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:13:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:13:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:13:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:13:49] 
[2025-10-11 09:13:49] 2025-10-11 13:13:15,717 | INFO     | ***************************************
[2025-10-11 09:13:49] 2025-10-11 13:13:16,220 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 09:13:49] 2025-10-11 13:13:16,312 | INFO     | sufficient remaining disk space (63342379008 B)
[2025-10-11 09:13:49] 2025-10-11 13:13:16,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:13:49] 2025-10-11 13:13:16,313 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:13:49] 2025-10-11 13:13:16,313 | INFO     | update_server=False
[2025-10-11 09:13:49] 2025-10-11 13:13:16,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:13:49] 2025-10-11 13:13:16,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:13:49] 2025-10-11 13:13:16,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:13:49] 2025-10-11 13:13:16,473 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 09:13:49] 2025-10-11 13:13:16,474 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 09:13:49] 2025-10-11 13:13:16,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:13:49] 2025-10-11 13:13:16,474 | INFO     | will abort loop
[2025-10-11 09:13:49] 2025-10-11 13:13:17,192 | INFO     | all payload control threads have been joined
[2025-10-11 09:13:49] 2025-10-11 13:13:17,255 | INFO     | all data control threads have been joined
[2025-10-11 09:13:49] 2025-10-11 13:13:17,319 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:17,320 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:17,326 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:17,480 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:17,527 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:17,729 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:17,766 | INFO     | all job control threads have been joined
[2025-10-11 09:13:49] 2025-10-11 13:13:18,234 | INFO     | [payload] control thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:18,261 | INFO     | [data] control thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:18,341 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:18,658 | INFO     | [job] validate thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:18,668 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:18,676 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:18,685 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:18,771 | INFO     | [job] control thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:19,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:13:49] 2025-10-11 13:13:20,053 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:20,328 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:13:49] 2025-10-11 13:13:35,320 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:13:49] 2025-10-11 13:13:36,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464600426304)>', '<ExcThread(monitor, started 140464237811456)>']
[2025-10-11 09:13:49] 2025-10-11 13:13:41,370 | INFO     | all workflow threads have been joined
[2025-10-11 09:13:49] 2025-10-11 13:13:41,370 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:13:49] 2025-10-11 13:13:41,371 | INFO     | traces error code: 0
[2025-10-11 09:13:49] 2025-10-11 13:13:41,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:13:49] 2025-10-11 13:13:46,555 | INFO     | PID=1466530 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:13:49] 2025-10-11 13:13:46,556 | INFO     | .. there are 9 such processes running
[2025-10-11 09:13:49] 2025-10-11 13:13:46,557 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:13:49] 2025-10-11 13:13:46,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:13:49] 2025-10-11 13:13:46,560 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:13:49] 2025-10-11 13:13:46,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:13:49] 2025-10-11 13:13:46,560 | INFO     | [monitor] control thread has ended
[2025-10-11 09:13:49] 2025-10-11 13:13:47,338 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:13:49] 2025-10-11 13:13:47,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:13:49] 2025-10-11 13:13:47,861 [wrapper] pilotpid: 1466530
[2025-10-11 09:13:49] 2025-10-11 13:13:47,963 [wrapper] Pilot exit status: 0
[2025-10-11 09:13:49] 2025-10-11 13:13:48,058 [wrapper] pandaids: 6837730910
[2025-10-11 09:13:49] 2025-10-11 13:13:48,355 [wrapper] cleanup supervisor_pilot 2275970 1466531
[2025-10-11 09:13:49] 2025-10-11 13:13:48,361 [wrapper] Test setup, not cleaning
[2025-10-11 09:13:49] 2025-10-11 13:13:48,366 [wrapper] apfmon messages muted
[2025-10-11 09:13:49] 2025-10-11 13:13:48,371 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:13:49] 2025-10-11 13:13:48,376 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:13:49]  *** Error codes and diagnostics ***
[2025-10-11 09:13:49]     "exeErrorCode": 0,
[2025-10-11 09:13:49]     "exeErrorDiag": "",
[2025-10-11 09:13:49]     "pilotErrorCode": 0,
[2025-10-11 09:13:49]     "pilotErrorDiag": "",
[2025-10-11 09:13:49]  *** Listing of results directory ***
[2025-10-11 09:13:49] total 421896
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 15:27 pilot3.tar.gz
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 15:33 queuedata.json
[2025-10-11 09:13:49] -rwx------. 1 boincer umatlas     36292 Oct 10 15:33 runpilot2-wrapper.sh
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:13:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:03 run_atlas
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:03 job.xml
[2025-10-11 09:13:49] -rw-r--r--. 2 boincer umatlas 219822963 Oct 11 00:03 EVNT.46676267._001784.pool.root.1
[2025-10-11 09:13:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:03 start_atlas.sh
[2025-10-11 09:13:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:03 shared
[2025-10-11 09:13:49] -rw-r--r--. 2 boincer umatlas    569685 Oct 11 00:03 input.tar.gz
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:03 boinc_lockfile
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:03 pandaJob.out
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas    975509 Oct 11 00:05 agis_schedconf.cvmfs.json
[2025-10-11 09:13:49] drwx------. 5 boincer umatlas      4096 Oct 11 00:05 pilot3
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas 198593473 Oct 11 09:07 HITS.46676269._044081.pool.root.1
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas       531 Oct 11 09:08 boinc_task_state.xml
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas      6613 Oct 11 09:11 init_data.xml
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas      1053 Oct 11 09:11 memory_monitor_summary.json
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas   1560580 Oct 11 09:11 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas    758143 Oct 11 09:12 log.46676269._044081.job.log.tgz.1
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas      7853 Oct 11 09:13 heartbeat.json
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas        95 Oct 11 09:13 pilot_heartbeat.json
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas       822 Oct 11 09:13 pilotlog.txt
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas   4092654 Oct 11 09:13 log.46676269._044081.job.log.1
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas        28 Oct 11 09:13 wrapper_checkpoint.txt
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 09:13 boinc_mmap_file
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas       357 Oct 11 09:13 output.list
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas       620 Oct 11 09:13 runtime_log
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas   4874240 Oct 11 09:13 result.tar.gz
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas       661 Oct 11 09:13 vF7KDmG3XR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmoTQMDmdznlBo.diag
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas      8701 Oct 11 09:13 runtime_log.err
[2025-10-11 09:13:49] -rw-r--r--. 1 boincer umatlas     21119 Oct 11 09:13 stderr.txt
[2025-10-11 09:13:49] HITS file was successfully produced:
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas 198593473 Oct 11 09:07 shared/HITS.pool.root.1
[2025-10-11 09:13:49]  *** Contents of shared directory: ***
[2025-10-11 09:13:49] total 413952
[2025-10-11 09:13:49] -rw-r--r--. 2 boincer umatlas 219822963 Oct 11 00:03 ATLAS.root_0
[2025-10-11 09:13:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:03 start_atlas.sh
[2025-10-11 09:13:49] -rw-r--r--. 2 boincer umatlas    569685 Oct 11 00:03 input.tar.gz
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas 198593473 Oct 11 09:07 HITS.pool.root.1
[2025-10-11 09:13:49] -rw-------. 1 boincer umatlas   4874240 Oct 11 09:13 result.tar.gz
09:13:51 (1459551): run_atlas exited; CPU time 68036.968136
09:13:51 (1459551): called boinc_finish(0)

</stderr_txt>
]]>

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