Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:40:46 (4055): wrapper (7.7.26015): starting
02:40:46 (4055): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 02:40:46] Arguments: --nthreads 4
[2025-10-11 02:40:46] Threads: 4
[2025-10-11 02:40:46] Checking for CVMFS
[2025-10-11 02:40:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 02:41:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 02:41:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 02:41:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 02:41:05] 2.11.5.0 4266 0 25236 151567 3 1 2272724 4096000 0 130560 0 0 0.000 1291 417 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-11 02:41:05] CVMFS is ok
[2025-10-11 02:41:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 02:41:05] Checking for apptainer binary...
[2025-10-11 02:41:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 02:41:05] Running /usr/bin/apptainer --version
[2025-10-11 02:41:06] apptainer version 1.0.3
[2025-10-11 02:41:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 02:41:07] TeeC28
[2025-10-11 02:41:07] apptainer works
[2025-10-11 02:41:07] Set ATHENA_PROC_NUMBER=4
[2025-10-11 02:41:07] Set ATHENA_CORE_NUMBER=4
[2025-10-11 02:41:07] Starting ATLAS job with PandaID=6837731541
[2025-10-11 02:41:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/users/jmp/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 05:36:02]  *** The last 200 lines of the pilot log: ***
[2025-10-11 05:36:02] 2025-10-11 04:34:59,970 | INFO     | time since job start (10399s) is within the limit (172800.0s)
[2025-10-11 05:36:02] 2025-10-11 04:35:00,137 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 05:36:02] 2025-10-11 04:35:00,138 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3200.02625
[2025-10-11 05:36:02] 2025-10-11 04:35:00,139 | INFO     | using path: /home/m/users/jmp/BOINC/slots/0/PanDA_Pilot-6837731541/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 05:36:02] 2025-10-11 04:35:00,140 | INFO     | extracted standard info from prmon json
[2025-10-11 05:36:02] 2025-10-11 04:35:00,140 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 05:36:02] 2025-10-11 04:35:00,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 05:36:02] 2025-10-11 04:35:00,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:36:02] 2025-10-11 04:35:00,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:36:02] 2025-10-11 04:35:00,144 | INFO     | fitting pss+swap vs Time
[2025-10-11 05:36:02] 2025-10-11 04:35:00,144 | INFO     | sum of square deviations: 1367709365.0
[2025-10-11 05:36:02] 2025-10-11 04:35:00,145 | INFO     | sum of deviations: -12784817553.000006
[2025-10-11 05:36:02] 2025-10-11 04:35:00,145 | INFO     | mean x: 1760151894.5
[2025-10-11 05:36:02] 2025-10-11 04:35:00,146 | INFO     | mean y: 2381069.06097561
[2025-10-11 05:36:02] 2025-10-11 04:35:00,146 | INFO     | -- intersect: 16455599430.07572
[2025-10-11 05:36:02] 2025-10-11 04:35:00,146 | INFO     | intersect: 16455599430.07572
[2025-10-11 05:36:02] 2025-10-11 04:35:00,146 | INFO     | chi2: 1.7724805736889153
[2025-10-11 05:36:02] 2025-10-11 04:35:00,146 | INFO     | sum of square deviations: 1246386160.0
[2025-10-11 05:36:02] 2025-10-11 04:35:00,148 | INFO     | sum of deviations: -12088758508.999998
[2025-10-11 05:36:02] 2025-10-11 04:35:00,148 | INFO     | mean x: 1760151742.0
[2025-10-11 05:36:02] 2025-10-11 04:35:00,148 | INFO     | mean y: 2381944.182389937
[2025-10-11 05:36:02] 2025-10-11 04:35:00,148 | INFO     | -- intersect: 17074177212.058014
[2025-10-11 05:36:02] 2025-10-11 04:35:00,148 | INFO     | intersect: 17074177212.058014
[2025-10-11 05:36:02] 2025-10-11 04:35:00,148 | INFO     | chi2: 1.7706590888977933
[2025-10-11 05:36:02] 2025-10-11 04:35:00,149 | INFO     | current chi2=1.7706590888977933 (change=0.10276472521958771 %)
[2025-10-11 05:36:02] 2025-10-11 04:35:00,149 | INFO     | right removable region: 158
[2025-10-11 05:36:02] 2025-10-11 04:35:00,149 | INFO     | sum of square deviations: 1246386160.0
[2025-10-11 05:36:02] 2025-10-11 04:35:00,150 | INFO     | sum of deviations: -33592765513.999996
[2025-10-11 05:36:02] 2025-10-11 04:35:00,150 | INFO     | mean x: 1760152047.0
[2025-10-11 05:36:02] 2025-10-11 04:35:00,150 | INFO     | mean y: 2406758.176100629
[2025-10-11 05:36:02] 2025-10-11 04:35:00,151 | INFO     | -- intersect: 47442258773.10709
[2025-10-11 05:36:02] 2025-10-11 04:35:00,151 | INFO     | intersect: 47442258773.10709
[2025-10-11 05:36:02] 2025-10-11 04:35:00,151 | INFO     | chi2: 0.33950186158077733
[2025-10-11 05:36:02] 2025-10-11 04:35:00,151 | INFO     | current chi2=0.33950186158077733 (change=80.84594739031749 %)
[2025-10-11 05:36:02] 2025-10-11 04:35:00,151 | INFO     | sum of square deviations: 1132458442.5
[2025-10-11 05:36:02] 2025-10-11 04:35:00,153 | INFO     | sum of deviations: -27213124037.5
[2025-10-11 05:36:02] 2025-10-11 04:35:00,153 | INFO     | mean x: 1760152199.5
[2025-10-11 05:36:02] 2025-10-11 04:35:00,153 | INFO     | mean y: 2398178.448051948
[2025-10-11 05:36:02] 2025-10-11 04:35:00,153 | INFO     | -- intersect: 42299085043.29249
[2025-10-11 05:36:02] 2025-10-11 04:35:00,153 | INFO     | intersect: 42299085043.29249
[2025-10-11 05:36:02] 2025-10-11 04:35:00,153 | INFO     | chi2: 0.3202740806442099
[2025-10-11 05:36:02] 2025-10-11 04:35:00,153 | INFO     | current chi2=0.3202740806442099 (change=5.663527394824774 %)
[2025-10-11 05:36:02] 2025-10-11 04:35:00,153 | INFO     | left removable region: 20
[2025-10-11 05:36:02] 2025-10-11 04:35:00,154 | INFO     | sum of square deviations: 814878534.5
[2025-10-11 05:36:02] 2025-10-11 04:35:00,155 | INFO     | sum of deviations: -9520196586.5
[2025-10-11 05:36:02] 2025-10-11 04:35:00,155 | INFO     | mean x: 1760152321.5
[2025-10-11 05:36:02] 2025-10-11 04:35:00,155 | INFO     | mean y: 2373606.731884058
[2025-10-11 05:36:02] 2025-10-11 04:35:00,155 | INFO     | -- intersect: 20566169821.030556
[2025-10-11 05:36:02] 2025-10-11 04:35:00,155 | INFO     | intersect: 20566169821.030556
[2025-10-11 05:36:02] 2025-10-11 04:35:00,155 | INFO     | chi2: 0.1826610000369204
[2025-10-11 05:36:02] 2025-10-11 04:35:00,156 | INFO     | -- intersect: 20566169821.030556
[2025-10-11 05:36:02] 2025-10-11 04:35:00,156 | INFO     | current memory leak: -11.68 B/s (using 138 data points, chi2=0.18)
[2025-10-11 05:36:02] 2025-10-11 04:35:00,156 | INFO     | could have reported an average CPU frequency of 3200 MHz (9 samples)
[2025-10-11 05:36:02] 2025-10-11 04:35:00,156 | INFO     | ..............................
[2025-10-11 05:36:02] 2025-10-11 04:35:00,156 | INFO     | . Timing measurements:
[2025-10-11 05:36:02] 2025-10-11 04:35:00,156 | INFO     | . get job = 0 s
[2025-10-11 05:36:02] 2025-10-11 04:35:00,156 | INFO     | . initial setup = 10 s
[2025-10-11 05:36:02] 2025-10-11 04:35:00,156 | INFO     | . payload setup = 6 s
[2025-10-11 05:36:02] 2025-10-11 04:35:00,156 | INFO     | . stage-in = 0 s
[2025-10-11 05:36:02] 2025-10-11 04:35:00,156 | INFO     | . payload execution = 9988 s
[2025-10-11 05:36:02] 2025-10-11 04:35:00,157 | INFO     | . stage-out = 0 s
[2025-10-11 05:36:02] 2025-10-11 04:35:00,157 | INFO     | . log creation = 0 s
[2025-10-11 05:36:02] 2025-10-11 04:35:00,157 | INFO     | ..............................
[2025-10-11 05:36:02] 2025-10-11 04:35:00,258 | INFO     | 
[2025-10-11 05:36:02] 2025-10-11 04:35:00,258 | INFO     | job summary report
[2025-10-11 05:36:02] 2025-10-11 04:35:00,258 | INFO     | --------------------------------------------------
[2025-10-11 05:36:02] 2025-10-11 04:35:00,258 | INFO     | PanDA job id: 6837731541
[2025-10-11 05:36:02] 2025-10-11 04:35:00,258 | INFO     | task id: 46676269
[2025-10-11 05:36:02] 2025-10-11 04:35:00,258 | INFO     | errors: (none)
[2025-10-11 05:36:02] 2025-10-11 04:35:00,258 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 05:36:02] 2025-10-11 04:35:00,258 | INFO     | pilot state: finished 
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | transexitcode: 0
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | exeerrorcode: 0
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | exeerrordiag: 
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | exitcode: 0
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | exitmsg: OK
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | cpuconsumptiontime: 37990 s
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | nevents: 400
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | neventsw: 0
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | pid: 14690
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | pgrp: 14690
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | corecount: 4
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | event service: False
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | sizes: {0: 2348866, 2: 2349128, 11: 2349156, 9994: 2377752, 9995: 2386823, 9997: 2386823, 10386: 2387209}
[2025-10-11 05:36:02] 2025-10-11 04:35:00,259 | INFO     | --------------------------------------------------
[2025-10-11 05:36:02] 2025-10-11 04:35:00,260 | INFO     | 
[2025-10-11 05:36:02] 2025-10-11 04:35:00,260 | INFO     | executing command: ls -lF /home/m/users/jmp/BOINC/slots/0
[2025-10-11 05:36:02] 2025-10-11 04:35:00,267 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,269 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 05:36:02] 2025-10-11 04:35:00,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,269 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 05:36:02] 2025-10-11 04:35:00,269 | INFO     | job 6837731541 has completed (purged errors)
[2025-10-11 05:36:02] 2025-10-11 04:35:00,269 | INFO     | overall cleanup function is called
[2025-10-11 05:36:02] 2025-10-11 04:35:01,276 | INFO     | --- collectZombieJob: --- 10, [14690]
[2025-10-11 05:36:02] 2025-10-11 04:35:01,276 | INFO     | zombie collector waiting for pid 14690
[2025-10-11 05:36:02] 2025-10-11 04:35:01,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 05:36:02] 2025-10-11 04:35:01,277 | INFO     | collected zombie processes
[2025-10-11 05:36:02] 2025-10-11 04:35:01,278 | INFO     | will attempt to kill all subprocesses of pid=14690
[2025-10-11 05:36:02] 2025-10-11 04:35:01,351 | INFO     | process IDs to be killed: [14690] (in reverse order)
[2025-10-11 05:36:02] 2025-10-11 04:35:01,373 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 05:36:02] 2025-10-11 04:35:01,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 05:36:02] 2025-10-11 04:35:01,375 | INFO     | did not find any defunct processes belonging to 14690
[2025-10-11 05:36:02] 2025-10-11 04:35:01,377 | INFO     | did not find any defunct processes belonging to 14690
[2025-10-11 05:36:02] 2025-10-11 04:35:01,377 | INFO     | ready for new job
[2025-10-11 05:36:02] 2025-10-11 04:35:01,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 05:36:02] 2025-10-11 04:35:01,378 | INFO     | ***************************************
[2025-10-11 05:36:02] 2025-10-11 04:35:01,379 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 05:36:02] 2025-10-11 04:35:01,379 | INFO     | ***************************************
[2025-10-11 05:36:02] 2025-10-11 04:35:01,379 | INFO     | 
[2025-10-11 05:36:02] 2025-10-11 04:35:01,396 | INFO     | architecture information:
[2025-10-11 05:36:02] 2025-10-11 04:35:01,397 | INFO     | executing command: cat /etc/os-release
[2025-10-11 05:36:02] 2025-10-11 04:35:01,403 | INFO     | cat /etc/os-release:
[2025-10-11 05:36:02] NAME="CentOS Linux"
[2025-10-11 05:36:02] VERSION="7 (Core)"
[2025-10-11 05:36:02] ID="centos"
[2025-10-11 05:36:02] ID_LIKE="rhel fedora"
[2025-10-11 05:36:02] VERSION_ID="7"
[2025-10-11 05:36:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 05:36:02] ANSI_COLOR="0;31"
[2025-10-11 05:36:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 05:36:02] HOME_URL="https://www.centos.org/"
[2025-10-11 05:36:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 05:36:02] 
[2025-10-11 05:36:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 05:36:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 05:36:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 05:36:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 05:36:02] 
[2025-10-11 05:36:02] 2025-10-11 04:35:01,404 | INFO     | ***************************************
[2025-10-11 05:36:02] 2025-10-11 04:35:01,907 | INFO     | executing command: df -mP /home/m/users/jmp/BOINC/slots/0
[2025-10-11 05:36:02] 2025-10-11 04:35:01,919 | INFO     | sufficient remaining disk space (414749556736 B)
[2025-10-11 05:36:02] 2025-10-11 04:35:01,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 05:36:02] 2025-10-11 04:35:01,920 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 05:36:02] 2025-10-11 04:35:01,920 | INFO     | update_server=False
[2025-10-11 05:36:02] 2025-10-11 04:35:01,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 05:36:02] 2025-10-11 04:35:01,921 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 05:36:02] 2025-10-11 04:35:01,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:36:02] 2025-10-11 04:35:01,921 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 05:36:02] 2025-10-11 04:35:01,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 05:36:02] 2025-10-11 04:35:01,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 05:36:02] 2025-10-11 04:35:01,990 | INFO     | all data control threads have been joined
[2025-10-11 05:36:02] 2025-10-11 04:35:02,084 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 05:36:02] 2025-10-11 04:35:02,085 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 05:36:02] 2025-10-11 04:35:02,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:36:02] 2025-10-11 04:35:02,086 | INFO     | will abort loop
[2025-10-11 05:36:02] 2025-10-11 04:35:02,687 | INFO     | all payload control threads have been joined
[2025-10-11 05:36:02] 2025-10-11 04:35:02,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 05:36:02] 2025-10-11 04:35:02,791 | INFO     | all job control threads have been joined
[2025-10-11 05:36:02] 2025-10-11 04:35:02,926 | INFO     | [job] retrieve thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:02,928 | INFO     | [job] queue monitor thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:02,939 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:02,996 | INFO     | [data] control thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:03,064 | INFO     | [payload] failed_post thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:03,088 | INFO     | [job] job monitor thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:03,089 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:03,245 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:03,693 | INFO     | [payload] control thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:03,797 | INFO     | [job] control thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:03,875 | INFO     | [data] copytool_in thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:03,906 | INFO     | [payload] validate_post thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:04,135 | INFO     | [job] validate thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:04,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 05:36:02] 2025-10-11 04:35:04,755 | INFO     | [data] copytool_out thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:08,560 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:12,516 | INFO     | job.realtimelogging is not enabled
[2025-10-11 05:36:02] 2025-10-11 04:35:13,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 05:36:02] 2025-10-11 04:35:56,636 | INFO     | [monitor] cgroup control has ended
[2025-10-11 05:36:02] 2025-10-11 04:35:57,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140682200364864)>', '<ExcThread(monitor, started 140681754425088)>']
[2025-10-11 05:36:02] 2025-10-11 04:35:58,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 05:36:02] 2025-10-11 04:35:58,214 | INFO     | [monitor] control thread has ended
[2025-10-11 05:36:02] 2025-10-11 04:36:02,450 | INFO     | all workflow threads have been joined
[2025-10-11 05:36:02] 2025-10-11 04:36:02,451 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 05:36:02] 2025-10-11 04:36:02,452 | INFO     | traces error code: 0
[2025-10-11 05:36:02] 2025-10-11 04:36:02,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 05:36:02] 2025-10-11 04:36:02,562 [wrapper] ==== pilot stdout END ====
[2025-10-11 05:36:02] 2025-10-11 04:36:02,564 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 05:36:02] 2025-10-11 04:36:02,566 [wrapper] pilotpid: 8320
[2025-10-11 05:36:02] 2025-10-11 04:36:02,568 [wrapper] Pilot exit status: 0
[2025-10-11 05:36:02] 2025-10-11 04:36:02,582 [wrapper] pandaids: 6837731541
[2025-10-11 05:36:02] 2025-10-11 04:36:02,598 [wrapper] cleanup supervisor_pilot  1459 8321
[2025-10-11 05:36:02] 2025-10-11 04:36:02,600 [wrapper] Test setup, not cleaning
[2025-10-11 05:36:02] 2025-10-11 04:36:02,602 [wrapper] apfmon messages muted
[2025-10-11 05:36:02] 2025-10-11 04:36:02,604 [wrapper] ==== wrapper stdout END ====
[2025-10-11 05:36:02] 2025-10-11 04:36:02,605 [wrapper] ==== wrapper stderr END ====
[2025-10-11 05:36:02]  *** Error codes and diagnostics ***
[2025-10-11 05:36:02]     "exeErrorCode": 0,
[2025-10-11 05:36:02]     "exeErrorDiag": "",
[2025-10-11 05:36:02]     "pilotErrorCode": 0,
[2025-10-11 05:36:02]     "pilotErrorDiag": "",
[2025-10-11 05:36:02]  *** Listing of results directory ***
[2025-10-11 05:36:02] total 414904
[2025-10-11 05:36:02] -rw-r--r-- 1 m m    557409 Oct 10 20:36 pilot3.tar.gz
[2025-10-11 05:36:02] -rwx------ 1 m m     36292 Oct 10 20:45 runpilot2-wrapper.sh
[2025-10-11 05:36:02] -rw-r--r-- 1 m m      5112 Oct 10 20:45 queuedata.json
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m       100 Oct 11 02:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 05:36:02] -rwxr-xr-x 1 m m      7986 Oct 11 02:40 run_atlas
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m       105 Oct 11 02:40 job.xml
[2025-10-11 05:36:02] -rw-r--r-- 2 m m     15120 Oct 11 02:40 start_atlas.sh
[2025-10-11 05:36:02] drwxrwx--x 2 m m      4096 Oct 11 02:40 shared
[2025-10-11 05:36:02] -rw-r--r-- 2 m m    569679 Oct 11 02:40 input.tar.gz
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m      6041 Oct 11 02:40 init_data.xml
[2025-10-11 05:36:02] -rw-r--r-- 2 m m 221447531 Oct 11 02:40 EVNT.46676267._001789.pool.root.1
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m         0 Oct 11 02:40 boinc_lockfile
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m      2550 Oct 11 02:41 pandaJob.out
[2025-10-11 05:36:02] -rw------- 1 m m    975517 Oct 11 02:41 agis_schedconf.cvmfs.json
[2025-10-11 05:36:02] -rw------- 1 m m   1560580 Oct 11 02:41 agis_ddmendpoints.agis.ALL.json
[2025-10-11 05:36:02] drwx------ 5 m m      4096 Oct 11 02:41 pilot3
[2025-10-11 05:36:02] -rw------- 1 m m 195839227 Oct 11 05:28 HITS.46676269._044216.pool.root.1
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m       530 Oct 11 05:28 boinc_task_state.xml
[2025-10-11 05:36:02] -rw------- 1 m m      1030 Oct 11 05:28 memory_monitor_summary.json
[2025-10-11 05:36:02] -rw------- 1 m m    351924 Oct 11 05:28 log.46676269._044216.job.log.tgz.1
[2025-10-11 05:36:02] -rw------- 1 m m        95 Oct 11 05:34 pilot_heartbeat.json
[2025-10-11 05:36:02] -rw------- 1 m m      7787 Oct 11 05:35 heartbeat.json
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m        28 Oct 11 05:35 wrapper_checkpoint.txt
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m      8192 Oct 11 05:35 boinc_mmap_file
[2025-10-11 05:36:02] -rw------- 1 m m      4820 Oct 11 05:36 pilotlog.txt
[2025-10-11 05:36:02] -rw------- 1 m m   1481430 Oct 11 05:36 log.46676269._044216.job.log.1
[2025-10-11 05:36:02] -rw------- 1 m m       357 Oct 11 05:36 output.list
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m       620 Oct 11 05:36 runtime_log
[2025-10-11 05:36:02] -rw------- 1 m m   1853440 Oct 11 05:36 result.tar.gz
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m      8758 Oct 11 05:36 runtime_log.err
[2025-10-11 05:36:02] -rw------- 1 m m       645 Oct 11 05:36 paCLDmMEYR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNIeNDm6GGjUo.diag
[2025-10-11 05:36:02] -rw-rw-r-- 1 m m     20663 Oct 11 05:36 stderr.txt
[2025-10-11 05:36:02] HITS file was successfully produced:
[2025-10-11 05:36:02] -rw------- 1 m m 195839227 Oct 11 05:28 shared/HITS.pool.root.1
[2025-10-11 05:36:02]  *** Contents of shared directory: ***
[2025-10-11 05:36:02] total 409908
[2025-10-11 05:36:02] -rw-r--r-- 2 m m     15120 Oct 11 02:40 start_atlas.sh
[2025-10-11 05:36:02] -rw-r--r-- 2 m m    569679 Oct 11 02:40 input.tar.gz
[2025-10-11 05:36:02] -rw-r--r-- 2 m m 221447531 Oct 11 02:40 ATLAS.root_0
[2025-10-11 05:36:02] -rw------- 1 m m 195839227 Oct 11 05:28 HITS.pool.root.1
[2025-10-11 05:36:02] -rw------- 1 m m   1853440 Oct 11 05:36 result.tar.gz
05:36:03 (4055): run_atlas exited; CPU time 38092.434232
05:36:03 (4055): called boinc_finish(0)

</stderr_txt>
]]>

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