Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:38:31 (2766175): wrapper (7.7.26015): starting
22:38:31 (2766175): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 22:38:31] Arguments: --nthreads 8
[2025-10-10 22:38:31] Threads: 8
[2025-10-10 22:38:31] Checking for CVMFS
[2025-10-10 22:38:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 22:38:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 22:38:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 22:38:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 22:38:34] 2.13.2.0 169449 122975 506524 151569 2 154 20306297 32935936 41595 16776704 0 245130898 99.577 263842085 21043 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 22:38:34] CVMFS is ok
[2025-10-10 22:38:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 22:38:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 22:38:34] Further information can be found at the LHC@home message board.
[2025-10-10 22:38:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 22:38:34] Checking for apptainer binary...
[2025-10-10 22:38:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 22:38:34] Running /usr/bin/apptainer --version
[2025-10-10 22:38:34] apptainer version 1.4.3-1.el9
[2025-10-10 22:38:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 22:38:35] c6-12-27-4.aglt2.org
[2025-10-10 22:38:35] apptainer works
[2025-10-10 22:38:35] Set ATHENA_PROC_NUMBER=8
[2025-10-10 22:38:35] Set ATHENA_CORE_NUMBER=8
[2025-10-10 22:38:35] Starting ATLAS job with PandaID=6837668374
[2025-10-10 22:38:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 04:47:49]  *** The last 200 lines of the pilot log: ***
[2025-10-11 04:47:50] 2025-10-11 08:46:53,623 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6837668374/HITS.46676269._041217.pool.root.1 since it does not exist
[2025-10-11 04:47:50] 2025-10-11 08:46:53,626 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837668374/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 04:47:50] 2025-10-11 08:46:53,627 | INFO     | extracted standard info from prmon json
[2025-10-11 04:47:50] 2025-10-11 08:46:53,627 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 04:47:50] 2025-10-11 08:46:53,627 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 04:47:50] 2025-10-11 08:46:53,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 04:47:50] 2025-10-11 08:46:53,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 04:47:50] 2025-10-11 08:46:53,643 | INFO     | fitting pss+swap vs Time
[2025-10-11 04:47:50] 2025-10-11 08:46:53,643 | INFO     | sum of square deviations: 14109507123.333302
[2025-10-11 04:47:50] 2025-10-11 08:46:53,666 | INFO     | sum of deviations: 30441433066.999992
[2025-10-11 04:47:50] 2025-10-11 08:46:53,667 | INFO     | mean x: 1760161445.6666667
[2025-10-11 04:47:50] 2025-10-11 08:46:53,667 | INFO     | mean y: 2167698.9663865548
[2025-10-11 04:47:50] 2025-10-11 08:46:53,667 | INFO     | -- intersect: -3795402008.253644
[2025-10-11 04:47:50] 2025-10-11 08:46:53,667 | INFO     | intersect: -3795402008.253644
[2025-10-11 04:47:50] 2025-10-11 08:46:53,667 | INFO     | chi2: 4.927301688028926
[2025-10-11 04:47:50] 2025-10-11 08:46:53,668 | INFO     | sum of square deviations: 13525047821.079588
[2025-10-11 04:47:50] 2025-10-11 08:46:53,683 | INFO     | sum of deviations: 50963037697.00001
[2025-10-11 04:47:50] 2025-10-11 08:46:53,684 | INFO     | mean x: 1760161293.1761363
[2025-10-11 04:47:50] 2025-10-11 08:46:53,684 | INFO     | mean y: 2172997.5
[2025-10-11 04:47:50] 2025-10-11 08:46:53,684 | INFO     | -- intersect: -6630200323.733513
[2025-10-11 04:47:50] 2025-10-11 08:46:53,684 | INFO     | intersect: -6630200323.733513
[2025-10-11 04:47:50] 2025-10-11 08:46:53,697 | INFO     | chi2: 4.3002512999786555
[2025-10-11 04:47:50] 2025-10-11 08:46:53,697 | INFO     | current chi2=4.3002512999786555 (change=12.726040087492802 %)
[2025-10-11 04:47:50] 2025-10-11 08:46:53,697 | INFO     | right removable region: 351
[2025-10-11 04:47:50] 2025-10-11 08:46:53,697 | INFO     | sum of square deviations: 13524924174.428965
[2025-10-11 04:47:50] 2025-10-11 08:46:53,709 | INFO     | sum of deviations: -58294072461.10516
[2025-10-11 04:47:50] 2025-10-11 08:46:53,709 | INFO     | mean x: 1760161598.1732955
[2025-10-11 04:47:50] 2025-10-11 08:46:53,709 | INFO     | mean y: 2190811.116477273
[2025-10-11 04:47:50] 2025-10-11 08:46:53,709 | INFO     | -- intersect: 7588701938.562477
[2025-10-11 04:47:50] 2025-10-11 08:46:53,709 | INFO     | intersect: 7588701938.562477
[2025-10-11 04:47:50] 2025-10-11 08:46:53,710 | INFO     | chi2: 1.7822125016516495
[2025-10-11 04:47:50] 2025-10-11 08:46:53,710 | INFO     | current chi2=1.7822125016516495 (change=63.82984817062034 %)
[2025-10-11 04:47:50] 2025-10-11 08:46:53,711 | INFO     | sum of square deviations: 12956735219.850136
[2025-10-11 04:47:50] 2025-10-11 08:46:53,726 | INFO     | sum of deviations: -89421485460.05196
[2025-10-11 04:47:50] 2025-10-11 08:46:53,726 | INFO     | mean x: 1760161750.6772335
[2025-10-11 04:47:50] 2025-10-11 08:46:53,726 | INFO     | mean y: 2199149.1959654177
[2025-10-11 04:47:50] 2025-10-11 08:46:53,727 | INFO     | -- intersect: 12150033902.690632
[2025-10-11 04:47:50] 2025-10-11 08:46:53,727 | INFO     | intersect: 12150033902.690632
[2025-10-11 04:47:50] 2025-10-11 08:46:53,727 | INFO     | chi2: 1.341420065190642
[2025-10-11 04:47:50] 2025-10-11 08:46:53,727 | INFO     | current chi2=1.341420065190642 (change=24.732877591898102 %)
[2025-10-11 04:47:50] 2025-10-11 08:46:53,727 | INFO     | left removable region: 20
[2025-10-11 04:47:50] 2025-10-11 08:46:53,728 | INFO     | sum of square deviations: 11245901885.389835
[2025-10-11 04:47:50] 2025-10-11 08:46:53,739 | INFO     | sum of deviations: -41365056916.19643
[2025-10-11 04:47:50] 2025-10-11 08:46:53,739 | INFO     | mean x: 1760161872.7009063
[2025-10-11 04:47:50] 2025-10-11 08:46:53,739 | INFO     | mean y: 2197863.987915408
[2025-10-11 04:47:50] 2025-10-11 08:46:53,739 | INFO     | -- intersect: 6476484834.300387
[2025-10-11 04:47:50] 2025-10-11 08:46:53,739 | INFO     | intersect: 6476484834.300387
[2025-10-11 04:47:50] 2025-10-11 08:46:53,740 | INFO     | chi2: 0.5536563154717216
[2025-10-11 04:47:50] 2025-10-11 08:46:53,740 | INFO     | -- intersect: 6476484834.300387
[2025-10-11 04:47:50] 2025-10-11 08:46:53,740 | INFO     | current memory leak: -3.68 B/s (using 331 data points, chi2=0.55)
[2025-10-11 04:47:50] 2025-10-11 08:46:53,761 | INFO     | could have reported an average CPU frequency of 2587 MHz (15 samples)
[2025-10-11 04:47:50] 2025-10-11 08:46:53,761 | INFO     | ..............................
[2025-10-11 04:47:50] 2025-10-11 08:46:53,762 | INFO     | . Timing measurements:
[2025-10-11 04:47:50] 2025-10-11 08:46:53,762 | INFO     | . get job = 0 s
[2025-10-11 04:47:50] 2025-10-11 08:46:53,762 | INFO     | . initial setup = 7 s
[2025-10-11 04:47:50] 2025-10-11 08:46:53,762 | INFO     | . payload setup = 57 s
[2025-10-11 04:47:50] 2025-10-11 08:46:53,762 | INFO     | . stage-in = 0 s
[2025-10-11 04:47:50] 2025-10-11 08:46:53,762 | INFO     | . payload execution = 21810 s
[2025-10-11 04:47:50] 2025-10-11 08:46:53,762 | INFO     | . stage-out = 7 s
[2025-10-11 04:47:50] 2025-10-11 08:46:53,762 | INFO     | . log creation = 3 s
[2025-10-11 04:47:50] 2025-10-11 08:46:53,762 | INFO     | ..............................
[2025-10-11 04:47:50] 2025-10-11 08:46:54,184 | INFO     | time since job start (22014s) is within the limit (172800.0s)
[2025-10-11 04:47:50] 2025-10-11 08:46:54,230 | INFO     | 
[2025-10-11 04:47:50] 2025-10-11 08:46:54,230 | INFO     | job summary report
[2025-10-11 04:47:50] 2025-10-11 08:46:54,230 | INFO     | --------------------------------------------------
[2025-10-11 04:47:50] 2025-10-11 08:46:54,230 | INFO     | PanDA job id: 6837668374
[2025-10-11 04:47:50] 2025-10-11 08:46:54,230 | INFO     | task id: 46676269
[2025-10-11 04:47:50] 2025-10-11 08:46:54,230 | INFO     | errors: (none)
[2025-10-11 04:47:50] 2025-10-11 08:46:54,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 04:47:50] 2025-10-11 08:46:54,231 | INFO     | pilot state: finished 
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | transexitcode: 0
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | exeerrorcode: 0
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | exeerrordiag: 
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | exitcode: 0
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | exitmsg: OK
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | cpuconsumptiontime: 47489 s
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | nevents: 400
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | neventsw: 0
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | pid: 2786309
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | pgrp: 2786309
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | corecount: 8
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | event service: False
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | sizes: {0: 2348029, 2: 2348714, 3: 2348742, 4: 2348941, 15: 2348941, 26: 2348969, 37: 2349125, 42: 2349415, 49: 2349471, 21870: 2382921, 21878: 2392255, 21922: 239
[2025-10-11 04:47:50] 2025-10-11 08:46:54,232 | INFO     | --------------------------------------------------
[2025-10-11 04:47:50] 2025-10-11 08:46:54,233 | INFO     | 
[2025-10-11 04:47:50] 2025-10-11 08:46:54,235 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 04:47:50] 2025-10-11 08:46:54,671 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,671 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,671 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,672 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 04:47:50] 2025-10-11 08:46:54,673 | INFO     | job 6837668374 has completed (purged errors)
[2025-10-11 04:47:50] 2025-10-11 08:46:54,673 | INFO     | overall cleanup function is called
[2025-10-11 04:47:50] 2025-10-11 08:46:55,797 | INFO     | --- collectZombieJob: --- 10, [2786309]
[2025-10-11 04:47:50] 2025-10-11 08:46:55,798 | INFO     | zombie collector waiting for pid 2786309
[2025-10-11 04:47:50] 2025-10-11 08:46:55,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 04:47:50] 2025-10-11 08:46:55,798 | INFO     | collected zombie processes
[2025-10-11 04:47:50] 2025-10-11 08:46:55,798 | INFO     | will attempt to kill all subprocesses of pid=2786309
[2025-10-11 04:47:50] 2025-10-11 08:47:02,537 | INFO     | number of running child processes to parent process 2786309: 1
[2025-10-11 04:47:50] 2025-10-11 08:47:02,537 | INFO     | maximum number of monitored processes: 6
[2025-10-11 04:47:50] 2025-10-11 08:47:02,567 | INFO     | aborting job monitoring since job object (job id=6837668374) has expired
[2025-10-11 04:47:50] 2025-10-11 08:47:03,014 | INFO     | process IDs to be killed: [2786309] (in reverse order)
[2025-10-11 04:47:50] 2025-10-11 08:47:03,432 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 04:47:50] 2025-10-11 08:47:03,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 04:47:50] 2025-10-11 08:47:03,502 | INFO     | did not find any defunct processes belonging to 2786309
[2025-10-11 04:47:50] 2025-10-11 08:47:03,529 | INFO     | did not find any defunct processes belonging to 2786309
[2025-10-11 04:47:50] 2025-10-11 08:47:03,530 | INFO     | ready for new job
[2025-10-11 04:47:50] 2025-10-11 08:47:03,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 04:47:50] 2025-10-11 08:47:03,537 | INFO     | ***************************************
[2025-10-11 04:47:50] 2025-10-11 08:47:03,537 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 04:47:50] 2025-10-11 08:47:03,537 | INFO     | ***************************************
[2025-10-11 04:47:50] 2025-10-11 08:47:03,537 | INFO     | 
[2025-10-11 04:47:50] 2025-10-11 08:47:03,561 | INFO     | architecture information:
[2025-10-11 04:47:50] 2025-10-11 08:47:03,566 | INFO     | executing command: cat /etc/os-release
[2025-10-11 04:47:50] 2025-10-11 08:47:03,628 | INFO     | cat /etc/os-release:
[2025-10-11 04:47:50] NAME="CentOS Linux"
[2025-10-11 04:47:50] VERSION="7 (Core)"
[2025-10-11 04:47:50] ID="centos"
[2025-10-11 04:47:50] ID_LIKE="rhel fedora"
[2025-10-11 04:47:50] VERSION_ID="7"
[2025-10-11 04:47:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 04:47:50] ANSI_COLOR="0;31"
[2025-10-11 04:47:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 04:47:50] HOME_URL="https://www.centos.org/"
[2025-10-11 04:47:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 04:47:50] 
[2025-10-11 04:47:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 04:47:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 04:47:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 04:47:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 04:47:50] 
[2025-10-11 04:47:50] 2025-10-11 08:47:03,628 | INFO     | ***************************************
[2025-10-11 04:47:50] 2025-10-11 08:47:04,135 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 04:47:50] 2025-10-11 08:47:04,252 | INFO     | sufficient remaining disk space (93534027776 B)
[2025-10-11 04:47:50] 2025-10-11 08:47:04,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 04:47:50] 2025-10-11 08:47:04,252 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 04:47:50] 2025-10-11 08:47:04,252 | INFO     | update_server=False
[2025-10-11 04:47:50] 2025-10-11 08:47:04,253 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 04:47:50] 2025-10-11 08:47:04,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 04:47:50] 2025-10-11 08:47:04,253 | INFO     | aborting loop
[2025-10-11 04:47:50] 2025-10-11 08:47:04,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 04:47:50] 2025-10-11 08:47:04,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 04:47:50] 2025-10-11 08:47:04,514 | INFO     | all job control threads have been joined
[2025-10-11 04:47:50] 2025-10-11 08:47:04,515 | INFO     | all data control threads have been joined
[2025-10-11 04:47:50] 2025-10-11 08:47:04,805 | INFO     | all payload control threads have been joined
[2025-10-11 04:47:50] 2025-10-11 08:47:05,259 | INFO     | [job] retrieve thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:05,259 | INFO     | [job] job monitor thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:05,260 | INFO     | [job] queue monitor thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:05,309 | INFO     | [payload] validate_post thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:05,473 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:05,520 | INFO     | [job] control thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:05,520 | INFO     | [data] control thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:05,798 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:05,811 | INFO     | [payload] control thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:06,260 | INFO     | [data] copytool_out thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:06,357 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:06,396 | INFO     | [payload] failed_post thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:06,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 04:47:50] 2025-10-11 08:47:06,715 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:06,716 | INFO     | [data] copytool_in thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:06,721 | INFO     | [job] validate thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:10,753 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 04:47:50] 2025-10-11 08:47:29,980 | INFO     | PID=2771377 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 04:47:50] 2025-10-11 08:47:29,980 | INFO     | .. there are 47 such processes running
[2025-10-11 04:47:50] 2025-10-11 08:47:29,980 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 04:47:50] 2025-10-11 08:47:29,980 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 04:47:50] 2025-10-11 08:47:29,980 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 04:47:50] 2025-10-11 08:47:41,193 | INFO     | [monitor] cgroup control has ended
[2025-10-11 04:47:50] 2025-10-11 08:47:42,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139709243860800)>', '<ExcThread(monitor, started 139708734613248)>']
[2025-10-11 04:47:50] 2025-10-11 08:47:43,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 04:47:50] 2025-10-11 08:47:43,132 | INFO     | [monitor] control thread has ended
[2025-10-11 04:47:50] 2025-10-11 08:47:47,653 | INFO     | all workflow threads have been joined
[2025-10-11 04:47:50] 2025-10-11 08:47:47,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 04:47:50] 2025-10-11 08:47:47,654 | INFO     | traces error code: 0
[2025-10-11 04:47:50] 2025-10-11 08:47:47,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 04:47:50] 2025-10-11 08:47:48,269 [wrapper] ==== pilot stdout END ====
[2025-10-11 04:47:50] 2025-10-11 08:47:48,324 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 04:47:50] 2025-10-11 08:47:48,380 [wrapper] pilotpid: 2771377
[2025-10-11 04:47:50] 2025-10-11 08:47:48,434 [wrapper] Pilot exit status: 0
[2025-10-11 04:47:50] 2025-10-11 08:47:48,672 [wrapper] pandaids: 6837668374
[2025-10-11 04:47:50] 2025-10-11 08:47:48,955 [wrapper] cleanup supervisor_pilot 4094682 2771378
[2025-10-11 04:47:50] 2025-10-11 08:47:49,004 [wrapper] Test setup, not cleaning
[2025-10-11 04:47:50] 2025-10-11 08:47:49,038 [wrapper] apfmon messages muted
[2025-10-11 04:47:50] 2025-10-11 08:47:49,066 [wrapper] ==== wrapper stdout END ====
[2025-10-11 04:47:50] 2025-10-11 08:47:49,128 [wrapper] ==== wrapper stderr END ====
[2025-10-11 04:47:50]  *** Error codes and diagnostics ***
[2025-10-11 04:47:50]     "exeErrorCode": 0,
[2025-10-11 04:47:50]     "exeErrorDiag": "",
[2025-10-11 04:47:50]     "pilotErrorCode": 0,
[2025-10-11 04:47:50]     "pilotErrorDiag": "",
[2025-10-11 04:47:50]  *** Listing of results directory ***
[2025-10-11 04:47:50] total 421948
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 11:50 pilot3.tar.gz
[2025-10-11 04:47:50] -rwx------. 1 boincer umatlas     36292 Oct 10 11:51 runpilot2-wrapper.sh
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 11:51 queuedata.json
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas       100 Oct 10 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 04:47:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 22:38 run_atlas
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas       105 Oct 10 22:38 job.xml
[2025-10-11 04:47:50] -rw-r--r--. 2 boincer umatlas 224823692 Oct 10 22:38 EVNT.46676267._001671.pool.root.1
[2025-10-11 04:47:50] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 22:38 input.tar.gz
[2025-10-11 04:47:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 22:38 start_atlas.sh
[2025-10-11 04:47:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 22:38 shared
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas         0 Oct 10 22:38 boinc_lockfile
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 22:38 pandaJob.out
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas    975509 Oct 10 22:39 agis_schedconf.cvmfs.json
[2025-10-11 04:47:50] drwx------. 5 boincer umatlas      4096 Oct 10 22:40 pilot3
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas 197440870 Oct 11 04:44 HITS.46676269._041217.pool.root.1
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas       531 Oct 11 04:44 boinc_task_state.xml
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas      1052 Oct 11 04:46 memory_monitor_summary.json
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas   1560580 Oct 11 04:46 agis_ddmendpoints.agis.ALL.json
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas    525947 Oct 11 04:46 log.46676269._041217.job.log.tgz.1
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas      6860 Oct 11 04:46 init_data.xml
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas        95 Oct 11 04:46 pilot_heartbeat.json
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas      7841 Oct 11 04:46 heartbeat.json
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas        28 Oct 11 04:47 wrapper_checkpoint.txt
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas      4824 Oct 11 04:47 pilotlog.txt
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas   2428942 Oct 11 04:47 log.46676269._041217.job.log.1
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas       357 Oct 11 04:47 output.list
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 04:47 boinc_mmap_file
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas       620 Oct 11 04:47 runtime_log
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas   2969600 Oct 11 04:47 result.tar.gz
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 04:47 runtime_log.err
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas       660 Oct 11 04:47 22eKDmlZUR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYDQMDmxFbBhn.diag
[2025-10-11 04:47:50] -rw-r--r--. 1 boincer umatlas     16466 Oct 11 04:47 stderr.txt
[2025-10-11 04:47:50] HITS file was successfully produced:
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas 197440870 Oct 11 04:44 shared/HITS.pool.root.1
[2025-10-11 04:47:50]  *** Contents of shared directory: ***
[2025-10-11 04:47:50] total 415856
[2025-10-11 04:47:50] -rw-r--r--. 2 boincer umatlas 224823692 Oct 10 22:38 ATLAS.root_0
[2025-10-11 04:47:50] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 22:38 input.tar.gz
[2025-10-11 04:47:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 22:38 start_atlas.sh
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas 197440870 Oct 11 04:44 HITS.pool.root.1
[2025-10-11 04:47:50] -rw-------. 1 boincer umatlas   2969600 Oct 11 04:47 result.tar.gz
04:48:11 (2766175): run_atlas exited; CPU time 48644.505004
04:48:11 (2766175): called boinc_finish(0)

</stderr_txt>
]]>

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