Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:39:05 (2365478): wrapper (7.7.26015): starting
20:39:05 (2365478): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 20:39:05] Arguments: --nthreads 8
[2025-10-10 20:39:05] Threads: 8
[2025-10-10 20:39:05] Checking for CVMFS
[2025-10-10 20:39:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 20:39:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 20:39:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 20:39:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 20:39:07] 2.13.2.0 3144059 127094 481052 151566 1 412 28499883 40960000 29572 16776704 1 250673010 99.683 211203894 21623 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 20:39:07] CVMFS is ok
[2025-10-10 20:39:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 20:39:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 20:39:07] Further information can be found at the LHC@home message board.
[2025-10-10 20:39:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 20:39:07] Checking for apptainer binary...
[2025-10-10 20:39:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 20:39:07] Running /usr/bin/apptainer --version
[2025-10-10 20:39:07] apptainer version 1.4.3-1.el9
[2025-10-10 20:39:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 20:39:08] c7-11-15.aglt2.org
[2025-10-10 20:39:08] apptainer works
[2025-10-10 20:39:08] Set ATHENA_PROC_NUMBER=8
[2025-10-10 20:39:08] Set ATHENA_CORE_NUMBER=8
[2025-10-10 20:39:09] Starting ATLAS job with PandaID=6837631344
[2025-10-10 20:39:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:13:02 (506033): wrapper (7.7.26015): starting
07:13:02 (506033): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 07:13:02] Arguments: --nthreads 9
[2025-10-11 07:13:02] Threads: 9
[2025-10-11 07:13:02] This job has been restarted, cleaning up previous attempt
[2025-10-11 07:13:02] Checking for CVMFS
[2025-10-11 07:13:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:13:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:13:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:13:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:13:02] 2.13.2.0 3144059 127728 476396 151582 0 137 35131959 40960000 28539 16776704 1 253063114 99.683 212617772 21617 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 07:13:02] CVMFS is ok
[2025-10-11 07:13:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:13:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:13:02] Further information can be found at the LHC@home message board.
[2025-10-11 07:13:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:13:02] Checking for apptainer binary...
[2025-10-11 07:13:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:13:02] Running /usr/bin/apptainer --version
[2025-10-11 07:13:02] apptainer version 1.4.3-1.el9
[2025-10-11 07:13:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:13:03] c7-11-15.aglt2.org
[2025-10-11 07:13:03] apptainer works
[2025-10-11 07:13:03] Set ATHENA_PROC_NUMBER=9
[2025-10-11 07:13:03] Set ATHENA_CORE_NUMBER=9
[2025-10-11 07:13:03] Starting ATLAS job with PandaID=6837631344
[2025-10-11 07:13:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:46:38]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:46:38] 2025-10-11 13:46:01,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:46:38] 2025-10-11 13:46:01,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:46:38] 2025-10-11 13:46:01,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:46:38] 2025-10-11 13:46:01,870 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:46:38] 2025-10-11 13:46:01,871 | INFO     | sum of square deviations: 1046512629.0933348
[2025-10-11 09:46:38] 2025-10-11 13:46:01,871 | INFO     | sum of deviations: -2864298443.3466663
[2025-10-11 09:46:38] 2025-10-11 13:46:01,872 | INFO     | mean x: 1760185773.2933333
[2025-10-11 09:46:38] 2025-10-11 13:46:01,872 | INFO     | mean y: 2180527.053333333
[2025-10-11 09:46:38] 2025-10-11 13:46:01,872 | INFO     | -- intersect: 4819797849.849532
[2025-10-11 09:46:38] 2025-10-11 13:46:01,872 | INFO     | intersect: 4819797849.849532
[2025-10-11 09:46:38] 2025-10-11 13:46:01,872 | INFO     | chi2: 2.1567774115861544
[2025-10-11 09:46:38] 2025-10-11 13:46:01,872 | INFO     | sum of square deviations: 945347023.3379289
[2025-10-11 09:46:38] 2025-10-11 13:46:01,873 | INFO     | sum of deviations: 5320406845.455177
[2025-10-11 09:46:38] 2025-10-11 13:46:01,873 | INFO     | mean x: 1760185620.8206897
[2025-10-11 09:46:38] 2025-10-11 13:46:01,873 | INFO     | mean y: 2192522.248275862
[2025-10-11 09:46:38] 2025-10-11 13:46:01,873 | INFO     | -- intersect: -9904120604.141651
[2025-10-11 09:46:38] 2025-10-11 13:46:01,873 | INFO     | intersect: -9904120604.141651
[2025-10-11 09:46:38] 2025-10-11 13:46:01,873 | INFO     | chi2: 1.496040689590308
[2025-10-11 09:46:38] 2025-10-11 13:46:01,874 | INFO     | current chi2=1.496040689590308 (change=30.635369159857913 %)
[2025-10-11 09:46:38] 2025-10-11 13:46:01,874 | INFO     | sum of square deviations: 850890838.5357145
[2025-10-11 09:46:38] 2025-10-11 13:46:01,874 | INFO     | sum of deviations: 5314126761.785715
[2025-10-11 09:46:38] 2025-10-11 13:46:01,874 | INFO     | mean x: 1760185468.3214285
[2025-10-11 09:46:38] 2025-10-11 13:46:01,875 | INFO     | mean y: 2192514.2714285715
[2025-10-11 09:46:38] 2025-10-11 13:46:01,875 | INFO     | -- intersect: -10990814202.089657
[2025-10-11 09:46:38] 2025-10-11 13:46:01,875 | INFO     | intersect: -10990814202.089657
[2025-10-11 09:46:38] 2025-10-11 13:46:01,875 | INFO     | chi2: 1.497167435919255
[2025-10-11 09:46:38] 2025-10-11 13:46:01,875 | INFO     | current chi2=1.497167435919255 (change=-0.07531521948481285 %)
[2025-10-11 09:46:38] 2025-10-11 13:46:01,875 | INFO     | right removable region: 139
[2025-10-11 09:46:38] 2025-10-11 13:46:01,875 | INFO     | sum of square deviations: 945274433.3379289
[2025-10-11 09:46:38] 2025-10-11 13:46:01,876 | INFO     | sum of deviations: -22937867690.662075
[2025-10-11 09:46:38] 2025-10-11 13:46:01,876 | INFO     | mean x: 1760185925.8206897
[2025-10-11 09:46:38] 2025-10-11 13:46:01,876 | INFO     | mean y: 2210352.8206896554
[2025-10-11 09:46:38] 2025-10-11 13:46:01,876 | INFO     | -- intersect: 42714580912.62695
[2025-10-11 09:46:38] 2025-10-11 13:46:01,876 | INFO     | intersect: 42714580912.62695
[2025-10-11 09:46:38] 2025-10-11 13:46:01,876 | INFO     | chi2: 0.7442123983128909
[2025-10-11 09:46:38] 2025-10-11 13:46:01,877 | INFO     | current chi2=0.7442123983128909 (change=65.4942418111855 %)
[2025-10-11 09:46:38] 2025-10-11 13:46:01,877 | INFO     | sum of square deviations: 850789151.5428582
[2025-10-11 09:46:38] 2025-10-11 13:46:01,877 | INFO     | sum of deviations: -22135930833.971428
[2025-10-11 09:46:38] 2025-10-11 13:46:01,877 | INFO     | mean x: 1760186078.3428571
[2025-10-11 09:46:38] 2025-10-11 13:46:01,878 | INFO     | mean y: 2209037.9785714285
[2025-10-11 09:46:38] 2025-10-11 13:46:01,878 | INFO     | -- intersect: 45798934600.89747
[2025-10-11 09:46:38] 2025-10-11 13:46:01,878 | INFO     | intersect: 45798934600.89747
[2025-10-11 09:46:38] 2025-10-11 13:46:01,878 | INFO     | chi2: 0.7412050860288951
[2025-10-11 09:46:38] 2025-10-11 13:46:01,878 | INFO     | current chi2=0.7412050860288951 (change=0.40409327912478354 %)
[2025-10-11 09:46:38] 2025-10-11 13:46:01,878 | INFO     | left removable region: 20
[2025-10-11 09:46:38] 2025-10-11 13:46:01,878 | INFO     | sum of square deviations: 522482932.78991604
[2025-10-11 09:46:38] 2025-10-11 13:46:01,880 | INFO     | sum of deviations: -10636679063.54622
[2025-10-11 09:46:38] 2025-10-11 13:46:01,881 | INFO     | mean x: 1760186047.8991597
[2025-10-11 09:46:38] 2025-10-11 13:46:01,881 | INFO     | mean y: 2219566.537815126
[2025-10-11 09:46:38] 2025-10-11 13:46:01,881 | INFO     | -- intersect: 35835991176.38149
[2025-10-11 09:46:38] 2025-10-11 13:46:01,881 | INFO     | intersect: 35835991176.38149
[2025-10-11 09:46:38] 2025-10-11 13:46:01,882 | INFO     | chi2: 0.05253056976404727
[2025-10-11 09:46:38] 2025-10-11 13:46:01,882 | INFO     | -- intersect: 35835991176.38149
[2025-10-11 09:46:38] 2025-10-11 13:46:01,882 | INFO     | current memory leak: -20.36 B/s (using 119 data points, chi2=0.05)
[2025-10-11 09:46:38] 2025-10-11 13:46:01,883 | INFO     | could have reported an average CPU frequency of 3288 MHz (9 samples)
[2025-10-11 09:46:38] 2025-10-11 13:46:01,883 | INFO     | ..............................
[2025-10-11 09:46:38] 2025-10-11 13:46:01,883 | INFO     | . Timing measurements:
[2025-10-11 09:46:38] 2025-10-11 13:46:01,883 | INFO     | . get job = 0 s
[2025-10-11 09:46:38] 2025-10-11 13:46:01,883 | INFO     | . initial setup = 2 s
[2025-10-11 09:46:38] 2025-10-11 13:46:01,883 | INFO     | . payload setup = 7 s
[2025-10-11 09:46:38] 2025-10-11 13:46:01,883 | INFO     | . stage-in = 0 s
[2025-10-11 09:46:38] 2025-10-11 13:46:01,883 | INFO     | . payload execution = 9127 s
[2025-10-11 09:46:38] 2025-10-11 13:46:01,883 | INFO     | . stage-out = 0 s
[2025-10-11 09:46:38] 2025-10-11 13:46:01,884 | INFO     | . log creation = 0 s
[2025-10-11 09:46:38] 2025-10-11 13:46:01,884 | INFO     | ..............................
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | 
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | job summary report
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | --------------------------------------------------
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | PanDA job id: 6837631344
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | task id: 46676269
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | errors: (none)
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | pilot state: finished 
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | transexitcode: 0
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | exeerrorcode: 0
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | exeerrordiag: 
[2025-10-11 09:46:38] 2025-10-11 13:46:01,970 | INFO     | exitcode: 0
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | exitmsg: OK
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | cpuconsumptiontime: 33592 s
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | nevents: 400
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | neventsw: 0
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | pid: 537255
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | pgrp: 537255
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | corecount: 9
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | event service: False
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | sizes: {0: 2348628, 1: 2348883, 6: 2349145, 11: 2349173, 9139: 2377654, 9140: 2386652, 9141: 2386836, 9150: 2387094}
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | --------------------------------------------------
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | 
[2025-10-11 09:46:38] 2025-10-11 13:46:01,971 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 09:46:38] 2025-10-11 13:46:02,006 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,006 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,006 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:46:38] 2025-10-11 13:46:02,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,008 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:46:38] 2025-10-11 13:46:02,008 | INFO     | job 6837631344 has completed (purged errors)
[2025-10-11 09:46:38] 2025-10-11 13:46:02,008 | INFO     | overall cleanup function is called
[2025-10-11 09:46:38] 2025-10-11 13:46:03,017 | INFO     | --- collectZombieJob: --- 10, [537255]
[2025-10-11 09:46:38] 2025-10-11 13:46:03,017 | INFO     | zombie collector waiting for pid 537255
[2025-10-11 09:46:38] 2025-10-11 13:46:03,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:46:38] 2025-10-11 13:46:03,017 | INFO     | collected zombie processes
[2025-10-11 09:46:38] 2025-10-11 13:46:03,017 | INFO     | will attempt to kill all subprocesses of pid=537255
[2025-10-11 09:46:38] 2025-10-11 13:46:03,472 | INFO     | process IDs to be killed: [537255] (in reverse order)
[2025-10-11 09:46:38] 2025-10-11 13:46:03,674 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:46:38] 2025-10-11 13:46:03,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:46:38] 2025-10-11 13:46:03,694 | INFO     | did not find any defunct processes belonging to 537255
[2025-10-11 09:46:38] 2025-10-11 13:46:03,712 | INFO     | did not find any defunct processes belonging to 537255
[2025-10-11 09:46:38] 2025-10-11 13:46:03,713 | INFO     | ready for new job
[2025-10-11 09:46:38] 2025-10-11 13:46:03,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:46:38] 2025-10-11 13:46:03,715 | INFO     | ***************************************
[2025-10-11 09:46:38] 2025-10-11 13:46:03,715 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:46:38] 2025-10-11 13:46:03,715 | INFO     | ***************************************
[2025-10-11 09:46:38] 2025-10-11 13:46:03,715 | INFO     | 
[2025-10-11 09:46:38] 2025-10-11 13:46:03,731 | INFO     | architecture information:
[2025-10-11 09:46:38] 2025-10-11 13:46:03,732 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:46:38] 2025-10-11 13:46:03,753 | INFO     | cat /etc/os-release:
[2025-10-11 09:46:38] NAME="CentOS Linux"
[2025-10-11 09:46:38] VERSION="7 (Core)"
[2025-10-11 09:46:38] ID="centos"
[2025-10-11 09:46:38] ID_LIKE="rhel fedora"
[2025-10-11 09:46:38] VERSION_ID="7"
[2025-10-11 09:46:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:46:38] ANSI_COLOR="0;31"
[2025-10-11 09:46:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:46:38] HOME_URL="https://www.centos.org/"
[2025-10-11 09:46:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:46:38] 
[2025-10-11 09:46:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:46:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:46:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:46:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:46:38] 
[2025-10-11 09:46:38] 2025-10-11 13:46:03,754 | INFO     | ***************************************
[2025-10-11 09:46:38] 2025-10-11 13:46:04,257 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 09:46:38] 2025-10-11 13:46:04,301 | INFO     | sufficient remaining disk space (83815825408 B)
[2025-10-11 09:46:38] 2025-10-11 13:46:04,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:46:38] 2025-10-11 13:46:04,301 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:46:38] 2025-10-11 13:46:04,301 | INFO     | update_server=False
[2025-10-11 09:46:38] 2025-10-11 13:46:04,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:46:38] 2025-10-11 13:46:04,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:46:38] 2025-10-11 13:46:04,301 | INFO     | aborting loop
[2025-10-11 09:46:38] 2025-10-11 13:46:05,140 | INFO     | all data control threads have been joined
[2025-10-11 09:46:38] 2025-10-11 13:46:05,307 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:05,309 | INFO     | [job] validate thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:05,313 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:05,383 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:05,427 | INFO     | all payload control threads have been joined
[2025-10-11 09:46:38] 2025-10-11 13:46:05,554 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:05,572 | INFO     | all job control threads have been joined
[2025-10-11 09:46:38] 2025-10-11 13:46:05,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:46:38] 2025-10-11 13:46:05,581 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:05,583 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:05,692 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:05,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:06,146 | INFO     | [data] control thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:06,429 | INFO     | [payload] control thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:06,577 | INFO     | [job] control thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:06,796 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:06,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:46:38] 2025-10-11 13:46:07,579 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:07,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:46:38] 2025-10-11 13:46:08,000 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:11,661 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:46:38] 2025-10-11 13:46:31,814 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:46:38] 2025-10-11 13:46:33,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139715068196672)>', '<ExcThread(monitor, started 139714707302144)>']
[2025-10-11 09:46:38] 2025-10-11 13:46:34,887 | INFO     | PID=517271 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 09:46:38] 2025-10-11 13:46:34,887 | INFO     | .. there are 38 such processes running
[2025-10-11 09:46:38] 2025-10-11 13:46:34,887 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:46:38] 2025-10-11 13:46:34,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:46:38] 2025-10-11 13:46:34,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:46:38] 2025-10-11 13:46:34,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:46:38] 2025-10-11 13:46:34,888 | INFO     | [monitor] control thread has ended
[2025-10-11 09:46:38] 2025-10-11 13:46:38,106 | INFO     | all workflow threads have been joined
[2025-10-11 09:46:38] 2025-10-11 13:46:38,106 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:46:38] 2025-10-11 13:46:38,119 | INFO     | traces error code: 0
[2025-10-11 09:46:38] 2025-10-11 13:46:38,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:46:38] 2025-10-11 13:46:38,374 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:46:38] 2025-10-11 13:46:38,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:46:38] 2025-10-11 13:46:38,379 [wrapper] pilotpid: 517271
[2025-10-11 09:46:38] 2025-10-11 13:46:38,381 [wrapper] Pilot exit status: 0
[2025-10-11 09:46:38] 2025-10-11 13:46:38,399 [wrapper] pandaids: 6837631344 6837631344
[2025-10-11 09:46:38] 2025-10-11 13:46:38,492 [wrapper] cleanup supervisor_pilot  872941 517272
[2025-10-11 09:46:38] 2025-10-11 13:46:38,495 [wrapper] Test setup, not cleaning
[2025-10-11 09:46:38] 2025-10-11 13:46:38,498 [wrapper] apfmon messages muted
[2025-10-11 09:46:38] 2025-10-11 13:46:38,510 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:46:38] 2025-10-11 13:46:38,513 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:46:38]  *** Error codes and diagnostics ***
[2025-10-11 09:46:38]     "exeErrorCode": 0,
[2025-10-11 09:46:38]     "exeErrorDiag": "",
[2025-10-11 09:46:38]     "pilotErrorCode": 0,
[2025-10-11 09:46:38]     "pilotErrorDiag": "",
[2025-10-11 09:46:38]  *** Listing of results directory ***
[2025-10-11 09:46:38] total 638408
[2025-10-11 09:46:38] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 10:05 pilot3.tar.gz
[2025-10-11 09:46:38] -rwx------. 1 boincer umatlas     36292 Oct 10 10:18 runpilot2-wrapper.sh
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 10:18 queuedata.json
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas       100 Oct 10 20:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:46:38] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 20:39 run_atlas
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas       105 Oct 10 20:39 job.xml
[2025-10-11 09:46:38] -rw-r--r--. 3 boincer umatlas 224337168 Oct 10 20:39 EVNT.46676267._001616.pool.root.1
[2025-10-11 09:46:38] -rw-r--r--. 3 boincer umatlas 224337168 Oct 10 20:39 ATLAS.root_0
[2025-10-11 09:46:38] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 20:39 shared
[2025-10-11 09:46:38] -rw-r--r--. 2 boincer umatlas    569675 Oct 10 20:39 input.tar.gz
[2025-10-11 09:46:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 20:39 start_atlas.sh
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas         0 Oct 10 20:39 boinc_lockfile
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 07:13 pandaJob.out
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas    975517 Oct 11 07:13 agis_schedconf.cvmfs.json
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas   1560580 Oct 11 07:13 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas       531 Oct 11 09:44 boinc_task_state.xml
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas 197911225 Oct 11 09:44 HITS.46676269._039822.pool.root.1
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas      1043 Oct 11 09:45 memory_monitor_summary.json
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas      6897 Oct 11 09:45 init_data.xml
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas    391588 Oct 11 09:45 log.46676269._039822.job.log.tgz.1
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas        96 Oct 11 09:45 pilot_heartbeat.json
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas      7799 Oct 11 09:46 heartbeat.json
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 09:46 boinc_mmap_file
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas        28 Oct 11 09:46 wrapper_checkpoint.txt
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas      4823 Oct 11 09:46 pilotlog.txt
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas   1231413 Oct 11 09:46 log.46676269._039822.job.log.1
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas       357 Oct 11 09:46 output.list
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas       620 Oct 11 09:46 runtime_log
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas   1638400 Oct 11 09:46 result.tar.gz
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas       781 Oct 11 09:46 tHMLDm77SR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmv4PMDmnPJ2Ro.diag
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas      8788 Oct 11 09:46 runtime_log.err
[2025-10-11 09:46:38] -rw-r--r--. 1 boincer umatlas     23140 Oct 11 09:46 stderr.txt
[2025-10-11 09:46:38] HITS file was successfully produced:
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas 197911225 Oct 11 09:44 shared/HITS.pool.root.1
[2025-10-11 09:46:38]  *** Contents of shared directory: ***
[2025-10-11 09:46:38] total 414536
[2025-10-11 09:46:38] -rw-r--r--. 3 boincer umatlas 224337168 Oct 10 20:39 ATLAS.root_0
[2025-10-11 09:46:38] -rw-r--r--. 2 boincer umatlas    569675 Oct 10 20:39 input.tar.gz
[2025-10-11 09:46:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 20:39 start_atlas.sh
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas 197911225 Oct 11 09:44 HITS.pool.root.1
[2025-10-11 09:46:38] -rw-------. 1 boincer umatlas   1638400 Oct 11 09:46 result.tar.gz
09:46:40 (506033): run_atlas exited; CPU time 33740.629641
09:46:40 (506033): called boinc_finish(0)

</stderr_txt>
]]>

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