Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-11 14:59:57 (4380): vboxwrapper version 26210
2025-10-11 14:59:57 (4380): BOINC client version: 8.2.4
2025-10-11 14:59:58 (4380): Detected: VirtualBox VboxManage Interface (Version: 6.1.26)
2025-10-11 14:59:58 (4380): Successfully copied 'init_data.xml' to the shared directory.
2025-10-11 14:59:58 (4380): Create VM. (boinc_d3f53b0bead32466, slot#1)
2025-10-11 14:59:59 (4380): Setting Memory Size for VM. (4800MB)
2025-10-11 14:59:59 (4380): Setting CPU Count for VM. (8)
2025-10-11 15:00:00 (4380): Setting Chipset Options for VM.
2025-10-11 15:00:00 (4380): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-11 15:00:00 (4380): Setting Boot Options for VM.
2025-10-11 15:00:01 (4380): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-11 15:00:01 (4380): Enabling VM Network Access.
2025-10-11 15:00:01 (4380): Disabling USB Support for VM.
2025-10-11 15:00:02 (4380): Disabling COM Port Support for VM.
2025-10-11 15:00:02 (4380): Disabling LPT Port Support for VM.
2025-10-11 15:00:02 (4380): Disabling Audio Support for VM.
2025-10-11 15:00:02 (4380): Disabling Clipboard Support for VM.
2025-10-11 15:00:03 (4380): Disabling Drag and Drop Support for VM.
2025-10-11 15:00:03 (4380): Adding storage controller(s) to VM.
2025-10-11 15:00:03 (4380): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-11 15:00:04 (4380): Adding VirtualBox Guest Additions to VM.
2025-10-11 15:00:04 (4380): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-11 15:00:04 (4380): forwarding host port 64295 to guest port 80
2025-10-11 15:00:05 (4380): Enabling remote desktop for VM.
2025-10-11 15:00:05 (4380): Enabling shared directory for VM.
2025-10-11 15:00:06 (4380): Starting VM using VBoxManage interface. (boinc_d3f53b0bead32466, slot#1)
2025-10-11 15:00:12 (4380): Successfully started VM. (PID = '41932')
2025-10-11 15:00:12 (4380): Reporting VM Process ID to BOINC.
2025-10-11 15:00:12 (4380): Guest Log: BIOS: VirtualBox 6.1.26
2025-10-11 15:00:12 (4380): Guest Log: CPUID EDX: 0x178bfbff
2025-10-11 15:00:12 (4380): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-11 15:00:12 (4380): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-11 15:00:12 (4380): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-11 15:00:12 (4380): Detected: Web Application Enabled (http://localhost:64295)
2025-10-11 15:00:12 (4380): Detected: Remote Desktop Enabled (localhost:64296)
2025-10-11 15:00:12 (4380): Preference change detected
2025-10-11 15:00:12 (4380): Setting CPU throttle for VM. (90%)
2025-10-11 15:00:12 (4380): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 15:00:14 (4380): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-11 15:00:14 (4380): Guest Log: BIOS: Booting from Hard Disk...
2025-10-11 15:00:17 (4380): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-11 15:00:17 (4380): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-11 15:00:17 (4380): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-11 15:00:28 (4380): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-11 15:00:28 (4380): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-11 15:00:43 (4380): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-11 15:00:43 (4380): Guest Log: 00:00:00.000241 main     Log opened 2025-10-11T15:00:41.376592000Z
2025-10-11 15:00:43 (4380): Guest Log: 00:00:00.000384 main     OS Product: Linux
2025-10-11 15:00:43 (4380): Guest Log: 00:00:00.000420 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-11 15:00:43 (4380): Guest Log: 00:00:00.000451 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-11 15:00:43 (4380): Guest Log: 00:00:00.000481 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-11 15:00:43 (4380): Guest Log: 00:00:00.000482 main     Process ID: 1369
2025-10-11 15:00:43 (4380): Guest Log: 00:00:00.000483 main     Package type: LINUX_64BITS_GENERIC
2025-10-11 15:00:43 (4380): Guest Log: 00:00:00.001437 main     5.2.32 r132073 started. Verbose level = 0
2025-10-11 15:00:44 (4380): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-11 15:00:44 (4380): Guest Log: [INFO] Mounting shared directory
2025-10-11 15:00:44 (4380): Guest Log: [INFO] Checking for init_data.xml
2025-10-11 15:00:47 (4380): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 15:00:47 (4380): Guest Log: [INFO] Detected branch: prod
2025-10-11 15:00:47 (4380): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 15:00:47 (4380): Guest Log: Copying input files
2025-10-11 15:00:49 (4380): Guest Log: Copied input files into RunAtlas.
2025-10-11 15:00:49 (4380): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-11 15:00:49 (4380): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-11 15:00:49 (4380): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-11 15:00:49 (4380): Guest Log: Further information can be found at the LHC@home message board.
2025-10-11 15:00:53 (4380): Guest Log: 00:00:10.010713 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 807 385 000ns (GuestNow=1 760 212 853 188 696 000 ns GuestLast=1 760 194 841 381 311 000 ns fSetTimeLastLoop=true )
2025-10-11 15:01:00 (4380): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 15:01:00 (4380): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 15:01:00 (4380): Guest Log: 2.6.3.0 1650 0 30204 151594 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-11 15:01:03 (4380): Guest Log: copied the webapp to /var/www
2025-10-11 15:01:03 (4380): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-11 15:01:03 (4380): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-11 15:01:04 (4380): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 15:01:04 (4380): Guest Log:  *** Starting ATLAS job. (PandaID=6837828505 taskID=46676269) ***
2025-10-11 15:01:19 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 15:01:39 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 15:04:50 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 15:05:10 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 15:15:52 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 15:16:12 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 15:19:03 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 15:19:23 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 15:32:26 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 15:32:46 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 15:37:17 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 15:37:37 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 15:37:57 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 15:38:17 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 16:00:42 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 16:01:02 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 16:16:05 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 16:16:25 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 16:18:56 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 16:19:16 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 16:27:48 (4380): VM state change detected. (old = 'running', new = 'paused')
2025-10-11 16:28:08 (4380): VM state change detected. (old = 'paused', new = 'running')
2025-10-11 16:38:35 (4380): Guest Log:  *** Job finished ***
2025-10-11 16:38:35 (4380): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:32,356 | INFO     | job.realtimelogging is not enabled
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:33,358 | INFO     | [payload] run_realtimelog thread has finished
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:53,300 | INFO     | [monitor] cgroup control has ended
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:53,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143925356352)>', '<ExcThread(monitor, started 140143465834240)>']
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:54,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:54,447 | INFO     | [monitor] control thread has ended
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,415 | INFO     | all workflow threads have been joined
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,415 | INFO     | end of generic workflow (traces error code: 0)
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,415 | INFO     | traces error code: 0
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,576 [wrapper] ==== pilot stdout END ====
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,584 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,593 [wrapper] pilotpid: 6094
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,601 [wrapper] Pilot exit status: 0
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,675 [wrapper] pandaids: 6837828505
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,720 [wrapper] cleanup supervisor_pilot  2288 6095
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,730 [wrapper] Test setup, not cleaning
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,739 [wrapper] apfmon messages muted
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,748 [wrapper] ==== wrapper stdout END ====
2025-10-11 16:38:35 (4380): Guest Log: 2025-10-11 21:34:58,755 [wrapper] ==== wrapper stderr END ====
2025-10-11 16:38:35 (4380): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 16:38:35 (4380): Guest Log:     "exeErrorCode": 0,
2025-10-11 16:38:35 (4380): Guest Log:     "exeErrorDiag": "",
2025-10-11 16:38:35 (4380): Guest Log:     "pilotErrorCode": 0,
2025-10-11 16:38:35 (4380): Guest Log:     "pilotErrorDiag": "",
2025-10-11 16:38:35 (4380): Guest Log:  *** Listing of results directory ***
2025-10-11 16:38:35 (4380): Guest Log: total 195552
2025-10-11 16:38:35 (4380): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 21:48 queuedata.json
2025-10-11 16:38:35 (4380): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 21:48 pilot3.tar.gz
2025-10-11 16:38:35 (4380): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 21:54 runpilot2-wrapper.sh
2025-10-11 16:38:35 (4380): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 11 20:00 start_atlas.sh
2025-10-11 16:38:35 (4380): Guest Log: -rwxr-xr-x. 1 atlas atlas    569683 Oct 11 20:00 input.tar.gz
2025-10-11 16:38:35 (4380): Guest Log: -rwxr-xr-x. 1 atlas atlas      8444 Oct 11 20:00 init_data.xml
2025-10-11 16:38:35 (4380): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 11 20:00 EVNT.46676267._001858.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 16:38:35 (4380): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 11 20:01 pandaJob.out
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas    975512 Oct 11 20:02 agis_schedconf.cvmfs.json
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 20:02 agis_ddmendpoints.agis.ALL.json
2025-10-11 16:38:35 (4380): Guest Log: drwx------. 5 atlas atlas      4096 Oct 11 20:02 pilot3
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas 194250812 Oct 11 21:33 HITS.46676269._045966.pool.root.1
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas        95 Oct 11 21:34 pilot_heartbeat.json
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas      1039 Oct 11 21:34 memory_monitor_summary.json
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas    330443 Oct 11 21:34 log.46676269._045966.job.log.tgz.1
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas      7823 Oct 11 21:34 heartbeat.json
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas      4684 Oct 11 21:34 pilotlog.txt
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas    750418 Oct 11 21:34 log.46676269._045966.job.log.1
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 21:34 output.list
2025-10-11 16:38:35 (4380): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 21:34 runtime_log
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas   1095680 Oct 11 21:34 result.tar.gz
2025-10-11 16:38:35 (4380): Guest Log: -rw-r--r--. 1 atlas atlas      8645 Oct 11 21:34 runtime_log.err
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas       657 Oct 11 21:34 kD1LDmfFaR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpgQMDmfnJblm.diag
2025-10-11 16:38:35 (4380): Guest Log: Looking for outputfile HITS.46676269._045966.pool.root.1
2025-10-11 16:38:35 (4380): Guest Log: HITS file was successfully produced
2025-10-11 16:38:35 (4380): Guest Log: -rw-------. 1 atlas atlas 194250812 Oct 11 21:33 /home/atlas/RunAtlas/HITS.46676269._045966.pool.root.1
2025-10-11 16:38:37 (4380): Guest Log: Successfully finished the ATLAS job!
2025-10-11 16:38:37 (4380): Guest Log: Copying the results back to the shared directory!
2025-10-11 16:38:37 (4380): Guest Log:  *** Contents of shared directory: ***
2025-10-11 16:38:37 (4380): Guest Log: total 405708
2025-10-11 16:38:37 (4380): Guest Log: -rwxrwxrwx. 1 root root 219491643 Oct 11 19:59 ATLAS.root_0
2025-10-11 16:38:37 (4380): Guest Log: -rwxrwxrwx. 1 root root 194250812 Oct 11  2025 HITS.pool.root.1
2025-10-11 16:38:37 (4380): Guest Log: -rwxrwxrwx. 1 root root      8444 Oct 11 19:59 init_data.xml
2025-10-11 16:38:37 (4380): Guest Log: -rwxrwxrwx. 1 root root    569683 Oct 11 00:28 input.tar.gz
2025-10-11 16:38:37 (4380): Guest Log: -rwxrwxrwx. 1 root root   1095680 Oct 11  2025 result.tar.gz
2025-10-11 16:38:37 (4380): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 11 00:28 start_atlas.sh
2025-10-11 16:38:37 (4380): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 16:38:37 (4380): VM Completion File Detected.
2025-10-11 16:38:37 (4380): Powering off VM.
2025-10-11 16:38:39 (4380): Successfully stopped VM.
2025-10-11 16:38:39 (4380): Deregistering VM. (boinc_d3f53b0bead32466, slot#1)
2025-10-11 16:38:39 (4380): Removing network bandwidth throttle group from VM.
2025-10-11 16:38:40 (4380): Removing VM from VirtualBox.
2025-10-11 16:38:45 (4380): called boinc_finish(0)

</stderr_txt>
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