Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:21:54 (3700616): wrapper (7.7.26015): starting
20:21:54 (3700616): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 20:21:54] Arguments: --nthreads 4
[2025-10-11 20:21:54] Threads: 4
[2025-10-11 20:21:54] Checking for CVMFS
[2025-10-11 20:21:54] No cvmfs_config command found, will try listing directly
[2025-10-11 20:21:54] CVMFS is ok
[2025-10-11 20:21:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:21:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:21:54] Further information can be found at the LHC@home message board.
[2025-10-11 20:21:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:21:54] Checking for apptainer binary...
[2025-10-11 20:21:54] which: no apptainer in ((null))
[2025-10-11 20:21:54] apptainer is not installed, using version from CVMFS
[2025-10-11 20:21:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:21:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-10-11 20:21:54] apptainer works
[2025-10-11 20:21:54] Set ATHENA_PROC_NUMBER=4
[2025-10-11 20:21:54] Set ATHENA_CORE_NUMBER=4
[2025-10-11 20:21:54] Starting ATLAS job with PandaID=6837828138
[2025-10-11 20:21:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:19:45 (35122): wrapper (7.7.26015): starting
23:19:45 (35122): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 23:19:45] Arguments: --nthreads 4
[2025-10-11 23:19:45] Threads: 4
[2025-10-11 23:19:45] This job has been restarted, cleaning up previous attempt
[2025-10-11 23:19:45] Checking for CVMFS
[2025-10-11 23:19:45] No cvmfs_config command found, will try listing directly
[2025-10-11 23:19:45] CVMFS is ok
[2025-10-11 23:19:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:19:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:19:45] Further information can be found at the LHC@home message board.
[2025-10-11 23:19:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:19:45] Checking for apptainer binary...
[2025-10-11 23:19:45] which: no apptainer in ((null))
[2025-10-11 23:19:45] apptainer is not installed, using version from CVMFS
[2025-10-11 23:19:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:19:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-10-11 23:19:46] apptainer works
[2025-10-11 23:19:46] Set ATHENA_PROC_NUMBER=4
[2025-10-11 23:19:46] Set ATHENA_CORE_NUMBER=4
[2025-10-11 23:19:46] Starting ATLAS job with PandaID=6837828138
[2025-10-11 23:19:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:03:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:03:07] 2025-10-12 00:01:36,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 02:03:07] 2025-10-12 00:01:36,316 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:03:07] 2025-10-12 00:01:36,317 | INFO     | sum of square deviations: 1246386160.0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,318 | INFO     | sum of deviations: -1174460998.999998
[2025-10-12 02:03:07] 2025-10-12 00:01:36,318 | INFO     | mean x: 1760222453.0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,318 | INFO     | mean y: 2322301.1383647798
[2025-10-12 02:03:07] 2025-10-12 00:01:36,318 | INFO     | -- intersect: 1660967660.7856567
[2025-10-12 02:03:07] 2025-10-12 00:01:36,318 | INFO     | intersect: 1660967660.7856567
[2025-10-12 02:03:07] 2025-10-12 00:01:36,318 | INFO     | chi2: 2.0807354673810856
[2025-10-12 02:03:07] 2025-10-12 00:01:36,319 | INFO     | sum of square deviations: 1132458442.5
[2025-10-12 02:03:07] 2025-10-12 00:01:36,320 | INFO     | sum of deviations: 8495221150.5
[2025-10-12 02:03:07] 2025-10-12 00:01:36,320 | INFO     | mean x: 1760222300.5
[2025-10-12 02:03:07] 2025-10-12 00:01:36,320 | INFO     | mean y: 2334913.564935065
[2025-10-12 02:03:07] 2025-10-12 00:01:36,320 | INFO     | -- intersect: -13202103461.920412
[2025-10-12 02:03:07] 2025-10-12 00:01:36,320 | INFO     | intersect: -13202103461.920412
[2025-10-12 02:03:07] 2025-10-12 00:01:36,320 | INFO     | chi2: 1.3259130782695758
[2025-10-12 02:03:07] 2025-10-12 00:01:36,320 | INFO     | current chi2=1.3259130782695758 (change=36.27671085270468 %)
[2025-10-12 02:03:07] 2025-10-12 00:01:36,321 | INFO     | sum of square deviations: 1025693650.0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,321 | INFO     | sum of deviations: 8269548631.000004
[2025-10-12 02:03:07] 2025-10-12 00:01:36,321 | INFO     | mean x: 1760222148.0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,322 | INFO     | mean y: 2334591.0201342283
[2025-10-12 02:03:07] 2025-10-12 00:01:36,322 | INFO     | -- intersect: -14189273843.18367
[2025-10-12 02:03:07] 2025-10-12 00:01:36,322 | INFO     | intersect: -14189273843.18367
[2025-10-12 02:03:07] 2025-10-12 00:01:36,322 | INFO     | chi2: 1.3271457219376486
[2025-10-12 02:03:07] 2025-10-12 00:01:36,322 | INFO     | current chi2=1.3271457219376486 (change=-0.09296564671354185 %)
[2025-10-12 02:03:07] 2025-10-12 00:01:36,322 | INFO     | right removable region: 148
[2025-10-12 02:03:07] 2025-10-12 00:01:36,322 | INFO     | sum of square deviations: 1132458442.5
[2025-10-12 02:03:07] 2025-10-12 00:01:36,323 | INFO     | sum of deviations: -20400043004.5
[2025-10-12 02:03:07] 2025-10-12 00:01:36,323 | INFO     | mean x: 1760222605.5
[2025-10-12 02:03:07] 2025-10-12 00:01:36,323 | INFO     | mean y: 2347594.603896104
[2025-10-12 02:03:07] 2025-10-12 00:01:36,324 | INFO     | -- intersect: 31710899098.19961
[2025-10-12 02:03:07] 2025-10-12 00:01:36,324 | INFO     | intersect: 31710899098.19961
[2025-10-12 02:03:07] 2025-10-12 00:01:36,324 | INFO     | chi2: 0.8067843791685991
[2025-10-12 02:03:07] 2025-10-12 00:01:36,324 | INFO     | current chi2=0.8067843791685991 (change=61.22599956523752 %)
[2025-10-12 02:03:07] 2025-10-12 00:01:36,324 | INFO     | sum of square deviations: 1025693650.0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,325 | INFO     | sum of deviations: -18705027007.0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,325 | INFO     | mean x: 1760222758.0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,325 | INFO     | mean y: 2345165.33557047
[2025-10-12 02:03:07] 2025-10-12 00:01:36,325 | INFO     | -- intersect: 32102587013.109543
[2025-10-12 02:03:07] 2025-10-12 00:01:36,325 | INFO     | intersect: 32102587013.109543
[2025-10-12 02:03:07] 2025-10-12 00:01:36,326 | INFO     | chi2: 0.8069819370678991
[2025-10-12 02:03:07] 2025-10-12 00:01:36,326 | INFO     | current chi2=0.8069819370678991 (change=-0.02448707540713275 %)
[2025-10-12 02:03:07] 2025-10-12 00:01:36,326 | INFO     | left removable region: 20
[2025-10-12 02:03:07] 2025-10-12 00:01:36,326 | INFO     | sum of square deviations: 650252192.0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,327 | INFO     | sum of deviations: -4707736854.0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,327 | INFO     | mean x: 1760222727.5
[2025-10-12 02:03:07] 2025-10-12 00:01:36,327 | INFO     | mean y: 2352639.78125
[2025-10-12 02:03:07] 2025-10-12 00:01:36,327 | INFO     | -- intersect: 12746124221.715647
[2025-10-12 02:03:07] 2025-10-12 00:01:36,327 | INFO     | intersect: 12746124221.715647
[2025-10-12 02:03:07] 2025-10-12 00:01:36,327 | INFO     | chi2: 0.018801538674414944
[2025-10-12 02:03:07] 2025-10-12 00:01:36,328 | INFO     | -- intersect: 12746124221.715647
[2025-10-12 02:03:07] 2025-10-12 00:01:36,328 | INFO     | current memory leak: -7.24 B/s (using 128 data points, chi2=0.02)
[2025-10-12 02:03:07] 2025-10-12 00:01:36,328 | INFO     | could have reported an average CPU frequency of 2698 MHz (9 samples)
[2025-10-12 02:03:07] 2025-10-12 00:01:36,328 | INFO     | ..............................
[2025-10-12 02:03:07] 2025-10-12 00:01:36,328 | INFO     | . Timing measurements:
[2025-10-12 02:03:07] 2025-10-12 00:01:36,328 | INFO     | . get job = 0 s
[2025-10-12 02:03:07] 2025-10-12 00:01:36,328 | INFO     | . initial setup = 1 s
[2025-10-12 02:03:07] 2025-10-12 00:01:36,329 | INFO     | . payload setup = 8 s
[2025-10-12 02:03:07] 2025-10-12 00:01:36,329 | INFO     | . stage-in = 0 s
[2025-10-12 02:03:07] 2025-10-12 00:01:36,329 | INFO     | . payload execution = 9656 s
[2025-10-12 02:03:07] 2025-10-12 00:01:36,329 | INFO     | . stage-out = 1 s
[2025-10-12 02:03:07] 2025-10-12 00:01:36,329 | INFO     | . log creation = 0 s
[2025-10-12 02:03:07] 2025-10-12 00:01:36,329 | INFO     | ..............................
[2025-10-12 02:03:07] 2025-10-12 00:01:36,431 | INFO     | 
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | job summary report
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | --------------------------------------------------
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | PanDA job id: 6837828138
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | task id: 46676269
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | errors: (none)
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | pilot state: finished 
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | transexitcode: 0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | exeerrorcode: 0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | exeerrordiag: 
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | exitcode: 0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | exitmsg: OK
[2025-10-12 02:03:07] 2025-10-12 00:01:36,432 | INFO     | cpuconsumptiontime: 36866 s
[2025-10-12 02:03:07] 2025-10-12 00:01:36,433 | INFO     | nevents: 400
[2025-10-12 02:03:07] 2025-10-12 00:01:36,433 | INFO     | neventsw: 0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,433 | INFO     | pid: 62036
[2025-10-12 02:03:07] 2025-10-12 00:01:36,433 | INFO     | pgrp: 62036
[2025-10-12 02:03:07] 2025-10-12 00:01:36,433 | INFO     | corecount: 4
[2025-10-12 02:03:07] 2025-10-12 00:01:36,433 | INFO     | event service: False
[2025-10-12 02:03:07] 2025-10-12 00:01:36,433 | INFO     | sizes: {0: 2348868, 7: 2349130, 11: 2349158, 9669: 2378123, 9671: 2387143, 9672: 2387199, 9679: 2387585}
[2025-10-12 02:03:07] 2025-10-12 00:01:36,433 | INFO     | --------------------------------------------------
[2025-10-12 02:03:07] 2025-10-12 00:01:36,433 | INFO     | 
[2025-10-12 02:03:07] 2025-10-12 00:01:36,433 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2025-10-12 02:03:07] 2025-10-12 00:01:36,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,467 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,467 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,467 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,468 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:03:07] 2025-10-12 00:01:36,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,468 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:03:07] 2025-10-12 00:01:36,468 | INFO     | job 6837828138 has completed (purged errors)
[2025-10-12 02:03:07] 2025-10-12 00:01:36,469 | INFO     | overall cleanup function is called
[2025-10-12 02:03:07] 2025-10-12 00:01:37,477 | INFO     | --- collectZombieJob: --- 10, [62036]
[2025-10-12 02:03:07] 2025-10-12 00:01:37,477 | INFO     | zombie collector waiting for pid 62036
[2025-10-12 02:03:07] 2025-10-12 00:01:37,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:03:07] 2025-10-12 00:01:37,478 | INFO     | collected zombie processes
[2025-10-12 02:03:07] 2025-10-12 00:01:37,478 | INFO     | will attempt to kill all subprocesses of pid=62036
[2025-10-12 02:03:07] 2025-10-12 00:01:38,273 | INFO     | process IDs to be killed: [62036] (in reverse order)
[2025-10-12 02:03:07] 2025-10-12 00:01:38,526 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:03:07] 2025-10-12 00:01:38,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:03:07] 2025-10-12 00:01:38,557 | INFO     | did not find any defunct processes belonging to 62036
[2025-10-12 02:03:07] 2025-10-12 00:01:38,586 | INFO     | did not find any defunct processes belonging to 62036
[2025-10-12 02:03:07] 2025-10-12 00:01:38,587 | INFO     | ready for new job
[2025-10-12 02:03:07] 2025-10-12 00:01:38,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:03:07] 2025-10-12 00:01:38,589 | INFO     | ***************************************
[2025-10-12 02:03:07] 2025-10-12 00:01:38,589 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:03:07] 2025-10-12 00:01:38,589 | INFO     | ***************************************
[2025-10-12 02:03:07] 2025-10-12 00:01:38,590 | INFO     | 
[2025-10-12 02:03:07] 2025-10-12 00:01:38,597 | INFO     | architecture information:
[2025-10-12 02:03:07] 2025-10-12 00:01:38,598 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:03:07] 2025-10-12 00:01:38,621 | INFO     | cat /etc/os-release:
[2025-10-12 02:03:07] NAME="CentOS Linux"
[2025-10-12 02:03:07] VERSION="7 (Core)"
[2025-10-12 02:03:07] ID="centos"
[2025-10-12 02:03:07] ID_LIKE="rhel fedora"
[2025-10-12 02:03:07] VERSION_ID="7"
[2025-10-12 02:03:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:03:07] ANSI_COLOR="0;31"
[2025-10-12 02:03:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:03:07] HOME_URL="https://www.centos.org/"
[2025-10-12 02:03:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:03:07] 
[2025-10-12 02:03:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:03:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:03:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:03:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:03:07] 
[2025-10-12 02:03:07] 2025-10-12 00:01:38,622 | INFO     | ***************************************
[2025-10-12 02:03:07] 2025-10-12 00:01:39,125 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2025-10-12 02:03:07] 2025-10-12 00:01:39,151 | INFO     | sufficient remaining disk space (3336929542144 B)
[2025-10-12 02:03:07] 2025-10-12 00:01:39,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:03:07] 2025-10-12 00:01:39,151 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:03:07] 2025-10-12 00:01:39,151 | INFO     | update_server=False
[2025-10-12 02:03:07] 2025-10-12 00:01:39,151 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:03:07] 2025-10-12 00:01:39,386 | INFO     | all data control threads have been joined
[2025-10-12 02:03:07] 2025-10-12 00:01:39,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:03:07] 2025-10-12 00:01:39,495 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 02:03:07] 2025-10-12 00:01:39,495 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 02:03:07] 2025-10-12 00:01:39,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:03:07] 2025-10-12 00:01:39,496 | INFO     | will abort loop
[2025-10-12 02:03:07] 2025-10-12 00:01:39,586 | INFO     | all job control threads have been joined
[2025-10-12 02:03:07] 2025-10-12 00:01:40,155 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:40,185 | INFO     | all payload control threads have been joined
[2025-10-12 02:03:07] 2025-10-12 00:01:40,211 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:40,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:03:07] 2025-10-12 00:01:40,389 | INFO     | [data] control thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:40,501 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:40,590 | INFO     | [job] control thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:40,590 | INFO     | [job] validate thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:40,643 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:40,790 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:40,925 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:41,123 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:41,190 | INFO     | [payload] control thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:41,273 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:41,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:03:07] 2025-10-12 00:01:41,488 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:41,533 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:42,447 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:01:44,328 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:03:07] 2025-10-12 00:02:09,476 | INFO     | PID=39244 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 02:03:07] 2025-10-12 00:02:09,476 | INFO     | .. there are 12 such processes running
[2025-10-12 02:03:07] 2025-10-12 00:02:09,476 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:03:07] 2025-10-12 00:02:09,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:03:07] 2025-10-12 00:02:09,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:03:07] 2025-10-12 00:02:14,910 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:03:07] 2025-10-12 00:02:15,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23411241150272)>', '<ExcThread(monitor, started 23411008964352)>']
[2025-10-12 02:03:07] 2025-10-12 00:02:15,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:03:07] 2025-10-12 00:02:15,506 | INFO     | [monitor] control thread has ended
[2025-10-12 02:03:07] 2025-10-12 00:02:20,254 | INFO     | all workflow threads have been joined
[2025-10-12 02:03:07] 2025-10-12 00:02:20,254 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:03:07] 2025-10-12 00:02:20,255 | INFO     | traces error code: 0
[2025-10-12 02:03:07] 2025-10-12 00:02:20,255 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:03:07] 2025-10-12 00:02:20,500 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:03:07] 2025-10-12 00:02:20,503 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:03:07] 2025-10-12 00:02:20,506 [wrapper] pilotpid: 39244
[2025-10-12 02:03:07] 2025-10-12 00:02:20,509 [wrapper] Pilot exit status: 0
[2025-10-12 02:03:07] 2025-10-12 00:02:20,521 [wrapper] pandaids: 6837828138 6837828138
[2025-10-12 02:03:07] 2025-10-12 00:02:20,695 [wrapper] cleanup supervisor_pilot  529254 39245
[2025-10-12 02:03:07] 2025-10-12 00:02:20,699 [wrapper] Test setup, not cleaning
[2025-10-12 02:03:07] 2025-10-12 00:02:20,702 [wrapper] apfmon messages muted
[2025-10-12 02:03:07] 2025-10-12 00:02:20,706 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:03:07] 2025-10-12 00:02:20,709 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:03:07]  *** Error codes and diagnostics ***
[2025-10-12 02:03:07]     "exeErrorCode": 0,
[2025-10-12 02:03:07]     "exeErrorDiag": "",
[2025-10-12 02:03:07]     "pilotErrorCode": 0,
[2025-10-12 02:03:07]     "pilotErrorDiag": "",
[2025-10-12 02:03:07]  *** Listing of results directory ***
[2025-10-12 02:03:07] total 625700
[2025-10-12 02:03:07] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc      5112 Oct 10 23:48 queuedata.json
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc    557409 Oct 10 23:48 pilot3.tar.gz
[2025-10-12 02:03:07] -rwx------ 1 boinc boinc     36292 Oct 10 23:48 runpilot2-wrapper.sh
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc       100 Oct 11 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:03:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 20:21 run_atlas
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc       105 Oct 11 20:21 job.xml
[2025-10-12 02:03:07] -rw-r--r-- 3 boinc boinc 221467572 Oct 11 20:21 EVNT.46676267._001852.pool.root.1
[2025-10-12 02:03:07] -rw-r--r-- 3 boinc boinc 221467572 Oct 11 20:21 ATLAS.root_0
[2025-10-12 02:03:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:21 start_atlas.sh
[2025-10-12 02:03:07] drwxrwx--x 2 boinc boinc      4096 Oct 11 20:21 shared
[2025-10-12 02:03:07] -rw-r--r-- 2 boinc boinc    569673 Oct 11 20:21 input.tar.gz
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc         0 Oct 11 20:21 boinc_lockfile
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc      6689 Oct 11 23:19 init_data.xml
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc      2550 Oct 11 23:19 pandaJob.out
[2025-10-12 02:03:07] -rw------- 1 boinc boinc    975528 Oct 11 23:19 agis_schedconf.cvmfs.json
[2025-10-12 02:03:07] -rw------- 1 boinc boinc 190486647 Oct 12 02:00 HITS.46676269._045812.pool.root.1
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc       529 Oct 12 02:00 boinc_task_state.xml
[2025-10-12 02:03:07] -rw------- 1 boinc boinc      1027 Oct 12 02:01 memory_monitor_summary.json
[2025-10-12 02:03:07] -rw------- 1 boinc boinc   1560580 Oct 12 02:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:03:07] -rw------- 1 boinc boinc    331974 Oct 12 02:01 log.46676269._045812.job.log.tgz.1
[2025-10-12 02:03:07] -rw------- 1 boinc boinc        97 Oct 12 02:01 pilot_heartbeat.json
[2025-10-12 02:03:07] -rw------- 1 boinc boinc      7779 Oct 12 02:01 heartbeat.json
[2025-10-12 02:03:07] -rw------- 1 boinc boinc      5019 Oct 12 02:02 pilotlog.txt
[2025-10-12 02:03:07] -rw------- 1 boinc boinc   1354958 Oct 12 02:02 log.46676269._045812.job.log.1
[2025-10-12 02:03:07] -rw------- 1 boinc boinc       357 Oct 12 02:02 output.list
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc       620 Oct 12 02:02 runtime_log
[2025-10-12 02:03:07] -rw------- 1 boinc boinc   1710080 Oct 12 02:02 result.tar.gz
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc      9146 Oct 12 02:02 runtime_log.err
[2025-10-12 02:03:07] -rw------- 1 boinc boinc       788 Oct 12 02:02 n5mLDmk9ZR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFfQMDmrrBIXo.diag
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc        26 Oct 12 02:03 wrapper_checkpoint.txt
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc      8192 Oct 12 02:03 boinc_mmap_file
[2025-10-12 02:03:07] -rw-r--r-- 1 boinc boinc     22576 Oct 12 02:03 stderr.txt
[2025-10-12 02:03:07] HITS file was successfully produced:
[2025-10-12 02:03:07] -rw------- 1 boinc boinc 190486647 Oct 12 02:00 shared/HITS.pool.root.1
[2025-10-12 02:03:07]  *** Contents of shared directory: ***
[2025-10-12 02:03:07] total 404560
[2025-10-12 02:03:07] -rw-r--r-- 3 boinc boinc 221467572 Oct 11 20:21 ATLAS.root_0
[2025-10-12 02:03:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:21 start_atlas.sh
[2025-10-12 02:03:07] -rw-r--r-- 2 boinc boinc    569673 Oct 11 20:21 input.tar.gz
[2025-10-12 02:03:07] -rw------- 1 boinc boinc 190486647 Oct 12 02:00 HITS.pool.root.1
[2025-10-12 02:03:07] -rw------- 1 boinc boinc   1710080 Oct 12 02:02 result.tar.gz
02:03:08 (35122): run_atlas exited; CPU time 37442.194869
02:03:08 (35122): called boinc_finish(0)

</stderr_txt>
]]>

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