Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:40:31 (1665517): wrapper (7.7.26015): starting
21:40:31 (1665517): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 21:40:32] Arguments: --nthreads 4
[2025-10-11 21:40:32] Threads: 4
[2025-10-11 21:40:32] Checking for CVMFS
[2025-10-11 21:40:32] No cvmfs_config command found, will try listing directly
[2025-10-11 21:40:32] CVMFS is ok
[2025-10-11 21:40:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:40:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:40:32] Further information can be found at the LHC@home message board.
[2025-10-11 21:40:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:40:32] Checking for apptainer binary...
[2025-10-11 21:40:32] which: no apptainer in ((null))
[2025-10-11 21:40:32] apptainer is not installed, using version from CVMFS
[2025-10-11 21:40:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:40:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-10-11 21:40:32] apptainer works
[2025-10-11 21:40:32] Set ATHENA_PROC_NUMBER=4
[2025-10-11 21:40:32] Set ATHENA_CORE_NUMBER=4
[2025-10-11 21:40:32] Starting ATLAS job with PandaID=6837706990
[2025-10-11 21:40:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:12:48 (1878376): wrapper (7.7.26015): starting
23:12:48 (1878376): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 23:12:48] Arguments: --nthreads 4
[2025-10-11 23:12:48] Threads: 4
[2025-10-11 23:12:48] This job has been restarted, cleaning up previous attempt
[2025-10-11 23:12:48] Checking for CVMFS
[2025-10-11 23:12:48] No cvmfs_config command found, will try listing directly
[2025-10-11 23:12:48] CVMFS is ok
[2025-10-11 23:12:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:12:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:12:48] Further information can be found at the LHC@home message board.
[2025-10-11 23:12:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:12:48] Checking for apptainer binary...
[2025-10-11 23:12:48] which: no apptainer in ((null))
[2025-10-11 23:12:48] apptainer is not installed, using version from CVMFS
[2025-10-11 23:12:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:12:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-10-11 23:12:48] apptainer works
[2025-10-11 23:12:48] Set ATHENA_PROC_NUMBER=4
[2025-10-11 23:12:48] Set ATHENA_CORE_NUMBER=4
[2025-10-11 23:12:48] Starting ATLAS job with PandaID=6837706990
[2025-10-11 23:12:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:51:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:51:27] 2025-10-12 00:30:50,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 02:51:27] 2025-10-12 00:30:50,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 02:51:27] 2025-10-12 00:30:50,442 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:51:27] 2025-10-12 00:30:50,443 | INFO     | sum of square deviations: 2299168690.0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,444 | INFO     | sum of deviations: 258911510.9999962
[2025-10-12 02:51:27] 2025-10-12 00:30:50,444 | INFO     | mean x: 1760223121.0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,444 | INFO     | mean y: 2315406.717948718
[2025-10-12 02:51:27] 2025-10-12 00:30:50,444 | INFO     | -- intersect: -195904945.68048236
[2025-10-12 02:51:27] 2025-10-12 00:30:50,444 | INFO     | intersect: -195904945.68048236
[2025-10-12 02:51:27] 2025-10-12 00:30:50,445 | INFO     | chi2: 2.4218195813020924
[2025-10-12 02:51:27] 2025-10-12 00:30:50,445 | INFO     | sum of square deviations: 2126802667.5
[2025-10-12 02:51:27] 2025-10-12 00:30:50,446 | INFO     | sum of deviations: 13892734719.5
[2025-10-12 02:51:27] 2025-10-12 00:30:50,447 | INFO     | mean x: 1760222968.5
[2025-10-12 02:51:27] 2025-10-12 00:30:50,447 | INFO     | mean y: 2327219.889473684
[2025-10-12 02:51:27] 2025-10-12 00:30:50,447 | INFO     | -- intersect: -11495829671.782427
[2025-10-12 02:51:27] 2025-10-12 00:30:50,447 | INFO     | intersect: -11495829671.782427
[2025-10-12 02:51:27] 2025-10-12 00:30:50,447 | INFO     | chi2: 1.429638607697154
[2025-10-12 02:51:27] 2025-10-12 00:30:50,447 | INFO     | current chi2=1.429638607697154 (change=40.96840992058921 %)
[2025-10-12 02:51:27] 2025-10-12 00:30:50,448 | INFO     | sum of square deviations: 1963274020.0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,449 | INFO     | sum of deviations: 13729595740.0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,449 | INFO     | mean x: 1760222816.0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,449 | INFO     | mean y: 2327067.8540540542
[2025-10-12 02:51:27] 2025-10-12 00:30:50,449 | INFO     | -- intersect: -12307288110.573462
[2025-10-12 02:51:27] 2025-10-12 00:30:50,449 | INFO     | intersect: -12307288110.573462
[2025-10-12 02:51:27] 2025-10-12 00:30:50,450 | INFO     | chi2: 1.4306453493257485
[2025-10-12 02:51:27] 2025-10-12 00:30:50,450 | INFO     | current chi2=1.4306453493257485 (change=-0.0704193089900004 %)
[2025-10-12 02:51:27] 2025-10-12 00:30:50,450 | INFO     | right removable region: 184
[2025-10-12 02:51:27] 2025-10-12 00:30:50,450 | INFO     | sum of square deviations: 2126802667.5
[2025-10-12 02:51:27] 2025-10-12 00:30:50,451 | INFO     | sum of deviations: -26665481684.0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,452 | INFO     | mean x: 1760223273.5
[2025-10-12 02:51:27] 2025-10-12 00:30:50,452 | INFO     | mean y: 2338949.6315789474
[2025-10-12 02:51:27] 2025-10-12 00:30:50,452 | INFO     | -- intersect: 22071711993.270935
[2025-10-12 02:51:27] 2025-10-12 00:30:50,452 | INFO     | intersect: 22071711993.270935
[2025-10-12 02:51:27] 2025-10-12 00:30:50,452 | INFO     | chi2: 1.0503672709180494
[2025-10-12 02:51:27] 2025-10-12 00:30:50,452 | INFO     | current chi2=1.0503672709180494 (change=56.62900411626374 %)
[2025-10-12 02:51:27] 2025-10-12 00:30:50,453 | INFO     | sum of square deviations: 1963274020.0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,454 | INFO     | sum of deviations: -27519371274.0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,454 | INFO     | mean x: 1760223426.0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,454 | INFO     | mean y: 2339721.8054054054
[2025-10-12 02:51:27] 2025-10-12 00:30:50,454 | INFO     | -- intersect: 24675534340.499672
[2025-10-12 02:51:27] 2025-10-12 00:30:50,454 | INFO     | intersect: 24675534340.499672
[2025-10-12 02:51:27] 2025-10-12 00:30:50,455 | INFO     | chi2: 1.0416415607922045
[2025-10-12 02:51:27] 2025-10-12 00:30:50,455 | INFO     | current chi2=1.0416415607922045 (change=0.8307294379249252 %)
[2025-10-12 02:51:27] 2025-10-12 00:30:50,455 | INFO     | left removable region: 20
[2025-10-12 02:51:27] 2025-10-12 00:30:50,455 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,456 | INFO     | sum of deviations: -11103199260.000002
[2025-10-12 02:51:27] 2025-10-12 00:30:50,456 | INFO     | mean x: 1760223395.5
[2025-10-12 02:51:27] 2025-10-12 00:30:50,456 | INFO     | mean y: 2351109.2560975607
[2025-10-12 02:51:27] 2025-10-12 00:30:50,456 | INFO     | -- intersect: 14292017907.253265
[2025-10-12 02:51:27] 2025-10-12 00:30:50,456 | INFO     | intersect: 14292017907.253265
[2025-10-12 02:51:27] 2025-10-12 00:30:50,457 | INFO     | chi2: 0.018639871049143605
[2025-10-12 02:51:27] 2025-10-12 00:30:50,457 | INFO     | -- intersect: 14292017907.253265
[2025-10-12 02:51:27] 2025-10-12 00:30:50,457 | INFO     | current memory leak: -8.12 B/s (using 164 data points, chi2=0.02)
[2025-10-12 02:51:27] 2025-10-12 00:30:50,458 | INFO     | could have reported an average CPU frequency of 2599 MHz (10 samples)
[2025-10-12 02:51:27] 2025-10-12 00:30:50,458 | INFO     | ..............................
[2025-10-12 02:51:27] 2025-10-12 00:30:50,458 | INFO     | . Timing measurements:
[2025-10-12 02:51:27] 2025-10-12 00:30:50,458 | INFO     | . get job = 0 s
[2025-10-12 02:51:27] 2025-10-12 00:30:50,458 | INFO     | . initial setup = 1 s
[2025-10-12 02:51:27] 2025-10-12 00:30:50,458 | INFO     | . payload setup = 5 s
[2025-10-12 02:51:27] 2025-10-12 00:30:50,458 | INFO     | . stage-in = 0 s
[2025-10-12 02:51:27] 2025-10-12 00:30:50,458 | INFO     | . payload execution = 11839 s
[2025-10-12 02:51:27] 2025-10-12 00:30:50,458 | INFO     | . stage-out = 1 s
[2025-10-12 02:51:27] 2025-10-12 00:30:50,459 | INFO     | . log creation = 0 s
[2025-10-12 02:51:27] 2025-10-12 00:30:50,459 | INFO     | ..............................
[2025-10-12 02:51:27] 2025-10-12 00:30:50,566 | INFO     | 
[2025-10-12 02:51:27] 2025-10-12 00:30:50,567 | INFO     | job summary report
[2025-10-12 02:51:27] 2025-10-12 00:30:50,567 | INFO     | --------------------------------------------------
[2025-10-12 02:51:27] 2025-10-12 00:30:50,567 | INFO     | PanDA job id: 6837706990
[2025-10-12 02:51:27] 2025-10-12 00:30:50,567 | INFO     | task id: 46676269
[2025-10-12 02:51:27] 2025-10-12 00:30:50,567 | INFO     | errors: (none)
[2025-10-12 02:51:27] 2025-10-12 00:30:50,567 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:51:27] 2025-10-12 00:30:50,567 | INFO     | pilot state: finished 
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | transexitcode: 0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | exeerrorcode: 0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | exeerrordiag: 
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | exitcode: 0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | exitmsg: OK
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | cpuconsumptiontime: 45299 s
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | nevents: 400
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | neventsw: 0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | pid: 1896391
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | pgrp: 1896391
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | corecount: 4
[2025-10-12 02:51:27] 2025-10-12 00:30:50,568 | INFO     | event service: False
[2025-10-12 02:51:27] 2025-10-12 00:30:50,569 | INFO     | sizes: {0: 2348696, 1: 2348895, 5: 2349157, 12: 2349213, 11848: 2378743, 11851: 2387763, 11852: 2387947, 11857: 2388141}
[2025-10-12 02:51:27] 2025-10-12 00:30:50,569 | INFO     | --------------------------------------------------
[2025-10-12 02:51:27] 2025-10-12 00:30:50,569 | INFO     | 
[2025-10-12 02:51:27] 2025-10-12 00:30:50,569 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-12 02:51:27] 2025-10-12 00:30:50,591 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,591 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,591 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,593 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:51:27] 2025-10-12 00:30:50,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,593 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:51:27] 2025-10-12 00:30:50,593 | INFO     | job 6837706990 has completed (purged errors)
[2025-10-12 02:51:27] 2025-10-12 00:30:50,593 | INFO     | overall cleanup function is called
[2025-10-12 02:51:27] 2025-10-12 00:30:51,601 | INFO     | --- collectZombieJob: --- 10, [1896391]
[2025-10-12 02:51:27] 2025-10-12 00:30:51,601 | INFO     | zombie collector waiting for pid 1896391
[2025-10-12 02:51:27] 2025-10-12 00:30:51,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:51:27] 2025-10-12 00:30:51,602 | INFO     | collected zombie processes
[2025-10-12 02:51:27] 2025-10-12 00:30:51,602 | INFO     | will attempt to kill all subprocesses of pid=1896391
[2025-10-12 02:51:27] 2025-10-12 00:30:51,975 | INFO     | process IDs to be killed: [1896391] (in reverse order)
[2025-10-12 02:51:27] 2025-10-12 00:30:52,090 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:51:27] 2025-10-12 00:30:52,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:51:27] 2025-10-12 00:30:52,104 | INFO     | did not find any defunct processes belonging to 1896391
[2025-10-12 02:51:27] 2025-10-12 00:30:52,118 | INFO     | did not find any defunct processes belonging to 1896391
[2025-10-12 02:51:27] 2025-10-12 00:30:52,118 | INFO     | ready for new job
[2025-10-12 02:51:27] 2025-10-12 00:30:52,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:51:27] 2025-10-12 00:30:52,123 | INFO     | ***************************************
[2025-10-12 02:51:27] 2025-10-12 00:30:52,125 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:51:27] 2025-10-12 00:30:52,125 | INFO     | ***************************************
[2025-10-12 02:51:27] 2025-10-12 00:30:52,125 | INFO     | 
[2025-10-12 02:51:27] 2025-10-12 00:30:52,130 | INFO     | architecture information:
[2025-10-12 02:51:27] 2025-10-12 00:30:52,131 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:51:27] 2025-10-12 00:30:52,149 | INFO     | cat /etc/os-release:
[2025-10-12 02:51:27] NAME="CentOS Linux"
[2025-10-12 02:51:27] VERSION="7 (Core)"
[2025-10-12 02:51:27] ID="centos"
[2025-10-12 02:51:27] ID_LIKE="rhel fedora"
[2025-10-12 02:51:27] VERSION_ID="7"
[2025-10-12 02:51:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:51:27] ANSI_COLOR="0;31"
[2025-10-12 02:51:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:51:27] HOME_URL="https://www.centos.org/"
[2025-10-12 02:51:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:51:27] 
[2025-10-12 02:51:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:51:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:51:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:51:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:51:27] 
[2025-10-12 02:51:27] 2025-10-12 00:30:52,150 | INFO     | ***************************************
[2025-10-12 02:51:27] 2025-10-12 00:30:52,652 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-12 02:51:27] 2025-10-12 00:30:52,669 | INFO     | sufficient remaining disk space (693611003904 B)
[2025-10-12 02:51:27] 2025-10-12 00:30:52,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:51:27] 2025-10-12 00:30:52,670 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:51:27] 2025-10-12 00:30:52,670 | INFO     | update_server=False
[2025-10-12 02:51:27] 2025-10-12 00:30:52,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:51:27] 2025-10-12 00:30:52,671 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:51:27] 2025-10-12 00:30:53,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:51:27] 2025-10-12 00:30:53,474 | INFO     | aborting loop
[2025-10-12 02:51:27] 2025-10-12 00:30:53,478 | INFO     | all job control threads have been joined
[2025-10-12 02:51:27] 2025-10-12 00:30:53,479 | INFO     | all data control threads have been joined
[2025-10-12 02:51:27] 2025-10-12 00:30:53,549 | INFO     | all payload control threads have been joined
[2025-10-12 02:51:27] 2025-10-12 00:30:53,671 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:53,701 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:53,809 | INFO     | [job] validate thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:53,823 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:54,121 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:54,332 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:54,381 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:54,478 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:54,483 | INFO     | [job] control thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:54,484 | INFO     | [data] control thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:54,554 | INFO     | [payload] control thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:54,677 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:55,028 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:55,576 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:51:27] 2025-10-12 00:30:55,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:51:27] 2025-10-12 00:30:56,582 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:30:59,942 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:31:03,249 | INFO     | job.realtimelogging is not enabled
[2025-10-12 02:51:27] 2025-10-12 00:31:04,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:51:27] 2025-10-12 00:31:16,925 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:51:27] 2025-10-12 00:31:17,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22759739455296)>', '<ExcThread(monitor, started 22759505626880)>']
[2025-10-12 02:51:27] 2025-10-12 00:31:22,753 | INFO     | all workflow threads have been joined
[2025-10-12 02:51:27] 2025-10-12 00:31:22,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:51:27] 2025-10-12 00:31:22,754 | INFO     | traces error code: 0
[2025-10-12 02:51:27] 2025-10-12 00:31:22,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:51:27] 2025-10-12 00:31:23,405 | INFO     | PID=1884998 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 02:51:27] 2025-10-12 00:31:23,406 | INFO     | .. there are 6 such processes running
[2025-10-12 02:51:27] 2025-10-12 00:31:23,406 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:51:27] 2025-10-12 00:31:23,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:51:27] 2025-10-12 00:31:23,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:51:27] 2025-10-12 00:31:23,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:51:27] 2025-10-12 00:31:23,407 | INFO     | [monitor] control thread has ended
[2025-10-12 02:51:27] 2025-10-12 00:31:23,544 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:51:27] 2025-10-12 00:31:23,546 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:51:27] 2025-10-12 00:31:23,549 [wrapper] pilotpid: 1884998
[2025-10-12 02:51:27] 2025-10-12 00:31:23,552 [wrapper] Pilot exit status: 0
[2025-10-12 02:51:27] 2025-10-12 00:31:23,563 [wrapper] pandaids: 6837706990 6837706990
[2025-10-12 02:51:27] 2025-10-12 00:31:23,614 [wrapper] cleanup supervisor_pilot 2180806 1885000
[2025-10-12 02:51:27] 2025-10-12 00:31:23,616 [wrapper] Test setup, not cleaning
[2025-10-12 02:51:27] 2025-10-12 00:31:23,619 [wrapper] apfmon messages muted
[2025-10-12 02:51:27] 2025-10-12 00:31:23,621 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:51:27] 2025-10-12 00:31:23,623 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:51:27]  *** Error codes and diagnostics ***
[2025-10-12 02:51:27]     "exeErrorCode": 0,
[2025-10-12 02:51:27]     "exeErrorDiag": "",
[2025-10-12 02:51:27]     "pilotErrorCode": 0,
[2025-10-12 02:51:27]     "pilotErrorDiag": "",
[2025-10-12 02:51:27]  *** Listing of results directory ***
[2025-10-12 02:51:27] total 633664
[2025-10-12 02:51:27] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc    557409 Oct 10 20:18 pilot3.tar.gz
[2025-10-12 02:51:27] -rwx------ 1 boinc boinc     36292 Oct 10 20:27 runpilot2-wrapper.sh
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc      5112 Oct 10 20:27 queuedata.json
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc       100 Oct 11 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:51:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 21:40 run_atlas
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc       105 Oct 11 21:40 job.xml
[2025-10-12 02:51:27] -rw-r--r-- 3 boinc boinc 221369541 Oct 11 21:40 EVNT.46676267._001751.pool.root.1
[2025-10-12 02:51:27] -rw-r--r-- 3 boinc boinc 221369541 Oct 11 21:40 ATLAS.root_0
[2025-10-12 02:51:27] -rw-r--r-- 2 boinc boinc     15120 Oct 11 21:40 start_atlas.sh
[2025-10-12 02:51:27] drwxrwx--x 2 boinc boinc      4096 Oct 11 21:40 shared
[2025-10-12 02:51:27] -rw-r--r-- 2 boinc boinc    569676 Oct 11 21:40 input.tar.gz
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc         0 Oct 11 21:40 boinc_lockfile
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc      6639 Oct 11 23:12 init_data.xml
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc      2549 Oct 11 23:12 pandaJob.out
[2025-10-12 02:51:27] -rw------- 1 boinc boinc    975528 Oct 11 23:12 agis_schedconf.cvmfs.json
[2025-10-12 02:51:27] -rw------- 1 boinc boinc 198097287 Oct 12 02:30 HITS.46676269._043255.pool.root.1
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc       528 Oct 12 02:30 boinc_task_state.xml
[2025-10-12 02:51:27] -rw------- 1 boinc boinc      1033 Oct 12 02:30 memory_monitor_summary.json
[2025-10-12 02:51:27] -rw------- 1 boinc boinc   1560580 Oct 12 02:30 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:51:27] -rw------- 1 boinc boinc    378481 Oct 12 02:30 log.46676269._043255.job.log.tgz.1
[2025-10-12 02:51:27] -rw------- 1 boinc boinc      7834 Oct 12 02:30 heartbeat.json
[2025-10-12 02:51:27] -rw------- 1 boinc boinc       822 Oct 12 02:31 pilotlog.txt
[2025-10-12 02:51:27] -rw------- 1 boinc boinc        97 Oct 12 02:31 pilot_heartbeat.json
[2025-10-12 02:51:27] -rw------- 1 boinc boinc   1685298 Oct 12 02:31 log.46676269._043255.job.log.1
[2025-10-12 02:51:27] -rw------- 1 boinc boinc       357 Oct 12 02:31 output.list
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc       620 Oct 12 02:31 runtime_log
[2025-10-12 02:51:27] -rw------- 1 boinc boinc   2078720 Oct 12 02:31 result.tar.gz
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc      9147 Oct 12 02:31 runtime_log.err
[2025-10-12 02:51:27] -rw------- 1 boinc boinc       790 Oct 12 02:31 CGcLDmx0WR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmgPQMDmcOqj1m.diag
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc        26 Oct 12 02:51 wrapper_checkpoint.txt
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc      8192 Oct 12 02:51 boinc_mmap_file
[2025-10-12 02:51:27] -rw-r--r-- 1 boinc boinc     22592 Oct 12 02:51 stderr.txt
[2025-10-12 02:51:27] HITS file was successfully produced:
[2025-10-12 02:51:27] -rw------- 1 boinc boinc 198097287 Oct 12 02:30 shared/HITS.pool.root.1
[2025-10-12 02:51:27]  *** Contents of shared directory: ***
[2025-10-12 02:51:27] total 412256
[2025-10-12 02:51:27] -rw-r--r-- 3 boinc boinc 221369541 Oct 11 21:40 ATLAS.root_0
[2025-10-12 02:51:27] -rw-r--r-- 2 boinc boinc     15120 Oct 11 21:40 start_atlas.sh
[2025-10-12 02:51:27] -rw-r--r-- 2 boinc boinc    569676 Oct 11 21:40 input.tar.gz
[2025-10-12 02:51:27] -rw------- 1 boinc boinc 198097287 Oct 12 02:30 HITS.pool.root.1
[2025-10-12 02:51:27] -rw------- 1 boinc boinc   2078720 Oct 12 02:31 result.tar.gz
02:51:29 (1878376): run_atlas exited; CPU time 45790.919100
02:51:29 (1878376): called boinc_finish(0)

</stderr_txt>
]]>

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