Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:26:37 (945385): wrapper (7.7.26015): starting
17:26:37 (945385): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 17:26:38] Arguments: --nthreads 8
[2025-10-10 17:26:38] Threads: 8
[2025-10-10 17:26:38] Checking for CVMFS
[2025-10-10 17:26:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 17:26:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 17:26:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 17:26:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 17:26:39] 2.11.3.0 2062 28965 184208 151566 1 195 32770187 45568000 17907 130560 0 186560437 99.862 82646154 27444 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 17:26:39] CVMFS is ok
[2025-10-10 17:26:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 17:26:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 17:26:39] Further information can be found at the LHC@home message board.
[2025-10-10 17:26:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 17:26:39] Checking for apptainer binary...
[2025-10-10 17:26:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 17:26:39] Running /usr/bin/apptainer --version
[2025-10-10 17:26:39] apptainer version 1.4.1-1.el9
[2025-10-10 17:26:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 17:26:40] wns0024.triumf.lcg
[2025-10-10 17:26:40] apptainer works
[2025-10-10 17:26:40] Set ATHENA_PROC_NUMBER=8
[2025-10-10 17:26:40] Set ATHENA_CORE_NUMBER=8
[2025-10-10 17:26:40] Starting ATLAS job with PandaID=6837786099
[2025-10-10 17:26:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 17:33:43]  *** The last 200 lines of the pilot log: ***
[2025-10-10 17:33:43] 2025-10-11 00:33:08,931 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | ..............................
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . Timing measurements:
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . get job = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . initial setup = 5 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . payload setup = 35 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . stage-in = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . payload execution = 104 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . stage-out = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . log creation = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | ..............................
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 17:33:43] 2025-10-11 00:33:08,933 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837786099/pilotlog.txt
[2025-10-10 17:33:43] 2025-10-11 00:33:08,959 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 17:33:43] - Log from pilotlog.txt -
[2025-10-10 17:33:43] 2025-10-11 00:33:08,926 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837786099/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 17:33:43] 2025-10-11 00:33:08,930 | INFO     | extracted standard info from prmon json
[2025-10-10 17:33:43] 2025-10-11 00:33:08,930 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 17:33:43] 2025-10-11 00:33:08,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 17:33:43] 2025-10-11 00:33:08,931 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 17:33:43] 2025-10-11 00:33:08,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 17:33:43] 2025-10-11 00:33:08,931 | WARNING  | wrong length of table data, x=[1760142562.0, 1760142623.0], y=[1996.0, 580980.0] (must be same and length>=4)
[2025-10-10 17:33:43] 2025-10-11 00:33:08,931 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | ..............................
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . Timing measurements:
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . get job = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . initial setup = 5 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . payload setup = 35 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . stage-in = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . payload execution = 104 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . stage-out = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . log creation = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | ..............................
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 17:33:43] 2025-10-11 00:33:08,933 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837786099/pilotlog.txt
[2025-10-10 17:33:43] 2025-10-11 00:33:08,960 | WARNING  | 
[2025-10-10 17:33:43] [begin log extracts]
[2025-10-10 17:33:43] - Log from pilotlog.txt -
[2025-10-10 17:33:43] 2025-10-11 00:33:08,926 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837786099/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 17:33:43] 2025-10-11 00:33:08,930 | INFO     | extracted standard info from prmon json
[2025-10-10 17:33:43] 2025-10-11 00:33:08,930 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 17:33:43] 2025-10-11 00:33:08,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 17:33:43] 2025-10-11 00:33:08,931 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 17:33:43] 2025-10-11 00:33:08,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 17:33:43] 2025-10-11 00:33:08,931 | WARNING  | wrong length of table data, x=[1760142562.0, 1760142623.0], y=[1996.0, 580980.0] (must be same and length>=4)
[2025-10-10 17:33:43] 2025-10-11 00:33:08,931 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | ..............................
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . Timing measurements:
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . get job = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . initial setup = 5 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . payload setup = 35 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . stage-in = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . payload execution = 104 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . stage-out = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | . log creation = 0 s
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | ..............................
[2025-10-10 17:33:43] 2025-10-11 00:33:08,932 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 17:33:43] 2025-10-11 00:33:08,933 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837786099/pilotlog.txt
[2025-10-10 17:33:43] [end log extracts]
[2025-10-10 17:33:43] 2025-10-11 00:33:08,960 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 17:33:43] 2025-10-11 00:33:08,960 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 17:33:43] 2025-10-11 00:33:09,500 | INFO     | 
[2025-10-10 17:33:43] 2025-10-11 00:33:09,500 | INFO     | job summary report
[2025-10-10 17:33:43] 2025-10-11 00:33:09,500 | INFO     | --------------------------------------------------
[2025-10-10 17:33:43] 2025-10-11 00:33:09,500 | INFO     | PanDA job id: 6837786099
[2025-10-10 17:33:43] 2025-10-11 00:33:09,500 | INFO     | task id: 46676269
[2025-10-10 17:33:43] 2025-10-11 00:33:09,500 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 17:30:33,466 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | pilot state: failed 
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | transexitcode: 65
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | exeerrorcode: 65
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | exitcode: 65
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | cpuconsumptiontime: 20 s
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | nevents: 0
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | neventsw: 0
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | pid: 956362
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | pgrp: 956362
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | corecount: 8
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | event service: False
[2025-10-10 17:33:43] 2025-10-11 00:33:09,501 | INFO     | sizes: {0: 2348682, 1: 2348881, 12: 2348881, 23: 2348909, 26: 2349199, 34: 2349227, 144: 2372664, 145: 2376956, 147: 2376984, 288: 2377150}
[2025-10-10 17:33:43] 2025-10-11 00:33:09,502 | INFO     | --------------------------------------------------
[2025-10-10 17:33:43] 2025-10-11 00:33:09,502 | INFO     | 
[2025-10-10 17:33:43] 2025-10-11 00:33:09,502 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 17:33:43] 2025-10-11 00:33:09,518 | INFO     | PID=949158 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 17:33:43] 2025-10-11 00:33:09,518 | INFO     | .. there are 33 such processes running
[2025-10-10 17:33:43] 2025-10-11 00:33:09,642 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,644 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 17:33:43] 2025-10-11 00:33:09,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,644 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 17:33:43] 2025-10-11 00:33:09,644 | INFO     | job 6837786099 has completed (purged errors)
[2025-10-10 17:33:43] 2025-10-11 00:33:09,644 | INFO     | overall cleanup function is called
[2025-10-10 17:33:43] 2025-10-11 00:33:10,655 | INFO     | --- collectZombieJob: --- 10, [956362]
[2025-10-10 17:33:43] 2025-10-11 00:33:10,655 | INFO     | zombie collector waiting for pid 956362
[2025-10-10 17:33:43] 2025-10-11 00:33:10,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 17:33:43] 2025-10-11 00:33:10,655 | INFO     | collected zombie processes
[2025-10-10 17:33:43] 2025-10-11 00:33:10,655 | INFO     | will attempt to kill all subprocesses of pid=956362
[2025-10-10 17:33:43] 2025-10-11 00:33:11,068 | INFO     | process IDs to be killed: [956362] (in reverse order)
[2025-10-10 17:33:43] 2025-10-11 00:33:11,457 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 17:33:43] 2025-10-11 00:33:11,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 17:33:43] 2025-10-11 00:33:11,477 | INFO     | did not find any defunct processes belonging to 956362
[2025-10-10 17:33:43] 2025-10-11 00:33:11,490 | INFO     | did not find any defunct processes belonging to 956362
[2025-10-10 17:33:43] 2025-10-11 00:33:11,490 | INFO     | ready for new job
[2025-10-10 17:33:43] 2025-10-11 00:33:11,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 17:33:43] 2025-10-11 00:33:11,495 | INFO     | ***************************************
[2025-10-10 17:33:43] 2025-10-11 00:33:11,495 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 17:33:43] 2025-10-11 00:33:11,495 | INFO     | ***************************************
[2025-10-10 17:33:43] 2025-10-11 00:33:11,495 | INFO     | 
[2025-10-10 17:33:43] 2025-10-11 00:33:11,497 | INFO     | architecture information:
[2025-10-10 17:33:43] 2025-10-11 00:33:11,504 | INFO     | executing command: cat /etc/os-release
[2025-10-10 17:33:43] 2025-10-11 00:33:11,564 | INFO     | cat /etc/os-release:
[2025-10-10 17:33:43] NAME="CentOS Linux"
[2025-10-10 17:33:43] VERSION="7 (Core)"
[2025-10-10 17:33:43] ID="centos"
[2025-10-10 17:33:43] ID_LIKE="rhel fedora"
[2025-10-10 17:33:43] VERSION_ID="7"
[2025-10-10 17:33:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 17:33:43] ANSI_COLOR="0;31"
[2025-10-10 17:33:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 17:33:43] HOME_URL="https://www.centos.org/"
[2025-10-10 17:33:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 17:33:43] 
[2025-10-10 17:33:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 17:33:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 17:33:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 17:33:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 17:33:43] 
[2025-10-10 17:33:43] 2025-10-11 00:33:11,564 | INFO     | ***************************************
[2025-10-10 17:33:43] 2025-10-11 00:33:12,071 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 17:33:43] 2025-10-11 00:33:12,109 | INFO     | sufficient remaining disk space (1034421272576 B)
[2025-10-10 17:33:43] 2025-10-11 00:33:12,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 17:33:43] 2025-10-11 00:33:12,110 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 17:33:43] 2025-10-11 00:33:12,110 | INFO     | update_server=False
[2025-10-10 17:33:43] 2025-10-11 00:33:12,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 17:33:43] 2025-10-11 00:33:12,347 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 17:33:43] 2025-10-11 00:33:12,347 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 17:33:43] 2025-10-11 00:33:12,347 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 17:33:43] 2025-10-11 00:33:12,347 | INFO     | will abort loop
[2025-10-10 17:33:43] 2025-10-11 00:33:12,363 | INFO     | all job control threads have been joined
[2025-10-10 17:33:43] 2025-10-11 00:33:12,525 | INFO     | all data control threads have been joined
[2025-10-10 17:33:43] 2025-10-11 00:33:12,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 17:33:43] 2025-10-11 00:33:13,071 | INFO     | all payload control threads have been joined
[2025-10-10 17:33:43] 2025-10-11 00:33:13,116 | INFO     | [job] retrieve thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:13,313 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:13,353 | INFO     | [job] job monitor thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:13,369 | INFO     | [job] control thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:13,533 | INFO     | [data] control thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:13,534 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:13,702 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:13,928 | INFO     | [payload] validate_post thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:13,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 17:33:43] 2025-10-11 00:33:14,077 | INFO     | [payload] control thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:14,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 17:33:43] 2025-10-11 00:33:14,241 | INFO     | [data] copytool_in thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:14,268 | INFO     | [job] validate thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:14,340 | INFO     | [payload] failed_post thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:14,555 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:14,803 | INFO     | [data] copytool_out thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:15,184 | INFO     | [job] queue monitor thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:17,965 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 17:33:43] 2025-10-11 00:33:26,242 | INFO     | [monitor] cgroup control has ended
[2025-10-10 17:33:43] 2025-10-11 00:33:27,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140519250458432)>', '<ExcThread(monitor, started 140518545667840)>']
[2025-10-10 17:33:43] 2025-10-11 00:33:32,649 | INFO     | all workflow threads have been joined
[2025-10-10 17:33:43] 2025-10-11 00:33:32,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 17:33:43] 2025-10-11 00:33:32,650 | INFO     | traces error code: 0
[2025-10-10 17:33:43] 2025-10-11 00:33:32,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 17:33:43] 2025-10-11 00:33:42,047 | INFO     | PID=949158 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 17:33:43] 2025-10-11 00:33:42,048 | INFO     | .. there are 33 such processes running
[2025-10-10 17:33:43] 2025-10-11 00:33:42,048 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 17:33:43] 2025-10-11 00:33:42,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 17:33:43] 2025-10-11 00:33:42,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 17:33:43] 2025-10-11 00:33:42,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 17:33:43] 2025-10-11 00:33:42,049 | INFO     | [monitor] control thread has ended
[2025-10-10 17:33:43] 2025-10-11 00:33:42,324 [wrapper] ==== pilot stdout END ====
[2025-10-10 17:33:43] 2025-10-11 00:33:42,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 17:33:43] 2025-10-11 00:33:42,334 [wrapper] pilotpid: 949158
[2025-10-10 17:33:43] 2025-10-11 00:33:42,346 [wrapper] Pilot exit status: 0
[2025-10-10 17:33:43] 2025-10-11 00:33:42,488 [wrapper] pandaids: 6837786099
[2025-10-10 17:33:43] 2025-10-11 00:33:42,603 [wrapper] cleanup supervisor_pilot  949164 949159
[2025-10-10 17:33:43] 2025-10-11 00:33:42,627 [wrapper] Test setup, not cleaning
[2025-10-10 17:33:43] 2025-10-11 00:33:42,653 [wrapper] apfmon messages muted
[2025-10-10 17:33:43] 2025-10-11 00:33:42,677 [wrapper] ==== wrapper stdout END ====
[2025-10-10 17:33:43] 2025-10-11 00:33:42,695 [wrapper] ==== wrapper stderr END ====
[2025-10-10 17:33:43]  *** Error codes and diagnostics ***
[2025-10-10 17:33:43]     "exeErrorCode": 65,
[2025-10-10 17:33:43]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 17:33:43]     "pilotErrorCode": 1305,
[2025-10-10 17:33:43]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 17:33:43]  *** Listing of results directory ***
[2025-10-10 17:33:43] total 221652
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc      5112 Oct 10 14:34 queuedata.json
[2025-10-10 17:33:43] -rwx------. 1 boinc boinc     36292 Oct 10 14:35 runpilot2-wrapper.sh
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc    557409 Oct 10 14:35 pilot3.tar.gz
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc       100 Oct 10 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 17:33:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 17:26 run_atlas
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc       105 Oct 10 17:26 job.xml
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc      6444 Oct 10 17:26 init_data.xml
[2025-10-10 17:33:43] -rw-r--r--. 2 boinc boinc 222840620 Oct 10 17:26 EVNT.46676267._001843.pool.root.1
[2025-10-10 17:33:43] -rw-r--r--. 2 boinc boinc     15120 Oct 10 17:26 start_atlas.sh
[2025-10-10 17:33:43] drwxrwx--x. 2 boinc boinc      4096 Oct 10 17:26 shared
[2025-10-10 17:33:43] -rw-r--r--. 2 boinc boinc    569679 Oct 10 17:26 input.tar.gz
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc         0 Oct 10 17:26 boinc_lockfile
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc      2549 Oct 10 17:26 pandaJob.out
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc    975525 Oct 10 17:27 agis_schedconf.cvmfs.json
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc   1560580 Oct 10 17:27 agis_ddmendpoints.agis.ALL.json
[2025-10-10 17:33:43] drwx------. 5 boinc boinc      4096 Oct 10 17:27 pilot3
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc       524 Oct 10 17:30 boinc_task_state.xml
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc       988 Oct 10 17:30 memory_monitor_summary.json
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc     23194 Oct 10 17:30 log.46676269._045587.job.log.tgz.1
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc      8416 Oct 10 17:33 heartbeat.json
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc      8192 Oct 10 17:33 boinc_mmap_file
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc        23 Oct 10 17:33 wrapper_checkpoint.txt
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc       822 Oct 10 17:33 pilotlog.txt
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc        95 Oct 10 17:33 pilot_heartbeat.json
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc    102715 Oct 10 17:33 log.46676269._045587.job.log.1
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc       188 Oct 10 17:33 output.list
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc       620 Oct 10 17:33 runtime_log
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc    143360 Oct 10 17:33 result.tar.gz
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc      8526 Oct 10 17:33 runtime_log.err
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc       644 Oct 10 17:33 25HKDmgwZR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3VeNDmkrJlXo.diag
[2025-10-10 17:33:43] -rw-r--r--. 1 boinc boinc      6181 Oct 10 17:33 stderr.txt
[2025-10-10 17:33:43] No HITS result produced
[2025-10-10 17:33:43]  *** Contents of shared directory: ***
[2025-10-10 17:33:43] total 218336
[2025-10-10 17:33:43] -rw-r--r--. 2 boinc boinc 222840620 Oct 10 17:26 ATLAS.root_0
[2025-10-10 17:33:43] -rw-r--r--. 2 boinc boinc     15120 Oct 10 17:26 start_atlas.sh
[2025-10-10 17:33:43] -rw-r--r--. 2 boinc boinc    569679 Oct 10 17:26 input.tar.gz
[2025-10-10 17:33:43] -rw-------. 1 boinc boinc    143360 Oct 10 17:33 result.tar.gz
17:33:44 (945385): run_atlas exited; CPU time 33.547855
17:33:44 (945385): called boinc_finish(0)

</stderr_txt>
]]>

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