Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
20:14:14 (3358466): wrapper (7.7.26015): starting
20:14:14 (3358466): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 20:14:14] Arguments: --nthreads 4
[2025-10-10 20:14:14] Threads: 4
[2025-10-10 20:14:14] Checking for CVMFS
[2025-10-10 20:14:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 20:14:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 20:14:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 20:14:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 20:14:14] 2.13.2.0 3732220 4400 60500 151565 1 188 2280455 4096000 12815 130560 0 30874360 99.998 279523 1390 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-10 20:14:14] CVMFS is ok
[2025-10-10 20:14:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 20:14:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-10 20:14:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-10 20:14:14] Further information can be found at the LHC@home message board.
[2025-10-10 20:14:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 20:14:14] Checking for apptainer binary...
[2025-10-10 20:14:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 20:14:14] Running /usr/bin/apptainer --version
[2025-10-10 20:14:14] apptainer version 1.4.3
[2025-10-10 20:14:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 20:14:15] T7810-Ubuntu
[2025-10-10 20:14:15] apptainer works
[2025-10-10 20:14:15] Set ATHENA_PROC_NUMBER=4
[2025-10-10 20:14:15] Set ATHENA_CORE_NUMBER=4
[2025-10-10 20:14:15] Starting ATLAS job with PandaID=6837630250
[2025-10-10 20:14:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 23:16:53]  *** The last 200 lines of the pilot log: ***
[2025-10-10 23:16:53] 2025-10-11 03:16:09,872 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 23:16:53] 2025-10-11 03:16:09,873 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 23:16:53] 2025-10-11 03:16:09,876 | INFO     | fitting pss+swap vs Time
[2025-10-10 23:16:53] 2025-10-11 03:16:09,877 | INFO     | sum of square deviations: 1778377530.0
[2025-10-10 23:16:53] 2025-10-11 03:16:09,878 | INFO     | sum of deviations: 15958958408.999998
[2025-10-10 23:16:53] 2025-10-11 03:16:09,878 | INFO     | mean x: 1760147125.0
[2025-10-10 23:16:53] 2025-10-11 03:16:09,878 | INFO     | mean y: 2274093.5083798883
[2025-10-10 23:16:53] 2025-10-11 03:16:09,879 | INFO     | -- intersect: -15793086727.09079
[2025-10-10 23:16:53] 2025-10-11 03:16:09,879 | INFO     | intersect: -15793086727.09079
[2025-10-10 23:16:53] 2025-10-11 03:16:09,879 | INFO     | chi2: 2.352287223231934
[2025-10-10 23:16:53] 2025-10-11 03:16:09,879 | INFO     | sum of square deviations: 1633472487.5
[2025-10-10 23:16:53] 2025-10-11 03:16:09,881 | INFO     | sum of deviations: 26587218531.5
[2025-10-10 23:16:53] 2025-10-11 03:16:09,881 | INFO     | mean x: 1760146972.5
[2025-10-10 23:16:53] 2025-10-11 03:16:09,881 | INFO     | mean y: 2285008.074712644
[2025-10-10 23:16:53] 2025-10-11 03:16:09,881 | INFO     | -- intersect: -28646751056.829086
[2025-10-10 23:16:53] 2025-10-11 03:16:09,881 | INFO     | intersect: -28646751056.829086
[2025-10-10 23:16:53] 2025-10-11 03:16:09,881 | INFO     | chi2: 1.519770868960718
[2025-10-10 23:16:53] 2025-10-11 03:16:09,882 | INFO     | current chi2=1.519770868960718 (change=35.39178149883316 %)
[2025-10-10 23:16:53] 2025-10-11 03:16:09,882 | INFO     | sum of square deviations: 1496660620.0
[2025-10-10 23:16:53] 2025-10-11 03:16:09,883 | INFO     | sum of deviations: 25637160154.0
[2025-10-10 23:16:53] 2025-10-11 03:16:09,883 | INFO     | mean x: 1760146820.0
[2025-10-10 23:16:53] 2025-10-11 03:16:09,883 | INFO     | mean y: 2283948.5384615385
[2025-10-10 23:16:53] 2025-10-11 03:16:09,883 | INFO     | -- intersect: -30148282797.110134
[2025-10-10 23:16:53] 2025-10-11 03:16:09,884 | INFO     | intersect: -30148282797.110134
[2025-10-10 23:16:53] 2025-10-11 03:16:09,884 | INFO     | chi2: 1.5209168810648055
[2025-10-10 23:16:53] 2025-10-11 03:16:09,884 | INFO     | current chi2=1.5209168810648055 (change=-0.07540690030934018 %)
[2025-10-10 23:16:53] 2025-10-11 03:16:09,884 | INFO     | right removable region: 168
[2025-10-10 23:16:53] 2025-10-11 03:16:09,884 | INFO     | sum of square deviations: 1633472487.5
[2025-10-10 23:16:53] 2025-10-11 03:16:09,886 | INFO     | sum of deviations: -9983874574.999998
[2025-10-10 23:16:53] 2025-10-11 03:16:09,886 | INFO     | mean x: 1760147277.5
[2025-10-10 23:16:53] 2025-10-11 03:16:09,886 | INFO     | mean y: 2301059.275862069
[2025-10-10 23:16:53] 2025-10-11 03:16:09,886 | INFO     | -- intersect: 10760418986.920307
[2025-10-10 23:16:53] 2025-10-11 03:16:09,886 | INFO     | intersect: 10760418986.920307
[2025-10-10 23:16:53] 2025-10-11 03:16:09,886 | INFO     | chi2: 0.8638141557944738
[2025-10-10 23:16:53] 2025-10-11 03:16:09,887 | INFO     | current chi2=0.8638141557944738 (change=63.27769214306945 %)
[2025-10-10 23:16:53] 2025-10-11 03:16:09,887 | INFO     | sum of square deviations: 1496660620.0
[2025-10-10 23:16:53] 2025-10-11 03:16:09,888 | INFO     | sum of deviations: -10325196476.0
[2025-10-10 23:16:53] 2025-10-11 03:16:09,888 | INFO     | mean x: 1760147430.0
[2025-10-10 23:16:53] 2025-10-11 03:16:09,888 | INFO     | mean y: 2301422.1952662724
[2025-10-10 23:16:53] 2025-10-11 03:16:09,888 | INFO     | -- intersect: 12145246722.297073
[2025-10-10 23:16:53] 2025-10-11 03:16:09,888 | INFO     | intersect: 12145246722.297073
[2025-10-10 23:16:53] 2025-10-11 03:16:09,889 | INFO     | chi2: 0.8608551116994944
[2025-10-10 23:16:53] 2025-10-11 03:16:09,889 | INFO     | current chi2=0.8608551116994944 (change=0.342555638285179 %)
[2025-10-10 23:16:53] 2025-10-11 03:16:09,889 | INFO     | left removable region: 20
[2025-10-10 23:16:53] 2025-10-11 03:16:09,889 | INFO     | sum of square deviations: 1005179777.0
[2025-10-10 23:16:53] 2025-10-11 03:16:09,890 | INFO     | sum of deviations: -126838459.00000013
[2025-10-10 23:16:53] 2025-10-11 03:16:09,890 | INFO     | mean x: 1760147399.5
[2025-10-10 23:16:53] 2025-10-11 03:16:09,890 | INFO     | mean y: 2314044.121621622
[2025-10-10 23:16:53] 2025-10-11 03:16:09,890 | INFO     | -- intersect: 224417979.0333937
[2025-10-10 23:16:53] 2025-10-11 03:16:09,890 | INFO     | intersect: 224417979.0333937
[2025-10-10 23:16:53] 2025-10-11 03:16:09,891 | INFO     | chi2: 0.0016071498480101775
[2025-10-10 23:16:53] 2025-10-11 03:16:09,891 | INFO     | -- intersect: 224417979.0333937
[2025-10-10 23:16:53] 2025-10-11 03:16:09,891 | INFO     | current memory leak: -0.13 B/s (using 148 data points, chi2=0.00)
[2025-10-10 23:16:53] 2025-10-11 03:16:09,892 | INFO     | could have reported an average CPU frequency of 2693 MHz (10 samples)
[2025-10-10 23:16:53] 2025-10-11 03:16:09,892 | INFO     | ..............................
[2025-10-10 23:16:53] 2025-10-11 03:16:09,892 | INFO     | . Timing measurements:
[2025-10-10 23:16:53] 2025-10-11 03:16:09,892 | INFO     | . get job = 0 s
[2025-10-10 23:16:53] 2025-10-11 03:16:09,892 | INFO     | . initial setup = 4 s
[2025-10-10 23:16:53] 2025-10-11 03:16:09,892 | INFO     | . payload setup = 6 s
[2025-10-10 23:16:53] 2025-10-11 03:16:09,892 | INFO     | . stage-in = 0 s
[2025-10-10 23:16:53] 2025-10-11 03:16:09,892 | INFO     | . payload execution = 10862 s
[2025-10-10 23:16:53] 2025-10-11 03:16:09,893 | INFO     | . stage-out = 2 s
[2025-10-10 23:16:53] 2025-10-11 03:16:09,893 | INFO     | . log creation = 0 s
[2025-10-10 23:16:53] 2025-10-11 03:16:09,893 | INFO     | ..............................
[2025-10-10 23:16:53] 2025-10-11 03:16:10,499 | INFO     | 
[2025-10-10 23:16:53] 2025-10-11 03:16:10,499 | INFO     | job summary report
[2025-10-10 23:16:53] 2025-10-11 03:16:10,499 | INFO     | --------------------------------------------------
[2025-10-10 23:16:53] 2025-10-11 03:16:10,499 | INFO     | PanDA job id: 6837630250
[2025-10-10 23:16:53] 2025-10-11 03:16:10,499 | INFO     | task id: 46676269
[2025-10-10 23:16:53] 2025-10-11 03:16:10,500 | INFO     | errors: (none)
[2025-10-10 23:16:53] 2025-10-11 03:16:10,500 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 23:16:53] 2025-10-11 03:16:10,500 | INFO     | pilot state: finished 
[2025-10-10 23:16:53] 2025-10-11 03:16:10,500 | INFO     | transexitcode: 0
[2025-10-10 23:16:53] 2025-10-11 03:16:10,500 | INFO     | exeerrorcode: 0
[2025-10-10 23:16:53] 2025-10-11 03:16:10,500 | INFO     | exeerrordiag: 
[2025-10-10 23:16:53] 2025-10-11 03:16:10,500 | INFO     | exitcode: 0
[2025-10-10 23:16:53] 2025-10-11 03:16:10,500 | INFO     | exitmsg: OK
[2025-10-10 23:16:53] 2025-10-11 03:16:10,500 | INFO     | cpuconsumptiontime: 42238 s
[2025-10-10 23:16:53] 2025-10-11 03:16:10,501 | INFO     | nevents: 400
[2025-10-10 23:16:53] 2025-10-11 03:16:10,501 | INFO     | neventsw: 0
[2025-10-10 23:16:53] 2025-10-11 03:16:10,501 | INFO     | pid: 3369456
[2025-10-10 23:16:53] 2025-10-11 03:16:10,501 | INFO     | pgrp: 3369456
[2025-10-10 23:16:53] 2025-10-11 03:16:10,501 | INFO     | corecount: 4
[2025-10-10 23:16:53] 2025-10-11 03:16:10,501 | INFO     | event service: False
[2025-10-10 23:16:53] 2025-10-11 03:16:10,501 | INFO     | sizes: {0: 2348644, 1: 2348899, 6: 2349161, 12: 2349189, 10872: 2378282, 10873: 2378281, 10876: 2387491, 10879: 2387547, 10885: 2387741}
[2025-10-10 23:16:53] 2025-10-11 03:16:10,501 | INFO     | --------------------------------------------------
[2025-10-10 23:16:53] 2025-10-11 03:16:10,501 | INFO     | 
[2025-10-10 23:16:53] 2025-10-11 03:16:10,501 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/4
[2025-10-10 23:16:53] 2025-10-11 03:16:10,521 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,522 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,522 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,522 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,522 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,522 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,523 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,523 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,523 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,523 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,523 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,524 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 23:16:53] 2025-10-11 03:16:10,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,524 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 23:16:53] 2025-10-11 03:16:10,524 | INFO     | job 6837630250 has completed (purged errors)
[2025-10-10 23:16:53] 2025-10-11 03:16:10,524 | INFO     | overall cleanup function is called
[2025-10-10 23:16:53] 2025-10-11 03:16:11,533 | INFO     | --- collectZombieJob: --- 10, [3369456]
[2025-10-10 23:16:53] 2025-10-11 03:16:11,533 | INFO     | zombie collector waiting for pid 3369456
[2025-10-10 23:16:53] 2025-10-11 03:16:11,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 23:16:53] 2025-10-11 03:16:11,533 | INFO     | collected zombie processes
[2025-10-10 23:16:53] 2025-10-11 03:16:11,533 | INFO     | will attempt to kill all subprocesses of pid=3369456
[2025-10-10 23:16:53] 2025-10-11 03:16:12,062 | INFO     | process IDs to be killed: [3369456] (in reverse order)
[2025-10-10 23:16:53] 2025-10-11 03:16:12,174 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 23:16:53] 2025-10-11 03:16:12,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 23:16:53] 2025-10-11 03:16:12,187 | INFO     | did not find any defunct processes belonging to 3369456
[2025-10-10 23:16:53] 2025-10-11 03:16:12,197 | INFO     | did not find any defunct processes belonging to 3369456
[2025-10-10 23:16:53] 2025-10-11 03:16:12,198 | INFO     | ready for new job
[2025-10-10 23:16:53] 2025-10-11 03:16:12,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 23:16:53] 2025-10-11 03:16:12,200 | INFO     | ***************************************
[2025-10-10 23:16:53] 2025-10-11 03:16:12,200 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 23:16:53] 2025-10-11 03:16:12,200 | INFO     | ***************************************
[2025-10-10 23:16:53] 2025-10-11 03:16:12,201 | INFO     | 
[2025-10-10 23:16:53] 2025-10-11 03:16:12,204 | INFO     | architecture information:
[2025-10-10 23:16:53] 2025-10-11 03:16:12,204 | INFO     | executing command: cat /etc/os-release
[2025-10-10 23:16:53] 2025-10-11 03:16:12,219 | INFO     | cat /etc/os-release:
[2025-10-10 23:16:53] NAME="CentOS Linux"
[2025-10-10 23:16:53] VERSION="7 (Core)"
[2025-10-10 23:16:53] ID="centos"
[2025-10-10 23:16:53] ID_LIKE="rhel fedora"
[2025-10-10 23:16:53] VERSION_ID="7"
[2025-10-10 23:16:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 23:16:53] ANSI_COLOR="0;31"
[2025-10-10 23:16:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 23:16:53] HOME_URL="https://www.centos.org/"
[2025-10-10 23:16:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 23:16:53] 
[2025-10-10 23:16:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 23:16:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 23:16:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 23:16:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 23:16:53] 
[2025-10-10 23:16:53] 2025-10-11 03:16:12,219 | INFO     | ***************************************
[2025-10-10 23:16:53] 2025-10-11 03:16:12,722 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/4
[2025-10-10 23:16:53] 2025-10-11 03:16:12,740 | INFO     | sufficient remaining disk space (399072296960 B)
[2025-10-10 23:16:53] 2025-10-11 03:16:12,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 23:16:53] 2025-10-11 03:16:12,740 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 23:16:53] 2025-10-11 03:16:12,740 | INFO     | update_server=False
[2025-10-10 23:16:53] 2025-10-11 03:16:12,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 23:16:53] 2025-10-11 03:16:12,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 23:16:53] 2025-10-11 03:16:12,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:16:53] 2025-10-11 03:16:12,741 | INFO     | aborting loop
[2025-10-10 23:16:53] 2025-10-11 03:16:13,488 | INFO     | all data control threads have been joined
[2025-10-10 23:16:53] 2025-10-11 03:16:13,649 | INFO     | all job control threads have been joined
[2025-10-10 23:16:53] 2025-10-11 03:16:13,745 | INFO     | [job] retrieve thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:13,747 | INFO     | [job] job monitor thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:14,167 | INFO     | all payload control threads have been joined
[2025-10-10 23:16:53] 2025-10-11 03:16:14,413 | INFO     | [payload] failed_post thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:14,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 23:16:53] 2025-10-11 03:16:14,494 | INFO     | [data] control thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:14,627 | INFO     | [job] validate thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:14,654 | INFO     | [job] control thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:14,682 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:14,746 | INFO     | [data] copytool_out thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:14,962 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:14,983 | INFO     | [data] copytool_in thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:15,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:16:53] 2025-10-11 03:16:15,133 | INFO     | [payload] validate_post thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:15,168 | INFO     | [payload] control thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:15,206 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:16,008 | INFO     | [job] queue monitor thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:18,475 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:23,173 | INFO     | job.realtimelogging is not enabled
[2025-10-10 23:16:53] 2025-10-11 03:16:24,178 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 23:16:53] 2025-10-11 03:16:42,961 | INFO     | PID=3362496 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 23:16:53] 2025-10-11 03:16:42,962 | INFO     | .. there are 16 such processes running
[2025-10-10 23:16:53] 2025-10-11 03:16:42,962 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 23:16:53] 2025-10-11 03:16:42,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 23:16:53] 2025-10-11 03:16:42,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 23:16:53] 2025-10-11 03:16:46,318 | INFO     | [monitor] cgroup control has ended
[2025-10-10 23:16:53] 2025-10-11 03:16:48,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131409947150144)>', '<ExcThread(monitor, started 131409440118528)>']
[2025-10-10 23:16:53] 2025-10-11 03:16:48,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 23:16:53] 2025-10-11 03:16:48,992 | INFO     | [monitor] control thread has ended
[2025-10-10 23:16:53] 2025-10-11 03:16:53,389 | INFO     | all workflow threads have been joined
[2025-10-10 23:16:53] 2025-10-11 03:16:53,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 23:16:53] 2025-10-11 03:16:53,390 | INFO     | traces error code: 0
[2025-10-10 23:16:53] 2025-10-11 03:16:53,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 23:16:53] 2025-10-11 03:16:53,506 [wrapper] ==== pilot stdout END ====
[2025-10-10 23:16:53] 2025-10-11 03:16:53,509 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 23:16:53] 2025-10-11 03:16:53,512 [wrapper] pilotpid: 3362496
[2025-10-10 23:16:53] 2025-10-11 03:16:53,514 [wrapper] Pilot exit status: 0
[2025-10-10 23:16:53] 2025-10-11 03:16:53,526 [wrapper] pandaids: 6837630250
[2025-10-10 23:16:53] 2025-10-11 03:16:53,602 [wrapper] cleanup supervisor_pilot 3849065 3362497
[2025-10-10 23:16:53] 2025-10-11 03:16:53,605 [wrapper] Test setup, not cleaning
[2025-10-10 23:16:53] 2025-10-11 03:16:53,608 [wrapper] apfmon messages muted
[2025-10-10 23:16:53] 2025-10-11 03:16:53,611 [wrapper] ==== wrapper stdout END ====
[2025-10-10 23:16:53] 2025-10-11 03:16:53,614 [wrapper] ==== wrapper stderr END ====
[2025-10-10 23:16:53]  *** Error codes and diagnostics ***
[2025-10-10 23:16:53]     "exeErrorCode": 0,
[2025-10-10 23:16:53]     "exeErrorDiag": "",
[2025-10-10 23:16:53]     "pilotErrorCode": 0,
[2025-10-10 23:16:53]     "pilotErrorDiag": "",
[2025-10-10 23:16:53]  *** Listing of results directory ***
[2025-10-10 23:16:53] total 417556
[2025-10-10 23:16:53] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 10 09:04 pilot3.tar.gz
[2025-10-10 23:16:53] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 10 09:09 queuedata.json
[2025-10-10 23:16:53] -rwx------ 1 whitlerd whitlerd     36292 Oct 10 09:10 runpilot2-wrapper.sh
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 10 20:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 23:16:53] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 10 20:14 run_atlas
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 10 20:14 job.xml
[2025-10-10 23:16:53] -rw-r--r-- 2 whitlerd whitlerd 223273147 Oct 10 20:14 EVNT.46676267._001578.pool.root.1
[2025-10-10 23:16:53] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 10 20:14 start_atlas.sh
[2025-10-10 23:16:53] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 10 20:14 shared
[2025-10-10 23:16:53] -rw-r--r-- 2 whitlerd whitlerd    569685 Oct 10 20:14 input.tar.gz
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 10 20:14 boinc_setup_complete
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd      8956 Oct 10 20:14 init_data.xml
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 10 20:14 boinc_lockfile
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd      2550 Oct 10 20:14 pandaJob.out
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd    975525 Oct 10 20:14 agis_schedconf.cvmfs.json
[2025-10-10 23:16:53] drwx------ 5 whitlerd whitlerd      4096 Oct 10 20:14 pilot3
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd 196578902 Oct 10 23:15 HITS.46676269._038890.pool.root.1
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd       531 Oct 10 23:15 boinc_task_state.xml
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd      1032 Oct 10 23:15 memory_monitor_summary.json
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd   1560580 Oct 10 23:16 agis_ddmendpoints.agis.ALL.json
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd    365356 Oct 10 23:16 log.46676269._038890.job.log.tgz.1
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd        95 Oct 10 23:16 pilot_heartbeat.json
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd      7790 Oct 10 23:16 heartbeat.json
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 10 23:16 wrapper_checkpoint.txt
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 10 23:16 boinc_mmap_file
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd      4911 Oct 10 23:16 pilotlog.txt
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd   1541659 Oct 10 23:16 log.46676269._038890.job.log.1
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd       357 Oct 10 23:16 output.list
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 10 23:16 runtime_log
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd   1925120 Oct 10 23:16 result.tar.gz
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd      8879 Oct 10 23:16 runtime_log.err
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd       650 Oct 10 23:16 pLXKDmN4RR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaPdNDmz5OKzm.diag
[2025-10-10 23:16:53] -rw-rw-r-- 1 whitlerd whitlerd     21012 Oct 10 23:16 stderr.txt
[2025-10-10 23:16:53] HITS file was successfully produced:
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd 196578902 Oct 10 23:15 shared/HITS.pool.root.1
[2025-10-10 23:16:53]  *** Contents of shared directory: ***
[2025-10-10 23:16:53] total 412480
[2025-10-10 23:16:53] -rw-r--r-- 2 whitlerd whitlerd 223273147 Oct 10 20:14 ATLAS.root_0
[2025-10-10 23:16:53] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 10 20:14 start_atlas.sh
[2025-10-10 23:16:53] -rw-r--r-- 2 whitlerd whitlerd    569685 Oct 10 20:14 input.tar.gz
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd 196578902 Oct 10 23:15 HITS.pool.root.1
[2025-10-10 23:16:53] -rw------- 1 whitlerd whitlerd   1925120 Oct 10 23:16 result.tar.gz
23:16:55 (3358466): run_atlas exited; CPU time 42869.697368
23:16:55 (3358466): called boinc_finish(0)

</stderr_txt>
]]>

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