Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:19:45 (1307567): wrapper (7.7.26015): starting
01:19:45 (1307567): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 01:19:45] Arguments: --nthreads 12
[2025-10-11 01:19:45] Threads: 12
[2025-10-11 01:19:45] Checking for CVMFS
[2025-10-11 01:19:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 01:19:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 01:19:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 01:19:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 01:19:45] 2.13.2.0 3843265 2595 57124 151575 3 188 3142912 6144000 3608 130560 0 15562285 99.998 210746 527 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 01:19:45] CVMFS is ok
[2025-10-11 01:19:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 01:19:45] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 01:19:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 01:19:45] Further information can be found at the LHC@home message board.
[2025-10-11 01:19:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 01:19:45] Checking for apptainer binary...
[2025-10-11 01:19:45] apptainer is not installed, using version from CVMFS
[2025-10-11 01:19:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 01:19:46] XeonFire
[2025-10-11 01:19:46] apptainer works
[2025-10-11 01:19:46] Set ATHENA_PROC_NUMBER=12
[2025-10-11 01:19:46] Set ATHENA_CORE_NUMBER=12
[2025-10-11 01:19:46] Starting ATLAS job with PandaID=6837508297
[2025-10-11 01:19:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 02:17:22]  *** The last 200 lines of the pilot log: ***
[2025-10-11 02:17:22]  storage_token=
[2025-10-11 02:17:22]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6837508297/log.46676269._034168.job.log.tgz.1
[2025-10-11 02:17:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/29/log.46676269._034168.job.log.tgz.1
[2025-10-11 02:17:22]  workdir=None
[2025-10-11 02:17:22] ]
[2025-10-11 02:17:22] 2025-10-11 07:16:12,313 | INFO     | transferring file log.46676269._034168.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6837508297/log.46676269._034168.job.log.tgz.1 to /var/lib/boinc
[2025-10-11 02:17:22] 2025-10-11 07:16:12,314 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6837508297/log.46676269._034168.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.466762
[2025-10-11 02:17:22] 2025-10-11 07:16:12,330 | INFO     | adding to output.list: log.46676269._034168.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/29/log.46676269._034168.job.log.tg
[2025-10-11 02:17:22] 2025-10-11 07:16:12,331 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 02:17:22] 2025-10-11 07:16:12,331 | INFO     | summary of transferred files:
[2025-10-11 02:17:22] 2025-10-11 07:16:12,331 | INFO     |  -- lfn=log.46676269._034168.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 02:17:22] 2025-10-11 07:16:12,331 | INFO     | stage-out finished correctly
[2025-10-11 02:17:22] 2025-10-11 07:16:12,408 | INFO     | time since job start (3360s) is within the limit (172800.0s)
[2025-10-11 02:17:22] 2025-10-11 07:16:13,435 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 02:17:22] 2025-10-11 07:16:14,413 | INFO     | time since job start (3362s) is within the limit (172800.0s)
[2025-10-11 02:17:22] 2025-10-11 07:16:14,914 | WARNING  | process 1318640 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 02:17:22] 2025-10-11 07:16:14,915 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6837508297/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 02:17:22] 2025-10-11 07:16:15,063 | INFO     | job 6837508297 has state=finished
[2025-10-11 02:17:22] 2025-10-11 07:16:15,063 | INFO     | preparing for final server update for job 6837508297 in state='finished'
[2025-10-11 02:17:22] 2025-10-11 07:16:15,175 | INFO     | number of running child processes to parent process 1318640: 1
[2025-10-11 02:17:22] 2025-10-11 07:16:15,176 | INFO     | maximum number of monitored processes: 6
[2025-10-11 02:17:22] 2025-10-11 07:16:15,380 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-11 02:17:22] 2025-10-11 07:16:15,381 | INFO     | this job has now completed (state=finished)
[2025-10-11 02:17:22] 2025-10-11 07:16:15,381 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 02:17:22] 2025-10-11 07:16:15,381 | INFO     | log transfer has been attempted: DONE
[2025-10-11 02:17:22] 2025-10-11 07:16:15,381 | INFO     | job 6837508297 has finished - writing final server update
[2025-10-11 02:17:22] 2025-10-11 07:16:15,382 | INFO     | total number of processed events: 400 (read)
[2025-10-11 02:17:22] 2025-10-11 07:16:15,384 | INFO     | executing command: lscpu
[2025-10-11 02:17:22] 2025-10-11 07:16:15,434 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 02:17:22] 2025-10-11 07:16:15,842 | INFO     | PID=1311616 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 02:17:22] 2025-10-11 07:16:15,842 | INFO     | .. there are 5 such processes running
[2025-10-11 02:17:22] 2025-10-11 07:16:16,843 | INFO     | time since job start (3364s) is within the limit (172800.0s)
[2025-10-11 02:17:22] 2025-10-11 07:16:17,678 | INFO     | monitor loop #247: job 0:6837508297 is in state 'finished'
[2025-10-11 02:17:22] 2025-10-11 07:16:17,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 02:17:22] 2025-10-11 07:16:18,848 | INFO     | time since job start (3366s) is within the limit (172800.0s)
[2025-10-11 02:17:22] 2025-10-11 07:16:19,457 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 02:17:22] 2025-10-11 07:16:19,472 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 1939.8576136363636
[2025-10-11 02:17:22] 2025-10-11 07:16:19,488 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6837508297/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 02:17:22] 2025-10-11 07:16:19,489 | INFO     | extracted standard info from prmon json
[2025-10-11 02:17:22] 2025-10-11 07:16:19,489 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 02:17:22] 2025-10-11 07:16:19,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 02:17:22] 2025-10-11 07:16:19,490 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 02:17:22] 2025-10-11 07:16:19,490 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 02:17:22] 2025-10-11 07:16:19,491 | INFO     | fitting pss+swap vs Time
[2025-10-11 02:17:22] 2025-10-11 07:16:19,492 | INFO     | sum of square deviations: 34277852.0
[2025-10-11 02:17:22] 2025-10-11 07:16:19,492 | INFO     | sum of deviations: -515548637.0
[2025-10-11 02:17:22] 2025-10-11 07:16:19,492 | INFO     | mean x: 1760165374.5
[2025-10-11 02:17:22] 2025-10-11 07:16:19,492 | INFO     | mean y: 2799585.0
[2025-10-11 02:17:22] 2025-10-11 07:16:19,492 | INFO     | -- intersect: 26476187115.76096
[2025-10-11 02:17:22] 2025-10-11 07:16:19,493 | INFO     | intersect: 26476187115.76096
[2025-10-11 02:17:22] 2025-10-11 07:16:19,493 | INFO     | chi2: 0.0038322570746227667
[2025-10-11 02:17:22] 2025-10-11 07:16:19,493 | INFO     | -- intersect: 26476187115.76096
[2025-10-11 02:17:22] 2025-10-11 07:16:19,493 | INFO     | current memory leak: -15.04 B/s (using 48 data points, chi2=0.00)
[2025-10-11 02:17:22] 2025-10-11 07:16:19,493 | INFO     | could have reported an average CPU frequency of 2216 MHz (5 samples)
[2025-10-11 02:17:22] 2025-10-11 07:16:19,493 | INFO     | ..............................
[2025-10-11 02:17:22] 2025-10-11 07:16:19,494 | INFO     | . Timing measurements:
[2025-10-11 02:17:22] 2025-10-11 07:16:19,494 | INFO     | . get job = 0 s
[2025-10-11 02:17:22] 2025-10-11 07:16:19,494 | INFO     | . initial setup = 16 s
[2025-10-11 02:17:22] 2025-10-11 07:16:19,494 | INFO     | . payload setup = 5 s
[2025-10-11 02:17:22] 2025-10-11 07:16:19,494 | INFO     | . stage-in = 0 s
[2025-10-11 02:17:22] 2025-10-11 07:16:19,494 | INFO     | . payload execution = 3335 s
[2025-10-11 02:17:22] 2025-10-11 07:16:19,494 | INFO     | . stage-out = 0 s
[2025-10-11 02:17:22] 2025-10-11 07:16:19,494 | INFO     | . log creation = 0 s
[2025-10-11 02:17:22] 2025-10-11 07:16:19,494 | INFO     | ..............................
[2025-10-11 02:17:22] 2025-10-11 07:16:19,580 | INFO     | 
[2025-10-11 02:17:22] 2025-10-11 07:16:19,580 | INFO     | job summary report
[2025-10-11 02:17:22] 2025-10-11 07:16:19,580 | INFO     | --------------------------------------------------
[2025-10-11 02:17:22] 2025-10-11 07:16:19,581 | INFO     | PanDA job id: 6837508297
[2025-10-11 02:17:22] 2025-10-11 07:16:19,581 | INFO     | task id: 46676269
[2025-10-11 02:17:22] 2025-10-11 07:16:19,581 | INFO     | errors: (none)
[2025-10-11 02:17:22] 2025-10-11 07:16:19,581 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 02:17:22] 2025-10-11 07:16:19,581 | INFO     | pilot state: finished 
[2025-10-11 02:17:22] 2025-10-11 07:16:19,581 | INFO     | transexitcode: 0
[2025-10-11 02:17:22] 2025-10-11 07:16:19,581 | INFO     | exeerrorcode: 0
[2025-10-11 02:17:22] 2025-10-11 07:16:19,581 | INFO     | exeerrordiag: 
[2025-10-11 02:17:22] 2025-10-11 07:16:19,581 | INFO     | exitcode: 0
[2025-10-11 02:17:22] 2025-10-11 07:16:19,582 | INFO     | exitmsg: OK
[2025-10-11 02:17:22] 2025-10-11 07:16:19,582 | INFO     | cpuconsumptiontime: 35233 s
[2025-10-11 02:17:22] 2025-10-11 07:16:19,582 | INFO     | nevents: 400
[2025-10-11 02:17:22] 2025-10-11 07:16:19,582 | INFO     | neventsw: 0
[2025-10-11 02:17:22] 2025-10-11 07:16:19,582 | INFO     | pid: 1318640
[2025-10-11 02:17:22] 2025-10-11 07:16:19,582 | INFO     | pgrp: 1318640
[2025-10-11 02:17:22] 2025-10-11 07:16:19,582 | INFO     | corecount: 12
[2025-10-11 02:17:22] 2025-10-11 07:16:19,582 | INFO     | event service: False
[2025-10-11 02:17:22] 2025-10-11 07:16:19,582 | INFO     | sizes: {0: 2348637, 1: 2348892, 5: 2349154, 12: 2349210, 3344: 2374722, 3345: 2383734, 3347: 2383918, 3353: 2384144}
[2025-10-11 02:17:22] 2025-10-11 07:16:19,583 | INFO     | --------------------------------------------------
[2025-10-11 02:17:22] 2025-10-11 07:16:19,583 | INFO     | 
[2025-10-11 02:17:22] 2025-10-11 07:16:19,583 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-11 02:17:22] 2025-10-11 07:16:19,608 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,609 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,609 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,609 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,610 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,610 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,610 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 02:17:22] 2025-10-11 07:16:19,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 02:17:22] 2025-10-11 07:16:19,611 | INFO     | job 6837508297 has completed (purged errors)
[2025-10-11 02:17:22] 2025-10-11 07:16:19,611 | INFO     | overall cleanup function is called
[2025-10-11 02:17:22] 2025-10-11 07:16:20,620 | INFO     | --- collectZombieJob: --- 10, [1318640]
[2025-10-11 02:17:22] 2025-10-11 07:16:20,620 | INFO     | zombie collector waiting for pid 1318640
[2025-10-11 02:17:22] 2025-10-11 07:16:20,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 02:17:22] 2025-10-11 07:16:20,621 | INFO     | collected zombie processes
[2025-10-11 02:17:22] 2025-10-11 07:16:20,621 | INFO     | will attempt to kill all subprocesses of pid=1318640
[2025-10-11 02:17:22] 2025-10-11 07:16:20,861 | INFO     | process IDs to be killed: [1318640] (in reverse order)
[2025-10-11 02:17:22] 2025-10-11 07:16:20,963 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 02:17:22] 2025-10-11 07:16:20,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 02:17:22] 2025-10-11 07:16:20,976 | INFO     | did not find any defunct processes belonging to 1318640
[2025-10-11 02:17:22] 2025-10-11 07:16:20,987 | INFO     | did not find any defunct processes belonging to 1318640
[2025-10-11 02:17:22] 2025-10-11 07:16:20,988 | INFO     | ready for new job
[2025-10-11 02:17:22] 2025-10-11 07:16:20,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 02:17:22] 2025-10-11 07:16:20,990 | INFO     | ***************************************
[2025-10-11 02:17:22] 2025-10-11 07:16:20,990 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 02:17:22] 2025-10-11 07:16:20,990 | INFO     | ***************************************
[2025-10-11 02:17:22] 2025-10-11 07:16:20,990 | INFO     | 
[2025-10-11 02:17:22] 2025-10-11 07:16:20,995 | INFO     | architecture information:
[2025-10-11 02:17:22] 2025-10-11 07:16:20,996 | INFO     | executing command: cat /etc/os-release
[2025-10-11 02:17:22] 2025-10-11 07:16:21,009 | INFO     | cat /etc/os-release:
[2025-10-11 02:17:22] NAME="CentOS Linux"
[2025-10-11 02:17:22] VERSION="7 (Core)"
[2025-10-11 02:17:22] ID="centos"
[2025-10-11 02:17:22] ID_LIKE="rhel fedora"
[2025-10-11 02:17:22] VERSION_ID="7"
[2025-10-11 02:17:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 02:17:22] ANSI_COLOR="0;31"
[2025-10-11 02:17:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 02:17:22] HOME_URL="https://www.centos.org/"
[2025-10-11 02:17:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 02:17:22] 
[2025-10-11 02:17:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 02:17:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 02:17:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 02:17:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 02:17:22] 
[2025-10-11 02:17:22] 2025-10-11 07:16:21,009 | INFO     | ***************************************
[2025-10-11 02:17:22] 2025-10-11 07:16:21,512 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-11 02:17:22] 2025-10-11 07:16:21,530 | INFO     | sufficient remaining disk space (1819137802240 B)
[2025-10-11 02:17:22] 2025-10-11 07:16:21,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 02:17:22] 2025-10-11 07:16:21,531 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 02:17:22] 2025-10-11 07:16:21,531 | INFO     | update_server=False
[2025-10-11 02:17:22] 2025-10-11 07:16:21,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 02:17:22] 2025-10-11 07:16:21,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:17:22] 2025-10-11 07:16:21,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:17:22] 2025-10-11 07:16:21,532 | INFO     | aborting loop
[2025-10-11 02:17:22] 2025-10-11 07:16:22,028 | INFO     | all data control threads have been joined
[2025-10-11 02:17:22] 2025-10-11 07:16:22,534 | INFO     | [job] job monitor thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:22,537 | INFO     | [job] retrieve thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:22,537 | INFO     | [job] queue monitor thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:22,576 | INFO     | all job control threads have been joined
[2025-10-11 02:17:22] 2025-10-11 07:16:22,839 | INFO     | all payload control threads have been joined
[2025-10-11 02:17:22] 2025-10-11 07:16:22,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 02:17:22] 2025-10-11 07:16:22,969 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:23,033 | INFO     | [data] control thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:23,350 | INFO     | [data] copytool_in thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:23,484 | INFO     | [job] validate thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:23,581 | INFO     | [job] control thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:23,732 | INFO     | [payload] validate_post thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:23,841 | INFO     | [payload] control thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:23,900 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:23,942 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:23,946 | INFO     | [payload] failed_post thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:24,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 02:17:22] 2025-10-11 07:16:24,911 | INFO     | [data] copytool_out thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:28,051 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:32,379 | INFO     | job.realtimelogging is not enabled
[2025-10-11 02:17:22] 2025-10-11 07:16:33,385 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 02:17:22] 2025-10-11 07:16:52,460 | INFO     | PID=1311616 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 02:17:22] 2025-10-11 07:16:52,461 | INFO     | .. there are 5 such processes running
[2025-10-11 02:17:22] 2025-10-11 07:16:52,461 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 02:17:22] 2025-10-11 07:16:52,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 02:17:22] 2025-10-11 07:16:52,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 02:17:22] 2025-10-11 07:17:16,744 | INFO     | [monitor] cgroup control has ended
[2025-10-11 02:17:22] 2025-10-11 07:17:17,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873315874624)>', '<ExcThread(monitor, started 139872639637248)>']
[2025-10-11 02:17:22] 2025-10-11 07:17:17,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 02:17:22] 2025-10-11 07:17:17,587 | INFO     | [monitor] control thread has ended
[2025-10-11 02:17:22] 2025-10-11 07:17:22,085 | INFO     | all workflow threads have been joined
[2025-10-11 02:17:22] 2025-10-11 07:17:22,086 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 02:17:22] 2025-10-11 07:17:22,086 | INFO     | traces error code: 0
[2025-10-11 02:17:22] 2025-10-11 07:17:22,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 02:17:22] 2025-10-11 07:17:22,187 [wrapper] ==== pilot stdout END ====
[2025-10-11 02:17:22] 2025-10-11 07:17:22,189 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 02:17:22] 2025-10-11 07:17:22,194 [wrapper] pilotpid: 1311616
[2025-10-11 02:17:22] 2025-10-11 07:17:22,197 [wrapper] Pilot exit status: 0
[2025-10-11 02:17:22] 2025-10-11 07:17:22,214 [wrapper] pandaids: 6837508297
[2025-10-11 02:17:22] 2025-10-11 07:17:22,292 [wrapper] cleanup supervisor_pilot 1386064 1311617
[2025-10-11 02:17:22] 2025-10-11 07:17:22,295 [wrapper] Test setup, not cleaning
[2025-10-11 02:17:22] 2025-10-11 07:17:22,297 [wrapper] apfmon messages muted
[2025-10-11 02:17:22] 2025-10-11 07:17:22,299 [wrapper] ==== wrapper stdout END ====
[2025-10-11 02:17:22] 2025-10-11 07:17:22,302 [wrapper] ==== wrapper stderr END ====
[2025-10-11 02:17:22]  *** Error codes and diagnostics ***
[2025-10-11 02:17:22]     "exeErrorCode": 0,
[2025-10-11 02:17:22]     "exeErrorDiag": "",
[2025-10-11 02:17:22]     "pilotErrorCode": 0,
[2025-10-11 02:17:22]     "pilotErrorDiag": "",
[2025-10-11 02:17:22]  *** Listing of results directory ***
[2025-10-11 02:17:22] total 415544
[2025-10-11 02:17:22] -rw-r--r-- 1 mark mark      5112 Oct 10 01:55 queuedata.json
[2025-10-11 02:17:22] -rw-r--r-- 1 mark mark    557409 Oct 10 01:56 pilot3.tar.gz
[2025-10-11 02:17:22] -rwx------ 1 mark mark     36292 Oct 10 01:56 runpilot2-wrapper.sh
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark       100 Oct 11 01:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 02:17:22] -rwxr-xr-x 1 mark mark      7986 Oct 11 01:19 run_atlas
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark       105 Oct 11 01:19 job.xml
[2025-10-11 02:17:22] -rw-r--r-- 2 mark mark 223213236 Oct 11 01:19 EVNT.46676267._001390.pool.root.1
[2025-10-11 02:17:22] -rw-r--r-- 2 mark mark     15120 Oct 11 01:19 start_atlas.sh
[2025-10-11 02:17:22] drwxrwx--x 2 mark mark      4096 Oct 11 01:19 shared
[2025-10-11 02:17:22] -rw-r--r-- 2 mark mark    569678 Oct 11 01:19 input.tar.gz
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark      9229 Oct 11 01:19 init_data.xml
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark         0 Oct 11 01:19 boinc_setup_complete
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark         0 Oct 11 01:19 boinc_lockfile
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark      2550 Oct 11 01:19 pandaJob.out
[2025-10-11 02:17:22] -rw------- 1 mark mark    975525 Oct 11 01:19 agis_schedconf.cvmfs.json
[2025-10-11 02:17:22] -rw------- 1 mark mark   1560580 Oct 11 01:20 agis_ddmendpoints.agis.ALL.json
[2025-10-11 02:17:22] drwx------ 5 mark mark      4096 Oct 11 01:20 pilot3
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark       530 Oct 11 02:15 boinc_task_state.xml
[2025-10-11 02:17:22] -rw------- 1 mark mark 196629289 Oct 11 02:15 HITS.46676269._034168.pool.root.1
[2025-10-11 02:17:22] -rw------- 1 mark mark      1032 Oct 11 02:16 memory_monitor_summary.json
[2025-10-11 02:17:22] -rw------- 1 mark mark        95 Oct 11 02:16 pilot_heartbeat.json
[2025-10-11 02:17:22] -rw------- 1 mark mark    368821 Oct 11 02:16 log.46676269._034168.job.log.tgz.1
[2025-10-11 02:17:22] -rw------- 1 mark mark      7782 Oct 11 02:16 heartbeat.json
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark      8192 Oct 11 02:17 boinc_mmap_file
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark        27 Oct 11 02:17 wrapper_checkpoint.txt
[2025-10-11 02:17:22] -rw------- 1 mark mark      4904 Oct 11 02:17 pilotlog.txt
[2025-10-11 02:17:22] -rw------- 1 mark mark    508771 Oct 11 02:17 log.46676269._034168.job.log.1
[2025-10-11 02:17:22] -rw------- 1 mark mark       357 Oct 11 02:17 output.list
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark       620 Oct 11 02:17 runtime_log
[2025-10-11 02:17:22] -rw------- 1 mark mark    901120 Oct 11 02:17 result.tar.gz
[2025-10-11 02:17:22] -rw------- 1 mark mark       645 Oct 11 02:17 TqOKDmLEMR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmefcNDmIax6Lm.diag
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark      8759 Oct 11 02:17 runtime_log.err
[2025-10-11 02:17:22] -rw-rw-r-- 1 mark mark     22365 Oct 11 02:17 stderr.txt
[2025-10-11 02:17:22] HITS file was successfully produced:
[2025-10-11 02:17:22] -rw------- 1 mark mark 196629289 Oct 11 02:15 shared/HITS.pool.root.1
[2025-10-11 02:17:22]  *** Contents of shared directory: ***
[2025-10-11 02:17:22] total 411472
[2025-10-11 02:17:22] -rw-r--r-- 2 mark mark 223213236 Oct 11 01:19 ATLAS.root_0
[2025-10-11 02:17:22] -rw-r--r-- 2 mark mark     15120 Oct 11 01:19 start_atlas.sh
[2025-10-11 02:17:22] -rw-r--r-- 2 mark mark    569678 Oct 11 01:19 input.tar.gz
[2025-10-11 02:17:22] -rw------- 1 mark mark 196629289 Oct 11 02:15 HITS.pool.root.1
[2025-10-11 02:17:22] -rw------- 1 mark mark    901120 Oct 11 02:17 result.tar.gz
02:17:23 (1307567): run_atlas exited; CPU time 35366.243008
02:17:23 (1307567): called boinc_finish(0)

</stderr_txt>
]]>

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