Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:05:09 (2997993): wrapper (7.7.26015): starting
20:05:09 (2997993): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 20:05:09] Arguments: --nthreads 8
[2025-10-10 20:05:09] Threads: 8
[2025-10-10 20:05:09] Checking for CVMFS
[2025-10-10 20:05:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 20:05:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 20:05:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 20:05:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 20:05:10] 2.13.2.0 3269412 33544 369820 151565 3 675 28591318 40960001 46761 16776704 0 421189435 99.836 180041809 36807 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 20:05:10] CVMFS is ok
[2025-10-10 20:05:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 20:05:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 20:05:10] Further information can be found at the LHC@home message board.
[2025-10-10 20:05:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 20:05:10] Checking for apptainer binary...
[2025-10-10 20:05:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 20:05:10] Running /usr/bin/apptainer --version
[2025-10-10 20:05:10] apptainer version 1.4.3-1.el9
[2025-10-10 20:05:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 20:05:10] c8-16-2.aglt2.org
[2025-10-10 20:05:10] apptainer works
[2025-10-10 20:05:10] Set ATHENA_PROC_NUMBER=8
[2025-10-10 20:05:10] Set ATHENA_CORE_NUMBER=8
[2025-10-10 20:05:10] Starting ATLAS job with PandaID=6831073840
[2025-10-10 20:05:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 21:16:02]  *** The last 200 lines of the pilot log: ***
[2025-10-10 21:16:02] 2025-10-11 01:15:10,086 | INFO     | stage-out finished correctly
[2025-10-10 21:16:02] 2025-10-11 01:15:12,072 | INFO     | time since job start (4181s) is within the limit (172800.0s)
[2025-10-10 21:16:02] 2025-10-11 01:15:12,786 | WARNING  | process 3020573 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 21:16:02] 2025-10-11 01:15:12,786 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6831073840/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 21:16:02] 2025-10-11 01:15:13,056 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 21:16:02] 2025-10-11 01:15:13,452 | INFO     | job 6831073840 has state=finished
[2025-10-10 21:16:02] 2025-10-11 01:15:13,460 | INFO     | preparing for final server update for job 6831073840 in state='finished'
[2025-10-10 21:16:02] 2025-10-11 01:15:13,472 | INFO     | this job has now completed (state=finished)
[2025-10-10 21:16:02] 2025-10-11 01:15:13,480 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 21:16:02] 2025-10-11 01:15:13,484 | INFO     | log transfer has been attempted: DONE
[2025-10-10 21:16:02] 2025-10-11 01:15:13,484 | INFO     | job 6831073840 has finished - writing final server update
[2025-10-10 21:16:02] 2025-10-11 01:15:13,484 | INFO     | total number of processed events: 400 (read)
[2025-10-10 21:16:02] 2025-10-11 01:15:13,496 | INFO     | executing command: lscpu
[2025-10-10 21:16:02] 2025-10-11 01:15:13,597 | INFO     | number of running child processes to parent process 3020573: 1
[2025-10-10 21:16:02] 2025-10-11 01:15:13,597 | INFO     | maximum number of monitored processes: 6
[2025-10-10 21:16:02] 2025-10-11 01:15:13,605 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 21:16:02] 2025-10-11 01:15:14,083 | INFO     | time since job start (4183s) is within the limit (172800.0s)
[2025-10-10 21:16:02] 2025-10-11 01:15:16,090 | INFO     | time since job start (4185s) is within the limit (172800.0s)
[2025-10-10 21:16:02] 2025-10-11 01:15:16,106 | INFO     | monitor loop #277: job 0:6831073840 is in state 'finished'
[2025-10-10 21:16:02] 2025-10-11 01:15:16,106 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 21:16:02] 2025-10-11 01:15:18,097 | INFO     | time since job start (4187s) is within the limit (172800.0s)
[2025-10-10 21:16:02] 2025-10-11 01:15:18,611 | INFO     | monitor loop #278: job 0:6831073840 is in state 'finished'
[2025-10-10 21:16:02] 2025-10-11 01:15:18,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 21:16:02] 2025-10-11 01:15:20,104 | INFO     | time since job start (4189s) is within the limit (172800.0s)
[2025-10-10 21:16:02] 2025-10-11 01:15:21,119 | INFO     | monitor loop #279: job 0:6831073840 is in state 'finished'
[2025-10-10 21:16:02] 2025-10-11 01:15:21,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 21:16:02] 2025-10-11 01:15:22,111 | INFO     | time since job start (4191s) is within the limit (172800.0s)
[2025-10-10 21:16:02] 2025-10-11 01:15:22,111 | INFO     | 4193s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-10 21:16:02] 2025-10-11 01:15:23,624 | INFO     | monitor loop #280: job 0:6831073840 is in state 'finished'
[2025-10-10 21:16:02] 2025-10-11 01:15:23,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 21:16:02] 2025-10-11 01:15:24,118 | INFO     | time since job start (4193s) is within the limit (172800.0s)
[2025-10-10 21:16:02] 2025-10-11 01:15:26,125 | INFO     | time since job start (4195s) is within the limit (172800.0s)
[2025-10-10 21:16:02] 2025-10-11 01:15:26,128 | INFO     | monitor loop #281: job 0:6831073840 is in state 'finished'
[2025-10-10 21:16:02] 2025-10-11 01:15:26,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 21:16:02] 2025-10-11 01:15:28,123 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 21:16:02] 2025-10-11 01:15:28,131 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9890859374977
[2025-10-10 21:16:02] 2025-10-11 01:15:28,132 | INFO     | time since job start (4197s) is within the limit (172800.0s)
[2025-10-10 21:16:02] 2025-10-11 01:15:28,148 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6831073840/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 21:16:02] 2025-10-11 01:15:28,148 | INFO     | extracted standard info from prmon json
[2025-10-10 21:16:02] 2025-10-11 01:15:28,148 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 21:16:02] 2025-10-11 01:15:28,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 21:16:02] 2025-10-11 01:15:28,149 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 21:16:02] 2025-10-11 01:15:28,149 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 21:16:02] 2025-10-11 01:15:28,150 | INFO     | fitting pss+swap vs Time
[2025-10-10 21:16:02] 2025-10-11 01:15:28,150 | INFO     | sum of square deviations: 70364110.0
[2025-10-10 21:16:02] 2025-10-11 01:15:28,150 | INFO     | sum of deviations: -154557163.99999997
[2025-10-10 21:16:02] 2025-10-11 01:15:28,150 | INFO     | mean x: 1760143341.0
[2025-10-10 21:16:02] 2025-10-11 01:15:28,150 | INFO     | mean y: 2169119.8524590163
[2025-10-10 21:16:02] 2025-10-11 01:15:28,150 | INFO     | -- intersect: 3868383913.423285
[2025-10-10 21:16:02] 2025-10-11 01:15:28,150 | INFO     | intersect: 3868383913.423285
[2025-10-10 21:16:02] 2025-10-11 01:15:28,150 | INFO     | chi2: 0.008522237548498582
[2025-10-10 21:16:02] 2025-10-11 01:15:28,150 | INFO     | -- intersect: 3868383913.423285
[2025-10-10 21:16:02] 2025-10-11 01:15:28,150 | INFO     | current memory leak: -2.20 B/s (using 61 data points, chi2=0.01)
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | ..............................
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | . Timing measurements:
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | . get job = 0 s
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | . initial setup = 2 s
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | . payload setup = 22 s
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | . stage-in = 0 s
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | . payload execution = 4117 s
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | . stage-out = 0 s
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | . log creation = 0 s
[2025-10-10 21:16:02] 2025-10-11 01:15:28,151 | INFO     | ..............................
[2025-10-10 21:16:02] 2025-10-11 01:15:28,212 | INFO     | 
[2025-10-10 21:16:02] 2025-10-11 01:15:28,212 | INFO     | job summary report
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | --------------------------------------------------
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | PanDA job id: 6831073840
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | task id: 46376905
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | errors: (none)
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | pilot state: finished 
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | transexitcode: 0
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | exeerrorcode: 0
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | exeerrordiag: 
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | exitcode: 0
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | exitmsg: OK
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | cpuconsumptiontime: 19998 s
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | nevents: 400
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | neventsw: 0
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | pid: 3020573
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | pgrp: 3020573
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | corecount: 8
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | event service: False
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | sizes: {0: 2347988, 1: 2348844, 12: 2348844, 13: 2349134, 23: 2349190, 4143: 2375239, 4144: 2384237, 4147: 2384293, 4162: 2384487}
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | --------------------------------------------------
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | 
[2025-10-10 21:16:02] 2025-10-11 01:15:28,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 21:16:02] 2025-10-11 01:15:28,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 21:16:02] 2025-10-11 01:15:28,233 | INFO     | job 6831073840 has completed (purged errors)
[2025-10-10 21:16:02] 2025-10-11 01:15:28,233 | INFO     | overall cleanup function is called
[2025-10-10 21:16:02] 2025-10-11 01:15:29,243 | INFO     | --- collectZombieJob: --- 10, [3020573]
[2025-10-10 21:16:02] 2025-10-11 01:15:29,243 | INFO     | zombie collector waiting for pid 3020573
[2025-10-10 21:16:02] 2025-10-11 01:15:29,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 21:16:02] 2025-10-11 01:15:29,243 | INFO     | collected zombie processes
[2025-10-10 21:16:02] 2025-10-11 01:15:29,243 | INFO     | will attempt to kill all subprocesses of pid=3020573
[2025-10-10 21:16:02] 2025-10-11 01:15:30,174 | INFO     | process IDs to be killed: [3020573] (in reverse order)
[2025-10-10 21:16:02] 2025-10-11 01:15:30,651 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 21:16:02] 2025-10-11 01:15:30,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 21:16:02] 2025-10-11 01:15:30,705 | INFO     | did not find any defunct processes belonging to 3020573
[2025-10-10 21:16:02] 2025-10-11 01:15:30,805 | INFO     | did not find any defunct processes belonging to 3020573
[2025-10-10 21:16:02] 2025-10-11 01:15:30,806 | INFO     | ready for new job
[2025-10-10 21:16:02] 2025-10-11 01:15:30,807 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 21:16:02] 2025-10-11 01:15:30,809 | INFO     | ***************************************
[2025-10-10 21:16:02] 2025-10-11 01:15:30,810 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 21:16:02] 2025-10-11 01:15:30,810 | INFO     | ***************************************
[2025-10-10 21:16:02] 2025-10-11 01:15:30,810 | INFO     | 
[2025-10-10 21:16:02] 2025-10-11 01:15:30,838 | INFO     | architecture information:
[2025-10-10 21:16:02] 2025-10-11 01:15:30,839 | INFO     | executing command: cat /etc/os-release
[2025-10-10 21:16:02] 2025-10-11 01:15:30,868 | INFO     | cat /etc/os-release:
[2025-10-10 21:16:02] NAME="CentOS Linux"
[2025-10-10 21:16:02] VERSION="7 (Core)"
[2025-10-10 21:16:02] ID="centos"
[2025-10-10 21:16:02] ID_LIKE="rhel fedora"
[2025-10-10 21:16:02] VERSION_ID="7"
[2025-10-10 21:16:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 21:16:02] ANSI_COLOR="0;31"
[2025-10-10 21:16:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 21:16:02] HOME_URL="https://www.centos.org/"
[2025-10-10 21:16:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 21:16:02] 
[2025-10-10 21:16:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 21:16:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 21:16:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 21:16:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 21:16:02] 
[2025-10-10 21:16:02] 2025-10-11 01:15:30,869 | INFO     | ***************************************
[2025-10-10 21:16:02] 2025-10-11 01:15:31,372 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-10 21:16:02] 2025-10-11 01:15:31,397 | INFO     | sufficient remaining disk space (167157694464 B)
[2025-10-10 21:16:02] 2025-10-11 01:15:31,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 21:16:02] 2025-10-11 01:15:31,397 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 21:16:02] 2025-10-11 01:15:31,397 | INFO     | update_server=False
[2025-10-10 21:16:02] 2025-10-11 01:15:31,397 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 21:16:02] 2025-10-11 01:15:31,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 21:16:02] 2025-10-11 01:15:31,762 | INFO     | all job control threads have been joined
[2025-10-10 21:16:02] 2025-10-11 01:15:31,905 | INFO     | all data control threads have been joined
[2025-10-10 21:16:02] 2025-10-11 01:15:32,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:16:02] 2025-10-11 01:15:32,168 | INFO     | aborting loop
[2025-10-10 21:16:02] 2025-10-11 01:15:32,417 | INFO     | [job] retrieve thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:32,489 | INFO     | [job] validate thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:32,665 | INFO     | [payload] validate_post thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:32,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 21:16:02] 2025-10-11 01:15:32,704 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:32,768 | INFO     | [job] control thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:32,828 | INFO     | all payload control threads have been joined
[2025-10-10 21:16:02] 2025-10-11 01:15:32,911 | INFO     | [data] control thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:33,174 | INFO     | [job] job monitor thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:33,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:16:02] 2025-10-11 01:15:33,275 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:33,365 | INFO     | [data] copytool_in thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:33,421 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:33,429 | INFO     | [data] copytool_out thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:33,715 | INFO     | [payload] failed_post thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:33,834 | INFO     | [payload] control thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:34,239 | INFO     | [job] queue monitor thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:36,697 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:37,823 | INFO     | [monitor] cgroup control has ended
[2025-10-10 21:16:02] 2025-10-11 01:15:41,510 | INFO     | job.realtimelogging is not enabled
[2025-10-10 21:16:02] 2025-10-11 01:15:42,516 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 21:16:02] 2025-10-11 01:15:42,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140021737031488)>', '<ExcThread(monitor, started 140020983764736)>']
[2025-10-10 21:16:02] 2025-10-11 01:15:47,800 | INFO     | all workflow threads have been joined
[2025-10-10 21:16:02] 2025-10-11 01:15:47,800 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 21:16:02] 2025-10-11 01:15:47,800 | INFO     | traces error code: 0
[2025-10-10 21:16:02] 2025-10-11 01:15:47,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 21:16:02] 2025-10-11 01:16:02,210 | INFO     | PID=3010819 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 21:16:02] 2025-10-11 01:16:02,210 | INFO     | .. there are 67 such processes running
[2025-10-10 21:16:02] 2025-10-11 01:16:02,211 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 21:16:02] 2025-10-11 01:16:02,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 21:16:02] 2025-10-11 01:16:02,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 21:16:02] 2025-10-11 01:16:02,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 21:16:02] 2025-10-11 01:16:02,211 | INFO     | [monitor] control thread has ended
[2025-10-10 21:16:02] 2025-10-11 01:16:02,358 [wrapper] ==== pilot stdout END ====
[2025-10-10 21:16:02] 2025-10-11 01:16:02,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 21:16:02] 2025-10-11 01:16:02,417 [wrapper] pilotpid: 3010819
[2025-10-10 21:16:02] 2025-10-11 01:16:02,420 [wrapper] Pilot exit status: 0
[2025-10-10 21:16:02] 2025-10-11 01:16:02,487 [wrapper] pandaids: 6831073840
[2025-10-10 21:16:02] 2025-10-11 01:16:02,699 [wrapper] cleanup supervisor_pilot 3725183 3010820
[2025-10-10 21:16:02] 2025-10-11 01:16:02,704 [wrapper] Test setup, not cleaning
[2025-10-10 21:16:02] 2025-10-11 01:16:02,719 [wrapper] apfmon messages muted
[2025-10-10 21:16:02] 2025-10-11 01:16:02,722 [wrapper] ==== wrapper stdout END ====
[2025-10-10 21:16:02] 2025-10-11 01:16:02,741 [wrapper] ==== wrapper stderr END ====
[2025-10-10 21:16:02]  *** Error codes and diagnostics ***
[2025-10-10 21:16:02]     "exeErrorCode": 0,
[2025-10-10 21:16:02]     "exeErrorDiag": "",
[2025-10-10 21:16:02]     "pilotErrorCode": 0,
[2025-10-10 21:16:02]     "pilotErrorDiag": "",
[2025-10-10 21:16:02]  *** Listing of results directory ***
[2025-10-10 21:16:02] total 393212
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 02:57 pilot3.tar.gz
[2025-10-10 21:16:02] -rwx------. 1 boincer umatlas     36292 Oct  5 03:19 runpilot2-wrapper.sh
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 03:19 queuedata.json
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas       100 Oct 10 20:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 21:16:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 20:05 run_atlas
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas       105 Oct 10 20:05 job.xml
[2025-10-10 21:16:02] -rw-r--r--. 2 boincer umatlas 217405810 Oct 10 20:05 EVNT.46376901._002865.pool.root.1
[2025-10-10 21:16:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 20:05 start_atlas.sh
[2025-10-10 21:16:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 20:05 shared
[2025-10-10 21:16:02] -rw-r--r--. 2 boincer umatlas    565600 Oct 10 20:05 input.tar.gz
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas         0 Oct 10 20:05 boinc_lockfile
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas      2519 Oct 10 20:05 pandaJob.out
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas    975525 Oct 10 20:05 agis_schedconf.cvmfs.json
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas   1560580 Oct 10 20:05 agis_ddmendpoints.agis.ALL.json
[2025-10-10 21:16:02] drwx------. 4 boincer umatlas      4096 Oct 10 20:05 pilot3
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas      7161 Oct 10 21:12 init_data.xml
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas       530 Oct 10 21:14 boinc_task_state.xml
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas 179530072 Oct 10 21:14 HITS.46376905._078411.pool.root.1
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas      1035 Oct 10 21:15 memory_monitor_summary.json
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas    328973 Oct 10 21:15 log.46376905._078411.job.log.tgz.1
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas      7776 Oct 10 21:15 heartbeat.json
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas        27 Oct 10 21:16 wrapper_checkpoint.txt
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas        95 Oct 10 21:16 pilot_heartbeat.json
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas       823 Oct 10 21:16 pilotlog.txt
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 21:16 boinc_mmap_file
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas    580702 Oct 10 21:16 log.46376905._078411.job.log.1
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas       357 Oct 10 21:16 output.list
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas       620 Oct 10 21:16 runtime_log
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas    931840 Oct 10 21:16 result.tar.gz
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas      8698 Oct 10 21:16 runtime_log.err
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas       651 Oct 10 21:16 ghlKDmMDYP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmLaFMDmwmkGPm.diag
[2025-10-10 21:16:02] -rw-r--r--. 1 boincer umatlas     22179 Oct 10 21:16 stderr.txt
[2025-10-10 21:16:02] HITS file was successfully produced:
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas 179530072 Oct 10 21:14 shared/HITS.pool.root.1
[2025-10-10 21:16:02]  *** Contents of shared directory: ***
[2025-10-10 21:16:02] total 389128
[2025-10-10 21:16:02] -rw-r--r--. 2 boincer umatlas 217405810 Oct 10 20:05 ATLAS.root_0
[2025-10-10 21:16:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 20:05 start_atlas.sh
[2025-10-10 21:16:02] -rw-r--r--. 2 boincer umatlas    565600 Oct 10 20:05 input.tar.gz
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas 179530072 Oct 10 21:14 HITS.pool.root.1
[2025-10-10 21:16:02] -rw-------. 1 boincer umatlas    931840 Oct 10 21:16 result.tar.gz
21:16:04 (2997993): run_atlas exited; CPU time 20175.454004
21:16:04 (2997993): called boinc_finish(0)

</stderr_txt>
]]>

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