Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:05:23 (3055164): wrapper (7.7.26015): starting
20:05:23 (3055164): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 20:05:23] Arguments: --nthreads 12
[2025-10-10 20:05:23] Threads: 12
[2025-10-10 20:05:23] Checking for CVMFS
[2025-10-10 20:05:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 20:05:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 20:05:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 20:05:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 20:05:24] 2.13.2.0 135553 2010 116708 151565 2 445 26964916 32503809 7493 16776704 0 34289181 99.973 2491707 52187 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 20:05:24] CVMFS is ok
[2025-10-10 20:05:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 20:05:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 20:05:24] Further information can be found at the LHC@home message board.
[2025-10-10 20:05:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 20:05:24] Checking for apptainer binary...
[2025-10-10 20:05:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 20:05:24] Running /usr/bin/apptainer --version
[2025-10-10 20:05:24] apptainer version 1.4.3-1.el9
[2025-10-10 20:05:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 20:05:24] c8-7-2.aglt2.org
[2025-10-10 20:05:24] apptainer works
[2025-10-10 20:05:24] Set ATHENA_PROC_NUMBER=12
[2025-10-10 20:05:24] Set ATHENA_CORE_NUMBER=12
[2025-10-10 20:05:24] Starting ATLAS job with PandaID=6837631155
[2025-10-10 20:05:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 20:34:41]  *** The last 200 lines of the pilot log: ***
[2025-10-10 20:34:41]  mtime=0
[2025-10-10 20:34:41]  protocol_id=None
[2025-10-10 20:34:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 20:34:41]  replicas=None
[2025-10-10 20:34:41]  scope=mc23_13p6TeV
[2025-10-10 20:34:41]  status=None
[2025-10-10 20:34:41]  status_code=0
[2025-10-10 20:34:41]  storage_token=
[2025-10-10 20:34:41]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6837631155/log.46676269._039633.job.log.tgz.1
[2025-10-10 20:34:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/f6/log.46676269._039633.job.log.tgz.1
[2025-10-10 20:34:41]  workdir=None
[2025-10-10 20:34:41] ]
[2025-10-10 20:34:41] 2025-10-11 00:33:51,359 | INFO     | transferring file log.46676269._039633.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6837631155/log.46676269._039633.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 20:34:41] 2025-10-11 00:33:51,359 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6837631155/log.46676269._039633.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._039633.job
[2025-10-10 20:34:41] 2025-10-11 00:33:51,377 | INFO     | adding to output.list: log.46676269._039633.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/f6/log.46676269._039633.job.log.tg
[2025-10-10 20:34:41] 2025-10-11 00:33:51,378 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 20:34:41] 2025-10-11 00:33:51,378 | INFO     | summary of transferred files:
[2025-10-10 20:34:41] 2025-10-11 00:33:51,378 | INFO     |  -- lfn=log.46676269._039633.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 20:34:41] 2025-10-11 00:33:51,378 | INFO     | stage-out finished correctly
[2025-10-10 20:34:41] 2025-10-11 00:33:52,128 | INFO     | time since job start (1699s) is within the limit (172800.0s)
[2025-10-10 20:34:41] 2025-10-11 00:33:52,685 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 20:34:41] 2025-10-11 00:33:53,664 | INFO     | job 6837631155 has state=finished
[2025-10-10 20:34:41] 2025-10-11 00:33:53,664 | INFO     | preparing for final server update for job 6837631155 in state='finished'
[2025-10-10 20:34:41] 2025-10-11 00:33:53,665 | INFO     | this job has now completed (state=finished)
[2025-10-10 20:34:41] 2025-10-11 00:33:53,665 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 20:34:41] 2025-10-11 00:33:53,665 | INFO     | log transfer has been attempted: DONE
[2025-10-10 20:34:41] 2025-10-11 00:33:53,665 | INFO     | job 6837631155 has finished - writing final server update
[2025-10-10 20:34:41] 2025-10-11 00:33:53,665 | INFO     | total number of processed events: 400 (read)
[2025-10-10 20:34:41] 2025-10-11 00:33:53,666 | INFO     | executing command: lscpu
[2025-10-10 20:34:41] 2025-10-11 00:33:53,720 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 20:34:41] 2025-10-11 00:33:54,132 | INFO     | time since job start (1701s) is within the limit (172800.0s)
[2025-10-10 20:34:41] 2025-10-11 00:33:54,875 | WARNING  | process 3065929 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 20:34:41] 2025-10-11 00:33:54,875 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837631155/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 20:34:41] 2025-10-11 00:33:55,275 | INFO     | number of running child processes to parent process 3065929: 1
[2025-10-10 20:34:41] 2025-10-11 00:33:55,275 | INFO     | maximum number of monitored processes: 6
[2025-10-10 20:34:41] 2025-10-11 00:33:56,138 | INFO     | time since job start (1703s) is within the limit (172800.0s)
[2025-10-10 20:34:41] 2025-10-11 00:33:56,578 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 20:34:41] 2025-10-11 00:33:56,582 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3525.1419531249962
[2025-10-10 20:34:41] 2025-10-11 00:33:56,590 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837631155/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 20:34:41] 2025-10-11 00:33:56,590 | INFO     | extracted standard info from prmon json
[2025-10-10 20:34:41] 2025-10-11 00:33:56,590 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 20:34:41] 2025-10-11 00:33:56,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 20:34:41] 2025-10-11 00:33:56,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 20:34:41] 2025-10-11 00:33:56,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 20:34:41] 2025-10-11 00:33:56,591 | INFO     | fitting pss+swap vs Time
[2025-10-10 20:34:41] 2025-10-11 00:33:56,591 | INFO     | sum of square deviations: 2865170.0
[2025-10-10 20:34:41] 2025-10-11 00:33:56,591 | INFO     | sum of deviations: -4321117.999999994
[2025-10-10 20:34:41] 2025-10-11 00:33:56,591 | INFO     | mean x: 1760142072.0
[2025-10-10 20:34:41] 2025-10-11 00:33:56,591 | INFO     | mean y: 2387335.095238095
[2025-10-10 20:34:41] 2025-10-11 00:33:56,591 | INFO     | -- intersect: 2656952889.6265526
[2025-10-10 20:34:41] 2025-10-11 00:33:56,591 | INFO     | intersect: 2656952889.6265526
[2025-10-10 20:34:41] 2025-10-11 00:33:56,591 | INFO     | chi2: 0.002073508357180199
[2025-10-10 20:34:41] 2025-10-11 00:33:56,591 | INFO     | -- intersect: 2656952889.6265526
[2025-10-10 20:34:41] 2025-10-11 00:33:56,591 | INFO     | current memory leak: -1.51 B/s (using 21 data points, chi2=0.00)
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | could have reported an average CPU frequency of 3561 MHz (4 samples)
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | ..............................
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | . Timing measurements:
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | . get job = 0 s
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | . initial setup = 2 s
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | . payload setup = 4 s
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | . stage-in = 0 s
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | . payload execution = 1674 s
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | . stage-out = 0 s
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | . log creation = 0 s
[2025-10-10 20:34:41] 2025-10-11 00:33:56,592 | INFO     | ..............................
[2025-10-10 20:34:41] 2025-10-11 00:33:57,092 | INFO     | 
[2025-10-10 20:34:41] 2025-10-11 00:33:57,092 | INFO     | job summary report
[2025-10-10 20:34:41] 2025-10-11 00:33:57,092 | INFO     | --------------------------------------------------
[2025-10-10 20:34:41] 2025-10-11 00:33:57,092 | INFO     | PanDA job id: 6837631155
[2025-10-10 20:34:41] 2025-10-11 00:33:57,092 | INFO     | task id: 46676269
[2025-10-10 20:34:41] 2025-10-11 00:33:57,092 | INFO     | errors: (none)
[2025-10-10 20:34:41] 2025-10-11 00:33:57,092 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 20:34:41] 2025-10-11 00:33:57,092 | INFO     | pilot state: finished 
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | transexitcode: 0
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | exeerrorcode: 0
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | exeerrordiag: 
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | exitcode: 0
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | exitmsg: OK
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | cpuconsumptiontime: 17485 s
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | nevents: 400
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | neventsw: 0
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | pid: 3065929
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | pgrp: 3065929
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | corecount: 12
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | event service: False
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | sizes: {0: 2348857, 1: 2348857, 4: 2349147, 11: 2349175, 1682: 2374043, 1683: 2383041, 1685: 2383225, 1689: 2383419}
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | --------------------------------------------------
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | 
[2025-10-10 20:34:41] 2025-10-11 00:33:57,093 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 20:34:41] 2025-10-11 00:33:57,108 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,108 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,108 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | job 6837631155 has completed (purged errors)
[2025-10-10 20:34:41] 2025-10-11 00:33:57,109 | INFO     | overall cleanup function is called
[2025-10-10 20:34:41] 2025-10-11 00:33:58,117 | INFO     | --- collectZombieJob: --- 10, [3065929]
[2025-10-10 20:34:41] 2025-10-11 00:33:58,117 | INFO     | zombie collector waiting for pid 3065929
[2025-10-10 20:34:41] 2025-10-11 00:33:58,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 20:34:41] 2025-10-11 00:33:58,117 | INFO     | collected zombie processes
[2025-10-10 20:34:41] 2025-10-11 00:33:58,117 | INFO     | will attempt to kill all subprocesses of pid=3065929
[2025-10-10 20:34:41] 2025-10-11 00:33:58,388 | INFO     | process IDs to be killed: [3065929] (in reverse order)
[2025-10-10 20:34:41] 2025-10-11 00:33:58,483 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 20:34:41] 2025-10-11 00:33:58,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 20:34:41] 2025-10-11 00:33:58,496 | INFO     | did not find any defunct processes belonging to 3065929
[2025-10-10 20:34:41] 2025-10-11 00:33:58,506 | INFO     | did not find any defunct processes belonging to 3065929
[2025-10-10 20:34:41] 2025-10-11 00:33:58,506 | INFO     | ready for new job
[2025-10-10 20:34:41] 2025-10-11 00:33:58,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 20:34:41] 2025-10-11 00:33:58,507 | INFO     | ***************************************
[2025-10-10 20:34:41] 2025-10-11 00:33:58,507 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 20:34:41] 2025-10-11 00:33:58,507 | INFO     | ***************************************
[2025-10-10 20:34:41] 2025-10-11 00:33:58,507 | INFO     | 
[2025-10-10 20:34:41] 2025-10-11 00:33:58,522 | INFO     | architecture information:
[2025-10-10 20:34:41] 2025-10-11 00:33:58,523 | INFO     | executing command: cat /etc/os-release
[2025-10-10 20:34:41] 2025-10-11 00:33:58,530 | INFO     | cat /etc/os-release:
[2025-10-10 20:34:41] NAME="CentOS Linux"
[2025-10-10 20:34:41] VERSION="7 (Core)"
[2025-10-10 20:34:41] ID="centos"
[2025-10-10 20:34:41] ID_LIKE="rhel fedora"
[2025-10-10 20:34:41] VERSION_ID="7"
[2025-10-10 20:34:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 20:34:41] ANSI_COLOR="0;31"
[2025-10-10 20:34:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 20:34:41] HOME_URL="https://www.centos.org/"
[2025-10-10 20:34:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 20:34:41] 
[2025-10-10 20:34:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 20:34:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 20:34:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 20:34:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 20:34:41] 
[2025-10-10 20:34:41] 2025-10-11 00:33:58,530 | INFO     | ***************************************
[2025-10-10 20:34:41] 2025-10-11 00:33:59,033 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 20:34:41] 2025-10-11 00:33:59,048 | INFO     | sufficient remaining disk space (90728038400 B)
[2025-10-10 20:34:41] 2025-10-11 00:33:59,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 20:34:41] 2025-10-11 00:33:59,048 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 20:34:41] 2025-10-11 00:33:59,049 | INFO     | update_server=False
[2025-10-10 20:34:41] 2025-10-11 00:33:59,049 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 20:34:41] 2025-10-11 00:33:59,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 20:34:41] 2025-10-11 00:33:59,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 20:34:41] 2025-10-11 00:33:59,050 | INFO     | aborting loop
[2025-10-10 20:34:41] 2025-10-11 00:33:59,058 | INFO     | all data control threads have been joined
[2025-10-10 20:34:41] 2025-10-11 00:33:59,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 20:34:41] 2025-10-11 00:33:59,559 | INFO     | all job control threads have been joined
[2025-10-10 20:34:41] 2025-10-11 00:34:00,054 | INFO     | [job] retrieve thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:00,055 | INFO     | [job] job monitor thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:00,061 | INFO     | [data] control thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:00,261 | INFO     | all payload control threads have been joined
[2025-10-10 20:34:41] 2025-10-11 00:34:00,522 | INFO     | [data] copytool_in thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:00,565 | INFO     | [job] control thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:00,590 | INFO     | [payload] validate_post thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:00,845 | INFO     | [payload] failed_post thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:00,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:01,115 | INFO     | [job] validate thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:01,266 | INFO     | [payload] control thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:01,274 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:01,368 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:01,440 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:01,445 | INFO     | [data] copytool_out thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:01,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 20:34:41] 2025-10-11 00:34:02,639 | INFO     | [job] queue monitor thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:03,055 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 20:34:41] 2025-10-11 00:34:29,737 | INFO     | PID=3058893 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 20:34:41] 2025-10-11 00:34:29,737 | INFO     | .. there are 9 such processes running
[2025-10-10 20:34:41] 2025-10-11 00:34:29,738 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 20:34:41] 2025-10-11 00:34:29,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 20:34:41] 2025-10-11 00:34:29,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 20:34:41] 2025-10-11 00:34:35,024 | INFO     | [monitor] cgroup control has ended
[2025-10-10 20:34:41] 2025-10-11 00:34:36,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140195823306560)>', '<ExcThread(monitor, started 140195114514176)>']
[2025-10-10 20:34:41] 2025-10-11 00:34:36,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 20:34:41] 2025-10-11 00:34:36,770 | INFO     | [monitor] control thread has ended
[2025-10-10 20:34:41] 2025-10-11 00:34:41,272 | INFO     | all workflow threads have been joined
[2025-10-10 20:34:41] 2025-10-11 00:34:41,273 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 20:34:41] 2025-10-11 00:34:41,273 | INFO     | traces error code: 0
[2025-10-10 20:34:41] 2025-10-11 00:34:41,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 20:34:41] 2025-10-11 00:34:41,400 [wrapper] ==== pilot stdout END ====
[2025-10-10 20:34:41] 2025-10-11 00:34:41,402 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 20:34:41] 2025-10-11 00:34:41,405 [wrapper] pilotpid: 3058893
[2025-10-10 20:34:41] 2025-10-11 00:34:41,407 [wrapper] Pilot exit status: 0
[2025-10-10 20:34:41] 2025-10-11 00:34:41,414 [wrapper] pandaids: 6837631155
[2025-10-10 20:34:41] 2025-10-11 00:34:41,511 [wrapper] cleanup supervisor_pilot 3186262 3058894
[2025-10-10 20:34:41] 2025-10-11 00:34:41,512 [wrapper] Test setup, not cleaning
[2025-10-10 20:34:41] 2025-10-11 00:34:41,514 [wrapper] apfmon messages muted
[2025-10-10 20:34:41] 2025-10-11 00:34:41,516 [wrapper] ==== wrapper stdout END ====
[2025-10-10 20:34:41] 2025-10-11 00:34:41,517 [wrapper] ==== wrapper stderr END ====
[2025-10-10 20:34:41]  *** Error codes and diagnostics ***
[2025-10-10 20:34:41]     "exeErrorCode": 0,
[2025-10-10 20:34:41]     "exeErrorDiag": "",
[2025-10-10 20:34:41]     "pilotErrorCode": 0,
[2025-10-10 20:34:41]     "pilotErrorDiag": "",
[2025-10-10 20:34:41]  *** Listing of results directory ***
[2025-10-10 20:34:41] total 410720
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 10:05 pilot3.tar.gz
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 10:06 queuedata.json
[2025-10-10 20:34:41] -rwx------. 1 boincer umatlas     36292 Oct 10 10:07 runpilot2-wrapper.sh
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas       100 Oct 10 20:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 20:34:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 20:05 run_atlas
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas       105 Oct 10 20:05 job.xml
[2025-10-10 20:34:41] -rw-r--r--. 2 boincer umatlas 218240073 Oct 10 20:05 EVNT.46676267._001608.pool.root.1
[2025-10-10 20:34:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 20:05 start_atlas.sh
[2025-10-10 20:34:41] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 20:05 shared
[2025-10-10 20:34:41] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 20:05 input.tar.gz
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas         0 Oct 10 20:05 boinc_lockfile
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 20:05 pandaJob.out
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas    975525 Oct 10 20:05 agis_schedconf.cvmfs.json
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas   1560580 Oct 10 20:05 agis_ddmendpoints.agis.ALL.json
[2025-10-10 20:34:41] drwx------. 5 boincer umatlas      4096 Oct 10 20:05 pilot3
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas      7161 Oct 10 20:29 init_data.xml
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas       529 Oct 10 20:33 boinc_task_state.xml
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas 197180682 Oct 10 20:33 HITS.46676269._039633.pool.root.1
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas      1032 Oct 10 20:33 memory_monitor_summary.json
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas    343983 Oct 10 20:33 log.46676269._039633.job.log.tgz.1
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas      7775 Oct 10 20:33 heartbeat.json
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas        95 Oct 10 20:34 pilot_heartbeat.json
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 20:34 boinc_mmap_file
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas        27 Oct 10 20:34 wrapper_checkpoint.txt
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas      4823 Oct 10 20:34 pilotlog.txt
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas    284541 Oct 10 20:34 log.46676269._039633.job.log.1
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas       357 Oct 10 20:34 output.list
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas       620 Oct 10 20:34 runtime_log
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas    645120 Oct 10 20:34 result.tar.gz
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas      8695 Oct 10 20:34 runtime_log.err
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas       649 Oct 10 20:34 gaZMDm1wSR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgWdNDm8Y85fn.diag
[2025-10-10 20:34:41] -rw-r--r--. 1 boincer umatlas     21718 Oct 10 20:34 stderr.txt
[2025-10-10 20:34:41] HITS file was successfully produced:
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas 197180682 Oct 10 20:33 shared/HITS.pool.root.1
[2025-10-10 20:34:41]  *** Contents of shared directory: ***
[2025-10-10 20:34:41] total 406900
[2025-10-10 20:34:41] -rw-r--r--. 2 boincer umatlas 218240073 Oct 10 20:05 ATLAS.root_0
[2025-10-10 20:34:41] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 20:05 start_atlas.sh
[2025-10-10 20:34:41] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 20:05 input.tar.gz
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas 197180682 Oct 10 20:33 HITS.pool.root.1
[2025-10-10 20:34:41] -rw-------. 1 boincer umatlas    645120 Oct 10 20:34 result.tar.gz
20:34:42 (3055164): run_atlas exited; CPU time 17524.878525
20:34:42 (3055164): called boinc_finish(0)

</stderr_txt>
]]>

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