Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 18:15:12 (19324): vboxwrapper version 26210
2025-10-12 18:15:12 (19324): BOINC client version: 8.2.4
2025-10-12 18:15:12 (19324): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-10-12 18:15:12 (19324): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 18:15:13 (19324): Create VM. (boinc_d20229523d074c63, slot#1)
2025-10-12 18:15:13 (19324): Setting Memory Size for VM. (4400MB)
2025-10-12 18:15:13 (19324): Setting CPU Count for VM. (4)
2025-10-12 18:15:14 (19324): Setting Chipset Options for VM.
2025-10-12 18:15:14 (19324): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 18:15:14 (19324): Setting Boot Options for VM.
2025-10-12 18:15:15 (19324): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 18:15:15 (19324): Enabling VM Network Access.
2025-10-12 18:15:15 (19324): Disabling USB Support for VM.
2025-10-12 18:15:16 (19324): Disabling COM Port Support for VM.
2025-10-12 18:15:16 (19324): Disabling LPT Port Support for VM.
2025-10-12 18:15:16 (19324): Disabling Audio Support for VM.
2025-10-12 18:15:16 (19324): Disabling Clipboard Support for VM.
2025-10-12 18:15:17 (19324): Disabling Drag and Drop Support for VM.
2025-10-12 18:15:17 (19324): Adding storage controller(s) to VM.
2025-10-12 18:15:17 (19324): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 18:15:19 (19324): Adding VirtualBox Guest Additions to VM.
2025-10-12 18:15:20 (19324): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 18:15:20 (19324): forwarding host port 65327 to guest port 80
2025-10-12 18:15:20 (19324): Enabling remote desktop for VM.
2025-10-12 18:15:21 (19324): Enabling shared directory for VM.
2025-10-12 18:15:21 (19324): Starting VM using VBoxManage interface. (boinc_d20229523d074c63, slot#1)
2025-10-12 18:15:28 (19324): Successfully started VM. (PID = '4508')
2025-10-12 18:15:28 (19324): Reporting VM Process ID to BOINC.
2025-10-12 18:15:28 (19324): Guest Log: BIOS: VirtualBox 7.1.8
2025-10-12 18:15:28 (19324): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 18:15:28 (19324): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 18:15:28 (19324): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 18:15:28 (19324): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 18:15:28 (19324): Detected: Web Application Enabled (http://localhost:65327)
2025-10-12 18:15:28 (19324): Detected: Remote Desktop Enabled (localhost:65328)
2025-10-12 18:15:28 (19324): Preference change detected
2025-10-12 18:15:28 (19324): Setting CPU throttle for VM. (100%)
2025-10-12 18:15:28 (19324): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 18:15:30 (19324): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 18:15:30 (19324): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 18:15:33 (19324): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 18:15:33 (19324): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 18:15:33 (19324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 18:15:41 (19324): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 18:15:41 (19324): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 18:15:49 (19324): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 18:15:49 (19324): Guest Log: 00:00:00.000180 main     Log opened 2025-10-12T18:15:47.688259000Z
2025-10-12 18:15:49 (19324): Guest Log: 00:00:00.000341 main     OS Product: Linux
2025-10-12 18:15:49 (19324): Guest Log: 00:00:00.000402 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 18:15:49 (19324): Guest Log: 00:00:00.000435 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 18:15:49 (19324): Guest Log: 00:00:00.000473 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 18:15:49 (19324): Guest Log: 00:00:00.000474 main     Process ID: 1313
2025-10-12 18:15:49 (19324): Guest Log: 00:00:00.000475 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 18:15:49 (19324): Guest Log: 00:00:00.002360 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 18:15:49 (19324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 18:15:49 (19324): Guest Log: [INFO] Mounting shared directory
2025-10-12 18:15:49 (19324): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 18:15:59 (19324): Guest Log: 00:00:10.005600 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 765 092 000ns (GuestNow=1 760 285 758 927 249 000 ns GuestLast=1 760 292 947 692 341 000 ns fSetTimeLastLoop=true )
2025-10-12 18:16:02 (19324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 18:16:02 (19324): Guest Log: [INFO] Detected branch: prod
2025-10-12 18:16:02 (19324): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 18:16:02 (19324): Guest Log: Copying input files
2025-10-12 18:16:04 (19324): Guest Log: Copied input files into RunAtlas.
2025-10-12 18:16:04 (19324): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 18:16:04 (19324): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 18:16:04 (19324): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 18:16:04 (19324): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 18:16:13 (19324): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 18:16:13 (19324): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 18:16:13 (19324): Guest Log: 2.6.3.0 1593 0 32212 151625 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 18:16:14 (19324): Guest Log: copied the webapp to /var/www
2025-10-12 18:16:14 (19324): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-12 18:16:14 (19324): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-12 18:16:14 (19324): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 18:16:14 (19324): Guest Log:  *** Starting ATLAS job. (PandaID=6837785743 taskID=46676269) ***
2025-10-12 19:57:54 (19324): Status Report: Elapsed Time: '6000.469341'
2025-10-12 19:57:54 (19324): Status Report: CPU Time: '21324.296875'
2025-10-12 21:44:50 (19324): Status Report: Elapsed Time: '12000.982115'
2025-10-12 21:44:50 (19324): Status Report: CPU Time: '46719.515625'
2025-10-12 23:29:02 (19324): Status Report: Elapsed Time: '18006.756598'
2025-10-12 23:29:05 (19324): Status Report: CPU Time: '71268.781250'
2025-10-12 23:55:23 (19324): Guest Log:  *** Job finished ***
2025-10-12 23:55:23 (19324): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:54:30,073 | INFO     | [data] queue_monitor thread has finished
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:54:30,074 | INFO     | [job] queue monitor thread has finished
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:14,625 | INFO     | [monitor] cgroup control has ended
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:16,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140390123493184)>', '<ExcThread(monitor, started 140389444998912)>']
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:17,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:17,309 | INFO     | [monitor] control thread has ended
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,342 | INFO     | all workflow threads have been joined
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,342 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,342 | INFO     | traces error code: 0
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,342 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,438 [wrapper] ==== pilot stdout END ====
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,444 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,450 [wrapper] pilotpid: 6018
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,456 [wrapper] Pilot exit status: 0
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,629 [wrapper] pandaids: 6837785743
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,676 [wrapper] cleanup supervisor_pilot 21739 6019
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,683 [wrapper] Test setup, not cleaning
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,692 [wrapper] apfmon messages muted
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,699 [wrapper] ==== wrapper stdout END ====
2025-10-12 23:55:23 (19324): Guest Log: 2025-10-12 21:55:21,707 [wrapper] ==== wrapper stderr END ====
2025-10-12 23:55:23 (19324): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 23:55:23 (19324): Guest Log:     "exeErrorCode": 0,
2025-10-12 23:55:23 (19324): Guest Log:     "exeErrorDiag": "",
2025-10-12 23:55:23 (19324): Guest Log:     "pilotErrorCode": 0,
2025-10-12 23:55:23 (19324): Guest Log:     "pilotErrorDiag": "",
2025-10-12 23:55:23 (19324): Guest Log:  *** Listing of results directory ***
2025-10-12 23:55:23 (19324): Guest Log: total 197300
2025-10-12 23:55:23 (19324): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 20:48 pilot3.tar.gz
2025-10-12 23:55:23 (19324): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 21:04 queuedata.json
2025-10-12 23:55:23 (19324): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 21:05 runpilot2-wrapper.sh
2025-10-12 23:55:23 (19324): Guest Log: -rwxr-xr-x. 1 atlas atlas      8729 Oct 12 16:16 init_data.xml
2025-10-12 23:55:23 (19324): Guest Log: -rwxr-xr-x. 1 atlas atlas    569680 Oct 12 16:16 input.tar.gz
2025-10-12 23:55:23 (19324): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 16:16 start_atlas.sh
2025-10-12 23:55:23 (19324): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 16:16 EVNT.46676267._001832.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 23:55:23 (19324): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 12 16:16 pandaJob.out
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas    975528 Oct 12 16:18 agis_schedconf.cvmfs.json
2025-10-12 23:55:23 (19324): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 16:18 pilot3
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 21:53 pilot_heartbeat.json
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas 191944588 Oct 12 21:53 HITS.46676269._045300.pool.root.1
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas      1031 Oct 12 21:53 memory_monitor_summary.json
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 21:54 agis_ddmendpoints.agis.ALL.json
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas    472105 Oct 12 21:54 log.46676269._045300.job.log.tgz.1
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas      7793 Oct 12 21:54 heartbeat.json
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas      4798 Oct 12 21:55 pilotlog.txt
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas   2656789 Oct 12 21:55 log.46676269._045300.job.log.1
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 21:55 output.list
2025-10-12 23:55:23 (19324): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 21:55 runtime_log
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas   3143680 Oct 12 21:55 result.tar.gz
2025-10-12 23:55:23 (19324): Guest Log: -rw-r--r--. 1 atlas atlas      8633 Oct 12 21:55 runtime_log.err
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas       659 Oct 12 21:55 A8tLDmgTZR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUbQMDmQ4M1km.diag
2025-10-12 23:55:23 (19324): Guest Log: Looking for outputfile HITS.46676269._045300.pool.root.1
2025-10-12 23:55:23 (19324): Guest Log: HITS file was successfully produced
2025-10-12 23:55:23 (19324): Guest Log: -rw-------. 1 atlas atlas 191944588 Oct 12 21:53 /home/atlas/RunAtlas/HITS.46676269._045300.pool.root.1
2025-10-12 23:55:25 (19324): Guest Log: Successfully finished the ATLAS job!
2025-10-12 23:55:25 (19324): Guest Log: Copying the results back to the shared directory!
2025-10-12 23:55:25 (19324): Guest Log:  *** Contents of shared directory: ***
2025-10-12 23:55:25 (19324): Guest Log: total 404228
2025-10-12 23:55:25 (19324): Guest Log: -rwxrwxrwx. 1 root root 218232162 Oct 12 16:15 ATLAS.root_0
2025-10-12 23:55:25 (19324): Guest Log: -rwxrwxrwx. 1 root root 191944588 Oct 12 21:55 HITS.pool.root.1
2025-10-12 23:55:25 (19324): Guest Log: -rwxrwxrwx. 1 root root      8729 Oct 12 16:15 init_data.xml
2025-10-12 23:55:25 (19324): Guest Log: -rwxrwxrwx. 1 root root    569680 Oct 10 23:25 input.tar.gz
2025-10-12 23:55:25 (19324): Guest Log: -rwxrwxrwx. 1 root root   3143680 Oct 12 21:55 result.tar.gz
2025-10-12 23:55:25 (19324): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 23:25 start_atlas.sh
2025-10-12 23:55:25 (19324): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 23:55:25 (19324): VM Completion File Detected.
2025-10-12 23:55:25 (19324): Powering off VM.
2025-10-12 23:55:26 (19324): Successfully stopped VM.
2025-10-12 23:55:26 (19324): Deregistering VM. (boinc_d20229523d074c63, slot#1)
2025-10-12 23:55:26 (19324): Removing network bandwidth throttle group from VM.
2025-10-12 23:55:26 (19324): Removing VM from VirtualBox.
2025-10-12 23:55:31 (19324): called boinc_finish(0)

</stderr_txt>
]]>

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