Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:25:33 (3626271): wrapper (7.7.26015): starting
16:25:33 (3626271): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 16:25:33] Arguments: --nthreads 12
[2025-10-10 16:25:33] Threads: 12
[2025-10-10 16:25:33] Checking for CVMFS
[2025-10-10 16:25:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 16:25:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 16:25:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 16:25:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 16:25:35] 2.11.5.0 2733 29272 204396 151565 1 237 45390300 45568000 20537 130560 0 290008556 99.862 129331654 23074 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 16:25:35] CVMFS is ok
[2025-10-10 16:25:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 16:25:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 16:25:35] Further information can be found at the LHC@home message board.
[2025-10-10 16:25:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 16:25:35] Checking for apptainer binary...
[2025-10-10 16:25:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 16:25:35] Running /usr/bin/apptainer --version
[2025-10-10 16:25:35] apptainer version 1.4.1-1.el9
[2025-10-10 16:25:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 16:25:36] wns0033.triumf.lcg
[2025-10-10 16:25:36] apptainer works
[2025-10-10 16:25:36] Set ATHENA_PROC_NUMBER=12
[2025-10-10 16:25:36] Set ATHENA_CORE_NUMBER=12
[2025-10-10 16:25:36] Starting ATLAS job with PandaID=6837785107
[2025-10-10 16:25:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 16:31:16]  *** The last 200 lines of the pilot log: ***
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | WARNING  | wrong length of table data, x=[1760138852.0], y=[2018.0] (must be same and length>=4)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | could have reported an average CPU frequency of 2628 MHz (4 samples)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | ..............................
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . Timing measurements:
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . get job = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . initial setup = 4 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . payload setup = 20 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . stage-in = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . payload execution = 48 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . stage-out = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . log creation = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | ..............................
[2025-10-10 16:31:16] 2025-10-10 23:30:17,344 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 16:31:16] 2025-10-10 23:30:17,344 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837785107/pilotlog.txt
[2025-10-10 16:31:16] 2025-10-10 23:30:17,443 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 16:31:16] - Log from pilotlog.txt -
[2025-10-10 16:31:16] 2025-10-10 23:30:17,332 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837785107/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,332 | INFO     | extracted standard info from prmon json
[2025-10-10 16:31:16] 2025-10-10 23:30:17,333 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 16:31:16] 2025-10-10 23:30:17,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 16:31:16] 2025-10-10 23:30:17,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 16:31:16] 2025-10-10 23:30:17,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | WARNING  | wrong length of table data, x=[1760138852.0], y=[2018.0] (must be same and length>=4)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | could have reported an average CPU frequency of 2628 MHz (4 samples)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | ..............................
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . Timing measurements:
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . get job = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . initial setup = 4 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . payload setup = 20 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . stage-in = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . payload execution = 48 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . stage-out = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . log creation = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | ..............................
[2025-10-10 16:31:16] 2025-10-10 23:30:17,344 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 16:31:16] 2025-10-10 23:30:17,344 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837785107/pilotlog.txt
[2025-10-10 16:31:16] 2025-10-10 23:30:17,443 | WARNING  | 
[2025-10-10 16:31:16] [begin log extracts]
[2025-10-10 16:31:16] - Log from pilotlog.txt -
[2025-10-10 16:31:16] 2025-10-10 23:30:17,332 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837785107/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,332 | INFO     | extracted standard info from prmon json
[2025-10-10 16:31:16] 2025-10-10 23:30:17,333 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 16:31:16] 2025-10-10 23:30:17,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 16:31:16] 2025-10-10 23:30:17,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 16:31:16] 2025-10-10 23:30:17,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | WARNING  | wrong length of table data, x=[1760138852.0], y=[2018.0] (must be same and length>=4)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | could have reported an average CPU frequency of 2628 MHz (4 samples)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | ..............................
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . Timing measurements:
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . get job = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . initial setup = 4 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . payload setup = 20 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . stage-in = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . payload execution = 48 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . stage-out = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | . log creation = 0 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,343 | INFO     | ..............................
[2025-10-10 16:31:16] 2025-10-10 23:30:17,344 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 16:31:16] 2025-10-10 23:30:17,344 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837785107/pilotlog.txt
[2025-10-10 16:31:16] [end log extracts]
[2025-10-10 16:31:16] 2025-10-10 23:30:17,444 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,444 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 16:31:16] 2025-10-10 23:30:17,783 | INFO     | 
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | job summary report
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | --------------------------------------------------
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | PanDA job id: 6837785107
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | task id: 46676269
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 16:27:52,854 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | pilot state: failed 
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | transexitcode: 65
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | exeerrorcode: 65
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | exitcode: 65
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | cpuconsumptiontime: 18 s
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | nevents: 0
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | neventsw: 0
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | pid: 3636800
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | pgrp: 3636800
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | corecount: 12
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | event service: False
[2025-10-10 16:31:16] 2025-10-10 23:30:17,784 | INFO     | sizes: {0: 2348580, 1: 2348779, 2: 2348779, 13: 2348807, 20: 2349125, 24: 2349153, 72: 2372458, 73: 2376750, 76: 2376778, 208: 2376972}
[2025-10-10 16:31:16] 2025-10-10 23:30:17,785 | INFO     | --------------------------------------------------
[2025-10-10 16:31:16] 2025-10-10 23:30:17,785 | INFO     | 
[2025-10-10 16:31:16] 2025-10-10 23:30:17,785 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 16:31:16] 2025-10-10 23:30:17,812 | INFO     | time since job start (247s) is within the limit (172800.0s)
[2025-10-10 16:31:16] 2025-10-10 23:30:17,812 | INFO     | 252s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 16:31:16] 2025-10-10 23:30:18,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 16:31:16] 2025-10-10 23:30:18,150 | INFO     | job 6837785107 has completed (purged errors)
[2025-10-10 16:31:16] 2025-10-10 23:30:18,150 | INFO     | overall cleanup function is called
[2025-10-10 16:31:16] 2025-10-10 23:30:19,162 | INFO     | --- collectZombieJob: --- 10, [3636800]
[2025-10-10 16:31:16] 2025-10-10 23:30:19,162 | INFO     | zombie collector waiting for pid 3636800
[2025-10-10 16:31:16] 2025-10-10 23:30:19,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 16:31:16] 2025-10-10 23:30:19,162 | INFO     | collected zombie processes
[2025-10-10 16:31:16] 2025-10-10 23:30:19,162 | INFO     | will attempt to kill all subprocesses of pid=3636800
[2025-10-10 16:31:16] 2025-10-10 23:30:19,389 | INFO     | PID=3630044 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 16:31:16] 2025-10-10 23:30:19,389 | INFO     | .. there are 35 such processes running
[2025-10-10 16:31:16] 2025-10-10 23:30:19,663 | INFO     | process IDs to be killed: [3636800] (in reverse order)
[2025-10-10 16:31:16] 2025-10-10 23:30:19,763 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 16:31:16] 2025-10-10 23:30:19,763 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 16:31:16] 2025-10-10 23:30:19,773 | INFO     | did not find any defunct processes belonging to 3636800
[2025-10-10 16:31:16] 2025-10-10 23:30:19,783 | INFO     | did not find any defunct processes belonging to 3636800
[2025-10-10 16:31:16] 2025-10-10 23:30:19,783 | INFO     | ready for new job
[2025-10-10 16:31:16] 2025-10-10 23:30:19,783 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 16:31:16] 2025-10-10 23:30:19,784 | INFO     | ***************************************
[2025-10-10 16:31:16] 2025-10-10 23:30:19,784 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 16:31:16] 2025-10-10 23:30:19,785 | INFO     | ***************************************
[2025-10-10 16:31:16] 2025-10-10 23:30:19,785 | INFO     | 
[2025-10-10 16:31:16] 2025-10-10 23:30:19,786 | INFO     | architecture information:
[2025-10-10 16:31:16] 2025-10-10 23:30:19,787 | INFO     | executing command: cat /etc/os-release
[2025-10-10 16:31:16] 2025-10-10 23:30:19,798 | INFO     | cat /etc/os-release:
[2025-10-10 16:31:16] NAME="CentOS Linux"
[2025-10-10 16:31:16] VERSION="7 (Core)"
[2025-10-10 16:31:16] ID="centos"
[2025-10-10 16:31:16] ID_LIKE="rhel fedora"
[2025-10-10 16:31:16] VERSION_ID="7"
[2025-10-10 16:31:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 16:31:16] ANSI_COLOR="0;31"
[2025-10-10 16:31:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 16:31:16] HOME_URL="https://www.centos.org/"
[2025-10-10 16:31:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 16:31:16] 
[2025-10-10 16:31:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 16:31:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 16:31:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 16:31:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 16:31:16] 
[2025-10-10 16:31:16] 2025-10-10 23:30:19,799 | INFO     | ***************************************
[2025-10-10 16:31:16] 2025-10-10 23:30:20,302 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 16:31:16] 2025-10-10 23:30:20,334 | INFO     | sufficient remaining disk space (1786803912704 B)
[2025-10-10 16:31:16] 2025-10-10 23:30:20,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 16:31:16] 2025-10-10 23:30:20,334 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 16:31:16] 2025-10-10 23:30:20,335 | INFO     | update_server=False
[2025-10-10 16:31:16] 2025-10-10 23:30:20,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 16:31:16] 2025-10-10 23:30:20,335 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-10 16:31:16] 2025-10-10 23:30:20,335 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 16:31:16] 2025-10-10 23:30:20,335 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 16:31:16] 2025-10-10 23:30:20,335 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 16:31:16] 2025-10-10 23:30:20,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 16:31:16] 2025-10-10 23:30:20,335 | INFO     | aborting loop
[2025-10-10 16:31:16] 2025-10-10 23:30:20,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 16:31:16] 2025-10-10 23:30:20,717 | INFO     | all data control threads have been joined
[2025-10-10 16:31:16] 2025-10-10 23:30:21,340 | INFO     | [job] job monitor thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:21,341 | INFO     | [job] retrieve thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:21,343 | INFO     | all payload control threads have been joined
[2025-10-10 16:31:16] 2025-10-10 23:30:21,548 | INFO     | [payload] validate_post thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:21,676 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:21,705 | INFO     | [job] validate thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:21,725 | INFO     | [data] control thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:21,830 | INFO     | all job control threads have been joined
[2025-10-10 16:31:16] 2025-10-10 23:30:21,912 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:21,916 | INFO     | [data] copytool_in thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:22,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 16:31:16] 2025-10-10 23:30:22,114 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:22,287 | INFO     | [payload] failed_post thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:22,349 | INFO     | [payload] control thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:22,350 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:22,531 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 16:31:16] 2025-10-10 23:30:22,563 | INFO     | [data] copytool_out thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:22,835 | INFO     | [job] control thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:23,540 | INFO     | [job] queue monitor thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:30:26,063 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 16:31:16] 2025-10-10 23:31:09,963 | INFO     | [monitor] cgroup control has ended
[2025-10-10 16:31:16] 2025-10-10 23:31:10,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447508592448)>', '<ExcThread(monitor, started 140446839863040)>']
[2025-10-10 16:31:16] 2025-10-10 23:31:10,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 16:31:16] 2025-10-10 23:31:10,657 | INFO     | [monitor] control thread has ended
[2025-10-10 16:31:16] 2025-10-10 23:31:15,277 | INFO     | all workflow threads have been joined
[2025-10-10 16:31:16] 2025-10-10 23:31:15,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 16:31:16] 2025-10-10 23:31:15,295 | INFO     | traces error code: 0
[2025-10-10 16:31:16] 2025-10-10 23:31:15,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 16:31:16] 2025-10-10 23:31:15,448 [wrapper] ==== pilot stdout END ====
[2025-10-10 16:31:16] 2025-10-10 23:31:15,464 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 16:31:16] 2025-10-10 23:31:15,473 [wrapper] pilotpid: 3630044
[2025-10-10 16:31:16] 2025-10-10 23:31:15,476 [wrapper] Pilot exit status: 0
[2025-10-10 16:31:16] 2025-10-10 23:31:15,506 [wrapper] pandaids: 6837785107
[2025-10-10 16:31:16] 2025-10-10 23:31:15,648 [wrapper] cleanup supervisor_pilot 3630051 3630045
[2025-10-10 16:31:16] 2025-10-10 23:31:15,661 [wrapper] Test setup, not cleaning
[2025-10-10 16:31:16] 2025-10-10 23:31:15,675 [wrapper] apfmon messages muted
[2025-10-10 16:31:16] 2025-10-10 23:31:15,712 [wrapper] ==== wrapper stdout END ====
[2025-10-10 16:31:16] 2025-10-10 23:31:15,728 [wrapper] ==== wrapper stderr END ====
[2025-10-10 16:31:16]  *** Error codes and diagnostics ***
[2025-10-10 16:31:16]     "exeErrorCode": 65,
[2025-10-10 16:31:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 16:31:16]     "pilotErrorCode": 1305,
[2025-10-10 16:31:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 16:31:16]  *** Listing of results directory ***
[2025-10-10 16:31:16] total 219204
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc    557409 Oct 10 13:32 pilot3.tar.gz
[2025-10-10 16:31:16] -rwx------. 1 boinc boinc     36292 Oct 10 13:42 runpilot2-wrapper.sh
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc      5112 Oct 10 13:42 queuedata.json
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc       100 Oct 10 16:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 16:31:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 16:25 run_atlas
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc       105 Oct 10 16:25 job.xml
[2025-10-10 16:31:16] -rw-r--r--. 2 boinc boinc 220329563 Oct 10 16:25 EVNT.46676267._000570.pool.root.1
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc      6593 Oct 10 16:25 init_data.xml
[2025-10-10 16:31:16] -rw-r--r--. 2 boinc boinc     15120 Oct 10 16:25 start_atlas.sh
[2025-10-10 16:31:16] drwxrwx--x. 2 boinc boinc      4096 Oct 10 16:25 shared
[2025-10-10 16:31:16] -rw-r--r--. 2 boinc boinc    569679 Oct 10 16:25 input.tar.gz
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc         0 Oct 10 16:25 boinc_lockfile
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc      2548 Oct 10 16:25 pandaJob.out
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc    975525 Oct 10 16:26 agis_schedconf.cvmfs.json
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc   1560580 Oct 10 16:26 agis_ddmendpoints.agis.ALL.json
[2025-10-10 16:31:16] drwx------. 5 boinc boinc      4096 Oct 10 16:26 pilot3
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc       524 Oct 10 16:27 boinc_task_state.xml
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc       945 Oct 10 16:27 memory_monitor_summary.json
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc     22264 Oct 10 16:28 log.46676269._044938.job.log.tgz.1
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc        95 Oct 10 16:30 pilot_heartbeat.json
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc      8377 Oct 10 16:30 heartbeat.json
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc      8192 Oct 10 16:31 boinc_mmap_file
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc        22 Oct 10 16:31 wrapper_checkpoint.txt
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc      4551 Oct 10 16:31 pilotlog.txt
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc     92311 Oct 10 16:31 log.46676269._044938.job.log.1
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc       188 Oct 10 16:31 output.list
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc       620 Oct 10 16:31 runtime_log
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc    133120 Oct 10 16:31 result.tar.gz
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc      8528 Oct 10 16:31 runtime_log.err
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc       644 Oct 10 16:31 MXmKDmR7YR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmOeNDmRYQo5n.diag
[2025-10-10 16:31:16] -rw-r--r--. 1 boinc boinc     21914 Oct 10 16:31 stderr.txt
[2025-10-10 16:31:16] No HITS result produced
[2025-10-10 16:31:16]  *** Contents of shared directory: ***
[2025-10-10 16:31:16] total 215880
[2025-10-10 16:31:16] -rw-r--r--. 2 boinc boinc 220329563 Oct 10 16:25 ATLAS.root_0
[2025-10-10 16:31:16] -rw-r--r--. 2 boinc boinc     15120 Oct 10 16:25 start_atlas.sh
[2025-10-10 16:31:16] -rw-r--r--. 2 boinc boinc    569679 Oct 10 16:25 input.tar.gz
[2025-10-10 16:31:16] -rw-------. 1 boinc boinc    133120 Oct 10 16:31 result.tar.gz
16:31:18 (3626271): run_atlas exited; CPU time 27.321413
16:31:18 (3626271): called boinc_finish(0)

</stderr_txt>
]]>

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