Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:38:29 (1996485): wrapper (7.7.26015): starting
20:38:29 (1996485): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 20:38:29] Arguments: --nthreads 4
[2025-10-11 20:38:29] Threads: 4
[2025-10-11 20:38:29] Checking for CVMFS
[2025-10-11 20:38:29] No cvmfs_config command found, will try listing directly
[2025-10-11 20:38:29] CVMFS is ok
[2025-10-11 20:38:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:38:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:38:29] Further information can be found at the LHC@home message board.
[2025-10-11 20:38:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:38:29] Checking for apptainer binary...
[2025-10-11 20:38:29] which: no apptainer in ((null))
[2025-10-11 20:38:29] apptainer is not installed, using version from CVMFS
[2025-10-11 20:38:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:38:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-11 20:38:29] apptainer works
[2025-10-11 20:38:29] Set ATHENA_PROC_NUMBER=4
[2025-10-11 20:38:29] Set ATHENA_CORE_NUMBER=4
[2025-10-11 20:38:29] Starting ATLAS job with PandaID=6837705758
[2025-10-11 20:38:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:30:16 (2279831): wrapper (7.7.26015): starting
23:30:16 (2279831): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 23:30:16] Arguments: --nthreads 4
[2025-10-11 23:30:16] Threads: 4
[2025-10-11 23:30:16] This job has been restarted, cleaning up previous attempt
[2025-10-11 23:30:16] Checking for CVMFS
[2025-10-11 23:30:16] No cvmfs_config command found, will try listing directly
[2025-10-11 23:30:16] CVMFS is ok
[2025-10-11 23:30:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:30:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:30:16] Further information can be found at the LHC@home message board.
[2025-10-11 23:30:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:30:16] Checking for apptainer binary...
[2025-10-11 23:30:16] which: no apptainer in ((null))
[2025-10-11 23:30:16] apptainer is not installed, using version from CVMFS
[2025-10-11 23:30:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:30:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-11 23:30:16] apptainer works
[2025-10-11 23:30:16] Set ATHENA_PROC_NUMBER=4
[2025-10-11 23:30:16] Set ATHENA_CORE_NUMBER=4
[2025-10-11 23:30:16] Starting ATLAS job with PandaID=6837705758
[2025-10-11 23:30:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:54:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:54:51] 2025-10-12 00:32:29,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 02:54:51] 2025-10-12 00:32:29,105 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:54:51] 2025-10-12 00:32:29,106 | INFO     | sum of square deviations: 1778377530.0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,107 | INFO     | sum of deviations: -12993046908.999994
[2025-10-12 02:54:51] 2025-10-12 00:32:29,107 | INFO     | mean x: 1760223683.0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,107 | INFO     | mean y: 2341938.4860335197
[2025-10-12 02:54:51] 2025-10-12 00:32:29,107 | INFO     | -- intersect: 12862754588.634474
[2025-10-12 02:54:51] 2025-10-12 00:32:29,107 | INFO     | intersect: 12862754588.634474
[2025-10-12 02:54:51] 2025-10-12 00:32:29,108 | INFO     | chi2: 1.9940254430691229
[2025-10-12 02:54:51] 2025-10-12 00:32:29,108 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 02:54:51] 2025-10-12 00:32:29,109 | INFO     | sum of deviations: -2326709549.500002
[2025-10-12 02:54:51] 2025-10-12 00:32:29,109 | INFO     | mean x: 1760223530.5
[2025-10-12 02:54:51] 2025-10-12 00:32:29,109 | INFO     | mean y: 2352918.672413793
[2025-10-12 02:54:51] 2025-10-12 00:32:29,109 | INFO     | -- intersect: 2509605981.7081375
[2025-10-12 02:54:51] 2025-10-12 00:32:29,109 | INFO     | intersect: 2509605981.7081375
[2025-10-12 02:54:51] 2025-10-12 00:32:29,110 | INFO     | chi2: 1.3295298483736868
[2025-10-12 02:54:51] 2025-10-12 00:32:29,110 | INFO     | current chi2=1.3295298483736868 (change=33.32432878452501 %)
[2025-10-12 02:54:51] 2025-10-12 00:32:29,110 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,111 | INFO     | sum of deviations: -2145995616.0000045
[2025-10-12 02:54:51] 2025-10-12 00:32:29,111 | INFO     | time since job start (10922s) is within the limit (172800.0s)
[2025-10-12 02:54:51] 2025-10-12 00:32:29,111 | INFO     | mean x: 1760223378.0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,112 | INFO     | mean y: 2353120.1893491126
[2025-10-12 02:54:51] 2025-10-12 00:32:29,112 | INFO     | -- intersect: 2526259743.969374
[2025-10-12 02:54:51] 2025-10-12 00:32:29,112 | INFO     | intersect: 2526259743.969374
[2025-10-12 02:54:51] 2025-10-12 00:32:29,112 | INFO     | chi2: 1.3294941391936117
[2025-10-12 02:54:51] 2025-10-12 00:32:29,112 | INFO     | current chi2=1.3294941391936117 (change=0.0026858501987598623 %)
[2025-10-12 02:54:51] 2025-10-12 00:32:29,113 | INFO     | right removable region: 168
[2025-10-12 02:54:51] 2025-10-12 00:32:29,113 | INFO     | sum of square deviations: 1633472487.5
[2025-10-12 02:54:51] 2025-10-12 00:32:29,114 | INFO     | sum of deviations: -32069636689.0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,114 | INFO     | mean x: 1760223835.5
[2025-10-12 02:54:51] 2025-10-12 00:32:29,114 | INFO     | mean y: 2361635.436781609
[2025-10-12 02:54:51] 2025-10-12 00:32:29,114 | INFO     | -- intersect: 34560482037.083954
[2025-10-12 02:54:51] 2025-10-12 00:32:29,114 | INFO     | intersect: 34560482037.083954
[2025-10-12 02:54:51] 2025-10-12 00:32:29,114 | INFO     | chi2: 0.7577498850752548
[2025-10-12 02:54:51] 2025-10-12 00:32:29,114 | INFO     | current chi2=0.7577498850752548 (change=61.99898613585607 %)
[2025-10-12 02:54:51] 2025-10-12 00:32:29,115 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,116 | INFO     | sum of deviations: -28831561184.0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,116 | INFO     | mean x: 1760223988.0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,116 | INFO     | mean y: 2358027.4437869824
[2025-10-12 02:54:51] 2025-10-12 00:32:29,116 | INFO     | -- intersect: 33911184737.64779
[2025-10-12 02:54:51] 2025-10-12 00:32:29,116 | INFO     | intersect: 33911184737.64779
[2025-10-12 02:54:51] 2025-10-12 00:32:29,116 | INFO     | chi2: 0.7562557147930571
[2025-10-12 02:54:51] 2025-10-12 00:32:29,116 | INFO     | current chi2=0.7562557147930571 (change=0.19718515457765856 %)
[2025-10-12 02:54:51] 2025-10-12 00:32:29,117 | INFO     | left removable region: 20
[2025-10-12 02:54:51] 2025-10-12 00:32:29,117 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,118 | INFO     | sum of deviations: -11451250162.5
[2025-10-12 02:54:51] 2025-10-12 00:32:29,118 | INFO     | mean x: 1760223957.5
[2025-10-12 02:54:51] 2025-10-12 00:32:29,118 | INFO     | mean y: 2362424.358108108
[2025-10-12 02:54:51] 2025-10-12 00:32:29,118 | INFO     | -- intersect: 20055257777.582336
[2025-10-12 02:54:51] 2025-10-12 00:32:29,118 | INFO     | intersect: 20055257777.582336
[2025-10-12 02:54:51] 2025-10-12 00:32:29,118 | INFO     | chi2: 0.06072911542244842
[2025-10-12 02:54:51] 2025-10-12 00:32:29,118 | INFO     | -- intersect: 20055257777.582336
[2025-10-12 02:54:51] 2025-10-12 00:32:29,118 | INFO     | current memory leak: -11.39 B/s (using 148 data points, chi2=0.06)
[2025-10-12 02:54:51] 2025-10-12 00:32:29,119 | INFO     | could have reported an average CPU frequency of 2606 MHz (10 samples)
[2025-10-12 02:54:51] 2025-10-12 00:32:29,119 | INFO     | ..............................
[2025-10-12 02:54:51] 2025-10-12 00:32:29,119 | INFO     | . Timing measurements:
[2025-10-12 02:54:51] 2025-10-12 00:32:29,119 | INFO     | . get job = 0 s
[2025-10-12 02:54:51] 2025-10-12 00:32:29,119 | INFO     | . initial setup = 1 s
[2025-10-12 02:54:51] 2025-10-12 00:32:29,119 | INFO     | . payload setup = 6 s
[2025-10-12 02:54:51] 2025-10-12 00:32:29,119 | INFO     | . stage-in = 0 s
[2025-10-12 02:54:51] 2025-10-12 00:32:29,120 | INFO     | . payload execution = 10888 s
[2025-10-12 02:54:51] 2025-10-12 00:32:29,120 | INFO     | . stage-out = 1 s
[2025-10-12 02:54:51] 2025-10-12 00:32:29,120 | INFO     | . log creation = 0 s
[2025-10-12 02:54:51] 2025-10-12 00:32:29,120 | INFO     | ..............................
[2025-10-12 02:54:51] 2025-10-12 00:32:29,216 | INFO     | 
[2025-10-12 02:54:51] 2025-10-12 00:32:29,216 | INFO     | job summary report
[2025-10-12 02:54:51] 2025-10-12 00:32:29,216 | INFO     | --------------------------------------------------
[2025-10-12 02:54:51] 2025-10-12 00:32:29,216 | INFO     | PanDA job id: 6837705758
[2025-10-12 02:54:51] 2025-10-12 00:32:29,216 | INFO     | task id: 46676269
[2025-10-12 02:54:51] 2025-10-12 00:32:29,216 | INFO     | errors: (none)
[2025-10-12 02:54:51] 2025-10-12 00:32:29,216 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:54:51] 2025-10-12 00:32:29,216 | INFO     | pilot state: finished 
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | transexitcode: 0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | exeerrorcode: 0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | exeerrordiag: 
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | exitcode: 0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | exitmsg: OK
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | cpuconsumptiontime: 41745 s
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | nevents: 400
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | neventsw: 0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | pid: 2292332
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | pgrp: 2292332
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | corecount: 4
[2025-10-12 02:54:51] 2025-10-12 00:32:29,217 | INFO     | event service: False
[2025-10-12 02:54:51] 2025-10-12 00:32:29,218 | INFO     | sizes: {0: 2348696, 1: 2348895, 5: 2349157, 12: 2349213, 10898: 2378435, 10900: 2387455, 10902: 2387639, 10906: 2387833}
[2025-10-12 02:54:51] 2025-10-12 00:32:29,218 | INFO     | --------------------------------------------------
[2025-10-12 02:54:51] 2025-10-12 00:32:29,218 | INFO     | 
[2025-10-12 02:54:51] 2025-10-12 00:32:29,218 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-10-12 02:54:51] 2025-10-12 00:32:29,241 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,241 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,243 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:54:51] 2025-10-12 00:32:29,243 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,243 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:54:51] 2025-10-12 00:32:29,243 | INFO     | job 6837705758 has completed (purged errors)
[2025-10-12 02:54:51] 2025-10-12 00:32:29,243 | INFO     | overall cleanup function is called
[2025-10-12 02:54:51] 2025-10-12 00:32:30,251 | INFO     | --- collectZombieJob: --- 10, [2292332]
[2025-10-12 02:54:51] 2025-10-12 00:32:30,251 | INFO     | zombie collector waiting for pid 2292332
[2025-10-12 02:54:51] 2025-10-12 00:32:30,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:54:51] 2025-10-12 00:32:30,251 | INFO     | collected zombie processes
[2025-10-12 02:54:51] 2025-10-12 00:32:30,251 | INFO     | will attempt to kill all subprocesses of pid=2292332
[2025-10-12 02:54:51] 2025-10-12 00:32:30,618 | INFO     | process IDs to be killed: [2292332] (in reverse order)
[2025-10-12 02:54:51] 2025-10-12 00:32:30,734 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:54:51] 2025-10-12 00:32:30,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:54:51] 2025-10-12 00:32:30,750 | INFO     | did not find any defunct processes belonging to 2292332
[2025-10-12 02:54:51] 2025-10-12 00:32:30,765 | INFO     | did not find any defunct processes belonging to 2292332
[2025-10-12 02:54:51] 2025-10-12 00:32:30,765 | INFO     | ready for new job
[2025-10-12 02:54:51] 2025-10-12 00:32:30,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:54:51] 2025-10-12 00:32:30,768 | INFO     | ***************************************
[2025-10-12 02:54:51] 2025-10-12 00:32:30,768 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:54:51] 2025-10-12 00:32:30,768 | INFO     | ***************************************
[2025-10-12 02:54:51] 2025-10-12 00:32:30,768 | INFO     | 
[2025-10-12 02:54:51] 2025-10-12 00:32:30,772 | INFO     | architecture information:
[2025-10-12 02:54:51] 2025-10-12 00:32:30,772 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:54:51] 2025-10-12 00:32:30,789 | INFO     | cat /etc/os-release:
[2025-10-12 02:54:51] NAME="CentOS Linux"
[2025-10-12 02:54:51] VERSION="7 (Core)"
[2025-10-12 02:54:51] ID="centos"
[2025-10-12 02:54:51] ID_LIKE="rhel fedora"
[2025-10-12 02:54:51] VERSION_ID="7"
[2025-10-12 02:54:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:54:51] ANSI_COLOR="0;31"
[2025-10-12 02:54:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:54:51] HOME_URL="https://www.centos.org/"
[2025-10-12 02:54:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:54:51] 
[2025-10-12 02:54:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:54:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:54:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:54:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:54:51] 
[2025-10-12 02:54:51] 2025-10-12 00:32:30,789 | INFO     | ***************************************
[2025-10-12 02:54:51] 2025-10-12 00:32:31,292 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-10-12 02:54:51] 2025-10-12 00:32:31,310 | INFO     | sufficient remaining disk space (694946889728 B)
[2025-10-12 02:54:51] 2025-10-12 00:32:31,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:54:51] 2025-10-12 00:32:31,310 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:54:51] 2025-10-12 00:32:31,310 | INFO     | update_server=False
[2025-10-12 02:54:51] 2025-10-12 00:32:31,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:54:51] 2025-10-12 00:32:31,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:54:51] 2025-10-12 00:32:31,311 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:54:51] 2025-10-12 00:32:31,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:54:51] 2025-10-12 00:32:31,312 | INFO     | aborting loop
[2025-10-12 02:54:51] 2025-10-12 00:32:31,453 | INFO     | all data control threads have been joined
[2025-10-12 02:54:51] 2025-10-12 00:32:31,528 | INFO     | all payload control threads have been joined
[2025-10-12 02:54:51] 2025-10-12 00:32:32,316 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:32,317 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:32,458 | INFO     | [data] control thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:32,520 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:32,533 | INFO     | [payload] control thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:32,594 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:32,805 | INFO     | all job control threads have been joined
[2025-10-12 02:54:51] 2025-10-12 00:32:33,099 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:33,317 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:33,494 | INFO     | [job] validate thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:33,495 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:33,629 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:33,716 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:33,811 | INFO     | [job] control thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:34,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:54:51] 2025-10-12 00:32:35,230 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:35,317 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:41,782 | INFO     | job.realtimelogging is not enabled
[2025-10-12 02:54:51] 2025-10-12 00:32:42,785 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:54:51] 2025-10-12 00:32:44,439 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:54:51] 2025-10-12 00:32:45,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22619579000640)>', '<ExcThread(monitor, started 22619340363520)>']
[2025-10-12 02:54:51] 2025-10-12 00:32:50,081 | INFO     | all workflow threads have been joined
[2025-10-12 02:54:51] 2025-10-12 00:32:50,081 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:54:51] 2025-10-12 00:32:50,081 | INFO     | traces error code: 0
[2025-10-12 02:54:51] 2025-10-12 00:32:50,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:54:51] 2025-10-12 00:33:02,657 | INFO     | PID=2285368 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 02:54:51] 2025-10-12 00:33:02,657 | INFO     | .. there are 5 such processes running
[2025-10-12 02:54:51] 2025-10-12 00:33:02,657 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:54:51] 2025-10-12 00:33:02,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:54:51] 2025-10-12 00:33:02,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:54:51] 2025-10-12 00:33:02,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:54:51] 2025-10-12 00:33:02,658 | INFO     | [monitor] control thread has ended
[2025-10-12 02:54:51] 2025-10-12 00:33:02,810 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:54:51] 2025-10-12 00:33:02,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:54:51] 2025-10-12 00:33:02,816 [wrapper] pilotpid: 2285368
[2025-10-12 02:54:51] 2025-10-12 00:33:02,819 [wrapper] Pilot exit status: 0
[2025-10-12 02:54:51] 2025-10-12 00:33:02,828 [wrapper] pandaids: 6837705758 6837705758
[2025-10-12 02:54:51] 2025-10-12 00:33:02,906 [wrapper] cleanup supervisor_pilot 2550155 2285369
[2025-10-12 02:54:51] 2025-10-12 00:33:02,909 [wrapper] Test setup, not cleaning
[2025-10-12 02:54:51] 2025-10-12 00:33:02,912 [wrapper] apfmon messages muted
[2025-10-12 02:54:51] 2025-10-12 00:33:02,915 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:54:51] 2025-10-12 00:33:02,918 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:54:51]  *** Error codes and diagnostics ***
[2025-10-12 02:54:51]     "exeErrorCode": 0,
[2025-10-12 02:54:51]     "exeErrorDiag": "",
[2025-10-12 02:54:51]     "pilotErrorCode": 0,
[2025-10-12 02:54:51]     "pilotErrorDiag": "",
[2025-10-12 02:54:51]  *** Listing of results directory ***
[2025-10-12 02:54:51] total 628608
[2025-10-12 02:54:51] drwx------ 5 boinc boinc      4096 Oct  7 09:00 pilot3
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc      5112 Oct 10 19:46 queuedata.json
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc    557409 Oct 10 19:48 pilot3.tar.gz
[2025-10-12 02:54:51] -rwx------ 1 boinc boinc     36292 Oct 10 19:49 runpilot2-wrapper.sh
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc       100 Oct 11 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:54:51] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 20:38 run_atlas
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc       105 Oct 11 20:38 job.xml
[2025-10-12 02:54:51] -rw-r--r-- 3 boinc boinc 221201213 Oct 11 20:38 EVNT.46676267._001724.pool.root.1
[2025-10-12 02:54:51] -rw-r--r-- 3 boinc boinc 221201213 Oct 11 20:38 ATLAS.root_0
[2025-10-12 02:54:51] drwxrwx--x 2 boinc boinc      4096 Oct 11 20:38 shared
[2025-10-12 02:54:51] -rw-r--r-- 2 boinc boinc    569679 Oct 11 20:38 input.tar.gz
[2025-10-12 02:54:51] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:38 start_atlas.sh
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc         0 Oct 11 20:38 boinc_lockfile
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc      2549 Oct 11 23:30 pandaJob.out
[2025-10-12 02:54:51] -rw------- 1 boinc boinc    975528 Oct 11 23:30 agis_schedconf.cvmfs.json
[2025-10-12 02:54:51] -rw------- 1 boinc boinc 193582446 Oct 12 02:31 HITS.46676269._042564.pool.root.1
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc       528 Oct 12 02:31 boinc_task_state.xml
[2025-10-12 02:54:51] -rw------- 1 boinc boinc        97 Oct 12 02:32 pilot_heartbeat.json
[2025-10-12 02:54:51] -rw------- 1 boinc boinc      1033 Oct 12 02:32 memory_monitor_summary.json
[2025-10-12 02:54:51] -rw------- 1 boinc boinc   1560580 Oct 12 02:32 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:54:51] -rw------- 1 boinc boinc    349640 Oct 12 02:32 log.46676269._042564.job.log.tgz.1
[2025-10-12 02:54:51] -rw------- 1 boinc boinc      7828 Oct 12 02:32 heartbeat.json
[2025-10-12 02:54:51] -rw------- 1 boinc boinc       822 Oct 12 02:33 pilotlog.txt
[2025-10-12 02:54:51] -rw------- 1 boinc boinc   1550495 Oct 12 02:33 log.46676269._042564.job.log.1
[2025-10-12 02:54:51] -rw------- 1 boinc boinc       357 Oct 12 02:33 output.list
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc       620 Oct 12 02:33 runtime_log
[2025-10-12 02:54:51] -rw------- 1 boinc boinc   1914880 Oct 12 02:33 result.tar.gz
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc      9147 Oct 12 02:33 runtime_log.err
[2025-10-12 02:54:51] -rw------- 1 boinc boinc       790 Oct 12 02:33 MWyLDmrPWR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR1dNDmx9OUbn.diag
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc      6640 Oct 12 02:39 init_data.xml
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc        26 Oct 12 02:54 wrapper_checkpoint.txt
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc      8192 Oct 12 02:54 boinc_mmap_file
[2025-10-12 02:54:51] -rw-r--r-- 1 boinc boinc     22614 Oct 12 02:54 stderr.txt
[2025-10-12 02:54:51] HITS file was successfully produced:
[2025-10-12 02:54:51] -rw------- 1 boinc boinc 193582446 Oct 12 02:31 shared/HITS.pool.root.1
[2025-10-12 02:54:51]  *** Contents of shared directory: ***
[2025-10-12 02:54:51] total 407524
[2025-10-12 02:54:51] -rw-r--r-- 3 boinc boinc 221201213 Oct 11 20:38 ATLAS.root_0
[2025-10-12 02:54:51] -rw-r--r-- 2 boinc boinc    569679 Oct 11 20:38 input.tar.gz
[2025-10-12 02:54:51] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:38 start_atlas.sh
[2025-10-12 02:54:51] -rw------- 1 boinc boinc 193582446 Oct 12 02:31 HITS.pool.root.1
[2025-10-12 02:54:51] -rw------- 1 boinc boinc   1914880 Oct 12 02:33 result.tar.gz
02:54:53 (2279831): run_atlas exited; CPU time 42205.175809
02:54:53 (2279831): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN