Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:24:10 (234159): wrapper (7.7.26015): starting
19:24:10 (234159): wrapper: running run_atlas (--nthreads 11)
[2025-10-10 19:24:10] Arguments: --nthreads 11
[2025-10-10 19:24:10] Threads: 11
[2025-10-10 19:24:10] Checking for CVMFS
[2025-10-10 19:24:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 19:24:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 19:24:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 19:24:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 19:24:14] 2.13.2.0 148585 115349 210040 151565 0 106 23130473 39288833 7902 16776704 0 58973125 99.728 41733760 35303 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 19:24:14] CVMFS is ok
[2025-10-10 19:24:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 19:24:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 19:24:14] Further information can be found at the LHC@home message board.
[2025-10-10 19:24:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 19:24:14] Checking for apptainer binary...
[2025-10-10 19:24:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 19:24:14] Running /usr/bin/apptainer --version
[2025-10-10 19:24:15] apptainer version 1.4.3-1.el9
[2025-10-10 19:24:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 19:24:16] c-210-12.aglt2.org
[2025-10-10 19:24:16] apptainer works
[2025-10-10 19:24:16] Set ATHENA_PROC_NUMBER=11
[2025-10-10 19:24:16] Set ATHENA_CORE_NUMBER=11
[2025-10-10 19:24:17] Starting ATLAS job with PandaID=6837631289
[2025-10-10 19:24:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 03:51:50]  *** The last 200 lines of the pilot log: ***
[2025-10-11 03:51:50] 2025-10-11 07:51:00,936 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837631289/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 03:51:50] 2025-10-11 07:51:00,937 | INFO     | extracted standard info from prmon json
[2025-10-11 03:51:50] 2025-10-11 07:51:00,937 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 03:51:50] 2025-10-11 07:51:00,938 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 03:51:50] 2025-10-11 07:51:00,938 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 03:51:50] 2025-10-11 07:51:00,938 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 03:51:50] 2025-10-11 07:51:00,960 | INFO     | fitting pss+swap vs Time
[2025-10-11 03:51:50] 2025-10-11 07:51:00,962 | INFO     | sum of square deviations: 37383047177.613464
[2025-10-11 03:51:50] 2025-10-11 07:51:00,976 | INFO     | sum of deviations: -118087706201.26105
[2025-10-11 03:51:50] 2025-10-11 07:51:00,977 | INFO     | mean x: 1760153968.1518219
[2025-10-11 03:51:50] 2025-10-11 07:51:00,977 | INFO     | mean y: 2665324.123481781
[2025-10-11 03:51:50] 2025-10-11 07:51:00,977 | INFO     | -- intersect: 5562740287.316074
[2025-10-11 03:51:50] 2025-10-11 07:51:00,977 | INFO     | intersect: 5562740287.316074
[2025-10-11 03:51:50] 2025-10-11 07:51:00,978 | INFO     | chi2: 3.3292980551311606
[2025-10-11 03:51:50] 2025-10-11 07:51:00,979 | INFO     | sum of square deviations: 36259644966.66657
[2025-10-11 03:51:50] 2025-10-11 07:51:00,994 | INFO     | sum of deviations: -84195850411.66663
[2025-10-11 03:51:50] 2025-10-11 07:51:00,994 | INFO     | mean x: 1760153815.6666667
[2025-10-11 03:51:50] 2025-10-11 07:51:00,994 | INFO     | mean y: 2669887.701431493
[2025-10-11 03:51:50] 2025-10-11 07:51:00,994 | INFO     | -- intersect: 4089793396.5397763
[2025-10-11 03:51:50] 2025-10-11 07:51:00,995 | INFO     | intersect: 4089793396.5397763
[2025-10-11 03:51:50] 2025-10-11 07:51:00,995 | INFO     | chi2: 2.639469524550916
[2025-10-11 03:51:50] 2025-10-11 07:51:01,000 | INFO     | current chi2=2.639469524550916 (change=20.71993913302749 %)
[2025-10-11 03:51:50] 2025-10-11 07:51:01,000 | INFO     | right removable region: 488
[2025-10-11 03:51:50] 2025-10-11 07:51:01,001 | INFO     | sum of square deviations: 36259177216.331276
[2025-10-11 03:51:50] 2025-10-11 07:51:01,011 | INFO     | time since job start (30317s) is within the limit (172800.0s)
[2025-10-11 03:51:50] 2025-10-11 07:51:01,012 | INFO     | sum of deviations: -227763141504.96918
[2025-10-11 03:51:50] 2025-10-11 07:51:01,012 | INFO     | mean x: 1760154120.6687117
[2025-10-11 03:51:50] 2025-10-11 07:51:01,017 | INFO     | mean y: 2680160.3026584866
[2025-10-11 03:51:50] 2025-10-11 07:51:01,017 | INFO     | -- intersect: 11059142629.502214
[2025-10-11 03:51:50] 2025-10-11 07:51:01,017 | INFO     | intersect: 11059142629.502214
[2025-10-11 03:51:50] 2025-10-11 07:51:01,018 | INFO     | chi2: 1.2565866495842717
[2025-10-11 03:51:50] 2025-10-11 07:51:01,018 | INFO     | current chi2=1.2565866495842717 (change=62.25670910876835 %)
[2025-10-11 03:51:50] 2025-10-11 07:51:01,019 | INFO     | sum of square deviations: 35158141239.36152
[2025-10-11 03:51:50] 2025-10-11 07:51:01,034 | INFO     | sum of deviations: -230887959077.2704
[2025-10-11 03:51:50] 2025-10-11 07:51:01,034 | INFO     | mean x: 1760154273.179752
[2025-10-11 03:51:50] 2025-10-11 07:51:01,034 | INFO     | mean y: 2680579.911157025
[2025-10-11 03:51:50] 2025-10-11 07:51:01,034 | INFO     | -- intersect: 11561836253.949558
[2025-10-11 03:51:50] 2025-10-11 07:51:01,035 | INFO     | intersect: 11561836253.949558
[2025-10-11 03:51:50] 2025-10-11 07:51:01,035 | INFO     | chi2: 1.2120203752246088
[2025-10-11 03:51:50] 2025-10-11 07:51:01,036 | INFO     | current chi2=1.2120203752246088 (change=3.5466137074118325 %)
[2025-10-11 03:51:50] 2025-10-11 07:51:01,036 | INFO     | left removable region: 20
[2025-10-11 03:51:50] 2025-10-11 07:51:01,036 | INFO     | sum of square deviations: 31785276501.203
[2025-10-11 03:51:50] 2025-10-11 07:51:01,052 | INFO     | sum of deviations: -148887388044.5
[2025-10-11 03:51:50] 2025-10-11 07:51:01,052 | INFO     | mean x: 1760154395.215812
[2025-10-11 03:51:50] 2025-10-11 07:51:01,052 | INFO     | mean y: 2678508.5
[2025-10-11 03:51:50] 2025-10-11 07:51:01,052 | INFO     | -- intersect: 8247527045.488825
[2025-10-11 03:51:50] 2025-10-11 07:51:01,052 | INFO     | intersect: 8247527045.488825
[2025-10-11 03:51:50] 2025-10-11 07:51:01,053 | INFO     | chi2: 0.4279453663837981
[2025-10-11 03:51:50] 2025-10-11 07:51:01,053 | INFO     | -- intersect: 8247527045.488825
[2025-10-11 03:51:50] 2025-10-11 07:51:01,054 | INFO     | current memory leak: -4.68 B/s (using 468 data points, chi2=0.43)
[2025-10-11 03:51:50] 2025-10-11 07:51:01,055 | INFO     | could have reported an average CPU frequency of 2595 MHz (20 samples)
[2025-10-11 03:51:50] 2025-10-11 07:51:01,056 | INFO     | ..............................
[2025-10-11 03:51:50] 2025-10-11 07:51:01,056 | INFO     | . Timing measurements:
[2025-10-11 03:51:50] 2025-10-11 07:51:01,056 | INFO     | . get job = 0 s
[2025-10-11 03:51:50] 2025-10-11 07:51:01,056 | INFO     | . initial setup = 4 s
[2025-10-11 03:51:50] 2025-10-11 07:51:01,056 | INFO     | . payload setup = 61 s
[2025-10-11 03:51:50] 2025-10-11 07:51:01,057 | INFO     | . stage-in = 0 s
[2025-10-11 03:51:50] 2025-10-11 07:51:01,057 | INFO     | . payload execution = 30131 s
[2025-10-11 03:51:50] 2025-10-11 07:51:01,057 | INFO     | . stage-out = 4 s
[2025-10-11 03:51:50] 2025-10-11 07:51:01,057 | INFO     | . log creation = 0 s
[2025-10-11 03:51:50] 2025-10-11 07:51:01,057 | INFO     | ..............................
[2025-10-11 03:51:50] 2025-10-11 07:51:01,930 | INFO     | 
[2025-10-11 03:51:50] 2025-10-11 07:51:01,930 | INFO     | job summary report
[2025-10-11 03:51:50] 2025-10-11 07:51:01,931 | INFO     | --------------------------------------------------
[2025-10-11 03:51:50] 2025-10-11 07:51:01,931 | INFO     | PanDA job id: 6837631289
[2025-10-11 03:51:50] 2025-10-11 07:51:01,931 | INFO     | task id: 46676269
[2025-10-11 03:51:50] 2025-10-11 07:51:01,931 | INFO     | errors: (none)
[2025-10-11 03:51:50] 2025-10-11 07:51:01,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 03:51:50] 2025-10-11 07:51:01,931 | INFO     | pilot state: finished 
[2025-10-11 03:51:50] 2025-10-11 07:51:01,931 | INFO     | transexitcode: 0
[2025-10-11 03:51:50] 2025-10-11 07:51:01,931 | INFO     | exeerrorcode: 0
[2025-10-11 03:51:50] 2025-10-11 07:51:01,931 | INFO     | exeerrordiag: 
[2025-10-11 03:51:50] 2025-10-11 07:51:01,931 | INFO     | exitcode: 0
[2025-10-11 03:51:50] 2025-10-11 07:51:01,932 | INFO     | exitmsg: OK
[2025-10-11 03:51:50] 2025-10-11 07:51:01,932 | INFO     | cpuconsumptiontime: 54430 s
[2025-10-11 03:51:50] 2025-10-11 07:51:01,932 | INFO     | nevents: 400
[2025-10-11 03:51:50] 2025-10-11 07:51:01,932 | INFO     | neventsw: 0
[2025-10-11 03:51:50] 2025-10-11 07:51:01,932 | INFO     | pid: 247309
[2025-10-11 03:51:50] 2025-10-11 07:51:01,932 | INFO     | pgrp: 247309
[2025-10-11 03:51:50] 2025-10-11 07:51:01,932 | INFO     | corecount: 11
[2025-10-11 03:51:50] 2025-10-11 07:51:01,932 | INFO     | event service: False
[2025-10-11 03:51:50] 2025-10-11 07:51:01,932 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 35: 2348997, 46: 2349153, 54: 2349443, 56: 2349471, 30196: 2387380, 30201: 2396378, 30203: 23
[2025-10-11 03:51:50] 2025-10-11 07:51:01,932 | INFO     | --------------------------------------------------
[2025-10-11 03:51:50] 2025-10-11 07:51:01,933 | INFO     | 
[2025-10-11 03:51:50] 2025-10-11 07:51:01,933 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 03:51:50] 2025-10-11 07:51:02,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,264 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 03:51:50] 2025-10-11 07:51:02,264 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 03:51:50] 2025-10-11 07:51:02,265 | INFO     | job 6837631289 has completed (purged errors)
[2025-10-11 03:51:50] 2025-10-11 07:51:02,265 | INFO     | overall cleanup function is called
[2025-10-11 03:51:50] 2025-10-11 07:51:02,889 | INFO     | PID=238538 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 03:51:50] 2025-10-11 07:51:02,889 | INFO     | .. there are 7 such processes running
[2025-10-11 03:51:50] 2025-10-11 07:51:03,402 | INFO     | --- collectZombieJob: --- 10, [247309]
[2025-10-11 03:51:50] 2025-10-11 07:51:03,402 | INFO     | zombie collector waiting for pid 247309
[2025-10-11 03:51:50] 2025-10-11 07:51:03,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 03:51:50] 2025-10-11 07:51:03,402 | INFO     | collected zombie processes
[2025-10-11 03:51:50] 2025-10-11 07:51:03,402 | INFO     | will attempt to kill all subprocesses of pid=247309
[2025-10-11 03:51:50] 2025-10-11 07:51:04,433 | INFO     | process IDs to be killed: [247309] (in reverse order)
[2025-10-11 03:51:50] 2025-10-11 07:51:04,520 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 03:51:50] 2025-10-11 07:51:04,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 03:51:50] 2025-10-11 07:51:04,576 | INFO     | did not find any defunct processes belonging to 247309
[2025-10-11 03:51:50] 2025-10-11 07:51:04,698 | INFO     | did not find any defunct processes belonging to 247309
[2025-10-11 03:51:50] 2025-10-11 07:51:04,698 | INFO     | ready for new job
[2025-10-11 03:51:50] 2025-10-11 07:51:04,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 03:51:50] 2025-10-11 07:51:04,753 | INFO     | ***************************************
[2025-10-11 03:51:50] 2025-10-11 07:51:04,753 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 03:51:50] 2025-10-11 07:51:04,753 | INFO     | ***************************************
[2025-10-11 03:51:50] 2025-10-11 07:51:04,753 | INFO     | 
[2025-10-11 03:51:50] 2025-10-11 07:51:04,760 | INFO     | architecture information:
[2025-10-11 03:51:50] 2025-10-11 07:51:04,760 | INFO     | executing command: cat /etc/os-release
[2025-10-11 03:51:50] 2025-10-11 07:51:04,820 | INFO     | cat /etc/os-release:
[2025-10-11 03:51:50] NAME="CentOS Linux"
[2025-10-11 03:51:50] VERSION="7 (Core)"
[2025-10-11 03:51:50] ID="centos"
[2025-10-11 03:51:50] ID_LIKE="rhel fedora"
[2025-10-11 03:51:50] VERSION_ID="7"
[2025-10-11 03:51:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 03:51:50] ANSI_COLOR="0;31"
[2025-10-11 03:51:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 03:51:50] HOME_URL="https://www.centos.org/"
[2025-10-11 03:51:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 03:51:50] 
[2025-10-11 03:51:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 03:51:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 03:51:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 03:51:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 03:51:50] 
[2025-10-11 03:51:50] 2025-10-11 07:51:04,821 | INFO     | ***************************************
[2025-10-11 03:51:50] 2025-10-11 07:51:05,325 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 03:51:50] 2025-10-11 07:51:05,410 | INFO     | sufficient remaining disk space (52677312512 B)
[2025-10-11 03:51:50] 2025-10-11 07:51:05,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 03:51:50] 2025-10-11 07:51:05,411 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 03:51:50] 2025-10-11 07:51:05,411 | INFO     | update_server=False
[2025-10-11 03:51:50] 2025-10-11 07:51:05,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 03:51:50] 2025-10-11 07:51:05,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 03:51:50] 2025-10-11 07:51:05,701 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 03:51:50] 2025-10-11 07:51:05,701 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 03:51:50] 2025-10-11 07:51:05,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 03:51:50] 2025-10-11 07:51:05,701 | INFO     | will abort loop
[2025-10-11 03:51:50] 2025-10-11 07:51:06,102 | INFO     | all payload control threads have been joined
[2025-10-11 03:51:50] 2025-10-11 07:51:06,312 | INFO     | all data control threads have been joined
[2025-10-11 03:51:50] 2025-10-11 07:51:06,418 | INFO     | [job] retrieve thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:06,683 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:06,708 | INFO     | [job] job monitor thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:06,784 | INFO     | [payload] failed_post thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:06,873 | INFO     | all job control threads have been joined
[2025-10-11 03:51:50] 2025-10-11 07:51:06,930 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:06,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 03:51:50] 2025-10-11 07:51:07,079 | INFO     | [data] copytool_in thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:07,108 | INFO     | [payload] control thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:07,262 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:07,325 | INFO     | [data] control thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:07,419 | INFO     | [data] copytool_out thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:07,694 | INFO     | [payload] validate_post thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:07,749 | INFO     | [job] validate thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:07,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 03:51:50] 2025-10-11 07:51:07,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:07,879 | INFO     | [job] control thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:07,990 | INFO     | [job] queue monitor thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:11,791 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 03:51:50] 2025-10-11 07:51:35,353 | INFO     | PID=238538 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 03:51:50] 2025-10-11 07:51:35,353 | INFO     | .. there are 7 such processes running
[2025-10-11 03:51:50] 2025-10-11 07:51:35,353 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 03:51:50] 2025-10-11 07:51:35,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 03:51:50] 2025-10-11 07:51:35,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 03:51:50] 2025-10-11 07:51:42,751 | INFO     | [monitor] cgroup control has ended
[2025-10-11 03:51:50] 2025-10-11 07:51:44,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121423095616)>', '<ExcThread(monitor, started 140120908863232)>']
[2025-10-11 03:51:50] 2025-10-11 07:51:45,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 03:51:50] 2025-10-11 07:51:45,428 | INFO     | [monitor] control thread has ended
[2025-10-11 03:51:50] 2025-10-11 07:51:49,653 | INFO     | all workflow threads have been joined
[2025-10-11 03:51:50] 2025-10-11 07:51:49,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 03:51:50] 2025-10-11 07:51:49,671 | INFO     | traces error code: 0
[2025-10-11 03:51:50] 2025-10-11 07:51:49,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 03:51:50] 2025-10-11 07:51:50,149 [wrapper] ==== pilot stdout END ====
[2025-10-11 03:51:50] 2025-10-11 07:51:50,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 03:51:50] 2025-10-11 07:51:50,156 [wrapper] pilotpid: 238538
[2025-10-11 03:51:50] 2025-10-11 07:51:50,160 [wrapper] Pilot exit status: 0
[2025-10-11 03:51:50] 2025-10-11 07:51:50,267 [wrapper] pandaids: 6837631289
[2025-10-11 03:51:50] 2025-10-11 07:51:50,394 [wrapper] cleanup supervisor_pilot  941593 238539
[2025-10-11 03:51:50] 2025-10-11 07:51:50,397 [wrapper] Test setup, not cleaning
[2025-10-11 03:51:50] 2025-10-11 07:51:50,402 [wrapper] apfmon messages muted
[2025-10-11 03:51:50] 2025-10-11 07:51:50,405 [wrapper] ==== wrapper stdout END ====
[2025-10-11 03:51:50] 2025-10-11 07:51:50,409 [wrapper] ==== wrapper stderr END ====
[2025-10-11 03:51:50]  *** Error codes and diagnostics ***
[2025-10-11 03:51:50]     "exeErrorCode": 0,
[2025-10-11 03:51:50]     "exeErrorDiag": "",
[2025-10-11 03:51:50]     "pilotErrorCode": 0,
[2025-10-11 03:51:50]     "pilotErrorDiag": "",
[2025-10-11 03:51:50]  *** Listing of results directory ***
[2025-10-11 03:51:50] total 421096
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 10:05 pilot3.tar.gz
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 10:10 queuedata.json
[2025-10-11 03:51:50] -rwx------. 1 boincer umatlas     36292 Oct 10 10:10 runpilot2-wrapper.sh
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas       100 Oct 10 19:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 03:51:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 19:24 run_atlas
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas       105 Oct 10 19:24 job.xml
[2025-10-11 03:51:50] -rw-r--r--. 2 boincer umatlas 221124280 Oct 10 19:24 EVNT.46676267._001613.pool.root.1
[2025-10-11 03:51:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 19:24 start_atlas.sh
[2025-10-11 03:51:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 19:24 shared
[2025-10-11 03:51:50] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 19:24 input.tar.gz
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas         0 Oct 10 19:24 boinc_lockfile
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 19:24 pandaJob.out
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas    975525 Oct 10 19:25 agis_schedconf.cvmfs.json
[2025-10-11 03:51:50] drwx------. 5 boincer umatlas      4096 Oct 10 19:25 pilot3
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas      6661 Oct 11 03:48 init_data.xml
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas 197585720 Oct 11 03:49 HITS.46676269._039767.pool.root.1
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas       531 Oct 11 03:49 boinc_task_state.xml
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas      1054 Oct 11 03:50 memory_monitor_summary.json
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas   1560580 Oct 11 03:50 agis_ddmendpoints.agis.ALL.json
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas    701314 Oct 11 03:50 log.46676269._039767.job.log.tgz.1
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas        95 Oct 11 03:50 pilot_heartbeat.json
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas      7845 Oct 11 03:51 heartbeat.json
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas        28 Oct 11 03:51 wrapper_checkpoint.txt
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas      5008 Oct 11 03:51 pilotlog.txt
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas   3593654 Oct 11 03:51 log.46676269._039767.job.log.1
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas       357 Oct 11 03:51 output.list
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas       620 Oct 11 03:51 runtime_log
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas   4311040 Oct 11 03:51 result.tar.gz
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas       662 Oct 11 03:51 xReMDmF0SR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzXdNDmCKYQDm.diag
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas      8706 Oct 11 03:51 runtime_log.err
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 03:51 boinc_mmap_file
[2025-10-11 03:51:50] -rw-r--r--. 1 boincer umatlas     21287 Oct 11 03:51 stderr.txt
[2025-10-11 03:51:50] HITS file was successfully produced:
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas 197585720 Oct 11 03:49 shared/HITS.pool.root.1
[2025-10-11 03:51:50]  *** Contents of shared directory: ***
[2025-10-11 03:51:50] total 413692
[2025-10-11 03:51:50] -rw-r--r--. 2 boincer umatlas 221124280 Oct 10 19:24 ATLAS.root_0
[2025-10-11 03:51:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 19:24 start_atlas.sh
[2025-10-11 03:51:50] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 19:24 input.tar.gz
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas 197585720 Oct 11 03:49 HITS.pool.root.1
[2025-10-11 03:51:50] -rw-------. 1 boincer umatlas   4311040 Oct 11 03:51 result.tar.gz
03:52:11 (234159): run_atlas exited; CPU time 55078.462443
03:52:11 (234159): called boinc_finish(0)

</stderr_txt>
]]>

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