Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:25:19 (1777153): wrapper (7.7.26015): starting
09:25:19 (1777153): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 09:25:19] Arguments: --nthreads 12
[2025-10-11 09:25:19] Threads: 12
[2025-10-11 09:25:19] Checking for CVMFS
[2025-10-11 09:25:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:25:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:25:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:25:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:25:21] 2.13.2.0 8216 23152 259720 151576 1 447 35040930 46080001 53150 130560 0 157924835 99.888 46865153 22639 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-11 09:25:21] CVMFS is ok
[2025-10-11 09:25:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:25:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:25:21] Further information can be found at the LHC@home message board.
[2025-10-11 09:25:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:25:21] Checking for apptainer binary...
[2025-10-11 09:25:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 09:25:21] Running /usr/bin/apptainer --version
[2025-10-11 09:25:21] apptainer version 1.4.2-1.el9
[2025-10-11 09:25:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:26:22] mff2103.farm.particle.cz
[2025-10-11 09:26:22] apptainer works
[2025-10-11 09:26:22] Set ATHENA_PROC_NUMBER=12
[2025-10-11 09:26:22] Set ATHENA_CORE_NUMBER=12
[2025-10-11 09:26:22] Starting ATLAS job with PandaID=6837631306
[2025-10-11 09:26:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:40:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:40:07] 2025-10-11 09:28:31,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:40:07] 2025-10-11 09:28:31,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:40:07] 2025-10-11 09:28:31,415 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:40:07] 2025-10-11 09:28:31,416 | INFO     | sum of square deviations: 471562330.0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,416 | INFO     | sum of deviations: 45615020115.0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,425 | INFO     | mean x: 1760171364.0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,425 | INFO     | mean y: 2524342.0782608697
[2025-10-11 11:40:07] 2025-10-11 09:28:31,425 | INFO     | -- intersect: -170261822631.32608
[2025-10-11 11:40:07] 2025-10-11 09:28:31,425 | INFO     | intersect: -170261822631.32608
[2025-10-11 11:40:07] 2025-10-11 09:28:31,425 | INFO     | chi2: 6.619789418690033
[2025-10-11 11:40:07] 2025-10-11 09:28:31,425 | INFO     | sum of square deviations: 412686807.5
[2025-10-11 11:40:07] 2025-10-11 09:28:31,426 | INFO     | sum of deviations: 51556223237.5
[2025-10-11 11:40:07] 2025-10-11 09:28:31,426 | INFO     | mean x: 1760171211.5
[2025-10-11 11:40:07] 2025-10-11 09:28:31,426 | INFO     | mean y: 2538975.918181818
[2025-10-11 11:40:07] 2025-10-11 09:28:31,426 | INFO     | -- intersect: -219892495871.57892
[2025-10-11 11:40:07] 2025-10-11 09:28:31,426 | INFO     | intersect: -219892495871.57892
[2025-10-11 11:40:07] 2025-10-11 09:28:31,426 | INFO     | chi2: 5.907440030354543
[2025-10-11 11:40:07] 2025-10-11 09:28:31,427 | INFO     | current chi2=5.907440030354543 (change=10.760907081489218 %)
[2025-10-11 11:40:07] 2025-10-11 09:28:31,427 | INFO     | right removable region: 109
[2025-10-11 11:40:07] 2025-10-11 09:28:31,427 | INFO     | sum of square deviations: 412686807.5
[2025-10-11 11:40:07] 2025-10-11 09:28:31,427 | INFO     | sum of deviations: 5732245182.499995
[2025-10-11 11:40:07] 2025-10-11 09:28:31,427 | INFO     | mean x: 1760171516.5
[2025-10-11 11:40:07] 2025-10-11 09:28:31,427 | INFO     | mean y: 2627479.518181818
[2025-10-11 11:40:07] 2025-10-11 09:28:31,428 | INFO     | -- intersect: -24446263331.78025
[2025-10-11 11:40:07] 2025-10-11 09:28:31,428 | INFO     | intersect: -24446263331.78025
[2025-10-11 11:40:07] 2025-10-11 09:28:31,428 | INFO     | chi2: 1.8726867066257462
[2025-10-11 11:40:07] 2025-10-11 09:28:31,428 | INFO     | current chi2=1.8726867066257462 (change=71.71078129255166 %)
[2025-10-11 11:40:07] 2025-10-11 09:28:31,428 | INFO     | sum of square deviations: 358927660.0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,429 | INFO     | sum of deviations: -11335860519.000002
[2025-10-11 11:40:07] 2025-10-11 09:28:31,429 | INFO     | mean x: 1760171669.0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,429 | INFO     | mean y: 2675347.419047619
[2025-10-11 11:40:07] 2025-10-11 09:28:31,429 | INFO     | -- intersect: 55593432909.20584
[2025-10-11 11:40:07] 2025-10-11 09:28:31,429 | INFO     | intersect: 55593432909.20584
[2025-10-11 11:40:07] 2025-10-11 09:28:31,429 | INFO     | chi2: 0.9019991591141596
[2025-10-11 11:40:07] 2025-10-11 09:28:31,429 | INFO     | current chi2=0.9019991591141596 (change=51.83395300864797 %)
[2025-10-11 11:40:07] 2025-10-11 09:28:31,429 | INFO     | sum of square deviations: 310052325.0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,430 | INFO     | sum of deviations: -13104946864.5
[2025-10-11 11:40:07] 2025-10-11 09:28:31,430 | INFO     | mean x: 1760171821.5
[2025-10-11 11:40:07] 2025-10-11 09:28:31,430 | INFO     | mean y: 2680602.65
[2025-10-11 11:40:07] 2025-10-11 09:28:31,430 | INFO     | -- intersect: 74399665670.08234
[2025-10-11 11:40:07] 2025-10-11 09:28:31,430 | INFO     | intersect: 74399665670.08234
[2025-10-11 11:40:07] 2025-10-11 09:28:31,430 | INFO     | chi2: 0.8522321736711791
[2025-10-11 11:40:07] 2025-10-11 09:28:31,430 | INFO     | current chi2=0.8522321736711791 (change=5.5174092946889175 %)
[2025-10-11 11:40:07] 2025-10-11 09:28:31,431 | INFO     | left removable region: 30
[2025-10-11 11:40:07] 2025-10-11 09:28:31,431 | INFO     | sum of square deviations: 152858680.0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,431 | INFO     | sum of deviations: -999668304.9999998
[2025-10-11 11:40:07] 2025-10-11 09:28:31,431 | INFO     | mean x: 1760172096.0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,431 | INFO     | mean y: 2686704.1772151897
[2025-10-11 11:40:07] 2025-10-11 09:28:31,431 | INFO     | -- intersect: 11513895983.994474
[2025-10-11 11:40:07] 2025-10-11 09:28:31,431 | INFO     | intersect: 11513895983.994474
[2025-10-11 11:40:07] 2025-10-11 09:28:31,432 | INFO     | chi2: 0.004176197518598803
[2025-10-11 11:40:07] 2025-10-11 09:28:31,432 | INFO     | -- intersect: 11513895983.994474
[2025-10-11 11:40:07] 2025-10-11 09:28:31,432 | INFO     | current memory leak: -6.54 B/s (using 79 data points, chi2=0.00)
[2025-10-11 11:40:07] 2025-10-11 09:28:31,432 | INFO     | could have reported an average CPU frequency of 2834 MHz (7 samples)
[2025-10-11 11:40:07] 2025-10-11 09:28:31,432 | INFO     | ..............................
[2025-10-11 11:40:07] 2025-10-11 09:28:31,432 | INFO     | . Timing measurements:
[2025-10-11 11:40:07] 2025-10-11 09:28:31,433 | INFO     | . get job = 0 s
[2025-10-11 11:40:07] 2025-10-11 09:28:31,433 | INFO     | . initial setup = 5 s
[2025-10-11 11:40:07] 2025-10-11 09:28:31,433 | INFO     | . payload setup = 60 s
[2025-10-11 11:40:07] 2025-10-11 09:28:31,433 | INFO     | . stage-in = 0 s
[2025-10-11 11:40:07] 2025-10-11 09:28:31,433 | INFO     | . payload execution = 7018 s
[2025-10-11 11:40:07] 2025-10-11 09:28:31,433 | INFO     | . stage-out = 2 s
[2025-10-11 11:40:07] 2025-10-11 09:28:31,433 | INFO     | . log creation = 0 s
[2025-10-11 11:40:07] 2025-10-11 09:28:31,433 | INFO     | ..............................
[2025-10-11 11:40:07] 2025-10-11 09:28:31,543 | INFO     | 
[2025-10-11 11:40:07] 2025-10-11 09:28:31,544 | INFO     | job summary report
[2025-10-11 11:40:07] 2025-10-11 09:28:31,544 | INFO     | --------------------------------------------------
[2025-10-11 11:40:07] 2025-10-11 09:28:31,544 | INFO     | PanDA job id: 6837631306
[2025-10-11 11:40:07] 2025-10-11 09:28:31,544 | INFO     | task id: 46676269
[2025-10-11 11:40:07] 2025-10-11 09:28:31,544 | INFO     | errors: (none)
[2025-10-11 11:40:07] 2025-10-11 09:28:31,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:40:07] 2025-10-11 09:28:31,544 | INFO     | pilot state: finished 
[2025-10-11 11:40:07] 2025-10-11 09:28:31,544 | INFO     | transexitcode: 0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,544 | INFO     | exeerrorcode: 0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | exeerrordiag: 
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | exitcode: 0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | exitmsg: OK
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | cpuconsumptiontime: 37678 s
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | nevents: 400
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | neventsw: 0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | pid: 1815064
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | pgrp: 1815064
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | corecount: 12
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | event service: False
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | sizes: {0: 2347978, 1: 2348664, 2: 2348863, 13: 2348863, 23: 2348919, 34: 2348947, 45: 2349103, 46: 2349393, 56: 2349421, 7083: 2376793, 7087: 2386129, 7129: 23862
[2025-10-11 11:40:07] 2025-10-11 09:28:31,545 | INFO     | --------------------------------------------------
[2025-10-11 11:40:07] 2025-10-11 09:28:31,546 | INFO     | 
[2025-10-11 11:40:07] 2025-10-11 09:28:31,546 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-10-11 11:40:07] 2025-10-11 09:28:31,762 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,762 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,762 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,762 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,763 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,763 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,763 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,763 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,763 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,763 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,763 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,763 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,763 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:40:07] 2025-10-11 09:28:31,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:40:07] 2025-10-11 09:28:31,772 | INFO     | job 6837631306 has completed (purged errors)
[2025-10-11 11:40:07] 2025-10-11 09:28:31,773 | INFO     | overall cleanup function is called
[2025-10-11 11:40:07] 2025-10-11 09:28:32,782 | INFO     | --- collectZombieJob: --- 10, [1815064]
[2025-10-11 11:40:07] 2025-10-11 09:28:32,783 | INFO     | zombie collector waiting for pid 1815064
[2025-10-11 11:40:07] 2025-10-11 09:28:32,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:40:07] 2025-10-11 09:28:32,786 | INFO     | collected zombie processes
[2025-10-11 11:40:07] 2025-10-11 09:28:32,786 | INFO     | will attempt to kill all subprocesses of pid=1815064
[2025-10-11 11:40:07] 2025-10-11 09:28:33,704 | INFO     | process IDs to be killed: [1815064] (in reverse order)
[2025-10-11 11:40:07] 2025-10-11 09:28:34,246 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:40:07] 2025-10-11 09:28:34,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:40:07] 2025-10-11 09:28:34,271 | INFO     | did not find any defunct processes belonging to 1815064
[2025-10-11 11:40:07] 2025-10-11 09:28:34,295 | INFO     | did not find any defunct processes belonging to 1815064
[2025-10-11 11:40:07] 2025-10-11 09:28:34,296 | INFO     | ready for new job
[2025-10-11 11:40:07] 2025-10-11 09:28:34,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:40:07] 2025-10-11 09:28:34,298 | INFO     | ***************************************
[2025-10-11 11:40:07] 2025-10-11 09:28:34,298 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:40:07] 2025-10-11 09:28:34,298 | INFO     | ***************************************
[2025-10-11 11:40:07] 2025-10-11 09:28:34,298 | INFO     | 
[2025-10-11 11:40:07] 2025-10-11 09:28:34,303 | INFO     | architecture information:
[2025-10-11 11:40:07] 2025-10-11 09:28:34,303 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:40:07] 2025-10-11 09:28:34,334 | INFO     | cat /etc/os-release:
[2025-10-11 11:40:07] NAME="CentOS Linux"
[2025-10-11 11:40:07] VERSION="7 (Core)"
[2025-10-11 11:40:07] ID="centos"
[2025-10-11 11:40:07] ID_LIKE="rhel fedora"
[2025-10-11 11:40:07] VERSION_ID="7"
[2025-10-11 11:40:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:40:07] ANSI_COLOR="0;31"
[2025-10-11 11:40:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:40:07] HOME_URL="https://www.centos.org/"
[2025-10-11 11:40:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:40:07] 
[2025-10-11 11:40:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:40:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:40:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:40:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:40:07] 
[2025-10-11 11:40:07] 2025-10-11 09:28:34,335 | INFO     | ***************************************
[2025-10-11 11:40:07] 2025-10-11 09:28:34,839 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-10-11 11:40:07] 2025-10-11 09:28:34,956 | INFO     | sufficient remaining disk space (1662717526016 B)
[2025-10-11 11:40:07] 2025-10-11 09:28:34,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:40:07] 2025-10-11 09:28:34,957 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:40:07] 2025-10-11 09:28:34,957 | INFO     | update_server=False
[2025-10-11 11:40:07] 2025-10-11 09:28:34,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:40:07] 2025-10-11 09:28:34,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:40:07] 2025-10-11 09:28:35,308 | INFO     | all data control threads have been joined
[2025-10-11 11:40:07] 2025-10-11 09:28:35,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:40:07] 2025-10-11 09:28:35,323 | INFO     | aborting loop
[2025-10-11 11:40:07] 2025-10-11 09:28:35,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:40:07] 2025-10-11 09:28:35,913 | INFO     | all payload control threads have been joined
[2025-10-11 11:40:07] 2025-10-11 09:28:35,962 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:36,052 | INFO     | [job] validate thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:36,314 | INFO     | [data] control thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:36,329 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:36,332 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:36,547 | INFO     | all job control threads have been joined
[2025-10-11 11:40:07] 2025-10-11 09:28:36,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:40:07] 2025-10-11 09:28:36,919 | INFO     | [payload] control thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:36,964 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:37,002 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:37,039 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:37,068 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:37,189 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:37,374 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:37,554 | INFO     | [job] control thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:37,574 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:39,633 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:28:45,570 | INFO     | job.realtimelogging is not enabled
[2025-10-11 11:40:07] 2025-10-11 09:28:46,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:40:07] 2025-10-11 09:29:04,233 | INFO     | PID=1789333 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 11:40:07] 2025-10-11 09:29:04,234 | INFO     | .. there are 83 such processes running
[2025-10-11 11:40:07] 2025-10-11 09:29:04,234 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:40:07] 2025-10-11 09:29:04,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:40:07] 2025-10-11 09:29:04,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:40:07] 2025-10-11 09:29:15,641 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:40:07] 2025-10-11 09:29:16,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719253272384)>', '<ExcThread(monitor, started 139718759012096)>']
[2025-10-11 11:40:07] 2025-10-11 09:29:17,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:40:07] 2025-10-11 09:29:17,313 | INFO     | [monitor] control thread has ended
[2025-10-11 11:40:07] 2025-10-11 09:29:21,450 | INFO     | all workflow threads have been joined
[2025-10-11 11:40:07] 2025-10-11 09:29:21,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:40:07] 2025-10-11 09:29:21,450 | INFO     | traces error code: 0
[2025-10-11 11:40:07] 2025-10-11 09:29:21,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:40:07] 2025-10-11 09:29:21,718 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:40:07] 2025-10-11 09:29:21,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:40:07] 2025-10-11 09:29:21,806 [wrapper] pilotpid: 1789333
[2025-10-11 11:40:07] 2025-10-11 09:29:21,853 [wrapper] Pilot exit status: 0
[2025-10-11 11:40:07] 2025-10-11 09:29:21,984 [wrapper] pandaids: 6837631306
[2025-10-11 11:40:07] 2025-10-11 09:29:22,353 [wrapper] cleanup supervisor_pilot 2222479 1789334
[2025-10-11 11:40:07] 2025-10-11 09:29:22,404 [wrapper] Test setup, not cleaning
[2025-10-11 11:40:07] 2025-10-11 09:29:22,449 [wrapper] apfmon messages muted
[2025-10-11 11:40:07] 2025-10-11 09:29:22,491 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:40:07] 2025-10-11 09:29:22,516 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:40:07]  *** Error codes and diagnostics ***
[2025-10-11 11:40:07]     "exeErrorCode": 0,
[2025-10-11 11:40:07]     "exeErrorDiag": "",
[2025-10-11 11:40:07]     "pilotErrorCode": 0,
[2025-10-11 11:40:07]     "pilotErrorDiag": "",
[2025-10-11 11:40:07]  *** Listing of results directory ***
[2025-10-11 11:40:07] total 406716
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc    557409 Oct 10 16:05 pilot3.tar.gz
[2025-10-11 11:40:07] -rwx------ 1 boinc boinc     36292 Oct 10 16:13 runpilot2-wrapper.sh
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc      5112 Oct 10 16:13 queuedata.json
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc       100 Oct 11 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:40:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 09:25 run_atlas
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc       105 Oct 11 09:25 job.xml
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc      6665 Oct 11 09:25 init_data.xml
[2025-10-11 11:40:07] -rw-r--r-- 2 boinc boinc 220021144 Oct 11 09:25 EVNT.46676267._001614.pool.root.1
[2025-10-11 11:40:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 09:25 start_atlas.sh
[2025-10-11 11:40:07] drwxrwx--x 2 boinc boinc      4096 Oct 11 09:25 shared
[2025-10-11 11:40:07] -rw-r--r-- 2 boinc boinc    569683 Oct 11 09:25 input.tar.gz
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc         0 Oct 11 09:25 boinc_lockfile
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc      2549 Oct 11 09:26 pandaJob.out
[2025-10-11 11:40:07] -rw------- 1 boinc boinc    975525 Oct 11 09:28 agis_schedconf.cvmfs.json
[2025-10-11 11:40:07] -rw------- 1 boinc boinc   1560580 Oct 11 09:28 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:40:07] drwx------ 5 boinc boinc      4096 Oct 11 09:28 pilot3
[2025-10-11 11:40:07] -rw------- 1 boinc boinc 189755859 Oct 11 11:26 HITS.46676269._039784.pool.root.1
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc       529 Oct 11 11:26 boinc_task_state.xml
[2025-10-11 11:40:07] -rw------- 1 boinc boinc      1023 Oct 11 11:27 memory_monitor_summary.json
[2025-10-11 11:40:07] -rw------- 1 boinc boinc    420560 Oct 11 11:27 log.46676269._039784.job.log.tgz.1
[2025-10-11 11:40:07] -rw------- 1 boinc boinc        95 Oct 11 11:28 pilot_heartbeat.json
[2025-10-11 11:40:07] -rw------- 1 boinc boinc      7780 Oct 11 11:28 heartbeat.json
[2025-10-11 11:40:07] -rw------- 1 boinc boinc      4899 Oct 11 11:29 pilotlog.txt
[2025-10-11 11:40:07] -rw------- 1 boinc boinc    977171 Oct 11 11:29 log.46676269._039784.job.log.1
[2025-10-11 11:40:07] -rw------- 1 boinc boinc       357 Oct 11 11:29 output.list
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc       620 Oct 11 11:29 runtime_log
[2025-10-11 11:40:07] -rw------- 1 boinc boinc   1413120 Oct 11 11:29 result.tar.gz
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc      8764 Oct 11 11:29 runtime_log.err
[2025-10-11 11:40:07] -rw------- 1 boinc boinc       663 Oct 11 11:29 NKzNDm32SR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmU4PMDmax5Xbn.diag
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc        26 Oct 11 11:40 wrapper_checkpoint.txt
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc      8192 Oct 11 11:40 boinc_mmap_file
[2025-10-11 11:40:07] -rw-r--r-- 1 boinc boinc     20948 Oct 11 11:40 stderr.txt
[2025-10-11 11:40:07] HITS file was successfully produced:
[2025-10-11 11:40:07] -rw------- 1 boinc boinc 189755859 Oct 11 11:26 shared/HITS.pool.root.1
[2025-10-11 11:40:07]  *** Contents of shared directory: ***
[2025-10-11 11:40:07] total 402144
[2025-10-11 11:40:07] -rw-r--r-- 2 boinc boinc 220021144 Oct 11 09:25 ATLAS.root_0
[2025-10-11 11:40:07] -rw-r--r-- 2 boinc boinc     15120 Oct 11 09:25 start_atlas.sh
[2025-10-11 11:40:07] -rw-r--r-- 2 boinc boinc    569683 Oct 11 09:25 input.tar.gz
[2025-10-11 11:40:07] -rw------- 1 boinc boinc 189755859 Oct 11 11:26 HITS.pool.root.1
[2025-10-11 11:40:07] -rw------- 1 boinc boinc   1413120 Oct 11 11:29 result.tar.gz
11:40:09 (1777153): run_atlas exited; CPU time 38056.839040
11:40:09 (1777153): called boinc_finish(0)

</stderr_txt>
]]>

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