Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:52:25 (1883591): wrapper (7.7.26015): starting
18:52:25 (1883591): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 18:52:25] Arguments: --nthreads 8
[2025-10-10 18:52:25] Threads: 8
[2025-10-10 18:52:25] Checking for CVMFS
[2025-10-10 18:52:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 18:52:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 18:52:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 18:52:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 18:52:27] 2.13.2.0 3269412 33471 366308 151564 3 588 27681831 40960001 46073 16776704 0 419442736 99.836 179726819 36813 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 18:52:27] CVMFS is ok
[2025-10-10 18:52:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 18:52:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 18:52:27] Further information can be found at the LHC@home message board.
[2025-10-10 18:52:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 18:52:27] Checking for apptainer binary...
[2025-10-10 18:52:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 18:52:27] Running /usr/bin/apptainer --version
[2025-10-10 18:52:27] apptainer version 1.4.3-1.el9
[2025-10-10 18:52:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 18:52:27] c8-16-2.aglt2.org
[2025-10-10 18:52:27] apptainer works
[2025-10-10 18:52:27] Set ATHENA_PROC_NUMBER=8
[2025-10-10 18:52:27] Set ATHENA_CORE_NUMBER=8
[2025-10-10 18:52:28] Starting ATLAS job with PandaID=6837632331
[2025-10-10 18:52:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 19:57:58]  *** The last 200 lines of the pilot log: ***
[2025-10-10 19:57:58] 2025-10-10 23:56:36,819 | INFO     | total number of processed events: 400 (read)
[2025-10-10 19:57:58] 2025-10-10 23:56:36,832 | INFO     | executing command: lscpu
[2025-10-10 19:57:58] 2025-10-10 23:56:36,992 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 19:57:58] 2025-10-10 23:56:37,631 | INFO     | time since job start (3773s) is within the limit (172800.0s)
[2025-10-10 19:57:58] 2025-10-10 23:56:37,902 | WARNING  | process 1914919 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 19:57:58] 2025-10-10 23:56:37,902 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837632331/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 19:57:58] 2025-10-10 23:56:37,907 | INFO     | reaping zombies for max 20 seconds
[2025-10-10 19:57:58] 2025-10-10 23:56:37,942 | INFO     | checking for looping job (in state=finished)
[2025-10-10 19:57:58] 2025-10-10 23:56:37,942 | INFO     | using looping job limit: 7200 s
[2025-10-10 19:57:58] 2025-10-10 23:56:39,409 | INFO     | number of running child processes to parent process 1914919: 1
[2025-10-10 19:57:58] 2025-10-10 23:56:39,409 | INFO     | maximum number of monitored processes: 6
[2025-10-10 19:57:58] 2025-10-10 23:56:40,187 | INFO     | PID=1895617 has CPU usage=17.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-10 19:57:58] 2025-10-10 23:56:40,187 | INFO     | .. there are 71 such processes running
[2025-10-10 19:57:58] 2025-10-10 23:56:41,188 | INFO     | time since job start (3777s) is within the limit (172800.0s)
[2025-10-10 19:57:58] 2025-10-10 23:56:41,915 | INFO     | monitor loop #250: job 0:6837632331 is in state 'finished'
[2025-10-10 19:57:58] 2025-10-10 23:56:41,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:57:58] 2025-10-10 23:56:43,196 | INFO     | time since job start (3779s) is within the limit (172800.0s)
[2025-10-10 19:57:58] 2025-10-10 23:56:44,420 | INFO     | monitor loop #251: job 0:6837632331 is in state 'finished'
[2025-10-10 19:57:58] 2025-10-10 23:56:44,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:57:58] 2025-10-10 23:56:45,202 | INFO     | time since job start (3781s) is within the limit (172800.0s)
[2025-10-10 19:57:58] 2025-10-10 23:56:46,925 | INFO     | monitor loop #252: job 0:6837632331 is in state 'finished'
[2025-10-10 19:57:58] 2025-10-10 23:56:46,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:57:58] 2025-10-10 23:56:47,212 | INFO     | time since job start (3783s) is within the limit (172800.0s)
[2025-10-10 19:57:58] 2025-10-10 23:56:49,219 | INFO     | time since job start (3785s) is within the limit (172800.0s)
[2025-10-10 19:57:58] 2025-10-10 23:56:49,430 | INFO     | monitor loop #253: job 0:6837632331 is in state 'finished'
[2025-10-10 19:57:58] 2025-10-10 23:56:49,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:57:58] 2025-10-10 23:56:51,230 | INFO     | time since job start (3787s) is within the limit (172800.0s)
[2025-10-10 19:57:58] 2025-10-10 23:56:51,936 | INFO     | monitor loop #254: job 0:6837632331 is in state 'finished'
[2025-10-10 19:57:58] 2025-10-10 23:56:51,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:57:58] 2025-10-10 23:56:53,236 | INFO     | time since job start (3789s) is within the limit (172800.0s)
[2025-10-10 19:57:58] 2025-10-10 23:56:54,451 | INFO     | monitor loop #255: job 0:6837632331 is in state 'finished'
[2025-10-10 19:57:58] 2025-10-10 23:56:54,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:57:58] 2025-10-10 23:56:55,265 | INFO     | time since job start (3791s) is within the limit (172800.0s)
[2025-10-10 19:57:58] 2025-10-10 23:56:56,961 | INFO     | monitor loop #256: job 0:6837632331 is in state 'finished'
[2025-10-10 19:57:58] 2025-10-10 23:56:56,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:57:58] 2025-10-10 23:56:57,276 | INFO     | time since job start (3793s) is within the limit (172800.0s)
[2025-10-10 19:57:58] 2025-10-10 23:56:58,996 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 19:57:58] 2025-10-10 23:56:59,006 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9901015624946
[2025-10-10 19:57:58] 2025-10-10 23:56:59,048 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837632331/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 19:57:58] 2025-10-10 23:56:59,049 | INFO     | extracted standard info from prmon json
[2025-10-10 19:57:58] 2025-10-10 23:56:59,049 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 19:57:58] 2025-10-10 23:56:59,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 19:57:58] 2025-10-10 23:56:59,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 19:57:58] 2025-10-10 23:56:59,049 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:57:58] 2025-10-10 23:56:59,050 | INFO     | fitting pss+swap vs Time
[2025-10-10 19:57:58] 2025-10-10 23:56:59,050 | INFO     | sum of square deviations: 46146134.98113208
[2025-10-10 19:57:58] 2025-10-10 23:56:59,050 | INFO     | sum of deviations: -557282307.962264
[2025-10-10 19:57:58] 2025-10-10 23:56:59,050 | INFO     | mean x: 1760138834.018868
[2025-10-10 19:57:58] 2025-10-10 23:56:59,050 | INFO     | mean y: 2170770.962264151
[2025-10-10 19:57:58] 2025-10-10 23:56:59,050 | INFO     | -- intersect: 21258430523.964424
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | intersect: 21258430523.964424
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | chi2: 0.017661993179419844
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | -- intersect: 21258430523.964424
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | current memory leak: -12.08 B/s (using 53 data points, chi2=0.02)
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | ..............................
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | . Timing measurements:
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | . get job = 0 s
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | . initial setup = 8 s
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | . payload setup = 38 s
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | . stage-in = 0 s
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | . payload execution = 3664 s
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | . stage-out = 1 s
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | . log creation = 0 s
[2025-10-10 19:57:58] 2025-10-10 23:56:59,051 | INFO     | ..............................
[2025-10-10 19:57:58] 2025-10-10 23:56:59,188 | INFO     | 
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | job summary report
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | --------------------------------------------------
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | PanDA job id: 6837632331
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | task id: 46676269
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | errors: (none)
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | pilot state: finished 
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | transexitcode: 0
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | exeerrorcode: 0
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | exeerrordiag: 
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | exitcode: 0
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | exitmsg: OK
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | cpuconsumptiontime: 21921 s
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | nevents: 400
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | neventsw: 0
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | pid: 1914919
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | pgrp: 1914919
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | corecount: 8
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | event service: False
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348885, 12: 2348913, 23: 2348941, 32: 2349231, 34: 2349387, 3706: 2375262, 3707: 2375261, 3709: 2384315, 3710: 2384371, 3733: 2
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | --------------------------------------------------
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | 
[2025-10-10 19:57:58] 2025-10-10 23:56:59,189 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 19:57:58] 2025-10-10 23:56:59,268 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,268 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,268 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,268 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | job 6837632331 has completed (purged errors)
[2025-10-10 19:57:58] 2025-10-10 23:56:59,269 | INFO     | overall cleanup function is called
[2025-10-10 19:57:58] 2025-10-10 23:57:00,277 | INFO     | --- collectZombieJob: --- 10, [1914919]
[2025-10-10 19:57:58] 2025-10-10 23:57:00,277 | INFO     | zombie collector waiting for pid 1914919
[2025-10-10 19:57:58] 2025-10-10 23:57:00,277 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 19:57:58] 2025-10-10 23:57:00,277 | INFO     | collected zombie processes
[2025-10-10 19:57:58] 2025-10-10 23:57:00,277 | INFO     | will attempt to kill all subprocesses of pid=1914919
[2025-10-10 19:57:58] 2025-10-10 23:57:01,638 | INFO     | process IDs to be killed: [1914919] (in reverse order)
[2025-10-10 19:57:58] 2025-10-10 23:57:02,048 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 19:57:58] 2025-10-10 23:57:02,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 19:57:58] 2025-10-10 23:57:02,146 | INFO     | did not find any defunct processes belonging to 1914919
[2025-10-10 19:57:58] 2025-10-10 23:57:02,234 | INFO     | did not find any defunct processes belonging to 1914919
[2025-10-10 19:57:58] 2025-10-10 23:57:02,234 | INFO     | ready for new job
[2025-10-10 19:57:58] 2025-10-10 23:57:02,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 19:57:58] 2025-10-10 23:57:02,244 | INFO     | ***************************************
[2025-10-10 19:57:58] 2025-10-10 23:57:02,244 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 19:57:58] 2025-10-10 23:57:02,244 | INFO     | ***************************************
[2025-10-10 19:57:58] 2025-10-10 23:57:02,244 | INFO     | 
[2025-10-10 19:57:58] 2025-10-10 23:57:02,270 | INFO     | architecture information:
[2025-10-10 19:57:58] 2025-10-10 23:57:02,273 | INFO     | executing command: cat /etc/os-release
[2025-10-10 19:57:58] 2025-10-10 23:57:02,358 | INFO     | cat /etc/os-release:
[2025-10-10 19:57:58] NAME="CentOS Linux"
[2025-10-10 19:57:58] VERSION="7 (Core)"
[2025-10-10 19:57:58] ID="centos"
[2025-10-10 19:57:58] ID_LIKE="rhel fedora"
[2025-10-10 19:57:58] VERSION_ID="7"
[2025-10-10 19:57:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 19:57:58] ANSI_COLOR="0;31"
[2025-10-10 19:57:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 19:57:58] HOME_URL="https://www.centos.org/"
[2025-10-10 19:57:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 19:57:58] 
[2025-10-10 19:57:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 19:57:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 19:57:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 19:57:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 19:57:58] 
[2025-10-10 19:57:58] 2025-10-10 23:57:02,358 | INFO     | ***************************************
[2025-10-10 19:57:58] 2025-10-10 23:57:02,872 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 19:57:58] 2025-10-10 23:57:02,910 | INFO     | sufficient remaining disk space (166539034624 B)
[2025-10-10 19:57:58] 2025-10-10 23:57:02,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 19:57:58] 2025-10-10 23:57:02,910 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 19:57:58] 2025-10-10 23:57:02,910 | INFO     | update_server=False
[2025-10-10 19:57:58] 2025-10-10 23:57:02,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 19:57:58] 2025-10-10 23:57:02,960 | INFO     | all job control threads have been joined
[2025-10-10 19:57:58] 2025-10-10 23:57:02,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:57:58] 2025-10-10 23:57:02,992 | INFO     | aborting loop
[2025-10-10 19:57:58] 2025-10-10 23:57:03,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 19:57:58] 2025-10-10 23:57:03,826 | INFO     | all payload control threads have been joined
[2025-10-10 19:57:58] 2025-10-10 23:57:03,881 | INFO     | all data control threads have been joined
[2025-10-10 19:57:58] 2025-10-10 23:57:03,917 | INFO     | [job] retrieve thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:03,966 | INFO     | [job] control thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:03,998 | INFO     | [job] job monitor thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:04,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:04,124 | INFO     | [payload] validate_post thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:04,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:57:58] 2025-10-10 23:57:04,336 | INFO     | [job] validate thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:04,444 | INFO     | [payload] failed_post thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:04,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 19:57:58] 2025-10-10 23:57:04,831 | INFO     | [payload] control thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:04,887 | INFO     | [data] control thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:04,926 | INFO     | [data] copytool_in thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:05,054 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:05,054 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:05,203 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:05,256 | INFO     | [job] queue monitor thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:05,419 | INFO     | [data] copytool_out thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:08,498 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 19:57:58] 2025-10-10 23:57:32,429 | INFO     | PID=1895617 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 19:57:58] 2025-10-10 23:57:32,429 | INFO     | .. there are 71 such processes running
[2025-10-10 19:57:58] 2025-10-10 23:57:32,429 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 19:57:58] 2025-10-10 23:57:32,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 19:57:58] 2025-10-10 23:57:32,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 19:57:58] 2025-10-10 23:57:49,817 | INFO     | [monitor] cgroup control has ended
[2025-10-10 19:57:58] 2025-10-10 23:57:51,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244237285184)>', '<ExcThread(monitor, started 140243743262464)>']
[2025-10-10 19:57:58] 2025-10-10 23:57:51,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 19:57:58] 2025-10-10 23:57:51,549 | INFO     | [monitor] control thread has ended
[2025-10-10 19:57:58] 2025-10-10 23:57:56,353 | INFO     | all workflow threads have been joined
[2025-10-10 19:57:58] 2025-10-10 23:57:56,353 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 19:57:58] 2025-10-10 23:57:56,353 | INFO     | traces error code: 0
[2025-10-10 19:57:58] 2025-10-10 23:57:56,353 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 19:57:58] 2025-10-10 23:57:56,992 [wrapper] ==== pilot stdout END ====
[2025-10-10 19:57:58] 2025-10-10 23:57:57,029 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 19:57:58] 2025-10-10 23:57:57,079 [wrapper] pilotpid: 1895617
[2025-10-10 19:57:58] 2025-10-10 23:57:57,112 [wrapper] Pilot exit status: 0
[2025-10-10 19:57:58] 2025-10-10 23:57:57,218 [wrapper] pandaids: 6837632331
[2025-10-10 19:57:58] 2025-10-10 23:57:57,758 [wrapper] cleanup supervisor_pilot 2829091 1895618
[2025-10-10 19:57:58] 2025-10-10 23:57:57,772 [wrapper] Test setup, not cleaning
[2025-10-10 19:57:58] 2025-10-10 23:57:57,795 [wrapper] apfmon messages muted
[2025-10-10 19:57:58] 2025-10-10 23:57:57,811 [wrapper] ==== wrapper stdout END ====
[2025-10-10 19:57:58] 2025-10-10 23:57:57,843 [wrapper] ==== wrapper stderr END ====
[2025-10-10 19:57:58]  *** Error codes and diagnostics ***
[2025-10-10 19:57:58]     "exeErrorCode": 0,
[2025-10-10 19:57:58]     "exeErrorDiag": "",
[2025-10-10 19:57:58]     "pilotErrorCode": 0,
[2025-10-10 19:57:58]     "pilotErrorDiag": "",
[2025-10-10 19:57:58]  *** Listing of results directory ***
[2025-10-10 19:57:58] total 409720
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 10:05 pilot3.tar.gz
[2025-10-10 19:57:58] -rwx------. 1 boincer umatlas     36292 Oct 10 10:27 runpilot2-wrapper.sh
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 10:27 queuedata.json
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas       100 Oct 10 18:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 19:57:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 18:52 run_atlas
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas       105 Oct 10 18:52 job.xml
[2025-10-10 19:57:58] -rw-r--r--. 2 boincer umatlas 221302934 Oct 10 18:52 EVNT.46676267._001623.pool.root.1
[2025-10-10 19:57:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:52 start_atlas.sh
[2025-10-10 19:57:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 18:52 shared
[2025-10-10 19:57:58] -rw-r--r--. 2 boincer umatlas    569677 Oct 10 18:52 input.tar.gz
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas         0 Oct 10 18:52 boinc_lockfile
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 18:52 pandaJob.out
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas    975517 Oct 10 18:53 agis_schedconf.cvmfs.json
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas   1560580 Oct 10 18:53 agis_ddmendpoints.agis.ALL.json
[2025-10-10 19:57:58] drwx------. 5 boincer umatlas      4096 Oct 10 18:53 pilot3
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas      7161 Oct 10 19:54 init_data.xml
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas       529 Oct 10 19:55 boinc_task_state.xml
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas 192664194 Oct 10 19:56 HITS.46676269._040012.pool.root.1
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas      1035 Oct 10 19:56 memory_monitor_summary.json
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas    316019 Oct 10 19:56 log.46676269._040012.job.log.tgz.1
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas        95 Oct 10 19:56 pilot_heartbeat.json
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas      7774 Oct 10 19:56 heartbeat.json
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas      4825 Oct 10 19:57 pilotlog.txt
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 19:57 boinc_mmap_file
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas        27 Oct 10 19:57 wrapper_checkpoint.txt
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas    523202 Oct 10 19:57 log.46676269._040012.job.log.1
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas       357 Oct 10 19:57 output.list
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas       620 Oct 10 19:57 runtime_log
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas    860160 Oct 10 19:57 result.tar.gz
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas      8698 Oct 10 19:57 runtime_log.err
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas       651 Oct 10 19:57 l1rLDmFHTR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuadNDmlCToon.diag
[2025-10-10 19:57:58] -rw-r--r--. 1 boincer umatlas     22338 Oct 10 19:57 stderr.txt
[2025-10-10 19:57:58] HITS file was successfully produced:
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas 192664194 Oct 10 19:56 shared/HITS.pool.root.1
[2025-10-10 19:57:58]  *** Contents of shared directory: ***
[2025-10-10 19:57:58] total 405692
[2025-10-10 19:57:58] -rw-r--r--. 2 boincer umatlas 221302934 Oct 10 18:52 ATLAS.root_0
[2025-10-10 19:57:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:52 start_atlas.sh
[2025-10-10 19:57:58] -rw-r--r--. 2 boincer umatlas    569677 Oct 10 18:52 input.tar.gz
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas 192664194 Oct 10 19:56 HITS.pool.root.1
[2025-10-10 19:57:58] -rw-------. 1 boincer umatlas    860160 Oct 10 19:57 result.tar.gz
19:57:59 (1883591): run_atlas exited; CPU time 22069.423787
19:57:59 (1883591): called boinc_finish(0)

</stderr_txt>
]]>

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