Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
23:26:03 (1981052): wrapper (7.7.26015): starting
23:26:03 (1981052): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 23:26:03] Arguments: --nthreads 12
[2025-10-10 23:26:03] Threads: 12
[2025-10-10 23:26:03] Checking for CVMFS
[2025-10-10 23:26:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 23:26:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 23:26:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 23:26:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 23:26:04] 2.11.0.0 3299214 839 82924 151565 3 57 4983146 6144000 14768 130560 0 16482042 100.000 33607 186 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-10 23:26:04] CVMFS is ok
[2025-10-10 23:26:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 23:26:04] Checking for apptainer binary...
[2025-10-10 23:26:04] apptainer is not installed, using version from CVMFS
[2025-10-10 23:26:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 23:26:05] radiat0r
[2025-10-10 23:26:05] apptainer works
[2025-10-10 23:26:05] Set ATHENA_PROC_NUMBER=12
[2025-10-10 23:26:05] Set ATHENA_CORE_NUMBER=12
[2025-10-10 23:26:05] Starting ATLAS job with PandaID=6830778246
[2025-10-10 23:26:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 00:13:31]  *** The last 200 lines of the pilot log: ***
[2025-10-11 00:13:31] 2025-10-11 00:12:34,669 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16510 B
[2025-10-11 00:13:31] 2025-10-11 00:12:34,669 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-11 00:13:31] 2025-10-11 00:12:34,702 | INFO     | sufficient remaining disk space (1725356310528 B)
[2025-10-11 00:13:31] 2025-10-11 00:12:34,703 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-11 00:13:31] 2025-10-11 00:12:34,704 | INFO     | size of work directory /var/lib/boinc/slots/12/PanDA_Pilot-6830778246: 4809364 B (within 2537553920 B limit)
[2025-10-11 00:13:31] 2025-10-11 00:12:34,704 | INFO     | pfn file=/var/lib/boinc/slots/12/PanDA_Pilot-6830778246/HITS.46376905._074603.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-11 00:13:31] 2025-10-11 00:12:34,704 | INFO     | total size of present files: 0 B (workdir size: 4809364 B)
[2025-10-11 00:13:31] 2025-10-11 00:12:34,704 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/12/PanDA_Pilot-6830778246/HITS.46376905._074603.pool.root.1 since it does not exist
[2025-10-11 00:13:31] 2025-10-11 00:12:35,550 | INFO     | number of running child processes to parent process 1996480: 1
[2025-10-11 00:13:31] 2025-10-11 00:12:35,551 | INFO     | maximum number of monitored processes: 6
[2025-10-11 00:13:31] 2025-10-11 00:12:35,880 | INFO     | time since job start (2774s) is within the limit (172800.0s)
[2025-10-11 00:13:31] 2025-10-11 00:12:36,942 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 00:13:31] 2025-10-11 00:12:38,015 | INFO     | PID=1985757 has CPU usage=25.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 00:13:31] 2025-10-11 00:12:38,015 | INFO     | .. there are 17 such processes running
[2025-10-11 00:13:31] 2025-10-11 00:12:38,054 | INFO     | monitor loop #195: job 0:6830778246 is in state 'finished'
[2025-10-11 00:13:31] 2025-10-11 00:12:38,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 00:13:31] 2025-10-11 00:12:38,947 | INFO     | job 6830778246 has state=finished
[2025-10-11 00:13:31] 2025-10-11 00:12:38,947 | INFO     | preparing for final server update for job 6830778246 in state='finished'
[2025-10-11 00:13:31] 2025-10-11 00:12:38,948 | INFO     | this job has now completed (state=finished)
[2025-10-11 00:13:31] 2025-10-11 00:12:38,948 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 00:13:31] 2025-10-11 00:12:38,948 | INFO     | log transfer has been attempted: DONE
[2025-10-11 00:13:31] 2025-10-11 00:12:38,948 | INFO     | job 6830778246 has finished - writing final server update
[2025-10-11 00:13:31] 2025-10-11 00:12:38,948 | INFO     | total number of processed events: 400 (read)
[2025-10-11 00:13:31] 2025-10-11 00:12:38,951 | INFO     | executing command: lscpu
[2025-10-11 00:13:31] 2025-10-11 00:12:39,016 | INFO     | time since job start (2778s) is within the limit (172800.0s)
[2025-10-11 00:13:31] 2025-10-11 00:12:39,017 | INFO     | 2780s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 00:13:31] 2025-10-11 00:12:39,158 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 00:13:31] 2025-10-11 00:12:40,558 | INFO     | monitor loop #196: job 0:6830778246 is in state 'finished'
[2025-10-11 00:13:31] 2025-10-11 00:12:40,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 00:13:31] 2025-10-11 00:12:41,020 | INFO     | time since job start (2780s) is within the limit (172800.0s)
[2025-10-11 00:13:31] 2025-10-11 00:12:43,023 | INFO     | time since job start (2782s) is within the limit (172800.0s)
[2025-10-11 00:13:31] 2025-10-11 00:12:43,062 | INFO     | monitor loop #197: job 0:6830778246 is in state 'finished'
[2025-10-11 00:13:31] 2025-10-11 00:12:43,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 00:13:31] 2025-10-11 00:12:45,027 | INFO     | time since job start (2784s) is within the limit (172800.0s)
[2025-10-11 00:13:31] 2025-10-11 00:12:45,565 | INFO     | monitor loop #198: job 0:6830778246 is in state 'finished'
[2025-10-11 00:13:31] 2025-10-11 00:12:45,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 00:13:31] 2025-10-11 00:12:46,684 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 00:13:31] 2025-10-11 00:12:46,748 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2379.9336132812496
[2025-10-11 00:13:31] 2025-10-11 00:12:46,843 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6830778246/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 00:13:31] 2025-10-11 00:12:46,844 | INFO     | extracted standard info from prmon json
[2025-10-11 00:13:31] 2025-10-11 00:12:46,844 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 00:13:31] 2025-10-11 00:12:46,844 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 00:13:31] 2025-10-11 00:12:46,845 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 00:13:31] 2025-10-11 00:12:46,845 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 00:13:31] 2025-10-11 00:12:46,846 | INFO     | fitting pss+swap vs Time
[2025-10-11 00:13:31] 2025-10-11 00:12:46,847 | INFO     | sum of square deviations: 17003109.5
[2025-10-11 00:13:31] 2025-10-11 00:12:46,847 | INFO     | sum of deviations: -1046179707.0
[2025-10-11 00:13:31] 2025-10-11 00:12:46,847 | INFO     | mean x: 1760140249.5
[2025-10-11 00:13:31] 2025-10-11 00:12:46,847 | INFO     | mean y: 2722332.8421052634
[2025-10-11 00:13:31] 2025-10-11 00:12:46,847 | INFO     | -- intersect: 108301913754.31808
[2025-10-11 00:13:31] 2025-10-11 00:12:46,847 | INFO     | intersect: 108301913754.31808
[2025-10-11 00:13:31] 2025-10-11 00:12:46,847 | INFO     | chi2: 0.0014449304422166655
[2025-10-11 00:13:31] 2025-10-11 00:12:46,848 | INFO     | -- intersect: 108301913754.31808
[2025-10-11 00:13:31] 2025-10-11 00:12:46,848 | INFO     | current memory leak: -61.53 B/s (using 38 data points, chi2=0.00)
[2025-10-11 00:13:31] 2025-10-11 00:12:46,848 | INFO     | could have reported an average CPU frequency of 2359 MHz (5 samples)
[2025-10-11 00:13:31] 2025-10-11 00:12:46,848 | INFO     | ..............................
[2025-10-11 00:13:31] 2025-10-11 00:12:46,848 | INFO     | . Timing measurements:
[2025-10-11 00:13:31] 2025-10-11 00:12:46,848 | INFO     | . get job = 0 s
[2025-10-11 00:13:31] 2025-10-11 00:12:46,848 | INFO     | . initial setup = 2 s
[2025-10-11 00:13:31] 2025-10-11 00:12:46,849 | INFO     | . payload setup = 8 s
[2025-10-11 00:13:31] 2025-10-11 00:12:46,849 | INFO     | . stage-in = 0 s
[2025-10-11 00:13:31] 2025-10-11 00:12:46,849 | INFO     | . payload execution = 2741 s
[2025-10-11 00:13:31] 2025-10-11 00:12:46,849 | INFO     | . stage-out = 0 s
[2025-10-11 00:13:31] 2025-10-11 00:12:46,849 | INFO     | . log creation = 0 s
[2025-10-11 00:13:31] 2025-10-11 00:12:46,849 | INFO     | ..............................
[2025-10-11 00:13:31] 2025-10-11 00:12:46,948 | INFO     | 
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | job summary report
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | --------------------------------------------------
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | PanDA job id: 6830778246
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | task id: 46376905
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | errors: (none)
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | pilot state: finished 
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | transexitcode: 0
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | exeerrorcode: 0
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | exeerrordiag: 
[2025-10-11 00:13:31] 2025-10-11 00:12:46,949 | INFO     | exitcode: 0
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | exitmsg: OK
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | cpuconsumptiontime: 28763 s
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | nevents: 400
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | neventsw: 0
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | pid: 1996480
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | pgrp: 1996480
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | corecount: 12
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | event service: False
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | sizes: {0: 2348817, 8: 2349079, 11: 2349107, 2753: 2374409, 2754: 2383409, 2757: 2383493, 2767: 2383847}
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | --------------------------------------------------
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | 
[2025-10-11 00:13:31] 2025-10-11 00:12:46,950 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-11 00:13:31] 2025-10-11 00:12:46,984 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,984 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,984 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,984 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,984 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 00:13:31] 2025-10-11 00:12:46,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 00:13:31] 2025-10-11 00:12:46,986 | INFO     | job 6830778246 has completed (purged errors)
[2025-10-11 00:13:31] 2025-10-11 00:12:46,986 | INFO     | overall cleanup function is called
[2025-10-11 00:13:31] 2025-10-11 00:12:47,994 | INFO     | --- collectZombieJob: --- 10, [1996480]
[2025-10-11 00:13:31] 2025-10-11 00:12:47,995 | INFO     | zombie collector waiting for pid 1996480
[2025-10-11 00:13:31] 2025-10-11 00:12:47,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 00:13:31] 2025-10-11 00:12:47,995 | INFO     | collected zombie processes
[2025-10-11 00:13:31] 2025-10-11 00:12:47,995 | INFO     | will attempt to kill all subprocesses of pid=1996480
[2025-10-11 00:13:31] 2025-10-11 00:12:48,860 | INFO     | process IDs to be killed: [1996480] (in reverse order)
[2025-10-11 00:13:31] 2025-10-11 00:12:49,149 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 00:13:31] 2025-10-11 00:12:49,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 00:13:31] 2025-10-11 00:12:49,179 | INFO     | did not find any defunct processes belonging to 1996480
[2025-10-11 00:13:31] 2025-10-11 00:12:49,208 | INFO     | did not find any defunct processes belonging to 1996480
[2025-10-11 00:13:31] 2025-10-11 00:12:49,208 | INFO     | ready for new job
[2025-10-11 00:13:31] 2025-10-11 00:12:49,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 00:13:31] 2025-10-11 00:12:49,213 | INFO     | ***************************************
[2025-10-11 00:13:31] 2025-10-11 00:12:49,213 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 00:13:31] 2025-10-11 00:12:49,213 | INFO     | ***************************************
[2025-10-11 00:13:31] 2025-10-11 00:12:49,213 | INFO     | 
[2025-10-11 00:13:31] 2025-10-11 00:12:49,254 | INFO     | architecture information:
[2025-10-11 00:13:31] 2025-10-11 00:12:49,255 | INFO     | executing command: cat /etc/os-release
[2025-10-11 00:13:31] 2025-10-11 00:12:49,279 | INFO     | cat /etc/os-release:
[2025-10-11 00:13:31] NAME="CentOS Linux"
[2025-10-11 00:13:31] VERSION="7 (Core)"
[2025-10-11 00:13:31] ID="centos"
[2025-10-11 00:13:31] ID_LIKE="rhel fedora"
[2025-10-11 00:13:31] VERSION_ID="7"
[2025-10-11 00:13:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 00:13:31] ANSI_COLOR="0;31"
[2025-10-11 00:13:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 00:13:31] HOME_URL="https://www.centos.org/"
[2025-10-11 00:13:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 00:13:31] 
[2025-10-11 00:13:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 00:13:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 00:13:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 00:13:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 00:13:31] 
[2025-10-11 00:13:31] 2025-10-11 00:12:49,280 | INFO     | ***************************************
[2025-10-11 00:13:31] 2025-10-11 00:12:49,781 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-11 00:13:31] 2025-10-11 00:12:49,811 | INFO     | sufficient remaining disk space (1725344776192 B)
[2025-10-11 00:13:31] 2025-10-11 00:12:49,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 00:13:31] 2025-10-11 00:12:49,812 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 00:13:31] 2025-10-11 00:12:49,812 | INFO     | update_server=False
[2025-10-11 00:13:31] 2025-10-11 00:12:49,812 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 00:13:31] 2025-10-11 00:12:49,812 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 00:13:31] 2025-10-11 00:12:49,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 00:13:31] 2025-10-11 00:12:49,813 | INFO     | aborting loop
[2025-10-11 00:13:31] 2025-10-11 00:12:50,183 | INFO     | all job control threads have been joined
[2025-10-11 00:13:31] 2025-10-11 00:12:50,292 | INFO     | all payload control threads have been joined
[2025-10-11 00:13:31] 2025-10-11 00:12:50,371 | INFO     | all data control threads have been joined
[2025-10-11 00:13:31] 2025-10-11 00:12:50,815 | INFO     | [job] retrieve thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:50,819 | INFO     | [job] job monitor thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:50,857 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:51,126 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:51,184 | INFO     | [data] copytool_in thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:51,186 | INFO     | [job] control thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:51,297 | INFO     | [payload] control thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:51,335 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:51,374 | INFO     | [data] control thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:51,582 | INFO     | [payload] validate_post thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:51,818 | INFO     | [data] copytool_out thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:51,890 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:51,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 00:13:31] 2025-10-11 00:12:52,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 00:13:31] 2025-10-11 00:12:52,194 | INFO     | [job] validate thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:52,226 | INFO     | [payload] failed_post thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:52,958 | INFO     | [job] queue monitor thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:12:56,066 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 00:13:31] 2025-10-11 00:13:19,108 | INFO     | PID=1985757 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 00:13:31] 2025-10-11 00:13:19,109 | INFO     | .. there are 17 such processes running
[2025-10-11 00:13:31] 2025-10-11 00:13:19,110 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 00:13:31] 2025-10-11 00:13:19,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 00:13:31] 2025-10-11 00:13:19,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 00:13:31] 2025-10-11 00:13:24,658 | INFO     | [monitor] cgroup control has ended
[2025-10-11 00:13:31] 2025-10-11 00:13:25,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701073053504)>', '<ExcThread(monitor, started 140700486190848)>']
[2025-10-11 00:13:31] 2025-10-11 00:13:26,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 00:13:31] 2025-10-11 00:13:26,139 | INFO     | [monitor] control thread has ended
[2025-10-11 00:13:31] 2025-10-11 00:13:30,690 | INFO     | all workflow threads have been joined
[2025-10-11 00:13:31] 2025-10-11 00:13:30,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 00:13:31] 2025-10-11 00:13:30,691 | INFO     | traces error code: 0
[2025-10-11 00:13:31] 2025-10-11 00:13:30,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 00:13:31] 2025-10-11 00:13:30,846 [wrapper] ==== pilot stdout END ====
[2025-10-11 00:13:31] 2025-10-11 00:13:30,851 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 00:13:31] 2025-10-11 00:13:30,854 [wrapper] pilotpid: 1985757
[2025-10-11 00:13:31] 2025-10-11 00:13:30,857 [wrapper] Pilot exit status: 0
[2025-10-11 00:13:31] 2025-10-11 00:13:30,870 [wrapper] pandaids: 6830778246
[2025-10-11 00:13:31] 2025-10-11 00:13:31,060 [wrapper] cleanup supervisor_pilot 2417908 1985758
[2025-10-11 00:13:31] 2025-10-11 00:13:31,065 [wrapper] Test setup, not cleaning
[2025-10-11 00:13:31] 2025-10-11 00:13:31,069 [wrapper] apfmon messages muted
[2025-10-11 00:13:31] 2025-10-11 00:13:31,073 [wrapper] ==== wrapper stdout END ====
[2025-10-11 00:13:31] 2025-10-11 00:13:31,077 [wrapper] ==== wrapper stderr END ====
[2025-10-11 00:13:31]  *** Error codes and diagnostics ***
[2025-10-11 00:13:31]     "exeErrorCode": 0,
[2025-10-11 00:13:31]     "exeErrorDiag": "",
[2025-10-11 00:13:31]     "pilotErrorCode": 0,
[2025-10-11 00:13:31]     "pilotErrorDiag": "",
[2025-10-11 00:13:31]  *** Listing of results directory ***
[2025-10-11 00:13:31] total 393804
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc    552446 Oct  5 03:07 pilot3.tar.gz
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc      5112 Oct  5 03:12 queuedata.json
[2025-10-11 00:13:31] -rwx------ 1 boinc boinc     36292 Oct  5 03:14 runpilot2-wrapper.sh
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc       100 Oct 10 23:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 00:13:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 23:26 run_atlas
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc       105 Oct 10 23:26 job.xml
[2025-10-11 00:13:31] -rw-r--r-- 2 boinc boinc     15120 Oct 10 23:26 start_atlas.sh
[2025-10-11 00:13:31] drwxrwx--x 2 boinc boinc      4096 Oct 10 23:26 shared
[2025-10-11 00:13:31] -rw-r--r-- 2 boinc boinc    565603 Oct 10 23:26 input.tar.gz
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc      9396 Oct 10 23:26 init_data.xml
[2025-10-11 00:13:31] -rw-r--r-- 2 boinc boinc 215603096 Oct 10 23:26 EVNT.46376901._002721.pool.root.1
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc         0 Oct 10 23:26 boinc_setup_complete
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc         0 Oct 10 23:26 boinc_lockfile
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc      2519 Oct 10 23:26 pandaJob.out
[2025-10-11 00:13:31] -rw------- 1 boinc boinc    975525 Oct 10 23:26 agis_schedconf.cvmfs.json
[2025-10-11 00:13:31] -rw------- 1 boinc boinc   1560580 Oct 10 23:26 agis_ddmendpoints.agis.ALL.json
[2025-10-11 00:13:31] drwx------ 4 boinc boinc      4096 Oct 10 23:26 pilot3
[2025-10-11 00:13:31] -rw------- 1 boinc boinc 182170825 Oct 11 00:11 HITS.46376905._074603.pool.root.1
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc       529 Oct 11 00:11 boinc_task_state.xml
[2025-10-11 00:13:31] -rw------- 1 boinc boinc      1030 Oct 11 00:12 memory_monitor_summary.json
[2025-10-11 00:13:31] -rw------- 1 boinc boinc    370054 Oct 11 00:12 log.46376905._074603.job.log.tgz.1
[2025-10-11 00:13:31] -rw------- 1 boinc boinc      7749 Oct 11 00:12 heartbeat.json
[2025-10-11 00:13:31] -rw------- 1 boinc boinc        95 Oct 11 00:13 pilot_heartbeat.json
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc      8192 Oct 11 00:13 boinc_mmap_file
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc        27 Oct 11 00:13 wrapper_checkpoint.txt
[2025-10-11 00:13:31] -rw------- 1 boinc boinc      4827 Oct 11 00:13 pilotlog.txt
[2025-10-11 00:13:31] -rw------- 1 boinc boinc    419431 Oct 11 00:13 log.46376905._074603.job.log.1
[2025-10-11 00:13:31] -rw------- 1 boinc boinc       357 Oct 11 00:13 output.list
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc       620 Oct 11 00:13 runtime_log
[2025-10-11 00:13:31] -rw------- 1 boinc boinc    808960 Oct 11 00:13 result.tar.gz
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc      8672 Oct 11 00:13 runtime_log.err
[2025-10-11 00:13:31] -rw------- 1 boinc boinc       644 Oct 11 00:13 m4qKDm9NUP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNlNNDm6y8bwm.diag
[2025-10-11 00:13:31] -rw-r--r-- 1 boinc boinc     22159 Oct 11 00:13 stderr.txt
[2025-10-11 00:13:31] HITS file was successfully produced:
[2025-10-11 00:13:31] -rw------- 1 boinc boinc 182170825 Oct 11 00:11 shared/HITS.pool.root.1
[2025-10-11 00:13:31]  *** Contents of shared directory: ***
[2025-10-11 00:13:31] total 389828
[2025-10-11 00:13:31] -rw-r--r-- 2 boinc boinc     15120 Oct 10 23:26 start_atlas.sh
[2025-10-11 00:13:31] -rw-r--r-- 2 boinc boinc    565603 Oct 10 23:26 input.tar.gz
[2025-10-11 00:13:31] -rw-r--r-- 2 boinc boinc 215603096 Oct 10 23:26 ATLAS.root_0
[2025-10-11 00:13:31] -rw------- 1 boinc boinc 182170825 Oct 11 00:11 HITS.pool.root.1
[2025-10-11 00:13:31] -rw------- 1 boinc boinc    808960 Oct 11 00:13 result.tar.gz
00:13:32 (1981052): run_atlas exited; CPU time 28926.485633
00:13:32 (1981052): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN