Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:48:24 (1354770): wrapper (7.7.26015): starting
07:48:24 (1354770): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 07:48:24] Arguments: --nthreads 12
[2025-10-11 07:48:24] Threads: 12
[2025-10-11 07:48:24] Checking for CVMFS
[2025-10-11 07:48:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:48:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:48:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:48:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:48:27] 2.13.2.0 8216 23055 258004 151573 1 413 34954351 46080001 52560 130560 0 157237157 99.887 46831054 22634 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-10-11 07:48:27] CVMFS is ok
[2025-10-11 07:48:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:48:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:48:27] Further information can be found at the LHC@home message board.
[2025-10-11 07:48:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:48:27] Checking for apptainer binary...
[2025-10-11 07:48:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:48:27] Running /usr/bin/apptainer --version
[2025-10-11 07:48:28] apptainer version 1.4.2-1.el9
[2025-10-11 07:48:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:48:28] mff2103.farm.particle.cz
[2025-10-11 07:48:28] apptainer works
[2025-10-11 07:48:28] Set ATHENA_PROC_NUMBER=12
[2025-10-11 07:48:28] Set ATHENA_CORE_NUMBER=12
[2025-10-11 07:52:55] Starting ATLAS job with PandaID=6837631192
[2025-10-11 07:52:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:54:57]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:54:57] 2025-10-11 07:52:58,980 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,981 | INFO     | sum of deviations: 55951880096.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,981 | INFO     | mean x: 1760165689.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,981 | INFO     | mean y: 2483927.132743363
[2025-10-11 09:54:57] 2025-10-11 07:52:58,981 | INFO     | -- intersect: -220132209843.94153
[2025-10-11 09:54:57] 2025-10-11 07:52:58,981 | INFO     | intersect: -220132209843.94153
[2025-10-11 09:54:57] 2025-10-11 07:52:58,981 | INFO     | chi2: 6.720205129599372
[2025-10-11 09:54:57] 2025-10-11 07:52:58,982 | INFO     | sum of square deviations: 390582207.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,982 | INFO     | sum of deviations: 61080263037.5
[2025-10-11 09:54:57] 2025-10-11 07:52:58,982 | INFO     | mean x: 1760165536.5
[2025-10-11 09:54:57] 2025-10-11 07:52:58,982 | INFO     | mean y: 2496902.342592593
[2025-10-11 09:54:57] 2025-10-11 07:52:58,982 | INFO     | -- intersect: -275256775107.87036
[2025-10-11 09:54:57] 2025-10-11 07:52:58,983 | INFO     | intersect: -275256775107.87036
[2025-10-11 09:54:57] 2025-10-11 07:52:58,983 | INFO     | chi2: 5.969193341150775
[2025-10-11 09:54:57] 2025-10-11 07:52:58,983 | INFO     | current chi2=5.969193341150775 (change=11.17542952879132 %)
[2025-10-11 09:54:57] 2025-10-11 07:52:58,983 | INFO     | right removable region: 107
[2025-10-11 09:54:57] 2025-10-11 07:52:58,983 | INFO     | sum of square deviations: 390582207.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,988 | INFO     | sum of deviations: 16730046477.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,988 | INFO     | mean x: 1760165841.5
[2025-10-11 09:54:57] 2025-10-11 07:52:58,988 | INFO     | mean y: 2589103.574074074
[2025-10-11 09:54:57] 2025-10-11 07:52:58,988 | INFO     | -- intersect: -75391670562.5423
[2025-10-11 09:54:57] 2025-10-11 07:52:58,988 | INFO     | intersect: -75391670562.5423
[2025-10-11 09:54:57] 2025-10-11 07:52:58,988 | INFO     | chi2: 1.9134056636846564
[2025-10-11 09:54:57] 2025-10-11 07:52:58,989 | INFO     | current chi2=1.9134056636846564 (change=71.52757056094916 %)
[2025-10-11 09:54:57] 2025-10-11 07:52:58,989 | INFO     | sum of square deviations: 338804492.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,989 | INFO     | sum of deviations: -1033858926.9999962
[2025-10-11 09:54:57] 2025-10-11 07:52:58,989 | INFO     | mean x: 1760165994.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,990 | INFO     | mean y: 2640894.427184466
[2025-10-11 09:54:57] 2025-10-11 07:52:58,990 | INFO     | -- intersect: 5373771941.587922
[2025-10-11 09:54:57] 2025-10-11 07:52:58,990 | INFO     | intersect: 5373771941.587922
[2025-10-11 09:54:57] 2025-10-11 07:52:58,990 | INFO     | chi2: 0.916678840401979
[2025-10-11 09:54:57] 2025-10-11 07:52:58,990 | INFO     | current chi2=0.916678840401979 (change=52.09176716678442 %)
[2025-10-11 09:54:57] 2025-10-11 07:52:58,990 | INFO     | sum of square deviations: 291817564.5
[2025-10-11 09:54:57] 2025-10-11 07:52:58,991 | INFO     | sum of deviations: -4802271543.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,991 | INFO     | mean x: 1760166146.5
[2025-10-11 09:54:57] 2025-10-11 07:52:58,991 | INFO     | mean y: 2652903.1428571427
[2025-10-11 09:54:57] 2025-10-11 07:52:58,991 | INFO     | -- intersect: 28968681081.64518
[2025-10-11 09:54:57] 2025-10-11 07:52:58,991 | INFO     | intersect: 28968681081.64518
[2025-10-11 09:54:57] 2025-10-11 07:52:58,991 | INFO     | chi2: 0.8569643462385161
[2025-10-11 09:54:57] 2025-10-11 07:52:58,996 | INFO     | current chi2=0.8569643462385161 (change=6.514221942471919 %)
[2025-10-11 09:54:57] 2025-10-11 07:52:58,996 | INFO     | left removable region: 30
[2025-10-11 09:54:57] 2025-10-11 07:52:58,996 | INFO     | sum of square deviations: 141539398.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,996 | INFO     | sum of deviations: 1137823362.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,996 | INFO     | mean x: 1760166421.0
[2025-10-11 09:54:57] 2025-10-11 07:52:58,996 | INFO     | mean y: 2681721.922077922
[2025-10-11 09:54:57] 2025-10-11 07:52:59,000 | INFO     | -- intersect: -14147148665.38625
[2025-10-11 09:54:57] 2025-10-11 07:52:59,001 | INFO     | intersect: -14147148665.38625
[2025-10-11 09:54:57] 2025-10-11 07:52:59,001 | INFO     | chi2: 0.0003948925000242418
[2025-10-11 09:54:57] 2025-10-11 07:52:59,001 | INFO     | -- intersect: -14147148665.38625
[2025-10-11 09:54:57] 2025-10-11 07:52:59,001 | INFO     | current memory leak: 8.04 B/s (using 77 data points, chi2=0.00)
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | could have reported an average CPU frequency of 2829 MHz (7 samples)
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | ..............................
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | . Timing measurements:
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | . get job = 0 s
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | . initial setup = 6 s
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | . payload setup = 69 s
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | . stage-in = 0 s
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | . payload execution = 6898 s
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | . stage-out = 2 s
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | . log creation = 0 s
[2025-10-11 09:54:57] 2025-10-11 07:52:59,002 | INFO     | ..............................
[2025-10-11 09:54:57] 2025-10-11 07:52:59,195 | INFO     | 
[2025-10-11 09:54:57] 2025-10-11 07:52:59,196 | INFO     | job summary report
[2025-10-11 09:54:57] 2025-10-11 07:52:59,196 | INFO     | --------------------------------------------------
[2025-10-11 09:54:57] 2025-10-11 07:52:59,196 | INFO     | PanDA job id: 6837631192
[2025-10-11 09:54:57] 2025-10-11 07:52:59,196 | INFO     | task id: 46676269
[2025-10-11 09:54:57] 2025-10-11 07:52:59,196 | INFO     | errors: (none)
[2025-10-11 09:54:57] 2025-10-11 07:52:59,196 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:54:57] 2025-10-11 07:52:59,196 | INFO     | pilot state: finished 
[2025-10-11 09:54:57] 2025-10-11 07:52:59,196 | INFO     | transexitcode: 0
[2025-10-11 09:54:57] 2025-10-11 07:52:59,196 | INFO     | exeerrorcode: 0
[2025-10-11 09:54:57] 2025-10-11 07:52:59,196 | INFO     | exeerrordiag: 
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | exitcode: 0
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | exitmsg: OK
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | cpuconsumptiontime: 39204 s
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | nevents: 400
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | neventsw: 0
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | pid: 1393346
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | pgrp: 1393346
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | corecount: 12
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | event service: False
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | sizes: {0: 2348029, 1: 2348715, 2: 2348914, 13: 2348914, 24: 2348970, 34: 2348998, 43: 2349416, 45: 2349444, 6972: 2376676, 6974: 2385676, 6976: 2385732, 7021: 238
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | --------------------------------------------------
[2025-10-11 09:54:57] 2025-10-11 07:52:59,197 | INFO     | 
[2025-10-11 09:54:57] 2025-10-11 07:52:59,198 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-10-11 09:54:57] 2025-10-11 07:52:59,303 | INFO     | time since job start (7112s) is within the limit (172800.0s)
[2025-10-11 09:54:57] 2025-10-11 07:52:59,395 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,395 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,395 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,395 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:54:57] 2025-10-11 07:52:59,396 | INFO     | job 6837631192 has completed (purged errors)
[2025-10-11 09:54:57] 2025-10-11 07:52:59,397 | INFO     | overall cleanup function is called
[2025-10-11 09:54:57] 2025-10-11 07:53:00,411 | INFO     | --- collectZombieJob: --- 10, [1393346]
[2025-10-11 09:54:57] 2025-10-11 07:53:00,412 | INFO     | zombie collector waiting for pid 1393346
[2025-10-11 09:54:57] 2025-10-11 07:53:00,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:54:57] 2025-10-11 07:53:00,412 | INFO     | collected zombie processes
[2025-10-11 09:54:57] 2025-10-11 07:53:00,412 | INFO     | will attempt to kill all subprocesses of pid=1393346
[2025-10-11 09:54:57] 2025-10-11 07:53:01,571 | INFO     | process IDs to be killed: [1393346] (in reverse order)
[2025-10-11 09:54:57] 2025-10-11 07:53:02,146 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:54:57] 2025-10-11 07:53:02,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:54:57] 2025-10-11 07:53:02,216 | INFO     | did not find any defunct processes belonging to 1393346
[2025-10-11 09:54:57] 2025-10-11 07:53:02,274 | INFO     | did not find any defunct processes belonging to 1393346
[2025-10-11 09:54:57] 2025-10-11 07:53:02,274 | INFO     | ready for new job
[2025-10-11 09:54:57] 2025-10-11 07:53:02,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:54:57] 2025-10-11 07:53:02,276 | INFO     | ***************************************
[2025-10-11 09:54:57] 2025-10-11 07:53:02,276 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:54:57] 2025-10-11 07:53:02,287 | INFO     | ***************************************
[2025-10-11 09:54:57] 2025-10-11 07:53:02,288 | INFO     | 
[2025-10-11 09:54:57] 2025-10-11 07:53:02,302 | INFO     | architecture information:
[2025-10-11 09:54:57] 2025-10-11 07:53:02,311 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:54:57] 2025-10-11 07:53:02,423 | INFO     | cat /etc/os-release:
[2025-10-11 09:54:57] NAME="CentOS Linux"
[2025-10-11 09:54:57] VERSION="7 (Core)"
[2025-10-11 09:54:57] ID="centos"
[2025-10-11 09:54:57] ID_LIKE="rhel fedora"
[2025-10-11 09:54:57] VERSION_ID="7"
[2025-10-11 09:54:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:54:57] ANSI_COLOR="0;31"
[2025-10-11 09:54:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:54:57] HOME_URL="https://www.centos.org/"
[2025-10-11 09:54:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:54:57] 
[2025-10-11 09:54:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:54:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:54:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:54:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:54:57] 
[2025-10-11 09:54:57] 2025-10-11 07:53:02,423 | INFO     | ***************************************
[2025-10-11 09:54:57] 2025-10-11 07:53:02,932 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-10-11 09:54:57] 2025-10-11 07:53:03,068 | INFO     | sufficient remaining disk space (1662795120640 B)
[2025-10-11 09:54:57] 2025-10-11 07:53:03,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:54:57] 2025-10-11 07:53:03,068 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:54:57] 2025-10-11 07:53:03,069 | INFO     | update_server=False
[2025-10-11 09:54:57] 2025-10-11 07:53:03,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:54:57] 2025-10-11 07:53:03,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:54:57] 2025-10-11 07:53:03,292 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 09:54:57] 2025-10-11 07:53:03,293 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 09:54:57] 2025-10-11 07:53:03,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:54:57] 2025-10-11 07:53:03,293 | INFO     | will abort loop
[2025-10-11 09:54:57] 2025-10-11 07:53:03,313 | INFO     | all data control threads have been joined
[2025-10-11 09:54:57] 2025-10-11 07:53:03,621 | INFO     | all payload control threads have been joined
[2025-10-11 09:54:57] 2025-10-11 07:53:04,075 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:04,165 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:04,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:54:57] 2025-10-11 07:53:04,240 | INFO     | all job control threads have been joined
[2025-10-11 09:54:57] 2025-10-11 07:53:04,299 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:04,323 | INFO     | [data] control thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:04,626 | INFO     | [payload] control thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:04,767 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:04,866 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:04,905 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:04,965 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:05,077 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:05,144 | INFO     | [job] validate thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:05,227 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:05,246 | INFO     | [job] control thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:05,641 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:54:57] 2025-10-11 07:53:05,644 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:09,656 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:13,689 | INFO     | job.realtimelogging is not enabled
[2025-10-11 09:54:57] 2025-10-11 07:53:14,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:54:57] 2025-10-11 07:53:33,575 | INFO     | PID=1381967 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:54:57] 2025-10-11 07:53:33,575 | INFO     | .. there are 85 such processes running
[2025-10-11 09:54:57] 2025-10-11 07:53:33,576 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:54:57] 2025-10-11 07:53:33,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:54:57] 2025-10-11 07:53:33,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:54:57] 2025-10-11 07:53:38,574 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:54:57] 2025-10-11 07:53:39,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139810195601216)>', '<ExcThread(monitor, started 139809557305088)>']
[2025-10-11 09:54:57] 2025-10-11 07:53:39,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:54:57] 2025-10-11 07:53:39,622 | INFO     | [monitor] control thread has ended
[2025-10-11 09:54:57] 2025-10-11 07:53:44,285 | INFO     | all workflow threads have been joined
[2025-10-11 09:54:57] 2025-10-11 07:53:44,286 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:54:57] 2025-10-11 07:53:44,286 | INFO     | traces error code: 0
[2025-10-11 09:54:57] 2025-10-11 07:53:44,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:54:57] 2025-10-11 07:53:44,540 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:54:57] 2025-10-11 07:53:44,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:54:57] 2025-10-11 07:53:44,586 [wrapper] pilotpid: 1381967
[2025-10-11 09:54:57] 2025-10-11 07:53:44,626 [wrapper] Pilot exit status: 0
[2025-10-11 09:54:57] 2025-10-11 07:53:44,776 [wrapper] pandaids: 6837631192
[2025-10-11 09:54:57] 2025-10-11 07:53:45,098 [wrapper] cleanup supervisor_pilot 1838788 1381968
[2025-10-11 09:54:57] 2025-10-11 07:53:45,135 [wrapper] Test setup, not cleaning
[2025-10-11 09:54:57] 2025-10-11 07:53:45,170 [wrapper] apfmon messages muted
[2025-10-11 09:54:57] 2025-10-11 07:53:45,214 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:54:57] 2025-10-11 07:53:45,227 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:54:57]  *** Error codes and diagnostics ***
[2025-10-11 09:54:57]     "exeErrorCode": 0,
[2025-10-11 09:54:57]     "exeErrorDiag": "",
[2025-10-11 09:54:57]     "pilotErrorCode": 0,
[2025-10-11 09:54:57]     "pilotErrorDiag": "",
[2025-10-11 09:54:57]  *** Listing of results directory ***
[2025-10-11 09:54:57] total 410420
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc    557409 Oct 10 16:05 pilot3.tar.gz
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc      5112 Oct 10 16:06 queuedata.json
[2025-10-11 09:54:57] -rwx------ 1 boinc boinc     36292 Oct 10 16:09 runpilot2-wrapper.sh
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc       100 Oct 11 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:54:57] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 07:48 run_atlas
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc       105 Oct 11 07:48 job.xml
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc      6665 Oct 11 07:48 init_data.xml
[2025-10-11 09:54:57] -rw-r--r-- 2 boinc boinc 220120945 Oct 11 07:48 EVNT.46676267._001609.pool.root.1
[2025-10-11 09:54:57] drwxrwx--x 2 boinc boinc      4096 Oct 11 07:48 shared
[2025-10-11 09:54:57] -rw-r--r-- 2 boinc boinc    569684 Oct 11 07:48 input.tar.gz
[2025-10-11 09:54:57] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:48 start_atlas.sh
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:48 boinc_lockfile
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc      2550 Oct 11 07:48 pandaJob.out
[2025-10-11 09:54:57] -rw------- 1 boinc boinc    975533 Oct 11 07:54 agis_schedconf.cvmfs.json
[2025-10-11 09:54:57] -rw------- 1 boinc boinc   1560580 Oct 11 07:54 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:54:57] drwx------ 5 boinc boinc      4096 Oct 11 07:54 pilot3
[2025-10-11 09:54:57] -rw------- 1 boinc boinc 193495194 Oct 11 09:50 HITS.46676269._039670.pool.root.1
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc       529 Oct 11 09:51 boinc_task_state.xml
[2025-10-11 09:54:57] -rw------- 1 boinc boinc      1025 Oct 11 09:52 memory_monitor_summary.json
[2025-10-11 09:54:57] -rw------- 1 boinc boinc    431035 Oct 11 09:52 log.46676269._039670.job.log.tgz.1
[2025-10-11 09:54:57] -rw------- 1 boinc boinc        95 Oct 11 09:52 pilot_heartbeat.json
[2025-10-11 09:54:57] -rw------- 1 boinc boinc      7785 Oct 11 09:52 heartbeat.json
[2025-10-11 09:54:57] -rw------- 1 boinc boinc      5085 Oct 11 09:53 pilotlog.txt
[2025-10-11 09:54:57] -rw------- 1 boinc boinc    943347 Oct 11 09:53 log.46676269._039670.job.log.1
[2025-10-11 09:54:57] -rw------- 1 boinc boinc       357 Oct 11 09:53 output.list
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc       620 Oct 11 09:53 runtime_log
[2025-10-11 09:54:57] -rw------- 1 boinc boinc   1392640 Oct 11 09:53 result.tar.gz
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc      8764 Oct 11 09:53 runtime_log.err
[2025-10-11 09:54:57] -rw------- 1 boinc boinc       663 Oct 11 09:53 gKHODmyySR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJXdNDmLlSggm.diag
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc        26 Oct 11 09:54 wrapper_checkpoint.txt
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc      8192 Oct 11 09:54 boinc_mmap_file
[2025-10-11 09:54:57] -rw-r--r-- 1 boinc boinc     21001 Oct 11 09:54 stderr.txt
[2025-10-11 09:54:57] HITS file was successfully produced:
[2025-10-11 09:54:57] -rw------- 1 boinc boinc 193495194 Oct 11 09:50 shared/HITS.pool.root.1
[2025-10-11 09:54:57]  *** Contents of shared directory: ***
[2025-10-11 09:54:57] total 405868
[2025-10-11 09:54:57] -rw-r--r-- 2 boinc boinc 220120945 Oct 11 07:48 ATLAS.root_0
[2025-10-11 09:54:57] -rw-r--r-- 2 boinc boinc    569684 Oct 11 07:48 input.tar.gz
[2025-10-11 09:54:57] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:48 start_atlas.sh
[2025-10-11 09:54:57] -rw------- 1 boinc boinc 193495194 Oct 11 09:50 HITS.pool.root.1
[2025-10-11 09:54:57] -rw------- 1 boinc boinc   1392640 Oct 11 09:53 result.tar.gz
09:54:59 (1354770): run_atlas exited; CPU time 39608.644295
09:54:59 (1354770): called boinc_finish(0)

</stderr_txt>
]]>

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