Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:26:27 (475084): wrapper (7.7.26015): starting
18:26:27 (475084): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 18:26:27] Arguments: --nthreads 8
[2025-10-10 18:26:27] Threads: 8
[2025-10-10 18:26:27] Checking for CVMFS
[2025-10-10 18:26:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 18:26:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 18:26:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 18:26:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 18:26:28] 2.13.2.0 108345 126963 588072 151564 0 260 29828845 32935937 25653 16776704 0 228468850 99.572 247844471 20738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 18:26:28] CVMFS is ok
[2025-10-10 18:26:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 18:26:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 18:26:28] Further information can be found at the LHC@home message board.
[2025-10-10 18:26:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 18:26:28] Checking for apptainer binary...
[2025-10-10 18:26:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 18:26:28] Running /usr/bin/apptainer --version
[2025-10-10 18:26:28] apptainer version 1.4.3-1.el9
[2025-10-10 18:26:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 18:26:28] c6-8-25-2.aglt2.org
[2025-10-10 18:26:28] apptainer works
[2025-10-10 18:26:28] Set ATHENA_PROC_NUMBER=8
[2025-10-10 18:26:28] Set ATHENA_CORE_NUMBER=8
[2025-10-10 18:26:28] Starting ATLAS job with PandaID=6837630662
[2025-10-10 18:26:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 21:49:14]  *** The last 200 lines of the pilot log: ***
[2025-10-10 21:49:14] 2025-10-11 01:48:28,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 21:49:14] 2025-10-11 01:48:28,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 21:49:14] 2025-10-11 01:48:28,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 21:49:14] 2025-10-11 01:48:28,920 | INFO     | fitting pss+swap vs Time
[2025-10-10 21:49:14] 2025-10-11 01:48:28,920 | INFO     | sum of square deviations: 2406870949.0909014
[2025-10-10 21:49:14] 2025-10-11 01:48:28,922 | INFO     | sum of deviations: 10874957174.121222
[2025-10-10 21:49:14] 2025-10-11 01:48:28,923 | INFO     | mean x: 1760141249.121212
[2025-10-10 21:49:14] 2025-10-11 01:48:28,923 | INFO     | mean y: 2351903.8282828284
[2025-10-10 21:49:14] 2025-10-11 01:48:28,923 | INFO     | -- intersect: -7950488572.237679
[2025-10-10 21:49:14] 2025-10-11 01:48:28,923 | INFO     | intersect: -7950488572.237679
[2025-10-10 21:49:14] 2025-10-11 01:48:28,924 | INFO     | chi2: 1.65942779866794
[2025-10-10 21:49:14] 2025-10-11 01:48:28,924 | INFO     | sum of square deviations: 2229128384.6114078
[2025-10-10 21:49:14] 2025-10-11 01:48:28,927 | INFO     | sum of deviations: 10202471240.75649
[2025-10-10 21:49:14] 2025-10-11 01:48:28,927 | INFO     | mean x: 1760141096.6373057
[2025-10-10 21:49:14] 2025-10-11 01:48:28,927 | INFO     | mean y: 2351326.839378238
[2025-10-10 21:49:14] 2025-10-11 01:48:28,927 | INFO     | -- intersect: -8053617563.102414
[2025-10-10 21:49:14] 2025-10-11 01:48:28,927 | INFO     | intersect: -8053617563.102414
[2025-10-10 21:49:14] 2025-10-11 01:48:28,927 | INFO     | chi2: 1.6596598741117898
[2025-10-10 21:49:14] 2025-10-11 01:48:28,928 | INFO     | current chi2=1.6596598741117898 (change=-0.013985269141335115 %)
[2025-10-10 21:49:14] 2025-10-11 01:48:28,928 | INFO     | right removable region: 192
[2025-10-10 21:49:14] 2025-10-11 01:48:28,928 | INFO     | sum of square deviations: 2229053354.6114078
[2025-10-10 21:49:14] 2025-10-11 01:48:28,929 | INFO     | sum of deviations: -19083280798.181347
[2025-10-10 21:49:14] 2025-10-11 01:48:28,929 | INFO     | mean x: 1760141401.6373057
[2025-10-10 21:49:14] 2025-10-11 01:48:28,929 | INFO     | mean y: 2377337.4974093265
[2025-10-10 21:49:14] 2025-10-11 01:48:28,929 | INFO     | -- intersect: 15071228220.972488
[2025-10-10 21:49:14] 2025-10-11 01:48:28,930 | INFO     | intersect: 15071228220.972488
[2025-10-10 21:49:14] 2025-10-11 01:48:28,930 | INFO     | chi2: 0.1676151560282599
[2025-10-10 21:49:14] 2025-10-11 01:48:28,930 | INFO     | current chi2=0.1676151560282599 (change=89.89921970917877 %)
[2025-10-10 21:49:14] 2025-10-11 01:48:28,930 | INFO     | sum of square deviations: 2060224201.8297827
[2025-10-10 21:49:14] 2025-10-11 01:48:28,931 | INFO     | sum of deviations: -24879172637.680866
[2025-10-10 21:49:14] 2025-10-11 01:48:28,932 | INFO     | mean x: 1760141554.1489363
[2025-10-10 21:49:14] 2025-10-11 01:48:28,932 | INFO     | mean y: 2382547.845744681
[2025-10-10 21:49:14] 2025-10-11 01:48:28,932 | INFO     | -- intersect: 21257770943.69827
[2025-10-10 21:49:14] 2025-10-11 01:48:28,932 | INFO     | intersect: 21257770943.69827
[2025-10-10 21:49:14] 2025-10-11 01:48:28,932 | INFO     | chi2: 0.10300810319817828
[2025-10-10 21:49:14] 2025-10-11 01:48:28,932 | INFO     | current chi2=0.10300810319817828 (change=38.544875273205534 %)
[2025-10-10 21:49:14] 2025-10-11 01:48:28,933 | INFO     | sum of square deviations: 1900151111.3114793
[2025-10-10 21:49:14] 2025-10-11 01:48:28,934 | INFO     | sum of deviations: -22380097167.639347
[2025-10-10 21:49:14] 2025-10-11 01:48:28,934 | INFO     | mean x: 1760141706.6557376
[2025-10-10 21:49:14] 2025-10-11 01:48:28,934 | INFO     | mean y: 2380157.8469945355
[2025-10-10 21:49:14] 2025-10-11 01:48:28,934 | INFO     | -- intersect: 20733437908.607464
[2025-10-10 21:49:14] 2025-10-11 01:48:28,934 | INFO     | intersect: 20733437908.607464
[2025-10-10 21:49:14] 2025-10-11 01:48:28,934 | INFO     | chi2: 0.10226090667714506
[2025-10-10 21:49:14] 2025-10-11 01:48:28,934 | INFO     | current chi2=0.10226090667714506 (change=0.7253764488757584 %)
[2025-10-10 21:49:14] 2025-10-11 01:48:28,934 | INFO     | left removable region: 30
[2025-10-10 21:49:14] 2025-10-11 01:48:28,935 | INFO     | sum of square deviations: 1318164285.8086374
[2025-10-10 21:49:14] 2025-10-11 01:48:28,936 | INFO     | sum of deviations: -11203866095.043203
[2025-10-10 21:49:14] 2025-10-11 01:48:28,936 | INFO     | mean x: 1760141981.1790123
[2025-10-10 21:49:14] 2025-10-11 01:48:28,936 | INFO     | mean y: 2367922.1049382715
[2025-10-10 21:49:14] 2025-10-11 01:48:28,936 | INFO     | -- intersect: 14962866607.817766
[2025-10-10 21:49:14] 2025-10-11 01:48:28,936 | INFO     | intersect: 14962866607.817766
[2025-10-10 21:49:14] 2025-10-11 01:48:28,936 | INFO     | chi2: 0.08008260543350586
[2025-10-10 21:49:14] 2025-10-11 01:48:28,936 | INFO     | -- intersect: 14962866607.817766
[2025-10-10 21:49:14] 2025-10-11 01:48:28,937 | INFO     | current memory leak: -8.50 B/s (using 162 data points, chi2=0.08)
[2025-10-10 21:49:14] 2025-10-11 01:48:28,937 | INFO     | could have reported an average CPU frequency of 2545 MHz (10 samples)
[2025-10-10 21:49:14] 2025-10-11 01:48:28,937 | INFO     | ..............................
[2025-10-10 21:49:14] 2025-10-11 01:48:28,937 | INFO     | . Timing measurements:
[2025-10-10 21:49:14] 2025-10-11 01:48:28,937 | INFO     | . get job = 0 s
[2025-10-10 21:49:14] 2025-10-11 01:48:28,937 | INFO     | . initial setup = 4 s
[2025-10-10 21:49:14] 2025-10-11 01:48:28,938 | INFO     | . payload setup = 9 s
[2025-10-10 21:49:14] 2025-10-11 01:48:28,938 | INFO     | . stage-in = 0 s
[2025-10-10 21:49:14] 2025-10-11 01:48:28,938 | INFO     | . payload execution = 12059 s
[2025-10-10 21:49:14] 2025-10-11 01:48:28,938 | INFO     | . stage-out = 2 s
[2025-10-10 21:49:14] 2025-10-11 01:48:28,938 | INFO     | . log creation = 0 s
[2025-10-10 21:49:14] 2025-10-11 01:48:28,938 | INFO     | ..............................
[2025-10-10 21:49:14] 2025-10-11 01:48:29,048 | INFO     | 
[2025-10-10 21:49:14] 2025-10-11 01:48:29,048 | INFO     | job summary report
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | --------------------------------------------------
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | PanDA job id: 6837630662
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | task id: 46676269
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | errors: (none)
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | pilot state: finished 
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | transexitcode: 0
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | exeerrorcode: 0
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | exeerrordiag: 
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | exitcode: 0
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | exitmsg: OK
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | cpuconsumptiontime: 48749 s
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | nevents: 400
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | neventsw: 0
[2025-10-10 21:49:14] 2025-10-11 01:48:29,049 | INFO     | pid: 492595
[2025-10-10 21:49:14] 2025-10-11 01:48:29,050 | INFO     | pgrp: 492595
[2025-10-10 21:49:14] 2025-10-11 01:48:29,050 | INFO     | corecount: 8
[2025-10-10 21:49:14] 2025-10-11 01:48:29,050 | INFO     | event service: False
[2025-10-10 21:49:14] 2025-10-11 01:48:29,050 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 11: 2349175, 12072: 2378520, 12073: 2378519, 12076: 2387757, 12085: 2387895}
[2025-10-10 21:49:14] 2025-10-11 01:48:29,050 | INFO     | --------------------------------------------------
[2025-10-10 21:49:14] 2025-10-11 01:48:29,050 | INFO     | 
[2025-10-10 21:49:14] 2025-10-11 01:48:29,050 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 21:49:14] 2025-10-11 01:48:29,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,081 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,081 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,082 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 21:49:14] 2025-10-11 01:48:29,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 21:49:14] 2025-10-11 01:48:29,083 | INFO     | job 6837630662 has completed (purged errors)
[2025-10-10 21:49:14] 2025-10-11 01:48:29,083 | INFO     | overall cleanup function is called
[2025-10-10 21:49:14] 2025-10-11 01:48:30,092 | INFO     | --- collectZombieJob: --- 10, [492595]
[2025-10-10 21:49:14] 2025-10-11 01:48:30,092 | INFO     | zombie collector waiting for pid 492595
[2025-10-10 21:49:14] 2025-10-11 01:48:30,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 21:49:14] 2025-10-11 01:48:30,092 | INFO     | collected zombie processes
[2025-10-10 21:49:14] 2025-10-11 01:48:30,092 | INFO     | will attempt to kill all subprocesses of pid=492595
[2025-10-10 21:49:14] 2025-10-11 01:48:30,549 | INFO     | process IDs to be killed: [492595] (in reverse order)
[2025-10-10 21:49:14] 2025-10-11 01:48:30,703 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 21:49:14] 2025-10-11 01:48:30,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 21:49:14] 2025-10-11 01:48:30,724 | INFO     | did not find any defunct processes belonging to 492595
[2025-10-10 21:49:14] 2025-10-11 01:48:30,743 | INFO     | did not find any defunct processes belonging to 492595
[2025-10-10 21:49:14] 2025-10-11 01:48:30,744 | INFO     | ready for new job
[2025-10-10 21:49:14] 2025-10-11 01:48:30,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 21:49:14] 2025-10-11 01:48:30,746 | INFO     | ***************************************
[2025-10-10 21:49:14] 2025-10-11 01:48:30,746 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 21:49:14] 2025-10-11 01:48:30,746 | INFO     | ***************************************
[2025-10-10 21:49:14] 2025-10-11 01:48:30,746 | INFO     | 
[2025-10-10 21:49:14] 2025-10-11 01:48:30,752 | INFO     | architecture information:
[2025-10-10 21:49:14] 2025-10-11 01:48:30,753 | INFO     | executing command: cat /etc/os-release
[2025-10-10 21:49:14] 2025-10-11 01:48:30,773 | INFO     | cat /etc/os-release:
[2025-10-10 21:49:14] NAME="CentOS Linux"
[2025-10-10 21:49:14] VERSION="7 (Core)"
[2025-10-10 21:49:14] ID="centos"
[2025-10-10 21:49:14] ID_LIKE="rhel fedora"
[2025-10-10 21:49:14] VERSION_ID="7"
[2025-10-10 21:49:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 21:49:14] ANSI_COLOR="0;31"
[2025-10-10 21:49:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 21:49:14] HOME_URL="https://www.centos.org/"
[2025-10-10 21:49:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 21:49:14] 
[2025-10-10 21:49:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 21:49:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 21:49:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 21:49:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 21:49:14] 
[2025-10-10 21:49:14] 2025-10-11 01:48:30,773 | INFO     | ***************************************
[2025-10-10 21:49:14] 2025-10-11 01:48:31,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 21:49:14] 2025-10-11 01:48:31,302 | INFO     | sufficient remaining disk space (73214722048 B)
[2025-10-10 21:49:14] 2025-10-11 01:48:31,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 21:49:14] 2025-10-11 01:48:31,302 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 21:49:14] 2025-10-11 01:48:31,302 | INFO     | update_server=False
[2025-10-10 21:49:14] 2025-10-11 01:48:31,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 21:49:14] 2025-10-11 01:48:31,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:49:14] 2025-10-11 01:48:31,303 | INFO     | aborting loop
[2025-10-10 21:49:14] 2025-10-11 01:48:31,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 21:49:14] 2025-10-11 01:48:31,875 | INFO     | all job control threads have been joined
[2025-10-10 21:49:14] 2025-10-11 01:48:32,307 | INFO     | [job] retrieve thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:32,308 | INFO     | [job] job monitor thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:32,354 | INFO     | all payload control threads have been joined
[2025-10-10 21:49:14] 2025-10-11 01:48:32,367 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:32,391 | INFO     | all data control threads have been joined
[2025-10-10 21:49:14] 2025-10-11 01:48:32,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 21:49:14] 2025-10-11 01:48:32,881 | INFO     | [job] control thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:32,938 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:32,999 | INFO     | [data] copytool_in thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:33,068 | INFO     | [payload] failed_post thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:33,115 | INFO     | [job] validate thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:33,152 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:33,167 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:33,359 | INFO     | [payload] control thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:33,397 | INFO     | [data] control thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:33,560 | INFO     | [payload] validate_post thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:34,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:49:14] 2025-10-11 01:48:34,462 | INFO     | [data] copytool_out thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:35,068 | INFO     | [job] queue monitor thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:48:35,312 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 21:49:14] 2025-10-11 01:49:01,572 | INFO     | PID=479019 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 21:49:14] 2025-10-11 01:49:01,574 | INFO     | .. there are 32 such processes running
[2025-10-10 21:49:14] 2025-10-11 01:49:01,575 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 21:49:14] 2025-10-11 01:49:01,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 21:49:14] 2025-10-11 01:49:01,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 21:49:14] 2025-10-11 01:49:06,775 | INFO     | [monitor] cgroup control has ended
[2025-10-10 21:49:14] 2025-10-11 01:49:08,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950002403136)>', '<ExcThread(monitor, started 139949269567232)>']
[2025-10-10 21:49:14] 2025-10-11 01:49:08,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 21:49:14] 2025-10-11 01:49:08,613 | INFO     | [monitor] control thread has ended
[2025-10-10 21:49:14] 2025-10-11 01:49:13,574 | INFO     | all workflow threads have been joined
[2025-10-10 21:49:14] 2025-10-11 01:49:13,574 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 21:49:14] 2025-10-11 01:49:13,575 | INFO     | traces error code: 0
[2025-10-10 21:49:14] 2025-10-11 01:49:13,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 21:49:14] 2025-10-11 01:49:13,789 [wrapper] ==== pilot stdout END ====
[2025-10-10 21:49:14] 2025-10-11 01:49:13,792 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 21:49:14] 2025-10-11 01:49:13,795 [wrapper] pilotpid: 479019
[2025-10-10 21:49:14] 2025-10-11 01:49:13,798 [wrapper] Pilot exit status: 0
[2025-10-10 21:49:14] 2025-10-11 01:49:13,818 [wrapper] pandaids: 6837630662
[2025-10-10 21:49:14] 2025-10-11 01:49:13,906 [wrapper] cleanup supervisor_pilot 1138673 479020
[2025-10-10 21:49:14] 2025-10-11 01:49:13,909 [wrapper] Test setup, not cleaning
[2025-10-10 21:49:14] 2025-10-11 01:49:13,912 [wrapper] apfmon messages muted
[2025-10-10 21:49:14] 2025-10-11 01:49:13,916 [wrapper] ==== wrapper stdout END ====
[2025-10-10 21:49:14] 2025-10-11 01:49:13,920 [wrapper] ==== wrapper stderr END ====
[2025-10-10 21:49:14]  *** Error codes and diagnostics ***
[2025-10-10 21:49:14]     "exeErrorCode": 0,
[2025-10-10 21:49:14]     "exeErrorDiag": "",
[2025-10-10 21:49:14]     "pilotErrorCode": 0,
[2025-10-10 21:49:14]     "pilotErrorDiag": "",
[2025-10-10 21:49:14]  *** Listing of results directory ***
[2025-10-10 21:49:14] total 416836
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 09:26 pilot3.tar.gz
[2025-10-10 21:49:14] -rwx------. 1 boincer umatlas     36292 Oct 10 09:32 runpilot2-wrapper.sh
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 09:32 queuedata.json
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas       100 Oct 10 18:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 21:49:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 18:26 run_atlas
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas       105 Oct 10 18:26 job.xml
[2025-10-10 21:49:14] -rw-r--r--. 2 boincer umatlas 219807265 Oct 10 18:26 EVNT.46676267._001594.pool.root.1
[2025-10-10 21:49:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:26 start_atlas.sh
[2025-10-10 21:49:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 18:26 shared
[2025-10-10 21:49:14] -rw-r--r--. 2 boincer umatlas    569674 Oct 10 18:26 input.tar.gz
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas         0 Oct 10 18:26 boinc_lockfile
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 18:26 pandaJob.out
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas    975517 Oct 10 18:26 agis_schedconf.cvmfs.json
[2025-10-10 21:49:14] drwx------. 5 boincer umatlas      4096 Oct 10 18:26 pilot3
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas 199238577 Oct 10 21:47 HITS.46676269._039282.pool.root.1
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas       530 Oct 10 21:47 boinc_task_state.xml
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas      6858 Oct 10 21:48 init_data.xml
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas      1044 Oct 10 21:48 memory_monitor_summary.json
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas   1560580 Oct 10 21:48 agis_ddmendpoints.agis.ALL.json
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas    425928 Oct 10 21:48 log.46676269._039282.job.log.tgz.1
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas      7834 Oct 10 21:48 heartbeat.json
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas        95 Oct 10 21:49 pilot_heartbeat.json
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 21:49 boinc_mmap_file
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas        28 Oct 10 21:49 wrapper_checkpoint.txt
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas      4823 Oct 10 21:49 pilotlog.txt
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas   1517676 Oct 10 21:49 log.46676269._039282.job.log.1
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas       357 Oct 10 21:49 output.list
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas       620 Oct 10 21:49 runtime_log
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas   1966080 Oct 10 21:49 result.tar.gz
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas      8709 Oct 10 21:49 runtime_log.err
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas       656 Oct 10 21:49 fKBMDm3PSR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvSdNDmQxJS8n.diag
[2025-10-10 21:49:14] -rw-r--r--. 1 boincer umatlas     20993 Oct 10 21:49 stderr.txt
[2025-10-10 21:49:14] HITS file was successfully produced:
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas 199238577 Oct 10 21:47 shared/HITS.pool.root.1
[2025-10-10 21:49:14]  *** Contents of shared directory: ***
[2025-10-10 21:49:14] total 411732
[2025-10-10 21:49:14] -rw-r--r--. 2 boincer umatlas 219807265 Oct 10 18:26 ATLAS.root_0
[2025-10-10 21:49:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:26 start_atlas.sh
[2025-10-10 21:49:14] -rw-r--r--. 2 boincer umatlas    569674 Oct 10 18:26 input.tar.gz
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas 199238577 Oct 10 21:47 HITS.pool.root.1
[2025-10-10 21:49:14] -rw-------. 1 boincer umatlas   1966080 Oct 10 21:49 result.tar.gz
21:49:15 (475084): run_atlas exited; CPU time 49273.621339
21:49:15 (475084): called boinc_finish(0)

</stderr_txt>
]]>

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