Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:46:32 (3867060): wrapper (7.7.26015): starting
14:46:32 (3867060): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 14:46:32] Arguments: --nthreads 4
[2025-10-11 14:46:32] Threads: 4
[2025-10-11 14:46:32] Checking for CVMFS
[2025-10-11 14:46:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:46:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:46:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:46:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:46:32] 2.9.2.0 2853088 2907 95844 151584 3 57 28488580 36864001 0 130560 0 2619382 99.992 97434 1023 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 14:46:32] CVMFS is ok
[2025-10-11 14:46:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:46:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:46:33] Further information can be found at the LHC@home message board.
[2025-10-11 14:46:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:46:33] Checking for apptainer binary...
[2025-10-11 14:46:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:46:33] Running /usr/bin/apptainer --version
[2025-10-11 14:46:33] apptainer version 1.4.1-1.1
[2025-10-11 14:46:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:46:33] atlasA139a
[2025-10-11 14:46:33] apptainer works
[2025-10-11 14:46:33] Set ATHENA_PROC_NUMBER=4
[2025-10-11 14:46:33] Set ATHENA_CORE_NUMBER=4
[2025-10-11 14:46:33] Starting ATLAS job with PandaID=6837630309
[2025-10-11 14:46:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:57:01]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:57:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 15:57:01]  replicas=None
[2025-10-11 15:57:01]  scope=mc23_13p6TeV
[2025-10-11 15:57:01]  status=None
[2025-10-11 15:57:01]  status_code=0
[2025-10-11 15:57:01]  storage_token=
[2025-10-11 15:57:01]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6837630309/log.46676269._038949.job.log.tgz.1
[2025-10-11 15:57:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/47/log.46676269._038949.job.log.tgz.1
[2025-10-11 15:57:01]  workdir=None
[2025-10-11 15:57:01] ]
[2025-10-11 15:57:01] 2025-10-11 13:56:22,468 | INFO     | transferring file log.46676269._038949.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6837630309/log.46676269._038949.job.log.tgz.1 to /local/data/boinc/
[2025-10-11 15:57:01] 2025-10-11 13:56:22,468 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6837630309/log.46676269._038949.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0389
[2025-10-11 15:57:01] 2025-10-11 13:56:22,489 | INFO     | adding to output.list: log.46676269._038949.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/47/log.46676269._038949.job.log.tg
[2025-10-11 15:57:01] 2025-10-11 13:56:22,489 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 15:57:01] 2025-10-11 13:56:22,490 | INFO     | summary of transferred files:
[2025-10-11 15:57:01] 2025-10-11 13:56:22,490 | INFO     |  -- lfn=log.46676269._038949.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 15:57:01] 2025-10-11 13:56:22,490 | INFO     | stage-out finished correctly
[2025-10-11 15:57:01] 2025-10-11 13:56:22,530 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 15:57:01] 2025-10-11 13:56:22,593 | INFO     | number of running child processes to parent process 3877418: 1
[2025-10-11 15:57:01] 2025-10-11 13:56:22,593 | INFO     | maximum number of monitored processes: 6
[2025-10-11 15:57:01] 2025-10-11 13:56:24,425 | INFO     | time since job start (4183s) is within the limit (172800.0s)
[2025-10-11 15:57:01] 2025-10-11 13:56:25,097 | INFO     | monitor loop #322: job 0:6837630309 is in state 'finished'
[2025-10-11 15:57:01] 2025-10-11 13:56:25,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:57:01] 2025-10-11 13:56:25,383 | INFO     | job 6837630309 has state=finished
[2025-10-11 15:57:01] 2025-10-11 13:56:25,384 | INFO     | preparing for final server update for job 6837630309 in state='finished'
[2025-10-11 15:57:01] 2025-10-11 13:56:25,384 | INFO     | this job has now completed (state=finished)
[2025-10-11 15:57:01] 2025-10-11 13:56:25,384 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 15:57:01] 2025-10-11 13:56:25,384 | INFO     | log transfer has been attempted: DONE
[2025-10-11 15:57:01] 2025-10-11 13:56:25,384 | INFO     | job 6837630309 has finished - writing final server update
[2025-10-11 15:57:01] 2025-10-11 13:56:25,384 | INFO     | total number of processed events: 400 (read)
[2025-10-11 15:57:01] 2025-10-11 13:56:25,385 | INFO     | executing command: lscpu
[2025-10-11 15:57:01] 2025-10-11 13:56:25,407 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 15:57:01] 2025-10-11 13:56:26,431 | INFO     | time since job start (4185s) is within the limit (172800.0s)
[2025-10-11 15:57:01] 2025-10-11 13:56:27,600 | INFO     | monitor loop #323: job 0:6837630309 is in state 'finished'
[2025-10-11 15:57:01] 2025-10-11 13:56:27,601 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:57:01] 2025-10-11 13:56:28,436 | INFO     | time since job start (4187s) is within the limit (172800.0s)
[2025-10-11 15:57:01] 2025-10-11 13:56:28,951 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 15:57:01] 2025-10-11 13:56:28,953 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3270.7470624999996
[2025-10-11 15:57:01] 2025-10-11 13:56:28,954 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837630309/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 15:57:01] 2025-10-11 13:56:28,955 | INFO     | extracted standard info from prmon json
[2025-10-11 15:57:01] 2025-10-11 13:56:28,955 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 15:57:01] 2025-10-11 13:56:28,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 15:57:01] 2025-10-11 13:56:28,955 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 15:57:01] 2025-10-11 13:56:28,955 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | sum of square deviations: 73882315.5
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | sum of deviations: -7355607194.499999
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | mean x: 1760188990.5
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | mean y: 2490258.5967741935
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | -- intersect: 175244139286.25198
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | intersect: 175244139286.25198
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | chi2: 0.06635586817468912
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | -- intersect: 175244139286.25198
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | current memory leak: -99.56 B/s (using 62 data points, chi2=0.07)
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | could have reported an average CPU frequency of 3471 MHz (6 samples)
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | ..............................
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | . Timing measurements:
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | . get job = 0 s
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | . initial setup = 1 s
[2025-10-11 15:57:01] 2025-10-11 13:56:28,956 | INFO     | . payload setup = 4 s
[2025-10-11 15:57:01] 2025-10-11 13:56:28,957 | INFO     | . stage-in = 0 s
[2025-10-11 15:57:01] 2025-10-11 13:56:28,957 | INFO     | . payload execution = 4157 s
[2025-10-11 15:57:01] 2025-10-11 13:56:28,957 | INFO     | . stage-out = 0 s
[2025-10-11 15:57:01] 2025-10-11 13:56:28,957 | INFO     | . log creation = 0 s
[2025-10-11 15:57:01] 2025-10-11 13:56:28,957 | INFO     | ..............................
[2025-10-11 15:57:01] 2025-10-11 13:56:28,997 | INFO     | 
[2025-10-11 15:57:01] 2025-10-11 13:56:28,997 | INFO     | job summary report
[2025-10-11 15:57:01] 2025-10-11 13:56:28,997 | INFO     | --------------------------------------------------
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | PanDA job id: 6837630309
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | task id: 46676269
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | errors: (none)
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | pilot state: finished 
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | transexitcode: 0
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | exeerrorcode: 0
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | exeerrordiag: 
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | exitcode: 0
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | exitmsg: OK
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | cpuconsumptiontime: 15790 s
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | nevents: 400
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | neventsw: 0
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | pid: 3877418
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | pgrp: 3877418
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | corecount: 4
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | event service: False
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | sizes: {0: 2348860, 3: 2349122, 11: 2349150, 4165: 2375190, 4167: 2384250, 4173: 2384388}
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | --------------------------------------------------
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | 
[2025-10-11 15:57:01] 2025-10-11 13:56:28,998 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-11 15:57:01] 2025-10-11 13:56:29,016 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:57:01] 2025-10-11 13:56:29,018 | INFO     | job 6837630309 has completed (purged errors)
[2025-10-11 15:57:01] 2025-10-11 13:56:29,018 | INFO     | overall cleanup function is called
[2025-10-11 15:57:01] 2025-10-11 13:56:30,024 | INFO     | --- collectZombieJob: --- 10, [3877418]
[2025-10-11 15:57:01] 2025-10-11 13:56:30,025 | INFO     | zombie collector waiting for pid 3877418
[2025-10-11 15:57:01] 2025-10-11 13:56:30,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:57:01] 2025-10-11 13:56:30,025 | INFO     | collected zombie processes
[2025-10-11 15:57:01] 2025-10-11 13:56:30,025 | INFO     | will attempt to kill all subprocesses of pid=3877418
[2025-10-11 15:57:01] 2025-10-11 13:56:30,070 | INFO     | process IDs to be killed: [3877418] (in reverse order)
[2025-10-11 15:57:01] 2025-10-11 13:56:30,106 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:57:01] 2025-10-11 13:56:30,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:57:01] 2025-10-11 13:56:30,108 | INFO     | did not find any defunct processes belonging to 3877418
[2025-10-11 15:57:01] 2025-10-11 13:56:30,109 | INFO     | did not find any defunct processes belonging to 3877418
[2025-10-11 15:57:01] 2025-10-11 13:56:30,109 | INFO     | ready for new job
[2025-10-11 15:57:01] 2025-10-11 13:56:30,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:57:01] 2025-10-11 13:56:30,110 | INFO     | ***************************************
[2025-10-11 15:57:01] 2025-10-11 13:56:30,110 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:57:01] 2025-10-11 13:56:30,110 | INFO     | ***************************************
[2025-10-11 15:57:01] 2025-10-11 13:56:30,110 | INFO     | 
[2025-10-11 15:57:01] 2025-10-11 13:56:30,110 | INFO     | architecture information:
[2025-10-11 15:57:01] 2025-10-11 13:56:30,111 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:57:01] 2025-10-11 13:56:30,126 | INFO     | cat /etc/os-release:
[2025-10-11 15:57:01] NAME="CentOS Linux"
[2025-10-11 15:57:01] VERSION="7 (Core)"
[2025-10-11 15:57:01] ID="centos"
[2025-10-11 15:57:01] ID_LIKE="rhel fedora"
[2025-10-11 15:57:01] VERSION_ID="7"
[2025-10-11 15:57:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:57:01] ANSI_COLOR="0;31"
[2025-10-11 15:57:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:57:01] HOME_URL="https://www.centos.org/"
[2025-10-11 15:57:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:57:01] 
[2025-10-11 15:57:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:57:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:57:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:57:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:57:01] 
[2025-10-11 15:57:01] 2025-10-11 13:56:30,126 | INFO     | ***************************************
[2025-10-11 15:57:01] 2025-10-11 13:56:30,629 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-11 15:57:01] 2025-10-11 13:56:30,648 | INFO     | sufficient remaining disk space (330256351232 B)
[2025-10-11 15:57:01] 2025-10-11 13:56:30,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:57:01] 2025-10-11 13:56:30,648 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:57:01] 2025-10-11 13:56:30,648 | INFO     | update_server=False
[2025-10-11 15:57:01] 2025-10-11 13:56:30,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:57:01] 2025-10-11 13:56:30,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:57:01] 2025-10-11 13:56:30,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:57:01] 2025-10-11 13:56:30,960 | INFO     | all job control threads have been joined
[2025-10-11 15:57:01] 2025-10-11 13:56:31,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:57:01] 2025-10-11 13:56:31,110 | INFO     | aborting loop
[2025-10-11 15:57:01] 2025-10-11 13:56:31,120 | INFO     | all payload control threads have been joined
[2025-10-11 15:57:01] 2025-10-11 13:56:31,121 | INFO     | all data control threads have been joined
[2025-10-11 15:57:01] 2025-10-11 13:56:31,653 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:31,654 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:31,787 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:31,966 | INFO     | [job] control thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:32,047 | INFO     | [job] validate thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:32,115 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:32,126 | INFO     | [payload] control thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:32,127 | INFO     | [data] control thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:32,182 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:32,206 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:32,305 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:32,654 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:32,813 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:32,834 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:33,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:57:01] 2025-10-11 13:56:33,126 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:37,087 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:57:01] 2025-10-11 13:56:45,728 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:57:01] 2025-10-11 13:56:46,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196265232192)>', '<ExcThread(monitor, started 140195164837632)>']
[2025-10-11 15:57:01] 2025-10-11 13:56:51,265 | INFO     | all workflow threads have been joined
[2025-10-11 15:57:01] 2025-10-11 13:56:51,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:57:01] 2025-10-11 13:56:51,267 | INFO     | traces error code: 0
[2025-10-11 15:57:01] 2025-10-11 13:56:51,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:57:01] 2025-10-11 13:57:01,572 | INFO     | PID=3870856 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:57:01] 2025-10-11 13:57:01,573 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:57:01] 2025-10-11 13:57:01,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:57:01] 2025-10-11 13:57:01,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:57:01] 2025-10-11 13:57:01,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:57:01] 2025-10-11 13:57:01,573 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 15:57:01] 2025-10-11 13:57:01,573 | INFO     | [monitor] control thread has ended
[2025-10-11 15:57:01] 2025-10-11 13:57:01,651 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:57:01] 2025-10-11 13:57:01,656 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:57:01] 2025-10-11 13:57:01,660 [wrapper] pilotpid: 3870856
[2025-10-11 15:57:01] 2025-10-11 13:57:01,664 [wrapper] Pilot exit status: 0
[2025-10-11 15:57:01] 2025-10-11 13:57:01,676 [wrapper] pandaids: 6837630309
[2025-10-11 15:57:01] 2025-10-11 13:57:01,700 [wrapper] cleanup supervisor_pilot 3887356 3870857
[2025-10-11 15:57:01] 2025-10-11 13:57:01,704 [wrapper] Test setup, not cleaning
[2025-10-11 15:57:01] 2025-10-11 13:57:01,708 [wrapper] apfmon messages muted
[2025-10-11 15:57:01] 2025-10-11 13:57:01,712 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:57:01] 2025-10-11 13:57:01,716 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:57:01]  *** Error codes and diagnostics ***
[2025-10-11 15:57:01]     "exeErrorCode": 0,
[2025-10-11 15:57:01]     "exeErrorDiag": "",
[2025-10-11 15:57:01]     "pilotErrorCode": 0,
[2025-10-11 15:57:01]     "pilotErrorDiag": "",
[2025-10-11 15:57:01]  *** Listing of results directory ***
[2025-10-11 15:57:01] total 408384
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc    557409 Oct 10 15:04 pilot3.tar.gz
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc      5112 Oct 10 15:09 queuedata.json
[2025-10-11 15:57:01] -rwx------ 1 boinc boinc     36292 Oct 10 15:10 runpilot2-wrapper.sh
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc       100 Oct 11 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:57:01] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 14:46 run_atlas
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc       105 Oct 11 14:46 job.xml
[2025-10-11 15:57:01] -rw-r--r-- 2 boinc boinc 220663547 Oct 11 14:46 EVNT.46676267._001581.pool.root.1
[2025-10-11 15:57:01] -rw-r--r-- 2 boinc boinc    569680 Oct 11 14:46 input.tar.gz
[2025-10-11 15:57:01] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:46 start_atlas.sh
[2025-10-11 15:57:01] drwxrwx--x 2 boinc boinc      4096 Oct 11 14:46 shared
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:46 boinc_setup_complete
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc      6382 Oct 11 14:46 init_data.xml
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:46 boinc_lockfile
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc      2550 Oct 11 14:46 pandaJob.out
[2025-10-11 15:57:01] -rw------- 1 boinc boinc    975504 Oct 11 14:46 agis_schedconf.cvmfs.json
[2025-10-11 15:57:01] -rw------- 1 boinc boinc   1560580 Oct 11 14:46 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:57:01] drwx------ 5 boinc boinc      4096 Oct 11 14:46 pilot3
[2025-10-11 15:57:01] -rw------- 1 boinc boinc 191873158 Oct 11 15:56 HITS.46676269._038949.pool.root.1
[2025-10-11 15:57:01] -rw------- 1 boinc boinc        95 Oct 11 15:56 pilot_heartbeat.json
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc       529 Oct 11 15:56 boinc_task_state.xml
[2025-10-11 15:57:01] -rw------- 1 boinc boinc      1022 Oct 11 15:56 memory_monitor_summary.json
[2025-10-11 15:57:01] -rw------- 1 boinc boinc    247709 Oct 11 15:56 log.46676269._038949.job.log.tgz.1
[2025-10-11 15:57:01] -rw------- 1 boinc boinc      7787 Oct 11 15:56 heartbeat.json
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc        27 Oct 11 15:56 wrapper_checkpoint.txt
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc      8192 Oct 11 15:56 boinc_mmap_file
[2025-10-11 15:57:01] -rw------- 1 boinc boinc       817 Oct 11 15:57 pilotlog.txt
[2025-10-11 15:57:01] -rw------- 1 boinc boinc    623474 Oct 11 15:57 log.46676269._038949.job.log.1
[2025-10-11 15:57:01] -rw------- 1 boinc boinc       357 Oct 11 15:57 output.list
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc       620 Oct 11 15:57 runtime_log
[2025-10-11 15:57:01] -rw------- 1 boinc boinc    890880 Oct 11 15:57 result.tar.gz
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc      8797 Oct 11 15:57 runtime_log.err
[2025-10-11 15:57:01] -rw------- 1 boinc boinc       662 Oct 11 15:57 1bGNDm03RR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6OdNDm1Rqatm.diag
[2025-10-11 15:57:01] -rw-r--r-- 1 boinc boinc     21813 Oct 11 15:57 stderr.txt
[2025-10-11 15:57:01] HITS file was successfully produced:
[2025-10-11 15:57:01] -rw------- 1 boinc boinc 191873158 Oct 11 15:56 shared/HITS.pool.root.1
[2025-10-11 15:57:01]  *** Contents of shared directory: ***
[2025-10-11 15:57:01] total 404328
[2025-10-11 15:57:01] -rw-r--r-- 2 boinc boinc 220663547 Oct 11 14:46 ATLAS.root_0
[2025-10-11 15:57:01] -rw-r--r-- 2 boinc boinc    569680 Oct 11 14:46 input.tar.gz
[2025-10-11 15:57:01] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:46 start_atlas.sh
[2025-10-11 15:57:01] -rw------- 1 boinc boinc 191873158 Oct 11 15:56 HITS.pool.root.1
[2025-10-11 15:57:01] -rw------- 1 boinc boinc    890880 Oct 11 15:57 result.tar.gz
15:57:03 (3867060): run_atlas exited; CPU time 15803.042676
15:57:03 (3867060): called boinc_finish(0)

</stderr_txt>
]]>

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