Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:28:47 (3404739): wrapper (7.7.26015): starting
09:28:47 (3404739): wrapper: running run_atlas (--nthreads 3)
[2025-10-11 09:28:47] Arguments: --nthreads 3
[2025-10-11 09:28:47] Threads: 3
[2025-10-11 09:28:47] Checking for CVMFS
[2025-10-11 09:28:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:28:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:28:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:28:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:28:47] 2.9.2.0 2646070 2668 68264 151576 2 56 28667904 36864000 0 130560 0 1985997 99.991 87939 1095 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 09:28:47] CVMFS is ok
[2025-10-11 09:28:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:28:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:28:47] Further information can be found at the LHC@home message board.
[2025-10-11 09:28:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:28:47] Checking for apptainer binary...
[2025-10-11 09:28:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 09:28:47] Running /usr/bin/apptainer --version
[2025-10-11 09:28:47] apptainer version 1.4.1-1.1
[2025-10-11 09:28:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:28:47] cosA133a
[2025-10-11 09:28:47] apptainer works
[2025-10-11 09:28:47] Set ATHENA_PROC_NUMBER=3
[2025-10-11 09:28:47] Set ATHENA_CORE_NUMBER=3
[2025-10-11 09:28:47] Starting ATLAS job with PandaID=6837669953
[2025-10-11 09:28:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 10:58:15]  *** The last 200 lines of the pilot log: ***
[2025-10-11 10:58:16]  workdir=None
[2025-10-11 10:58:16] ]
[2025-10-11 10:58:16] 2025-10-11 08:57:30,568 | INFO     | transferring file log.46676269._042058.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6837669953/log.46676269._042058.job.log.tgz.1 to /local/data/boinc/
[2025-10-11 10:58:16] 2025-10-11 08:57:30,568 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6837669953/log.46676269._042058.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0420
[2025-10-11 10:58:16] 2025-10-11 08:57:30,580 | INFO     | adding to output.list: log.46676269._042058.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/b2/log.46676269._042058.job.log.tg
[2025-10-11 10:58:16] 2025-10-11 08:57:30,580 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 10:58:16] 2025-10-11 08:57:30,580 | INFO     | summary of transferred files:
[2025-10-11 10:58:16] 2025-10-11 08:57:30,581 | INFO     |  -- lfn=log.46676269._042058.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 10:58:16] 2025-10-11 08:57:30,581 | INFO     | stage-out finished correctly
[2025-10-11 10:58:16] 2025-10-11 08:57:30,723 | INFO     | time since job start (5312s) is within the limit (172800.0s)
[2025-10-11 10:58:16] 2025-10-11 08:57:32,729 | INFO     | time since job start (5314s) is within the limit (172800.0s)
[2025-10-11 10:58:16] 2025-10-11 08:57:32,906 | INFO     | monitor loop #411: job 0:6837669953 is in state 'finished'
[2025-10-11 10:58:16] 2025-10-11 08:57:32,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:58:16] 2025-10-11 08:57:33,639 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 10:58:16] 2025-10-11 08:57:34,736 | INFO     | time since job start (5316s) is within the limit (172800.0s)
[2025-10-11 10:58:16] 2025-10-11 08:57:35,411 | INFO     | monitor loop #412: job 0:6837669953 is in state 'finished'
[2025-10-11 10:58:16] 2025-10-11 08:57:35,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:58:16] 2025-10-11 08:57:35,472 | INFO     | job 6837669953 has state=finished
[2025-10-11 10:58:16] 2025-10-11 08:57:35,472 | INFO     | preparing for final server update for job 6837669953 in state='finished'
[2025-10-11 10:58:16] 2025-10-11 08:57:35,472 | INFO     | this job has now completed (state=finished)
[2025-10-11 10:58:16] 2025-10-11 08:57:35,472 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 10:58:16] 2025-10-11 08:57:35,472 | INFO     | log transfer has been attempted: DONE
[2025-10-11 10:58:16] 2025-10-11 08:57:35,472 | INFO     | job 6837669953 has finished - writing final server update
[2025-10-11 10:58:16] 2025-10-11 08:57:35,472 | INFO     | total number of processed events: 400 (read)
[2025-10-11 10:58:16] 2025-10-11 08:57:35,473 | INFO     | executing command: lscpu
[2025-10-11 10:58:16] 2025-10-11 08:57:35,485 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 10:58:16] 2025-10-11 08:57:36,742 | INFO     | time since job start (5318s) is within the limit (172800.0s)
[2025-10-11 10:58:16] 2025-10-11 08:57:37,914 | INFO     | monitor loop #413: job 0:6837669953 is in state 'finished'
[2025-10-11 10:58:16] 2025-10-11 08:57:37,915 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:58:16] 2025-10-11 08:57:38,747 | INFO     | time since job start (5320s) is within the limit (172800.0s)
[2025-10-11 10:58:16] 2025-10-11 08:57:40,419 | INFO     | monitor loop #414: job 0:6837669953 is in state 'finished'
[2025-10-11 10:58:16] 2025-10-11 08:57:40,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:58:16] 2025-10-11 08:57:40,753 | INFO     | time since job start (5322s) is within the limit (172800.0s)
[2025-10-11 10:58:16] 2025-10-11 08:57:42,761 | INFO     | time since job start (5324s) is within the limit (172800.0s)
[2025-10-11 10:58:16] 2025-10-11 08:57:42,922 | INFO     | monitor loop #415: job 0:6837669953 is in state 'finished'
[2025-10-11 10:58:16] 2025-10-11 08:57:42,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:58:16] 2025-10-11 08:57:43,972 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 10:58:16] 2025-10-11 08:57:43,973 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4388.187333333333
[2025-10-11 10:58:16] 2025-10-11 08:57:43,974 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6837669953/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 10:58:16] 2025-10-11 08:57:43,974 | INFO     | extracted standard info from prmon json
[2025-10-11 10:58:16] 2025-10-11 08:57:43,974 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 10:58:16] 2025-10-11 08:57:43,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 10:58:16] 2025-10-11 08:57:43,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:58:16] 2025-10-11 08:57:43,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:58:16] 2025-10-11 08:57:43,975 | INFO     | fitting pss+swap vs Time
[2025-10-11 10:58:16] 2025-10-11 08:57:43,975 | INFO     | sum of square deviations: 158737860.0
[2025-10-11 10:58:16] 2025-10-11 08:57:43,975 | INFO     | sum of deviations: -14108006891.5
[2025-10-11 10:58:16] 2025-10-11 08:57:43,975 | INFO     | mean x: 1760170477.5
[2025-10-11 10:58:16] 2025-10-11 08:57:43,975 | INFO     | mean y: 2507557.2625
[2025-10-11 10:58:16] 2025-10-11 08:57:43,975 | INFO     | -- intersect: 156439650068.72665
[2025-10-11 10:58:16] 2025-10-11 08:57:43,975 | INFO     | intersect: 156439650068.72665
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | chi2: 0.08245783735614053
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | -- intersect: 156439650068.72665
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | current memory leak: -88.88 B/s (using 80 data points, chi2=0.08)
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | could have reported an average CPU frequency of 4329 MHz (6 samples)
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | ..............................
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | . Timing measurements:
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | . get job = 0 s
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | . initial setup = 1 s
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | . payload setup = 5 s
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | . stage-in = 0 s
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | . payload execution = 5287 s
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | . stage-out = 0 s
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | . log creation = 0 s
[2025-10-11 10:58:16] 2025-10-11 08:57:43,976 | INFO     | ..............................
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | 
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | job summary report
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | --------------------------------------------------
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | PanDA job id: 6837669953
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | task id: 46676269
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | errors: (none)
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | pilot state: finished 
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | transexitcode: 0
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | exeerrorcode: 0
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | exeerrordiag: 
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | exitcode: 0
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | exitmsg: OK
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | cpuconsumptiontime: 15224 s
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | nevents: 400
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | neventsw: 0
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | pid: 3414919
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | pgrp: 3414919
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | corecount: 3
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | event service: False
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | sizes: {0: 2348859, 5: 2349121, 11: 2349177, 5296: 2384777, 5299: 2384777, 5310: 2384971}
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | --------------------------------------------------
[2025-10-11 10:58:16] 2025-10-11 08:57:44,007 | INFO     | 
[2025-10-11 10:58:16] 2025-10-11 08:57:44,008 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-11 10:58:16] 2025-10-11 08:57:44,019 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | job 6837669953 has completed (purged errors)
[2025-10-11 10:58:16] 2025-10-11 08:57:44,020 | INFO     | overall cleanup function is called
[2025-10-11 10:58:16] 2025-10-11 08:57:45,027 | INFO     | --- collectZombieJob: --- 10, [3414919]
[2025-10-11 10:58:16] 2025-10-11 08:57:45,027 | INFO     | zombie collector waiting for pid 3414919
[2025-10-11 10:58:16] 2025-10-11 08:57:45,027 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 10:58:16] 2025-10-11 08:57:45,028 | INFO     | collected zombie processes
[2025-10-11 10:58:16] 2025-10-11 08:57:45,028 | INFO     | will attempt to kill all subprocesses of pid=3414919
[2025-10-11 10:58:16] 2025-10-11 08:57:45,067 | INFO     | process IDs to be killed: [3414919] (in reverse order)
[2025-10-11 10:58:16] 2025-10-11 08:57:45,092 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 10:58:16] 2025-10-11 08:57:45,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 10:58:16] 2025-10-11 08:57:45,097 | INFO     | did not find any defunct processes belonging to 3414919
[2025-10-11 10:58:16] 2025-10-11 08:57:45,100 | INFO     | did not find any defunct processes belonging to 3414919
[2025-10-11 10:58:16] 2025-10-11 08:57:45,101 | INFO     | ready for new job
[2025-10-11 10:58:16] 2025-10-11 08:57:45,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 10:58:16] 2025-10-11 08:57:45,104 | INFO     | ***************************************
[2025-10-11 10:58:16] 2025-10-11 08:57:45,104 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 10:58:16] 2025-10-11 08:57:45,104 | INFO     | ***************************************
[2025-10-11 10:58:16] 2025-10-11 08:57:45,104 | INFO     | 
[2025-10-11 10:58:16] 2025-10-11 08:57:45,106 | INFO     | architecture information:
[2025-10-11 10:58:16] 2025-10-11 08:57:45,106 | INFO     | executing command: cat /etc/os-release
[2025-10-11 10:58:16] 2025-10-11 08:57:45,129 | INFO     | cat /etc/os-release:
[2025-10-11 10:58:16] NAME="CentOS Linux"
[2025-10-11 10:58:16] VERSION="7 (Core)"
[2025-10-11 10:58:16] ID="centos"
[2025-10-11 10:58:16] ID_LIKE="rhel fedora"
[2025-10-11 10:58:16] VERSION_ID="7"
[2025-10-11 10:58:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 10:58:16] ANSI_COLOR="0;31"
[2025-10-11 10:58:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 10:58:16] HOME_URL="https://www.centos.org/"
[2025-10-11 10:58:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 10:58:16] 
[2025-10-11 10:58:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 10:58:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 10:58:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 10:58:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 10:58:16] 
[2025-10-11 10:58:16] 2025-10-11 08:57:45,130 | INFO     | ***************************************
[2025-10-11 10:58:16] 2025-10-11 08:57:45,633 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-11 10:58:16] 2025-10-11 08:57:45,646 | INFO     | sufficient remaining disk space (331397201920 B)
[2025-10-11 10:58:16] 2025-10-11 08:57:45,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 10:58:16] 2025-10-11 08:57:45,646 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 10:58:16] 2025-10-11 08:57:45,646 | INFO     | update_server=False
[2025-10-11 10:58:16] 2025-10-11 08:57:45,646 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 10:58:16] 2025-10-11 08:57:45,646 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:58:16] 2025-10-11 08:57:46,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 10:58:16] 2025-10-11 08:57:46,155 | INFO     | all job control threads have been joined
[2025-10-11 10:58:16] 2025-10-11 08:57:46,220 | INFO     | all data control threads have been joined
[2025-10-11 10:58:16] 2025-10-11 08:57:46,247 | INFO     | all payload control threads have been joined
[2025-10-11 10:58:16] 2025-10-11 08:57:46,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:58:16] 2025-10-11 08:57:46,432 | INFO     | aborting loop
[2025-10-11 10:58:16] 2025-10-11 08:57:46,652 | INFO     | [job] retrieve thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:46,653 | INFO     | [job] queue monitor thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:46,674 | INFO     | [data] copytool_in thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:47,093 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:47,146 | INFO     | [job] validate thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:47,160 | INFO     | [job] control thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:47,226 | INFO     | [data] control thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:47,253 | INFO     | [payload] control thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:47,284 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:47,334 | INFO     | [payload] validate_post thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:47,437 | INFO     | [job] job monitor thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:47,444 | INFO     | [payload] failed_post thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:47,807 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:48,141 | INFO     | [data] copytool_out thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:48,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 10:58:16] 2025-10-11 08:57:52,693 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:57:56,639 | INFO     | job.realtimelogging is not enabled
[2025-10-11 10:58:16] 2025-10-11 08:57:57,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 10:58:16] 2025-10-11 08:58:05,352 | INFO     | [monitor] cgroup control has ended
[2025-10-11 10:58:16] 2025-10-11 08:58:06,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771609814848)>', '<ExcThread(monitor, started 139770986493696)>']
[2025-10-11 10:58:16] 2025-10-11 08:58:11,308 | INFO     | all workflow threads have been joined
[2025-10-11 10:58:16] 2025-10-11 08:58:11,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 10:58:16] 2025-10-11 08:58:11,309 | INFO     | traces error code: 0
[2025-10-11 10:58:16] 2025-10-11 08:58:11,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 10:58:16] 2025-10-11 08:58:15,877 | INFO     | PID=3408468 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 10:58:16] 2025-10-11 08:58:15,877 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 10:58:16] 2025-10-11 08:58:15,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 10:58:16] 2025-10-11 08:58:15,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 10:58:16] 2025-10-11 08:58:15,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 10:58:16] 2025-10-11 08:58:15,877 | INFO     | [monitor] control thread has ended
[2025-10-11 10:58:16] 2025-10-11 08:58:15,921 [wrapper] ==== pilot stdout END ====
[2025-10-11 10:58:16] 2025-10-11 08:58:15,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 10:58:16] 2025-10-11 08:58:15,926 [wrapper] pilotpid: 3408468
[2025-10-11 10:58:16] 2025-10-11 08:58:15,929 [wrapper] Pilot exit status: 0
[2025-10-11 10:58:16] 2025-10-11 08:58:15,936 [wrapper] pandaids: 6837669953
[2025-10-11 10:58:16] 2025-10-11 08:58:15,951 [wrapper] cleanup supervisor_pilot 3426778 3408469
[2025-10-11 10:58:16] 2025-10-11 08:58:15,954 [wrapper] Test setup, not cleaning
[2025-10-11 10:58:16] 2025-10-11 08:58:15,957 [wrapper] apfmon messages muted
[2025-10-11 10:58:16] 2025-10-11 08:58:15,959 [wrapper] ==== wrapper stdout END ====
[2025-10-11 10:58:16] 2025-10-11 08:58:15,962 [wrapper] ==== wrapper stderr END ====
[2025-10-11 10:58:16]  *** Error codes and diagnostics ***
[2025-10-11 10:58:16]     "exeErrorCode": 0,
[2025-10-11 10:58:16]     "exeErrorDiag": "",
[2025-10-11 10:58:16]     "pilotErrorCode": 0,
[2025-10-11 10:58:16]     "pilotErrorDiag": "",
[2025-10-11 10:58:16]  *** Listing of results directory ***
[2025-10-11 10:58:16] total 408464
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc    557409 Oct 10 18:45 pilot3.tar.gz
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc      5112 Oct 10 18:56 queuedata.json
[2025-10-11 10:58:16] -rwx------ 1 boinc boinc     36292 Oct 10 18:56 runpilot2-wrapper.sh
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc       100 Oct 11 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 10:58:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 09:28 run_atlas
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc       105 Oct 11 09:28 job.xml
[2025-10-11 10:58:16] -rw-r--r-- 2 boinc boinc 221701407 Oct 11 09:28 EVNT.46676267._001704.pool.root.1
[2025-10-11 10:58:16] drwxrwx--x 2 boinc boinc      4096 Oct 11 09:28 shared
[2025-10-11 10:58:16] -rw-r--r-- 2 boinc boinc    569683 Oct 11 09:28 input.tar.gz
[2025-10-11 10:58:16] -rw-r--r-- 2 boinc boinc     15120 Oct 11 09:28 start_atlas.sh
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc         0 Oct 11 09:28 boinc_setup_complete
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc      6200 Oct 11 09:28 init_data.xml
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc         0 Oct 11 09:28 boinc_lockfile
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc      2549 Oct 11 09:28 pandaJob.out
[2025-10-11 10:58:16] -rw------- 1 boinc boinc    975525 Oct 11 09:28 agis_schedconf.cvmfs.json
[2025-10-11 10:58:16] -rw------- 1 boinc boinc   1560580 Oct 11 09:28 agis_ddmendpoints.agis.ALL.json
[2025-10-11 10:58:16] drwx------ 5 boinc boinc      4096 Oct 11 09:28 pilot3
[2025-10-11 10:58:16] -rw------- 1 boinc boinc 190571281 Oct 11 10:57 HITS.46676269._042058.pool.root.1
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc       529 Oct 11 10:57 boinc_task_state.xml
[2025-10-11 10:58:16] -rw------- 1 boinc boinc        95 Oct 11 10:57 pilot_heartbeat.json
[2025-10-11 10:58:16] -rw------- 1 boinc boinc      1017 Oct 11 10:57 memory_monitor_summary.json
[2025-10-11 10:58:16] -rw------- 1 boinc boinc    268891 Oct 11 10:57 log.46676269._042058.job.log.tgz.1
[2025-10-11 10:58:16] -rw------- 1 boinc boinc      7768 Oct 11 10:57 heartbeat.json
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc        27 Oct 11 10:57 wrapper_checkpoint.txt
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc      8192 Oct 11 10:57 boinc_mmap_file
[2025-10-11 10:58:16] -rw------- 1 boinc boinc       747 Oct 11 10:58 pilotlog.txt
[2025-10-11 10:58:16] -rw------- 1 boinc boinc    777888 Oct 11 10:58 log.46676269._042058.job.log.1
[2025-10-11 10:58:16] -rw------- 1 boinc boinc       357 Oct 11 10:58 output.list
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc       620 Oct 11 10:58 runtime_log
[2025-10-11 10:58:16] -rw------- 1 boinc boinc   1064960 Oct 11 10:58 result.tar.gz
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc      8787 Oct 11 10:58 runtime_log.err
[2025-10-11 10:58:16] -rw------- 1 boinc boinc       660 Oct 11 10:58 RjKODm4aVR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEvdNDmwnL3am.diag
[2025-10-11 10:58:16] -rw-r--r-- 1 boinc boinc     22243 Oct 11 10:58 stderr.txt
[2025-10-11 10:58:16] HITS file was successfully produced:
[2025-10-11 10:58:16] -rw------- 1 boinc boinc 190571281 Oct 11 10:57 shared/HITS.pool.root.1
[2025-10-11 10:58:16]  *** Contents of shared directory: ***
[2025-10-11 10:58:16] total 404240
[2025-10-11 10:58:16] -rw-r--r-- 2 boinc boinc 221701407 Oct 11 09:28 ATLAS.root_0
[2025-10-11 10:58:16] -rw-r--r-- 2 boinc boinc    569683 Oct 11 09:28 input.tar.gz
[2025-10-11 10:58:16] -rw-r--r-- 2 boinc boinc     15120 Oct 11 09:28 start_atlas.sh
[2025-10-11 10:58:16] -rw------- 1 boinc boinc 190571281 Oct 11 10:57 HITS.pool.root.1
[2025-10-11 10:58:16] -rw------- 1 boinc boinc   1064960 Oct 11 10:58 result.tar.gz
10:58:17 (3404739): run_atlas exited; CPU time 15251.352249
10:58:17 (3404739): called boinc_finish(0)

</stderr_txt>
]]>

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