Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:40:39 (208613): wrapper (7.7.26015): starting
18:40:39 (208613): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 18:40:39] Arguments: --nthreads 8
[2025-10-10 18:40:39] Threads: 8
[2025-10-10 18:40:39] Checking for CVMFS
[2025-10-10 18:40:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 18:40:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 18:40:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 18:40:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 18:40:42] 2.13.2.0 2356181 126995 247000 151564 2 179 24266563 32935936 23524 16776704 0 117015216 99.724 88718966 30425 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 18:40:42] CVMFS is ok
[2025-10-10 18:40:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 18:40:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 18:40:42] Further information can be found at the LHC@home message board.
[2025-10-10 18:40:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 18:40:42] Checking for apptainer binary...
[2025-10-10 18:40:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 18:40:42] Running /usr/bin/apptainer --version
[2025-10-10 18:40:43] apptainer version 1.4.3-1.el9
[2025-10-10 18:40:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 18:40:44] c-6-2.aglt2.org
[2025-10-10 18:40:44] apptainer works
[2025-10-10 18:40:44] Set ATHENA_PROC_NUMBER=8
[2025-10-10 18:40:44] Set ATHENA_CORE_NUMBER=8
[2025-10-10 18:40:44] Starting ATLAS job with PandaID=6837730765
[2025-10-10 18:40:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:37:36]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:37:36] 2025-10-11 11:36:56,454 | INFO     | time since job start (46489s) is within the limit (172800.0s)
[2025-10-11 07:37:36] 2025-10-11 11:36:57,212 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 07:37:36] 2025-10-11 11:36:57,219 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0353000000005
[2025-10-11 07:37:36] 2025-10-11 11:36:57,232 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837730765/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 07:37:36] 2025-10-11 11:36:57,233 | INFO     | extracted standard info from prmon json
[2025-10-11 07:37:36] 2025-10-11 11:36:57,233 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:37:36] 2025-10-11 11:36:57,233 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:37:36] 2025-10-11 11:36:57,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:37:36] 2025-10-11 11:36:57,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:37:36] 2025-10-11 11:36:57,249 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:37:36] 2025-10-11 11:36:57,251 | INFO     | sum of square deviations: 135584113844.65094
[2025-10-11 07:37:36] 2025-10-11 11:36:57,283 | INFO     | sum of deviations: 51597958745.860435
[2025-10-11 07:37:36] 2025-10-11 11:36:57,283 | INFO     | mean x: 1760159415.4361002
[2025-10-11 07:37:36] 2025-10-11 11:36:57,283 | INFO     | mean y: 2098628.5744400527
[2025-10-11 07:37:36] 2025-10-11 11:36:57,283 | INFO     | -- intersect: -667748526.2911355
[2025-10-11 07:37:36] 2025-10-11 11:36:57,284 | INFO     | intersect: -667748526.2911355
[2025-10-11 07:37:36] 2025-10-11 11:36:57,285 | INFO     | chi2: 3.900103929365706
[2025-10-11 07:37:36] 2025-10-11 11:36:57,286 | INFO     | sum of square deviations: 132922239732.94441
[2025-10-11 07:37:36] 2025-10-11 11:36:57,302 | INFO     | sum of deviations: 102245945981.64185
[2025-10-11 07:37:36] 2025-10-11 11:36:57,302 | INFO     | mean x: 1760159262.9363396
[2025-10-11 07:37:36] 2025-10-11 11:36:57,302 | INFO     | mean y: 2101520.8050397877
[2025-10-11 07:37:36] 2025-10-11 11:36:57,302 | INFO     | -- intersect: -1351841576.1428719
[2025-10-11 07:37:36] 2025-10-11 11:36:57,303 | INFO     | intersect: -1351841576.1428719
[2025-10-11 07:37:36] 2025-10-11 11:36:57,304 | INFO     | chi2: 3.223656031293575
[2025-10-11 07:37:36] 2025-10-11 11:36:57,304 | INFO     | current chi2=3.223656031293575 (change=17.344355697263307 %)
[2025-10-11 07:37:36] 2025-10-11 11:36:57,304 | INFO     | right removable region: 753
[2025-10-11 07:37:36] 2025-10-11 11:36:57,305 | INFO     | sum of square deviations: 132922176476.07024
[2025-10-11 07:37:36] 2025-10-11 11:36:57,320 | INFO     | sum of deviations: -102621863634.4469
[2025-10-11 07:37:36] 2025-10-11 11:36:57,321 | INFO     | mean x: 1760159567.9376657
[2025-10-11 07:37:36] 2025-10-11 11:36:57,321 | INFO     | mean y: 2107453.075596817
[2025-10-11 07:37:36] 2025-10-11 11:36:57,321 | INFO     | -- intersect: 1361029342.142654
[2025-10-11 07:37:36] 2025-10-11 11:36:57,321 | INFO     | intersect: 1361029342.142654
[2025-10-11 07:37:36] 2025-10-11 11:36:57,322 | INFO     | chi2: 1.6056221818778358
[2025-10-11 07:37:36] 2025-10-11 11:36:57,323 | INFO     | current chi2=1.6056221818778358 (change=58.83129755111509 %)
[2025-10-11 07:37:36] 2025-10-11 11:36:57,324 | INFO     | sum of square deviations: 130295355648.3629
[2025-10-11 07:37:36] 2025-10-11 11:36:57,338 | INFO     | sum of deviations: -153252479357.1629
[2025-10-11 07:37:36] 2025-10-11 11:36:57,338 | INFO     | mean x: 1760159720.4379172
[2025-10-11 07:37:36] 2025-10-11 11:36:57,338 | INFO     | mean y: 2110391.9212283045
[2025-10-11 07:37:36] 2025-10-11 11:36:57,339 | INFO     | -- intersect: 2072397854.4284217
[2025-10-11 07:37:36] 2025-10-11 11:36:57,339 | INFO     | intersect: 2072397854.4284217
[2025-10-11 07:37:36] 2025-10-11 11:36:57,340 | INFO     | chi2: 1.3645823280125988
[2025-10-11 07:37:36] 2025-10-11 11:36:57,340 | INFO     | current chi2=1.3645823280125988 (change=15.012239902125152 %)
[2025-10-11 07:37:36] 2025-10-11 11:36:57,340 | INFO     | left removable region: 20
[2025-10-11 07:37:36] 2025-10-11 11:36:57,341 | INFO     | sum of square deviations: 122122532820.54877
[2025-10-11 07:37:36] 2025-10-11 11:36:57,356 | INFO     | sum of deviations: -90425432529.03429
[2025-10-11 07:37:36] 2025-10-11 11:36:57,356 | INFO     | mean x: 1760159842.4392905
[2025-10-11 07:37:36] 2025-10-11 11:36:57,356 | INFO     | mean y: 2113177.5497953617
[2025-10-11 07:37:36] 2025-10-11 11:36:57,357 | INFO     | -- intersect: 1305420694.981405
[2025-10-11 07:37:36] 2025-10-11 11:36:57,357 | INFO     | intersect: 1305420694.981405
[2025-10-11 07:37:36] 2025-10-11 11:36:57,358 | INFO     | chi2: 0.6360398663358231
[2025-10-11 07:37:36] 2025-10-11 11:36:57,358 | INFO     | -- intersect: 1305420694.981405
[2025-10-11 07:37:36] 2025-10-11 11:36:57,358 | INFO     | current memory leak: -0.74 B/s (using 733 data points, chi2=0.64)
[2025-10-11 07:37:36] 2025-10-11 11:36:57,359 | INFO     | could have reported an average CPU frequency of 2600 MHz (29 samples)
[2025-10-11 07:37:36] 2025-10-11 11:36:57,360 | INFO     | ..............................
[2025-10-11 07:37:36] 2025-10-11 11:36:57,360 | INFO     | . Timing measurements:
[2025-10-11 07:37:36] 2025-10-11 11:36:57,360 | INFO     | . get job = 0 s
[2025-10-11 07:37:36] 2025-10-11 11:36:57,360 | INFO     | . initial setup = 5 s
[2025-10-11 07:37:36] 2025-10-11 11:36:57,360 | INFO     | . payload setup = 48 s
[2025-10-11 07:37:36] 2025-10-11 11:36:57,360 | INFO     | . stage-in = 0 s
[2025-10-11 07:37:36] 2025-10-11 11:36:57,361 | INFO     | . payload execution = 46316 s
[2025-10-11 07:37:36] 2025-10-11 11:36:57,361 | INFO     | . stage-out = 11 s
[2025-10-11 07:37:36] 2025-10-11 11:36:57,361 | INFO     | . log creation = 0 s
[2025-10-11 07:37:36] 2025-10-11 11:36:57,361 | INFO     | ..............................
[2025-10-11 07:37:36] 2025-10-11 11:36:57,496 | INFO     | 
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | job summary report
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | --------------------------------------------------
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | PanDA job id: 6837730765
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | task id: 46676269
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | errors: (none)
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | pilot state: finished 
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | transexitcode: 0
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | exeerrorcode: 0
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | exeerrordiag: 
[2025-10-11 07:37:36] 2025-10-11 11:36:57,497 | INFO     | exitcode: 0
[2025-10-11 07:37:36] 2025-10-11 11:36:57,498 | INFO     | exitmsg: OK
[2025-10-11 07:37:36] 2025-10-11 11:36:57,498 | INFO     | cpuconsumptiontime: 50298 s
[2025-10-11 07:37:36] 2025-10-11 11:36:57,498 | INFO     | nevents: 400
[2025-10-11 07:37:36] 2025-10-11 11:36:57,498 | INFO     | neventsw: 0
[2025-10-11 07:37:36] 2025-10-11 11:36:57,498 | INFO     | pid: 229172
[2025-10-11 07:37:36] 2025-10-11 11:36:57,498 | INFO     | pgrp: 229172
[2025-10-11 07:37:36] 2025-10-11 11:36:57,498 | INFO     | corecount: 8
[2025-10-11 07:37:36] 2025-10-11 11:36:57,498 | INFO     | event service: False
[2025-10-11 07:37:36] 2025-10-11 11:36:57,498 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348714, 3: 2348941, 14: 2348941, 25: 2348969, 37: 2349125, 40: 2349415, 48: 2349443, 46370: 2394596, 46371: 2394595, 46382: 240
[2025-10-11 07:37:36] 2025-10-11 11:36:57,498 | INFO     | --------------------------------------------------
[2025-10-11 07:37:36] 2025-10-11 11:36:57,499 | INFO     | 
[2025-10-11 07:37:36] 2025-10-11 11:36:57,499 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 07:37:36] 2025-10-11 11:36:57,554 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,554 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,554 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,554 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:37:36] 2025-10-11 11:36:57,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,556 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:37:36] 2025-10-11 11:36:57,557 | INFO     | job 6837730765 has completed (purged errors)
[2025-10-11 07:37:36] 2025-10-11 11:36:57,557 | INFO     | overall cleanup function is called
[2025-10-11 07:37:36] 2025-10-11 11:36:58,163 | INFO     | PID=215402 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 07:37:36] 2025-10-11 11:36:58,173 | INFO     | .. there are 38 such processes running
[2025-10-11 07:37:36] 2025-10-11 11:36:58,574 | INFO     | --- collectZombieJob: --- 10, [229172]
[2025-10-11 07:37:36] 2025-10-11 11:36:58,575 | INFO     | zombie collector waiting for pid 229172
[2025-10-11 07:37:36] 2025-10-11 11:36:58,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:37:36] 2025-10-11 11:36:58,575 | INFO     | collected zombie processes
[2025-10-11 07:37:36] 2025-10-11 11:36:58,575 | INFO     | will attempt to kill all subprocesses of pid=229172
[2025-10-11 07:37:36] 2025-10-11 11:37:01,807 | INFO     | process IDs to be killed: [229172] (in reverse order)
[2025-10-11 07:37:36] 2025-10-11 11:37:01,972 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:37:36] 2025-10-11 11:37:01,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:37:36] 2025-10-11 11:37:01,991 | INFO     | did not find any defunct processes belonging to 229172
[2025-10-11 07:37:36] 2025-10-11 11:37:02,008 | INFO     | did not find any defunct processes belonging to 229172
[2025-10-11 07:37:36] 2025-10-11 11:37:02,009 | INFO     | ready for new job
[2025-10-11 07:37:36] 2025-10-11 11:37:02,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:37:36] 2025-10-11 11:37:02,041 | INFO     | ***************************************
[2025-10-11 07:37:36] 2025-10-11 11:37:02,064 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:37:36] 2025-10-11 11:37:02,065 | INFO     | ***************************************
[2025-10-11 07:37:36] 2025-10-11 11:37:02,065 | INFO     | 
[2025-10-11 07:37:36] 2025-10-11 11:37:02,080 | INFO     | architecture information:
[2025-10-11 07:37:36] 2025-10-11 11:37:02,092 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:37:36] 2025-10-11 11:37:02,208 | INFO     | cat /etc/os-release:
[2025-10-11 07:37:36] NAME="CentOS Linux"
[2025-10-11 07:37:36] VERSION="7 (Core)"
[2025-10-11 07:37:36] ID="centos"
[2025-10-11 07:37:36] ID_LIKE="rhel fedora"
[2025-10-11 07:37:36] VERSION_ID="7"
[2025-10-11 07:37:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:37:36] ANSI_COLOR="0;31"
[2025-10-11 07:37:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:37:36] HOME_URL="https://www.centos.org/"
[2025-10-11 07:37:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:37:36] 
[2025-10-11 07:37:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:37:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:37:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:37:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:37:36] 
[2025-10-11 07:37:36] 2025-10-11 11:37:02,208 | INFO     | ***************************************
[2025-10-11 07:37:36] 2025-10-11 11:37:02,712 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 07:37:36] 2025-10-11 11:37:02,936 | INFO     | sufficient remaining disk space (75251056640 B)
[2025-10-11 07:37:36] 2025-10-11 11:37:02,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:37:36] 2025-10-11 11:37:02,937 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:37:36] 2025-10-11 11:37:02,937 | INFO     | update_server=False
[2025-10-11 07:37:36] 2025-10-11 11:37:02,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:37:36] 2025-10-11 11:37:02,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:37:36] 2025-10-11 11:37:02,937 | INFO     | aborting loop
[2025-10-11 07:37:36] 2025-10-11 11:37:02,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:37:36] 2025-10-11 11:37:03,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:37:36] 2025-10-11 11:37:03,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:37:36] 2025-10-11 11:37:03,619 | INFO     | all payload control threads have been joined
[2025-10-11 07:37:36] 2025-10-11 11:37:03,945 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:03,947 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:03,948 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:04,053 | INFO     | all data control threads have been joined
[2025-10-11 07:37:36] 2025-10-11 11:37:04,146 | INFO     | all job control threads have been joined
[2025-10-11 07:37:36] 2025-10-11 11:37:04,157 | INFO     | [job] validate thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:04,357 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:04,625 | INFO     | [payload] control thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:04,700 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:04,848 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:04,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:05,062 | INFO     | [data] control thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:05,152 | INFO     | [job] control thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:05,347 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:05,348 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:05,364 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:05,562 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:07,356 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:37:36] 2025-10-11 11:37:29,626 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:37:36] 2025-10-11 11:37:30,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200649021248)>', '<ExcThread(monitor, started 140199912781568)>']
[2025-10-11 07:37:36] 2025-10-11 11:37:31,924 | INFO     | PID=215402 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 07:37:36] 2025-10-11 11:37:31,925 | INFO     | .. there are 38 such processes running
[2025-10-11 07:37:36] 2025-10-11 11:37:31,925 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:37:36] 2025-10-11 11:37:31,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:37:36] 2025-10-11 11:37:31,925 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:37:36] 2025-10-11 11:37:31,925 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:37:36] 2025-10-11 11:37:31,926 | INFO     | [monitor] control thread has ended
[2025-10-11 07:37:36] 2025-10-11 11:37:35,408 | INFO     | all workflow threads have been joined
[2025-10-11 07:37:36] 2025-10-11 11:37:35,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:37:36] 2025-10-11 11:37:35,409 | INFO     | traces error code: 0
[2025-10-11 07:37:36] 2025-10-11 11:37:35,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:37:36] 2025-10-11 11:37:35,880 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:37:36] 2025-10-11 11:37:35,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:37:36] 2025-10-11 11:37:35,885 [wrapper] pilotpid: 215402
[2025-10-11 07:37:36] 2025-10-11 11:37:35,887 [wrapper] Pilot exit status: 0
[2025-10-11 07:37:36] 2025-10-11 11:37:35,900 [wrapper] pandaids: 6837730765
[2025-10-11 07:37:36] 2025-10-11 11:37:35,990 [wrapper] cleanup supervisor_pilot 2622681 215403
[2025-10-11 07:37:36] 2025-10-11 11:37:35,993 [wrapper] Test setup, not cleaning
[2025-10-11 07:37:36] 2025-10-11 11:37:35,996 [wrapper] apfmon messages muted
[2025-10-11 07:37:36] 2025-10-11 11:37:35,998 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:37:36] 2025-10-11 11:37:36,001 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:37:36]  *** Error codes and diagnostics ***
[2025-10-11 07:37:36]     "exeErrorCode": 0,
[2025-10-11 07:37:36]     "exeErrorDiag": "",
[2025-10-11 07:37:36]     "pilotErrorCode": 0,
[2025-10-11 07:37:36]     "pilotErrorDiag": "",
[2025-10-11 07:37:36]  *** Listing of results directory ***
[2025-10-11 07:37:36] total 417908
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 15:26 queuedata.json
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 15:27 pilot3.tar.gz
[2025-10-11 07:37:36] -rwx------. 1 boincer umatlas     36292 Oct 10 15:28 runpilot2-wrapper.sh
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas       100 Oct 10 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:37:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 18:40 run_atlas
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas       105 Oct 10 18:40 job.xml
[2025-10-11 07:37:36] -rw-r--r--. 2 boincer umatlas 219898755 Oct 10 18:40 EVNT.46676267._001781.pool.root.1
[2025-10-11 07:37:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:40 start_atlas.sh
[2025-10-11 07:37:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 18:40 shared
[2025-10-11 07:37:36] -rw-r--r--. 2 boincer umatlas    569684 Oct 10 18:40 input.tar.gz
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas         0 Oct 10 18:40 boinc_lockfile
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 18:40 pandaJob.out
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas    975517 Oct 10 18:42 agis_schedconf.cvmfs.json
[2025-10-11 07:37:36] drwx------. 5 boincer umatlas      4096 Oct 10 18:42 pilot3
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas      6656 Oct 11 07:29 init_data.xml
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas 191066025 Oct 11 07:34 HITS.46676269._044011.pool.root.1
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas       531 Oct 11 07:34 boinc_task_state.xml
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas      1053 Oct 11 07:36 memory_monitor_summary.json
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas   1560580 Oct 11 07:36 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas    870668 Oct 11 07:36 log.46676269._044011.job.log.tgz.1
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas        95 Oct 11 07:36 pilot_heartbeat.json
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas      7826 Oct 11 07:36 heartbeat.json
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 07:37 boinc_mmap_file
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas        28 Oct 11 07:37 wrapper_checkpoint.txt
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas      4823 Oct 11 07:37 pilotlog.txt
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas   5666565 Oct 11 07:37 log.46676269._044011.job.log.1
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas       357 Oct 11 07:37 output.list
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas       620 Oct 11 07:37 runtime_log
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas   6553600 Oct 11 07:37 result.tar.gz
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas       657 Oct 11 07:37 V6LKDmoxXR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmFeNDmPzZgCo.diag
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas      8689 Oct 11 07:37 runtime_log.err
[2025-10-11 07:37:36] -rw-r--r--. 1 boincer umatlas     21308 Oct 11 07:37 stderr.txt
[2025-10-11 07:37:36] HITS file was successfully produced:
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas 191066025 Oct 11 07:34 shared/HITS.pool.root.1
[2025-10-11 07:37:36]  *** Contents of shared directory: ***
[2025-10-11 07:37:36] total 408316
[2025-10-11 07:37:36] -rw-r--r--. 2 boincer umatlas 219898755 Oct 10 18:40 ATLAS.root_0
[2025-10-11 07:37:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:40 start_atlas.sh
[2025-10-11 07:37:36] -rw-r--r--. 2 boincer umatlas    569684 Oct 10 18:40 input.tar.gz
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas 191066025 Oct 11 07:34 HITS.pool.root.1
[2025-10-11 07:37:36] -rw-------. 1 boincer umatlas   6553600 Oct 11 07:37 result.tar.gz
07:37:37 (208613): run_atlas exited; CPU time 52382.792416
07:37:37 (208613): called boinc_finish(0)

</stderr_txt>
]]>

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