Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
10:39:47 (88864): wrapper (7.7.26015): starting
10:39:47 (88864): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 10:39:47] Arguments: --nthreads 12
[2025-10-11 10:39:47] Threads: 12
[2025-10-11 10:39:47] Checking for CVMFS
[2025-10-11 10:39:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:39:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:39:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:39:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:39:47] 2.13.2.0 4155 103 46768 151577 1 57 3038541 4096001 0 130560 0 179204 99.989 5372 479 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 10:39:47] CVMFS is ok
[2025-10-11 10:39:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:39:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:39:47] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 10:39:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 10:39:47] Further information can be found at the LHC@home message board.
[2025-10-11 10:39:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:39:47] Checking for apptainer binary...
[2025-10-11 10:39:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:39:47] Running /usr/bin/apptainer --version
[2025-10-11 10:39:47] apptainer version 1.4.3
[2025-10-11 10:39:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:39:47] pc2
[2025-10-11 10:39:47] apptainer works
[2025-10-11 10:39:47] Set ATHENA_PROC_NUMBER=12
[2025-10-11 10:39:47] Set ATHENA_CORE_NUMBER=12
[2025-10-11 10:39:47] Starting ATLAS job with PandaID=6837630878
[2025-10-11 10:39:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:25:01]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:25:01] 2025-10-11 09:23:46,353 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-11 11:25:01] 2025-10-11 09:23:46,353 | WARNING  | maxPSS not found in memory monitor output
[2025-10-11 11:25:01] 2025-10-11 09:23:46,353 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3877954 B
[2025-10-11 11:25:01] 2025-10-11 09:23:46,353 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15303 B
[2025-10-11 11:25:01] 2025-10-11 09:23:46,354 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-11 11:25:01] 2025-10-11 09:23:46,360 | INFO     | sufficient remaining disk space (33193721856 B)
[2025-10-11 11:25:01] 2025-10-11 09:23:46,360 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-11 11:25:01] 2025-10-11 09:23:46,360 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6837630878: 4162074 B (within 2537553920 B limit)
[2025-10-11 11:25:01] 2025-10-11 09:23:46,360 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6837630878/HITS.46676269._039475.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-11 11:25:01] 2025-10-11 09:23:46,360 | INFO     | total size of present files: 0 B (workdir size: 4162074 B)
[2025-10-11 11:25:01] 2025-10-11 09:23:46,360 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6837630878/HITS.46676269._039475.pool.root.1 since it does not exist
[2025-10-11 11:25:01] 2025-10-11 09:23:46,396 | INFO     | number of running child processes to parent process 99017: 1
[2025-10-11 11:25:01] 2025-10-11 09:23:46,396 | INFO     | maximum number of monitored processes: 6
[2025-10-11 11:25:01] 2025-10-11 09:23:47,118 | INFO     | time since job start (2636s) is within the limit (172800.0s)
[2025-10-11 11:25:01] 2025-10-11 09:23:47,996 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 11:25:01] 2025-10-11 09:23:48,899 | INFO     | monitor loop #201: job 0:6837630878 is in state 'finished'
[2025-10-11 11:25:01] 2025-10-11 09:23:48,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:25:01] 2025-10-11 09:23:49,124 | INFO     | time since job start (2638s) is within the limit (172800.0s)
[2025-10-11 11:25:01] 2025-10-11 09:23:49,666 | INFO     | job 6837630878 has state=finished
[2025-10-11 11:25:01] 2025-10-11 09:23:49,667 | INFO     | preparing for final server update for job 6837630878 in state='finished'
[2025-10-11 11:25:01] 2025-10-11 09:23:49,668 | INFO     | this job has now completed (state=finished)
[2025-10-11 11:25:01] 2025-10-11 09:23:49,668 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 11:25:01] 2025-10-11 09:23:49,668 | INFO     | log transfer has been attempted: DONE
[2025-10-11 11:25:01] 2025-10-11 09:23:49,668 | INFO     | job 6837630878 has finished - writing final server update
[2025-10-11 11:25:01] 2025-10-11 09:23:49,669 | INFO     | total number of processed events: 400 (read)
[2025-10-11 11:25:01] 2025-10-11 09:23:49,670 | INFO     | executing command: lscpu
[2025-10-11 11:25:01] 2025-10-11 09:23:49,679 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 11:25:01] 2025-10-11 09:23:51,128 | INFO     | time since job start (2640s) is within the limit (172800.0s)
[2025-10-11 11:25:01] 2025-10-11 09:23:51,401 | INFO     | monitor loop #202: job 0:6837630878 is in state 'finished'
[2025-10-11 11:25:01] 2025-10-11 09:23:51,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:25:01] 2025-10-11 09:23:53,134 | INFO     | time since job start (2642s) is within the limit (172800.0s)
[2025-10-11 11:25:01] 2025-10-11 09:23:53,904 | INFO     | monitor loop #203: job 0:6837630878 is in state 'finished'
[2025-10-11 11:25:01] 2025-10-11 09:23:53,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:25:01] 2025-10-11 09:23:54,185 | INFO     | PID=92591 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 11:25:01] 2025-10-11 09:23:55,186 | INFO     | time since job start (2644s) is within the limit (172800.0s)
[2025-10-11 11:25:01] 2025-10-11 09:23:55,535 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 11:25:01] 2025-10-11 09:23:55,536 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 2753.4714166666668
[2025-10-11 11:25:01] 2025-10-11 09:23:55,537 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6837630878/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 11:25:01] 2025-10-11 09:23:55,537 | INFO     | extracted standard info from prmon json
[2025-10-11 11:25:01] 2025-10-11 09:23:55,537 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 11:25:01] 2025-10-11 09:23:55,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 11:25:01] 2025-10-11 09:23:55,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:25:01] 2025-10-11 09:23:55,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:25:01] 2025-10-11 09:23:55,537 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | sum of square deviations: 14456085.0
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | sum of deviations: -2642273102.5
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | mean x: 1760173380.5
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | mean y: 3036986.5833333335
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | -- intersect: 321726296017.75586
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | intersect: 321726296017.75586
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | chi2: 0.06877448449854667
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | -- intersect: 321726296017.75586
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | current memory leak: -182.78 B/s (using 36 data points, chi2=0.07)
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | could have reported an average CPU frequency of 3279 MHz (5 samples)
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | ..............................
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | . Timing measurements:
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | . get job = 0 s
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | . initial setup = 1 s
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | . payload setup = 1 s
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | . stage-in = 0 s
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | . payload execution = 2616 s
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | . stage-out = 0 s
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | . log creation = 0 s
[2025-10-11 11:25:01] 2025-10-11 09:23:55,538 | INFO     | ..............................
[2025-10-11 11:25:01] 2025-10-11 09:23:55,851 | INFO     | 
[2025-10-11 11:25:01] 2025-10-11 09:23:55,852 | INFO     | job summary report
[2025-10-11 11:25:01] 2025-10-11 09:23:55,852 | INFO     | --------------------------------------------------
[2025-10-11 11:25:01] 2025-10-11 09:23:55,852 | INFO     | PanDA job id: 6837630878
[2025-10-11 11:25:01] 2025-10-11 09:23:55,852 | INFO     | task id: 46676269
[2025-10-11 11:25:01] 2025-10-11 09:23:55,852 | INFO     | errors: (none)
[2025-10-11 11:25:01] 2025-10-11 09:23:55,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:25:01] 2025-10-11 09:23:55,852 | INFO     | pilot state: finished 
[2025-10-11 11:25:01] 2025-10-11 09:23:55,853 | INFO     | transexitcode: 0
[2025-10-11 11:25:01] 2025-10-11 09:23:55,853 | INFO     | exeerrorcode: 0
[2025-10-11 11:25:01] 2025-10-11 09:23:55,853 | INFO     | exeerrordiag: 
[2025-10-11 11:25:01] 2025-10-11 09:23:55,853 | INFO     | exitcode: 0
[2025-10-11 11:25:01] 2025-10-11 09:23:55,853 | INFO     | exitmsg: OK
[2025-10-11 11:25:01] 2025-10-11 09:23:55,853 | INFO     | cpuconsumptiontime: 27726 s
[2025-10-11 11:25:01] 2025-10-11 09:23:55,853 | INFO     | nevents: 400
[2025-10-11 11:25:01] 2025-10-11 09:23:55,854 | INFO     | neventsw: 0
[2025-10-11 11:25:01] 2025-10-11 09:23:55,854 | INFO     | pid: 99017
[2025-10-11 11:25:01] 2025-10-11 09:23:55,854 | INFO     | pgrp: 99017
[2025-10-11 11:25:01] 2025-10-11 09:23:55,854 | INFO     | corecount: 12
[2025-10-11 11:25:01] 2025-10-11 09:23:55,854 | INFO     | event service: False
[2025-10-11 11:25:01] 2025-10-11 09:23:55,854 | INFO     | sizes: {0: 2348806, 1: 2349068, 11: 2349096, 2621: 2374305, 2622: 2383303, 2624: 2383451, 2632: 2383805}
[2025-10-11 11:25:01] 2025-10-11 09:23:55,854 | INFO     | --------------------------------------------------
[2025-10-11 11:25:01] 2025-10-11 09:23:55,854 | INFO     | 
[2025-10-11 11:25:01] 2025-10-11 09:23:55,855 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:25:01] 2025-10-11 09:23:55,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,871 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:25:01] 2025-10-11 09:23:55,871 | INFO     | job 6837630878 has completed (purged errors)
[2025-10-11 11:25:01] 2025-10-11 09:23:55,871 | INFO     | overall cleanup function is called
[2025-10-11 11:25:01] 2025-10-11 09:23:56,876 | INFO     | --- collectZombieJob: --- 10, [99017]
[2025-10-11 11:25:01] 2025-10-11 09:23:56,877 | INFO     | zombie collector waiting for pid 99017
[2025-10-11 11:25:01] 2025-10-11 09:23:56,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:25:01] 2025-10-11 09:23:56,877 | INFO     | collected zombie processes
[2025-10-11 11:25:01] 2025-10-11 09:23:56,877 | INFO     | will attempt to kill all subprocesses of pid=99017
[2025-10-11 11:25:01] 2025-10-11 09:23:56,930 | INFO     | process IDs to be killed: [99017] (in reverse order)
[2025-10-11 11:25:01] 2025-10-11 09:23:56,947 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:25:01] 2025-10-11 09:23:56,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:25:01] 2025-10-11 09:23:56,948 | INFO     | did not find any defunct processes belonging to 99017
[2025-10-11 11:25:01] 2025-10-11 09:23:56,950 | INFO     | did not find any defunct processes belonging to 99017
[2025-10-11 11:25:01] 2025-10-11 09:23:56,950 | INFO     | ready for new job
[2025-10-11 11:25:01] 2025-10-11 09:23:56,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:25:01] 2025-10-11 09:23:56,950 | INFO     | ***************************************
[2025-10-11 11:25:01] 2025-10-11 09:23:56,950 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:25:01] 2025-10-11 09:23:56,950 | INFO     | ***************************************
[2025-10-11 11:25:01] 2025-10-11 09:23:56,950 | INFO     | 
[2025-10-11 11:25:01] 2025-10-11 09:23:56,951 | INFO     | architecture information:
[2025-10-11 11:25:01] 2025-10-11 09:23:56,951 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:25:01] 2025-10-11 09:23:56,956 | INFO     | cat /etc/os-release:
[2025-10-11 11:25:01] NAME="CentOS Linux"
[2025-10-11 11:25:01] VERSION="7 (Core)"
[2025-10-11 11:25:01] ID="centos"
[2025-10-11 11:25:01] ID_LIKE="rhel fedora"
[2025-10-11 11:25:01] VERSION_ID="7"
[2025-10-11 11:25:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:25:01] ANSI_COLOR="0;31"
[2025-10-11 11:25:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:25:01] HOME_URL="https://www.centos.org/"
[2025-10-11 11:25:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:25:01] 
[2025-10-11 11:25:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:25:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:25:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:25:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:25:01] 
[2025-10-11 11:25:01] 2025-10-11 09:23:56,956 | INFO     | ***************************************
[2025-10-11 11:25:01] 2025-10-11 09:23:57,458 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-11 11:25:01] 2025-10-11 09:23:57,465 | INFO     | sufficient remaining disk space (33196867584 B)
[2025-10-11 11:25:01] 2025-10-11 09:23:57,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:25:01] 2025-10-11 09:23:57,465 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:25:01] 2025-10-11 09:23:57,465 | INFO     | update_server=False
[2025-10-11 11:25:01] 2025-10-11 09:23:57,465 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:25:01] 2025-10-11 09:23:57,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:25:01] 2025-10-11 09:23:57,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:25:01] 2025-10-11 09:23:57,465 | INFO     | aborting loop
[2025-10-11 11:25:01] 2025-10-11 09:23:57,484 | INFO     | all data control threads have been joined
[2025-10-11 11:25:01] 2025-10-11 09:23:58,374 | INFO     | all payload control threads have been joined
[2025-10-11 11:25:01] 2025-10-11 09:23:58,470 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:58,471 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:58,471 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:58,489 | INFO     | [data] control thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:58,551 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:25:01] 2025-10-11 09:23:58,556 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:58,579 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:58,710 | INFO     | all job control threads have been joined
[2025-10-11 11:25:01] 2025-10-11 09:23:58,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:25:01] 2025-10-11 09:23:58,939 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:59,178 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:59,379 | INFO     | [payload] control thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:59,609 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:59,715 | INFO     | [job] control thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:59,916 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:23:59,917 | INFO     | [job] validate thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:24:00,760 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:24:02,557 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:24:08,086 | INFO     | job.realtimelogging is not enabled
[2025-10-11 11:25:01] 2025-10-11 09:24:09,091 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:25:01] 2025-10-11 09:24:28,311 | INFO     | PID=92591 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 11:25:01] 2025-10-11 09:24:28,311 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:25:01] 2025-10-11 09:24:28,311 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:25:01] 2025-10-11 09:24:28,311 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:25:01] 2025-10-11 09:24:49,886 [wrapper] supervise_pilot (15 min periods counter: 4)
[2025-10-11 11:25:01] 2025-10-11 09:24:55,650 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:25:01] 2025-10-11 09:24:56,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134562239514432)>', '<ExcThread(monitor, started 134561879004928)>']
[2025-10-11 11:25:01] 2025-10-11 09:24:57,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:25:01] 2025-10-11 09:24:57,452 | INFO     | [monitor] control thread has ended
[2025-10-11 11:25:01] 2025-10-11 09:25:01,680 | INFO     | all workflow threads have been joined
[2025-10-11 11:25:01] 2025-10-11 09:25:01,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:25:01] 2025-10-11 09:25:01,681 | INFO     | traces error code: 0
[2025-10-11 11:25:01] 2025-10-11 09:25:01,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:25:01] 2025-10-11 09:25:01,727 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:25:01] 2025-10-11 09:25:01,728 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:25:01] 2025-10-11 09:25:01,729 [wrapper] pilotpid: 92591
[2025-10-11 11:25:01] 2025-10-11 09:25:01,730 [wrapper] Pilot exit status: 0
[2025-10-11 11:25:01] 2025-10-11 09:25:01,733 [wrapper] pandaids: 6837630878
[2025-10-11 11:25:01] 2025-10-11 09:25:01,743 [wrapper] cleanup supervisor_pilot  118658 92592
[2025-10-11 11:25:01] 2025-10-11 09:25:01,744 [wrapper] Test setup, not cleaning
[2025-10-11 11:25:01] 2025-10-11 09:25:01,745 [wrapper] apfmon messages muted
[2025-10-11 11:25:01] 2025-10-11 09:25:01,746 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:25:01] 2025-10-11 09:25:01,747 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:25:01]  *** Error codes and diagnostics ***
[2025-10-11 11:25:01]     "exeErrorCode": 0,
[2025-10-11 11:25:01]     "exeErrorDiag": "",
[2025-10-11 11:25:01]     "pilotErrorCode": 0,
[2025-10-11 11:25:01]     "pilotErrorDiag": "",
[2025-10-11 11:25:01]  *** Listing of results directory ***
[2025-10-11 11:25:01] total 413936
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc    557409 Oct 10 15:43 pilot3.tar.gz
[2025-10-11 11:25:01] -rwx------ 1 boinc boinc     36292 Oct 10 15:57 runpilot2-wrapper.sh
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc      5112 Oct 10 15:57 queuedata.json
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc       100 Oct 11 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:25:01] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 10:39 run_atlas
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc       105 Oct 11 10:39 job.xml
[2025-10-11 11:25:01] -rw-r--r-- 2 boinc boinc 221496057 Oct 11 10:39 EVNT.46676267._001602.pool.root.1
[2025-10-11 11:25:01] drwxrwx--x 2 boinc boinc      4096 Oct 11 10:39 shared
[2025-10-11 11:25:01] -rw-r--r-- 2 boinc boinc    569680 Oct 11 10:39 input.tar.gz
[2025-10-11 11:25:01] -rw-r--r-- 2 boinc boinc     15120 Oct 11 10:39 start_atlas.sh
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc      6562 Oct 11 10:39 init_data.xml
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc         0 Oct 11 10:39 boinc_setup_complete
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc         0 Oct 11 10:39 boinc_lockfile
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc      2549 Oct 11 10:39 pandaJob.out
[2025-10-11 11:25:01] -rw------- 1 boinc boinc    975509 Oct 11 10:39 agis_schedconf.cvmfs.json
[2025-10-11 11:25:01] -rw------- 1 boinc boinc   1560580 Oct 11 10:39 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:25:01] drwx------ 5 boinc boinc      4096 Oct 11 10:39 pilot3
[2025-10-11 11:25:01] -rw------- 1 boinc boinc 196954712 Oct 11 11:23 HITS.46676269._039475.pool.root.1
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc       529 Oct 11 11:23 boinc_task_state.xml
[2025-10-11 11:25:01] -rw------- 1 boinc boinc      1028 Oct 11 11:23 memory_monitor_summary.json
[2025-10-11 11:25:01] -rw------- 1 boinc boinc    346991 Oct 11 11:23 log.46676269._039475.job.log.tgz.1
[2025-10-11 11:25:01] -rw------- 1 boinc boinc      7782 Oct 11 11:23 heartbeat.json
[2025-10-11 11:25:01] -rw------- 1 boinc boinc        95 Oct 11 11:24 pilot_heartbeat.json
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc      8192 Oct 11 11:24 boinc_mmap_file
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc        27 Oct 11 11:24 wrapper_checkpoint.txt
[2025-10-11 11:25:01] -rw------- 1 boinc boinc      4818 Oct 11 11:25 pilotlog.txt
[2025-10-11 11:25:01] -rw------- 1 boinc boinc    409482 Oct 11 11:25 log.46676269._039475.job.log.1
[2025-10-11 11:25:01] -rw------- 1 boinc boinc       357 Oct 11 11:25 output.list
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc       620 Oct 11 11:25 runtime_log
[2025-10-11 11:25:01] -rw------- 1 boinc boinc    778240 Oct 11 11:25 result.tar.gz
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc      8636 Oct 11 11:25 runtime_log.err
[2025-10-11 11:25:01] -rw------- 1 boinc boinc       638 Oct 11 11:25 PSrMDmDoSR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvUdNDms7hmlm.diag
[2025-10-11 11:25:01] -rw-r--r-- 1 boinc boinc     22556 Oct 11 11:25 stderr.txt
[2025-10-11 11:25:01] HITS file was successfully produced:
[2025-10-11 11:25:01] -rw------- 1 boinc boinc 196954712 Oct 11 11:23 shared/HITS.pool.root.1
[2025-10-11 11:25:01]  *** Contents of shared directory: ***
[2025-10-11 11:25:01] total 409992
[2025-10-11 11:25:01] -rw-r--r-- 2 boinc boinc 221496057 Oct 11 10:39 ATLAS.root_0
[2025-10-11 11:25:01] -rw-r--r-- 2 boinc boinc    569680 Oct 11 10:39 input.tar.gz
[2025-10-11 11:25:01] -rw-r--r-- 2 boinc boinc     15120 Oct 11 10:39 start_atlas.sh
[2025-10-11 11:25:01] -rw------- 1 boinc boinc 196954712 Oct 11 11:23 HITS.pool.root.1
[2025-10-11 11:25:01] -rw------- 1 boinc boinc    778240 Oct 11 11:25 result.tar.gz
11:25:03 (88864): run_atlas exited; CPU time 27708.476290
11:25:03 (88864): called boinc_finish(0)

</stderr_txt>
]]>

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