Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:31:39 (2798035): wrapper (7.7.26015): starting
19:31:39 (2798035): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 19:31:39] Arguments: --nthreads 8
[2025-10-10 19:31:39] Threads: 8
[2025-10-10 19:31:39] Checking for CVMFS
[2025-10-10 19:31:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 19:31:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 19:31:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 19:31:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 19:31:39] 2.13.2.0 159327 91114 364928 151565 0 196 31610750 39288833 5799 16776704 1 85598445 99.595 97189560 36061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 19:31:39] CVMFS is ok
[2025-10-10 19:31:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 19:31:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 19:31:39] Further information can be found at the LHC@home message board.
[2025-10-10 19:31:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 19:31:39] Checking for apptainer binary...
[2025-10-10 19:31:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 19:31:39] Running /usr/bin/apptainer --version
[2025-10-10 19:31:39] apptainer version 1.4.3-1.el9
[2025-10-10 19:31:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 19:31:39] c-210-30.aglt2.org
[2025-10-10 19:31:39] apptainer works
[2025-10-10 19:31:39] Set ATHENA_PROC_NUMBER=8
[2025-10-10 19:31:39] Set ATHENA_CORE_NUMBER=8
[2025-10-10 19:31:39] Starting ATLAS job with PandaID=6837358219
[2025-10-10 19:31:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 21:37:10]  *** The last 200 lines of the pilot log: ***
[2025-10-10 21:37:10] 2025-10-11 01:36:14,852 | INFO     | fitting pss+swap vs Time
[2025-10-10 21:37:10] 2025-10-11 01:36:14,852 | INFO     | sum of square deviations: 563026370.5
[2025-10-10 21:37:10] 2025-10-11 01:36:14,853 | INFO     | sum of deviations: 4629956425.000019
[2025-10-10 21:37:10] 2025-10-11 01:36:14,853 | INFO     | mean x: 1760142829.5
[2025-10-10 21:37:10] 2025-10-11 01:36:14,853 | INFO     | mean y: 2578155.295081967
[2025-10-10 21:37:10] 2025-10-11 01:36:14,853 | INFO     | -- intersect: -14471672127.376604
[2025-10-10 21:37:10] 2025-10-11 01:36:14,853 | INFO     | intersect: -14471672127.376604
[2025-10-10 21:37:10] 2025-10-11 01:36:14,854 | INFO     | chi2: 1.5891983934206866
[2025-10-10 21:37:10] 2025-10-11 01:36:14,854 | INFO     | sum of square deviations: 496597218.0
[2025-10-10 21:37:10] 2025-10-11 01:36:14,855 | INFO     | sum of deviations: 5014192374.999992
[2025-10-10 21:37:10] 2025-10-11 01:36:14,855 | INFO     | mean x: 1760142677.0
[2025-10-10 21:37:10] 2025-10-11 01:36:14,855 | INFO     | mean y: 2579037.871794872
[2025-10-10 21:37:10] 2025-10-11 01:36:14,855 | INFO     | -- intersect: -17769759730.89971
[2025-10-10 21:37:10] 2025-10-11 01:36:14,855 | INFO     | intersect: -17769759730.89971
[2025-10-10 21:37:10] 2025-10-11 01:36:14,855 | INFO     | chi2: 1.59180197963969
[2025-10-10 21:37:10] 2025-10-11 01:36:14,856 | INFO     | current chi2=1.59180197963969 (change=-0.16383015674961496 %)
[2025-10-10 21:37:10] 2025-10-11 01:36:14,856 | INFO     | right removable region: 116
[2025-10-10 21:37:10] 2025-10-11 01:36:14,856 | INFO     | sum of square deviations: 496597218.0
[2025-10-10 21:37:10] 2025-10-11 01:36:14,857 | INFO     | sum of deviations: -14872622645.999998
[2025-10-10 21:37:10] 2025-10-11 01:36:14,857 | INFO     | mean x: 1760142982.0
[2025-10-10 21:37:10] 2025-10-11 01:36:14,857 | INFO     | mean y: 2622153.188034188
[2025-10-10 21:37:10] 2025-10-11 01:36:14,857 | INFO     | -- intersect: 52717259741.61521
[2025-10-10 21:37:10] 2025-10-11 01:36:14,857 | INFO     | intersect: 52717259741.61521
[2025-10-10 21:37:10] 2025-10-11 01:36:14,857 | INFO     | chi2: 0.09206808209933681
[2025-10-10 21:37:10] 2025-10-11 01:36:14,858 | INFO     | current chi2=0.09206808209933681 (change=94.20663382995474 %)
[2025-10-10 21:37:10] 2025-10-11 01:36:14,858 | INFO     | sum of square deviations: 435610028.0
[2025-10-10 21:37:10] 2025-10-11 01:36:14,858 | INFO     | sum of deviations: -16000893194.500002
[2025-10-10 21:37:10] 2025-10-11 01:36:14,859 | INFO     | mean x: 1760143134.5
[2025-10-10 21:37:10] 2025-10-11 01:36:14,859 | INFO     | mean y: 2624825.2053571427
[2025-10-10 21:37:10] 2025-10-11 01:36:14,859 | INFO     | -- intersect: 64656467693.503494
[2025-10-10 21:37:10] 2025-10-11 01:36:14,859 | INFO     | intersect: 64656467693.503494
[2025-10-10 21:37:10] 2025-10-11 01:36:14,859 | INFO     | chi2: 0.053898836814942924
[2025-10-10 21:37:10] 2025-10-11 01:36:14,859 | INFO     | current chi2=0.053898836814942924 (change=41.45763049914649 %)
[2025-10-10 21:37:10] 2025-10-11 01:36:14,860 | INFO     | sum of square deviations: 379832238.0
[2025-10-10 21:37:10] 2025-10-11 01:36:14,860 | INFO     | sum of deviations: -14124615026.0
[2025-10-10 21:37:10] 2025-10-11 01:36:14,860 | INFO     | mean x: 1760143287.0
[2025-10-10 21:37:10] 2025-10-11 01:36:14,861 | INFO     | mean y: 2619675.2429906544
[2025-10-10 21:37:10] 2025-10-11 01:36:14,861 | INFO     | -- intersect: 65456111591.5169
[2025-10-10 21:37:10] 2025-10-11 01:36:14,861 | INFO     | intersect: 65456111591.5169
[2025-10-10 21:37:10] 2025-10-11 01:36:14,861 | INFO     | chi2: 0.05363390243734923
[2025-10-10 21:37:10] 2025-10-11 01:36:14,861 | INFO     | current chi2=0.05363390243734923 (change=0.4915400651470893 %)
[2025-10-10 21:37:10] 2025-10-11 01:36:14,861 | INFO     | left removable region: 30
[2025-10-10 21:37:10] 2025-10-11 01:36:14,862 | INFO     | sum of square deviations: 197203697.5
[2025-10-10 21:37:10] 2025-10-11 01:36:14,862 | INFO     | sum of deviations: -6331749797.0
[2025-10-10 21:37:10] 2025-10-11 01:36:14,862 | INFO     | mean x: 1760143561.5
[2025-10-10 21:37:10] 2025-10-11 01:36:14,862 | INFO     | mean y: 2598497.2325581396
[2025-10-10 21:37:10] 2025-10-11 01:36:14,862 | INFO     | -- intersect: 56516694224.15716
[2025-10-10 21:37:10] 2025-10-11 01:36:14,862 | INFO     | intersect: 56516694224.15716
[2025-10-10 21:37:10] 2025-10-11 01:36:14,863 | INFO     | chi2: 0.04518541730165795
[2025-10-10 21:37:10] 2025-10-11 01:36:14,863 | INFO     | -- intersect: 56516694224.15716
[2025-10-10 21:37:10] 2025-10-11 01:36:14,863 | INFO     | current memory leak: -32.11 B/s (using 86 data points, chi2=0.05)
[2025-10-10 21:37:10] 2025-10-11 01:36:14,864 | INFO     | could have reported an average CPU frequency of 2607 MHz (8 samples)
[2025-10-10 21:37:10] 2025-10-11 01:36:14,864 | INFO     | ..............................
[2025-10-10 21:37:10] 2025-10-11 01:36:14,864 | INFO     | . Timing measurements:
[2025-10-10 21:37:10] 2025-10-11 01:36:14,864 | INFO     | . get job = 0 s
[2025-10-10 21:37:10] 2025-10-11 01:36:14,864 | INFO     | . initial setup = 2 s
[2025-10-10 21:37:10] 2025-10-11 01:36:14,864 | INFO     | . payload setup = 6 s
[2025-10-10 21:37:10] 2025-10-11 01:36:14,864 | INFO     | . stage-in = 0 s
[2025-10-10 21:37:10] 2025-10-11 01:36:14,864 | INFO     | . payload execution = 7429 s
[2025-10-10 21:37:10] 2025-10-11 01:36:14,865 | INFO     | . stage-out = 0 s
[2025-10-10 21:37:10] 2025-10-11 01:36:14,865 | INFO     | . log creation = 0 s
[2025-10-10 21:37:10] 2025-10-11 01:36:14,865 | INFO     | ..............................
[2025-10-10 21:37:10] 2025-10-11 01:36:15,197 | INFO     | 
[2025-10-10 21:37:10] 2025-10-11 01:36:15,198 | INFO     | job summary report
[2025-10-10 21:37:10] 2025-10-11 01:36:15,198 | INFO     | --------------------------------------------------
[2025-10-10 21:37:10] 2025-10-11 01:36:15,198 | INFO     | PanDA job id: 6837358219
[2025-10-10 21:37:10] 2025-10-11 01:36:15,198 | INFO     | task id: 46676269
[2025-10-10 21:37:10] 2025-10-11 01:36:15,198 | INFO     | errors: (none)
[2025-10-10 21:37:10] 2025-10-11 01:36:15,198 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 21:37:10] 2025-10-11 01:36:15,198 | INFO     | pilot state: finished 
[2025-10-10 21:37:10] 2025-10-11 01:36:15,198 | INFO     | transexitcode: 0
[2025-10-10 21:37:10] 2025-10-11 01:36:15,198 | INFO     | exeerrorcode: 0
[2025-10-10 21:37:10] 2025-10-11 01:36:15,199 | INFO     | exeerrordiag: 
[2025-10-10 21:37:10] 2025-10-11 01:36:15,199 | INFO     | exitcode: 0
[2025-10-10 21:37:10] 2025-10-11 01:36:15,199 | INFO     | exitmsg: OK
[2025-10-10 21:37:10] 2025-10-11 01:36:15,199 | INFO     | cpuconsumptiontime: 51413 s
[2025-10-10 21:37:10] 2025-10-11 01:36:15,199 | INFO     | nevents: 400
[2025-10-10 21:37:10] 2025-10-11 01:36:15,199 | INFO     | neventsw: 0
[2025-10-10 21:37:10] 2025-10-11 01:36:15,199 | INFO     | pid: 2808498
[2025-10-10 21:37:10] 2025-10-11 01:36:15,199 | INFO     | pgrp: 2808498
[2025-10-10 21:37:10] 2025-10-11 01:36:15,199 | INFO     | corecount: 8
[2025-10-10 21:37:10] 2025-10-11 01:36:15,199 | INFO     | event service: False
[2025-10-10 21:37:10] 2025-10-11 01:36:15,200 | INFO     | sizes: {0: 2348853, 1: 2348853, 5: 2349143, 11: 2349199, 7439: 2385639, 7440: 2385639, 7447: 2385961}
[2025-10-10 21:37:10] 2025-10-11 01:36:15,200 | INFO     | --------------------------------------------------
[2025-10-10 21:37:10] 2025-10-11 01:36:15,200 | INFO     | 
[2025-10-10 21:37:10] 2025-10-11 01:36:15,200 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 21:37:10] 2025-10-11 01:36:15,221 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,223 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,223 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 21:37:10] 2025-10-11 01:36:15,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,224 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 21:37:10] 2025-10-11 01:36:15,224 | INFO     | job 6837358219 has completed (purged errors)
[2025-10-10 21:37:10] 2025-10-11 01:36:15,224 | INFO     | overall cleanup function is called
[2025-10-10 21:37:10] 2025-10-11 01:36:16,232 | INFO     | --- collectZombieJob: --- 10, [2808498]
[2025-10-10 21:37:10] 2025-10-11 01:36:16,232 | INFO     | zombie collector waiting for pid 2808498
[2025-10-10 21:37:10] 2025-10-11 01:36:16,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 21:37:10] 2025-10-11 01:36:16,233 | INFO     | collected zombie processes
[2025-10-10 21:37:10] 2025-10-11 01:36:16,233 | INFO     | will attempt to kill all subprocesses of pid=2808498
[2025-10-10 21:37:10] 2025-10-11 01:36:16,459 | INFO     | process IDs to be killed: [2808498] (in reverse order)
[2025-10-10 21:37:10] 2025-10-11 01:36:16,535 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 21:37:10] 2025-10-11 01:36:16,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 21:37:10] 2025-10-11 01:36:16,545 | INFO     | did not find any defunct processes belonging to 2808498
[2025-10-10 21:37:10] 2025-10-11 01:36:16,553 | INFO     | did not find any defunct processes belonging to 2808498
[2025-10-10 21:37:10] 2025-10-11 01:36:16,554 | INFO     | ready for new job
[2025-10-10 21:37:10] 2025-10-11 01:36:16,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 21:37:10] 2025-10-11 01:36:16,556 | INFO     | ***************************************
[2025-10-10 21:37:10] 2025-10-11 01:36:16,556 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 21:37:10] 2025-10-11 01:36:16,556 | INFO     | ***************************************
[2025-10-10 21:37:10] 2025-10-11 01:36:16,556 | INFO     | 
[2025-10-10 21:37:10] 2025-10-11 01:36:16,558 | INFO     | architecture information:
[2025-10-10 21:37:10] 2025-10-11 01:36:16,559 | INFO     | executing command: cat /etc/os-release
[2025-10-10 21:37:10] 2025-10-11 01:36:16,575 | INFO     | cat /etc/os-release:
[2025-10-10 21:37:10] NAME="CentOS Linux"
[2025-10-10 21:37:10] VERSION="7 (Core)"
[2025-10-10 21:37:10] ID="centos"
[2025-10-10 21:37:10] ID_LIKE="rhel fedora"
[2025-10-10 21:37:10] VERSION_ID="7"
[2025-10-10 21:37:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 21:37:10] ANSI_COLOR="0;31"
[2025-10-10 21:37:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 21:37:10] HOME_URL="https://www.centos.org/"
[2025-10-10 21:37:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 21:37:10] 
[2025-10-10 21:37:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 21:37:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 21:37:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 21:37:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 21:37:10] 
[2025-10-10 21:37:10] 2025-10-11 01:36:16,575 | INFO     | ***************************************
[2025-10-10 21:37:10] 2025-10-11 01:36:17,078 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 21:37:10] 2025-10-11 01:36:17,097 | INFO     | sufficient remaining disk space (52204404736 B)
[2025-10-10 21:37:10] 2025-10-11 01:36:17,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 21:37:10] 2025-10-11 01:36:17,097 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 21:37:10] 2025-10-11 01:36:17,097 | INFO     | update_server=False
[2025-10-10 21:37:10] 2025-10-11 01:36:17,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 21:37:10] 2025-10-11 01:36:17,125 | INFO     | all data control threads have been joined
[2025-10-10 21:37:10] 2025-10-11 01:36:17,510 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 21:37:10] 2025-10-11 01:36:17,511 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 21:37:10] 2025-10-11 01:36:17,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:37:10] 2025-10-11 01:36:17,511 | INFO     | will abort loop
[2025-10-10 21:37:10] 2025-10-11 01:36:17,690 | INFO     | all payload control threads have been joined
[2025-10-10 21:37:10] 2025-10-11 01:36:18,100 | INFO     | [job] retrieve thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:18,131 | INFO     | [data] control thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:18,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 21:37:10] 2025-10-11 01:36:18,247 | INFO     | [job] validate thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:18,282 | INFO     | [data] copytool_in thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:18,289 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:18,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 21:37:10] 2025-10-11 01:36:18,483 | INFO     | all job control threads have been joined
[2025-10-10 21:37:10] 2025-10-11 01:36:18,511 | INFO     | [job] job monitor thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:18,695 | INFO     | [payload] control thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:18,883 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:19,026 | INFO     | [payload] failed_post thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:19,100 | INFO     | [payload] validate_post thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:19,195 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:19,488 | INFO     | [job] control thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:19,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:37:10] 2025-10-11 01:36:20,198 | INFO     | [data] copytool_out thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:20,997 | INFO     | [job] queue monitor thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:22,309 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:27,925 | INFO     | job.realtimelogging is not enabled
[2025-10-10 21:37:10] 2025-10-11 01:36:28,926 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 21:37:10] 2025-10-11 01:36:48,186 | INFO     | PID=2801811 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 21:37:10] 2025-10-11 01:36:48,187 | INFO     | .. there are 7 such processes running
[2025-10-10 21:37:10] 2025-10-11 01:36:48,188 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 21:37:10] 2025-10-11 01:36:48,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 21:37:10] 2025-10-11 01:36:48,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 21:37:10] 2025-10-11 01:37:03,860 | INFO     | [monitor] cgroup control has ended
[2025-10-10 21:37:10] 2025-10-11 01:37:04,866 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139951429879616)>', '<ExcThread(monitor, started 139951056328448)>']
[2025-10-10 21:37:10] 2025-10-11 01:37:05,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 21:37:10] 2025-10-11 01:37:05,270 | INFO     | [monitor] control thread has ended
[2025-10-10 21:37:10] 2025-10-11 01:37:09,891 | INFO     | all workflow threads have been joined
[2025-10-10 21:37:10] 2025-10-11 01:37:09,892 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 21:37:10] 2025-10-11 01:37:09,892 | INFO     | traces error code: 0
[2025-10-10 21:37:10] 2025-10-11 01:37:09,893 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 21:37:10] 2025-10-11 01:37:10,063 [wrapper] ==== pilot stdout END ====
[2025-10-10 21:37:10] 2025-10-11 01:37:10,066 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 21:37:10] 2025-10-11 01:37:10,069 [wrapper] pilotpid: 2801811
[2025-10-10 21:37:10] 2025-10-11 01:37:10,072 [wrapper] Pilot exit status: 0
[2025-10-10 21:37:10] 2025-10-11 01:37:10,085 [wrapper] pandaids: 6837358219
[2025-10-10 21:37:10] 2025-10-11 01:37:10,134 [wrapper] cleanup supervisor_pilot 2970443 2801812
[2025-10-10 21:37:10] 2025-10-11 01:37:10,137 [wrapper] Test setup, not cleaning
[2025-10-10 21:37:10] 2025-10-11 01:37:10,140 [wrapper] apfmon messages muted
[2025-10-10 21:37:10] 2025-10-11 01:37:10,144 [wrapper] ==== wrapper stdout END ====
[2025-10-10 21:37:10] 2025-10-11 01:37:10,148 [wrapper] ==== wrapper stderr END ====
[2025-10-10 21:37:10]  *** Error codes and diagnostics ***
[2025-10-10 21:37:10]     "exeErrorCode": 0,
[2025-10-10 21:37:10]     "exeErrorDiag": "",
[2025-10-10 21:37:10]     "pilotErrorCode": 0,
[2025-10-10 21:37:10]     "pilotErrorDiag": "",
[2025-10-10 21:37:10]  *** Listing of results directory ***
[2025-10-10 21:37:10] total 418796
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 14:06 pilot3.tar.gz
[2025-10-10 21:37:10] -rwx------. 1 boincer umatlas     36292 Oct  9 14:27 runpilot2-wrapper.sh
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 14:27 queuedata.json
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas       100 Oct 10 19:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 21:37:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 19:31 run_atlas
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas       105 Oct 10 19:31 job.xml
[2025-10-10 21:37:10] -rw-r--r--. 2 boincer umatlas 222461043 Oct 10 19:31 EVNT.46676267._000992.pool.root.1
[2025-10-10 21:37:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 19:31 start_atlas.sh
[2025-10-10 21:37:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 19:31 shared
[2025-10-10 21:37:10] -rw-r--r--. 2 boincer umatlas    569672 Oct 10 19:31 input.tar.gz
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas         0 Oct 10 19:31 boinc_lockfile
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas      2548 Oct 10 19:31 pandaJob.out
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas    975525 Oct 10 19:31 agis_schedconf.cvmfs.json
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas   1560580 Oct 10 19:31 agis_ddmendpoints.agis.ALL.json
[2025-10-10 21:37:10] drwx------. 5 boincer umatlas      4096 Oct 10 19:31 pilot3
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas      6658 Oct 10 21:30 init_data.xml
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas 199638477 Oct 10 21:35 HITS.46676269._024181.pool.root.1
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas       529 Oct 10 21:35 boinc_task_state.xml
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas      1034 Oct 10 21:36 memory_monitor_summary.json
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas    356055 Oct 10 21:36 log.46676269._024181.job.log.tgz.1
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas      7816 Oct 10 21:36 heartbeat.json
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas        95 Oct 10 21:36 pilot_heartbeat.json
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas        27 Oct 10 21:37 wrapper_checkpoint.txt
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 21:37 boinc_mmap_file
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas      5081 Oct 10 21:37 pilotlog.txt
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas   1069011 Oct 10 21:37 log.46676269._024181.job.log.1
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas       357 Oct 10 21:37 output.list
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas       620 Oct 10 21:37 runtime_log
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas   1443840 Oct 10 21:37 result.tar.gz
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas      8703 Oct 10 21:37 runtime_log.err
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas       652 Oct 10 21:37 fZ2KDmuXAR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmDWOMDmKvlKcm.diag
[2025-10-10 21:37:10] -rw-r--r--. 1 boincer umatlas     20906 Oct 10 21:37 stderr.txt
[2025-10-10 21:37:10] HITS file was successfully produced:
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas 199638477 Oct 10 21:35 shared/HITS.pool.root.1
[2025-10-10 21:37:10]  *** Contents of shared directory: ***
[2025-10-10 21:37:10] total 414200
[2025-10-10 21:37:10] -rw-r--r--. 2 boincer umatlas 222461043 Oct 10 19:31 ATLAS.root_0
[2025-10-10 21:37:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 19:31 start_atlas.sh
[2025-10-10 21:37:10] -rw-r--r--. 2 boincer umatlas    569672 Oct 10 19:31 input.tar.gz
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas 199638477 Oct 10 21:35 HITS.pool.root.1
[2025-10-10 21:37:10] -rw-------. 1 boincer umatlas   1443840 Oct 10 21:37 result.tar.gz
21:37:32 (2798035): run_atlas exited; CPU time 51503.229100
21:37:32 (2798035): called boinc_finish(0)

</stderr_txt>
]]>

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