Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:16:00 (1104906): wrapper (7.7.26015): starting
18:16:00 (1104906): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 18:16:00] Arguments: --nthreads 10
[2025-10-10 18:16:00] Threads: 10
[2025-10-10 18:16:00] Checking for CVMFS
[2025-10-10 18:16:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 18:16:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 18:16:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 18:16:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 18:16:23] 2.13.2.0 129071 115287 188584 151564 1 64 34444130 39288833 8809 16776704 1 70398701 99.737 39096261 31549 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 18:16:23] CVMFS is ok
[2025-10-10 18:16:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 18:16:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 18:16:23] Further information can be found at the LHC@home message board.
[2025-10-10 18:16:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 18:16:23] Checking for apptainer binary...
[2025-10-10 18:16:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 18:16:23] Running /usr/bin/apptainer --version
[2025-10-10 18:16:24] apptainer version 1.4.3-1.el9
[2025-10-10 18:16:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 18:16:24] c-210-3.aglt2.org
[2025-10-10 18:16:24] apptainer works
[2025-10-10 18:16:24] Set ATHENA_PROC_NUMBER=10
[2025-10-10 18:16:24] Set ATHENA_CORE_NUMBER=10
[2025-10-10 18:16:24] Starting ATLAS job with PandaID=6837729979
[2025-10-10 18:16:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 23:36:58]  *** The last 200 lines of the pilot log: ***
[2025-10-10 23:36:58] 2025-10-11 03:36:18,397 | INFO     | maximum number of monitored processes: 6
[2025-10-10 23:36:58] 2025-10-11 03:36:18,984 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 23:36:58] 2025-10-11 03:36:18,990 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2620.1886499999996
[2025-10-10 23:36:58] 2025-10-11 03:36:18,996 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837729979/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 23:36:58] 2025-10-11 03:36:18,997 | INFO     | extracted standard info from prmon json
[2025-10-10 23:36:58] 2025-10-11 03:36:18,997 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 23:36:58] 2025-10-11 03:36:18,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 23:36:58] 2025-10-11 03:36:18,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 23:36:58] 2025-10-11 03:36:18,998 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 23:36:58] 2025-10-11 03:36:19,004 | INFO     | fitting pss+swap vs Time
[2025-10-10 23:36:58] 2025-10-11 03:36:19,005 | INFO     | sum of square deviations: 9508470811.546316
[2025-10-10 23:36:58] 2025-10-11 03:36:19,007 | INFO     | sum of deviations: -76801567567.82745
[2025-10-10 23:36:58] 2025-10-11 03:36:19,008 | INFO     | mean x: 1760144249.7571886
[2025-10-10 23:36:58] 2025-10-11 03:36:19,008 | INFO     | mean y: 2621068.9233226837
[2025-10-10 23:36:58] 2025-10-11 03:36:19,008 | INFO     | -- intersect: 14219611393.245064
[2025-10-10 23:36:58] 2025-10-11 03:36:19,008 | INFO     | intersect: 14219611393.245064
[2025-10-10 23:36:58] 2025-10-11 03:36:19,009 | INFO     | chi2: 3.386523174924035
[2025-10-10 23:36:58] 2025-10-11 03:36:19,009 | INFO     | sum of square deviations: 9060069441.69804
[2025-10-10 23:36:58] 2025-10-11 03:36:19,012 | INFO     | sum of deviations: -55562785909.25325
[2025-10-10 23:36:58] 2025-10-11 03:36:19,012 | INFO     | mean x: 1760144097.262987
[2025-10-10 23:36:58] 2025-10-11 03:36:19,012 | INFO     | mean y: 2628203.188311688
[2025-10-10 23:36:58] 2025-10-11 03:36:19,013 | INFO     | -- intersect: 10797082955.99093
[2025-10-10 23:36:58] 2025-10-11 03:36:19,013 | INFO     | intersect: 10797082955.99093
[2025-10-10 23:36:58] 2025-10-11 03:36:19,013 | INFO     | chi2: 2.7122757927455416
[2025-10-10 23:36:58] 2025-10-11 03:36:19,013 | INFO     | current chi2=2.7122757927455416 (change=19.909722962212356 %)
[2025-10-10 23:36:58] 2025-10-11 03:36:19,013 | INFO     | right removable region: 307
[2025-10-10 23:36:58] 2025-10-11 03:36:19,014 | INFO     | sum of square deviations: 9059866730.857166
[2025-10-10 23:36:58] 2025-10-11 03:36:19,017 | INFO     | sum of deviations: -146106803676.1428
[2025-10-10 23:36:58] 2025-10-11 03:36:19,017 | INFO     | mean x: 1760144402.2857144
[2025-10-10 23:36:58] 2025-10-11 03:36:19,017 | INFO     | mean y: 2644522.603896104
[2025-10-10 23:36:58] 2025-10-11 03:36:19,017 | INFO     | -- intersect: 28388169416.753136
[2025-10-10 23:36:58] 2025-10-11 03:36:19,017 | INFO     | intersect: 28388169416.753136
[2025-10-10 23:36:58] 2025-10-11 03:36:19,018 | INFO     | chi2: 1.2737833470861957
[2025-10-10 23:36:58] 2025-10-11 03:36:19,018 | INFO     | current chi2=1.2737833470861957 (change=62.38669333438804 %)
[2025-10-10 23:36:58] 2025-10-11 03:36:19,018 | INFO     | sum of square deviations: 8625607168.277224
[2025-10-10 23:36:58] 2025-10-11 03:36:19,021 | INFO     | sum of deviations: -151502995742.6831
[2025-10-10 23:36:58] 2025-10-11 03:36:19,021 | INFO     | mean x: 1760144554.8118813
[2025-10-10 23:36:58] 2025-10-11 03:36:19,021 | INFO     | mean y: 2646387.689768977
[2025-10-10 23:36:58] 2025-10-11 03:36:19,022 | INFO     | -- intersect: 30918403132.89664
[2025-10-10 23:36:58] 2025-10-11 03:36:19,022 | INFO     | intersect: 30918403132.89664
[2025-10-10 23:36:58] 2025-10-11 03:36:19,022 | INFO     | chi2: 1.200764535121221
[2025-10-10 23:36:58] 2025-10-11 03:36:19,022 | INFO     | current chi2=1.200764535121221 (change=5.732435749926122 %)
[2025-10-10 23:36:58] 2025-10-11 03:36:19,022 | INFO     | left removable region: 20
[2025-10-10 23:36:58] 2025-10-11 03:36:19,023 | INFO     | sum of square deviations: 7330137697.679441
[2025-10-10 23:36:58] 2025-10-11 03:36:19,025 | INFO     | sum of deviations: -102064332355.50522
[2025-10-10 23:36:58] 2025-10-11 03:36:19,025 | INFO     | mean x: 1760144676.8013937
[2025-10-10 23:36:58] 2025-10-11 03:36:19,026 | INFO     | mean y: 2643876.763066202
[2025-10-10 23:36:58] 2025-10-11 03:36:19,026 | INFO     | -- intersect: 24510777106.470787
[2025-10-10 23:36:58] 2025-10-11 03:36:19,026 | INFO     | intersect: 24510777106.470787
[2025-10-10 23:36:58] 2025-10-11 03:36:19,026 | INFO     | chi2: 0.46441840285325453
[2025-10-10 23:36:58] 2025-10-11 03:36:19,027 | INFO     | -- intersect: 24510777106.470787
[2025-10-10 23:36:58] 2025-10-11 03:36:19,027 | INFO     | current memory leak: -13.92 B/s (using 287 data points, chi2=0.46)
[2025-10-10 23:36:58] 2025-10-11 03:36:19,027 | INFO     | could have reported an average CPU frequency of 2601 MHz (14 samples)
[2025-10-10 23:36:58] 2025-10-11 03:36:19,028 | INFO     | ..............................
[2025-10-10 23:36:58] 2025-10-11 03:36:19,028 | INFO     | . Timing measurements:
[2025-10-10 23:36:58] 2025-10-11 03:36:19,028 | INFO     | . get job = 0 s
[2025-10-10 23:36:58] 2025-10-11 03:36:19,028 | INFO     | . initial setup = 4 s
[2025-10-10 23:36:58] 2025-10-11 03:36:19,028 | INFO     | . payload setup = 28 s
[2025-10-10 23:36:58] 2025-10-11 03:36:19,028 | INFO     | . stage-in = 0 s
[2025-10-10 23:36:58] 2025-10-11 03:36:19,028 | INFO     | . payload execution = 19056 s
[2025-10-10 23:36:58] 2025-10-11 03:36:19,028 | INFO     | . stage-out = 2 s
[2025-10-10 23:36:58] 2025-10-11 03:36:19,028 | INFO     | . log creation = 0 s
[2025-10-10 23:36:58] 2025-10-11 03:36:19,028 | INFO     | ..............................
[2025-10-10 23:36:58] 2025-10-11 03:36:19,330 | INFO     | time since job start (19142s) is within the limit (172800.0s)
[2025-10-10 23:36:58] 2025-10-11 03:36:19,377 | INFO     | 
[2025-10-10 23:36:58] 2025-10-11 03:36:19,377 | INFO     | job summary report
[2025-10-10 23:36:58] 2025-10-11 03:36:19,377 | INFO     | --------------------------------------------------
[2025-10-10 23:36:58] 2025-10-11 03:36:19,377 | INFO     | PanDA job id: 6837729979
[2025-10-10 23:36:58] 2025-10-11 03:36:19,377 | INFO     | task id: 46676269
[2025-10-10 23:36:58] 2025-10-11 03:36:19,377 | INFO     | errors: (none)
[2025-10-10 23:36:58] 2025-10-11 03:36:19,377 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 23:36:58] 2025-10-11 03:36:19,378 | INFO     | pilot state: finished 
[2025-10-10 23:36:58] 2025-10-11 03:36:19,378 | INFO     | transexitcode: 0
[2025-10-10 23:36:58] 2025-10-11 03:36:19,378 | INFO     | exeerrorcode: 0
[2025-10-10 23:36:58] 2025-10-11 03:36:19,378 | INFO     | exeerrordiag: 
[2025-10-10 23:36:58] 2025-10-11 03:36:19,378 | INFO     | exitcode: 0
[2025-10-10 23:36:58] 2025-10-11 03:36:19,378 | INFO     | exitmsg: OK
[2025-10-10 23:36:58] 2025-10-11 03:36:19,378 | INFO     | cpuconsumptiontime: 49974 s
[2025-10-10 23:36:58] 2025-10-11 03:36:19,378 | INFO     | nevents: 400
[2025-10-10 23:36:58] 2025-10-11 03:36:19,378 | INFO     | neventsw: 0
[2025-10-10 23:36:58] 2025-10-11 03:36:19,378 | INFO     | pid: 1117091
[2025-10-10 23:36:58] 2025-10-11 03:36:19,379 | INFO     | pgrp: 1117091
[2025-10-10 23:36:58] 2025-10-11 03:36:19,379 | INFO     | corecount: 10
[2025-10-10 23:36:58] 2025-10-11 03:36:19,379 | INFO     | event service: False
[2025-10-10 23:36:58] 2025-10-11 03:36:19,379 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 21: 2349175, 23: 2349203, 19088: 2382336, 19090: 2391390, 19096: 2391528}
[2025-10-10 23:36:58] 2025-10-11 03:36:19,379 | INFO     | --------------------------------------------------
[2025-10-10 23:36:58] 2025-10-11 03:36:19,379 | INFO     | 
[2025-10-10 23:36:58] 2025-10-11 03:36:19,379 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 23:36:58] 2025-10-11 03:36:19,400 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,400 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,400 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,400 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,400 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,401 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,401 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,401 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,401 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,401 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,401 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,401 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,401 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,402 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,402 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,402 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,402 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 23:36:58] 2025-10-11 03:36:19,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,402 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 23:36:58] 2025-10-11 03:36:19,402 | INFO     | job 6837729979 has completed (purged errors)
[2025-10-10 23:36:58] 2025-10-11 03:36:19,402 | INFO     | overall cleanup function is called
[2025-10-10 23:36:58] 2025-10-11 03:36:20,410 | INFO     | --- collectZombieJob: --- 10, [1117091]
[2025-10-10 23:36:58] 2025-10-11 03:36:20,411 | INFO     | zombie collector waiting for pid 1117091
[2025-10-10 23:36:58] 2025-10-11 03:36:20,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 23:36:58] 2025-10-11 03:36:20,411 | INFO     | collected zombie processes
[2025-10-10 23:36:58] 2025-10-11 03:36:20,411 | INFO     | will attempt to kill all subprocesses of pid=1117091
[2025-10-10 23:36:58] 2025-10-11 03:36:20,931 | INFO     | PID=1109035 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-10 23:36:58] 2025-10-11 03:36:20,932 | INFO     | .. there are 6 such processes running
[2025-10-10 23:36:58] 2025-10-11 03:36:20,935 | INFO     | process IDs to be killed: [1117091] (in reverse order)
[2025-10-10 23:36:58] 2025-10-11 03:36:21,007 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 23:36:58] 2025-10-11 03:36:21,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 23:36:58] 2025-10-11 03:36:21,015 | INFO     | did not find any defunct processes belonging to 1117091
[2025-10-10 23:36:58] 2025-10-11 03:36:21,022 | INFO     | did not find any defunct processes belonging to 1117091
[2025-10-10 23:36:58] 2025-10-11 03:36:21,023 | INFO     | ready for new job
[2025-10-10 23:36:58] 2025-10-11 03:36:21,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 23:36:58] 2025-10-11 03:36:21,025 | INFO     | ***************************************
[2025-10-10 23:36:58] 2025-10-11 03:36:21,026 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 23:36:58] 2025-10-11 03:36:21,026 | INFO     | ***************************************
[2025-10-10 23:36:58] 2025-10-11 03:36:21,026 | INFO     | 
[2025-10-10 23:36:58] 2025-10-11 03:36:21,028 | INFO     | architecture information:
[2025-10-10 23:36:58] 2025-10-11 03:36:21,028 | INFO     | executing command: cat /etc/os-release
[2025-10-10 23:36:58] 2025-10-11 03:36:21,044 | INFO     | cat /etc/os-release:
[2025-10-10 23:36:58] NAME="CentOS Linux"
[2025-10-10 23:36:58] VERSION="7 (Core)"
[2025-10-10 23:36:58] ID="centos"
[2025-10-10 23:36:58] ID_LIKE="rhel fedora"
[2025-10-10 23:36:58] VERSION_ID="7"
[2025-10-10 23:36:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 23:36:58] ANSI_COLOR="0;31"
[2025-10-10 23:36:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 23:36:58] HOME_URL="https://www.centos.org/"
[2025-10-10 23:36:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 23:36:58] 
[2025-10-10 23:36:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 23:36:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 23:36:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 23:36:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 23:36:58] 
[2025-10-10 23:36:58] 2025-10-11 03:36:21,045 | INFO     | ***************************************
[2025-10-10 23:36:58] 2025-10-11 03:36:21,548 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 23:36:58] 2025-10-11 03:36:21,565 | INFO     | sufficient remaining disk space (53198454784 B)
[2025-10-10 23:36:58] 2025-10-11 03:36:21,565 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 23:36:58] 2025-10-11 03:36:21,566 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 23:36:58] 2025-10-11 03:36:21,566 | INFO     | update_server=False
[2025-10-10 23:36:58] 2025-10-11 03:36:21,566 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 23:36:58] 2025-10-11 03:36:21,566 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-10 23:36:58] 2025-10-11 03:36:21,566 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 23:36:58] 2025-10-11 03:36:21,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 23:36:58] 2025-10-11 03:36:21,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 23:36:58] 2025-10-11 03:36:21,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 23:36:58] 2025-10-11 03:36:21,905 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:36:58] 2025-10-11 03:36:21,906 | INFO     | aborting loop
[2025-10-10 23:36:58] 2025-10-11 03:36:21,947 | INFO     | all payload control threads have been joined
[2025-10-10 23:36:58] 2025-10-11 03:36:22,233 | INFO     | all data control threads have been joined
[2025-10-10 23:36:58] 2025-10-11 03:36:22,445 | INFO     | all job control threads have been joined
[2025-10-10 23:36:58] 2025-10-11 03:36:22,567 | INFO     | [job] retrieve thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:22,807 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:22,901 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:22,906 | INFO     | [job] job monitor thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:22,953 | INFO     | [payload] control thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:23,239 | INFO     | [data] control thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:23,450 | INFO     | [job] control thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:23,524 | INFO     | [payload] validate_post thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:23,524 | INFO     | [job] validate thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:23,612 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:23,645 | INFO     | [data] copytool_out thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:23,752 | INFO     | [data] copytool_in thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:23,822 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:24,017 | INFO     | [payload] failed_post thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:24,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 23:36:58] 2025-10-11 03:36:24,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 23:36:58] 2025-10-11 03:36:25,150 | INFO     | [job] queue monitor thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:28,253 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 23:36:58] 2025-10-11 03:36:52,868 | INFO     | [monitor] cgroup control has ended
[2025-10-10 23:36:58] 2025-10-11 03:36:53,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139922339780416)>', '<ExcThread(monitor, started 139921696216832)>']
[2025-10-10 23:36:58] 2025-10-11 03:36:53,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 23:36:58] 2025-10-11 03:36:53,699 | INFO     | [monitor] control thread has ended
[2025-10-10 23:36:58] 2025-10-11 03:36:58,115 | INFO     | all workflow threads have been joined
[2025-10-10 23:36:58] 2025-10-11 03:36:58,116 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 23:36:58] 2025-10-11 03:36:58,117 | INFO     | traces error code: 0
[2025-10-10 23:36:58] 2025-10-11 03:36:58,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 23:36:58] 2025-10-11 03:36:58,321 [wrapper] ==== pilot stdout END ====
[2025-10-10 23:36:58] 2025-10-11 03:36:58,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 23:36:58] 2025-10-11 03:36:58,328 [wrapper] pilotpid: 1109035
[2025-10-10 23:36:58] 2025-10-11 03:36:58,331 [wrapper] Pilot exit status: 0
[2025-10-10 23:36:58] 2025-10-11 03:36:58,345 [wrapper] pandaids: 6837729979
[2025-10-10 23:36:58] 2025-10-11 03:36:58,408 [wrapper] cleanup supervisor_pilot 1537059 1109037
[2025-10-10 23:36:58] 2025-10-11 03:36:58,413 [wrapper] Test setup, not cleaning
[2025-10-10 23:36:58] 2025-10-11 03:36:58,417 [wrapper] apfmon messages muted
[2025-10-10 23:36:58] 2025-10-11 03:36:58,420 [wrapper] ==== wrapper stdout END ====
[2025-10-10 23:36:58] 2025-10-11 03:36:58,425 [wrapper] ==== wrapper stderr END ====
[2025-10-10 23:36:58]  *** Error codes and diagnostics ***
[2025-10-10 23:36:58]     "exeErrorCode": 0,
[2025-10-10 23:36:58]     "exeErrorDiag": "",
[2025-10-10 23:36:58]     "pilotErrorCode": 0,
[2025-10-10 23:36:58]     "pilotErrorDiag": "",
[2025-10-10 23:36:58]  *** Listing of results directory ***
[2025-10-10 23:36:58] total 411380
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 15:04 pilot3.tar.gz
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 15:12 queuedata.json
[2025-10-10 23:36:58] -rwx------. 1 boincer umatlas     36292 Oct 10 15:13 runpilot2-wrapper.sh
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas       100 Oct 10 18:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 23:36:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 18:15 run_atlas
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas       105 Oct 10 18:15 job.xml
[2025-10-10 23:36:58] -rw-r--r--. 2 boincer umatlas 220647455 Oct 10 18:16 EVNT.46676267._001771.pool.root.1
[2025-10-10 23:36:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:16 start_atlas.sh
[2025-10-10 23:36:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 18:16 shared
[2025-10-10 23:36:58] -rw-r--r--. 2 boincer umatlas    569682 Oct 10 18:16 input.tar.gz
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas         0 Oct 10 18:16 boinc_lockfile
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 18:16 pandaJob.out
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas    975517 Oct 10 18:17 agis_schedconf.cvmfs.json
[2025-10-10 23:36:58] drwx------. 5 boincer umatlas      4096 Oct 10 18:17 pilot3
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas      6659 Oct 10 23:29 init_data.xml
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas       530 Oct 10 23:35 boinc_task_state.xml
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas 190758417 Oct 10 23:35 HITS.46676269._043751.pool.root.1
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas      1040 Oct 10 23:36 memory_monitor_summary.json
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas   1560580 Oct 10 23:36 agis_ddmendpoints.agis.ALL.json
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas    542343 Oct 10 23:36 log.46676269._043751.job.log.tgz.1
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas        95 Oct 10 23:36 pilot_heartbeat.json
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas      7826 Oct 10 23:36 heartbeat.json
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 23:36 boinc_mmap_file
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas        27 Oct 10 23:36 wrapper_checkpoint.txt
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas      4552 Oct 10 23:36 pilotlog.txt
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas   2430388 Oct 10 23:36 log.46676269._043751.job.log.1
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas       357 Oct 10 23:36 output.list
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas       620 Oct 10 23:36 runtime_log
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas   2990080 Oct 10 23:36 result.tar.gz
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas      8701 Oct 10 23:36 runtime_log.err
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas       656 Oct 10 23:36 byANDmLjXR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUBeNDmDvQHRn.diag
[2025-10-10 23:36:58] -rw-r--r--. 1 boincer umatlas     21193 Oct 10 23:36 stderr.txt
[2025-10-10 23:36:58] HITS file was successfully produced:
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas 190758417 Oct 10 23:35 shared/HITS.pool.root.1
[2025-10-10 23:36:58]  *** Contents of shared directory: ***
[2025-10-10 23:36:58] total 405268
[2025-10-10 23:36:58] -rw-r--r--. 2 boincer umatlas 220647455 Oct 10 18:16 ATLAS.root_0
[2025-10-10 23:36:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:16 start_atlas.sh
[2025-10-10 23:36:58] -rw-r--r--. 2 boincer umatlas    569682 Oct 10 18:16 input.tar.gz
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas 190758417 Oct 10 23:35 HITS.pool.root.1
[2025-10-10 23:36:58] -rw-------. 1 boincer umatlas   2990080 Oct 10 23:36 result.tar.gz
23:37:00 (1104906): run_atlas exited; CPU time 50228.315094
23:37:00 (1104906): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN