Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:40:33 (1283030): wrapper (7.7.26015): starting
17:40:33 (1283030): wrapper: running run_atlas (--nthreads 9)
[2025-10-10 17:40:33] Arguments: --nthreads 9
[2025-10-10 17:40:33] Threads: 9
[2025-10-10 17:40:33] Checking for CVMFS
[2025-10-10 17:40:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 17:40:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 17:40:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 17:40:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 17:40:34] 2.13.2.0 601499 126933 479696 151562 3 393 31020871 32935937 45928 16776704 0 437652033 99.673 370850415 16765 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 17:40:34] CVMFS is ok
[2025-10-10 17:40:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 17:40:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 17:40:34] Further information can be found at the LHC@home message board.
[2025-10-10 17:40:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 17:40:34] Checking for apptainer binary...
[2025-10-10 17:40:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 17:40:34] Running /usr/bin/apptainer --version
[2025-10-10 17:40:34] apptainer version 1.4.3-1.el9
[2025-10-10 17:40:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 17:40:35] c7-16-9.aglt2.org
[2025-10-10 17:40:35] apptainer works
[2025-10-10 17:40:35] Set ATHENA_PROC_NUMBER=9
[2025-10-10 17:40:35] Set ATHENA_CORE_NUMBER=9
[2025-10-10 17:40:35] Starting ATLAS job with PandaID=6827069233
[2025-10-10 17:40:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 19:18:34]  *** The last 200 lines of the pilot log: ***
[2025-10-10 19:18:34] ]
[2025-10-10 19:18:34] 2025-10-10 23:17:46,752 | INFO     | transferring file log.46376905._024586.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6827069233/log.46376905._024586.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 19:18:34] 2025-10-10 23:17:46,753 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6827069233/log.46376905._024586.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._024586.job
[2025-10-10 19:18:34] 2025-10-10 23:17:46,922 | INFO     | adding to output.list: log.46376905._024586.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/96/log.46376905._024586.job.log.tg
[2025-10-10 19:18:34] 2025-10-10 23:17:46,923 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 19:18:34] 2025-10-10 23:17:46,923 | INFO     | summary of transferred files:
[2025-10-10 19:18:34] 2025-10-10 23:17:46,923 | INFO     |  -- lfn=log.46376905._024586.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 19:18:34] 2025-10-10 23:17:46,923 | INFO     | stage-out finished correctly
[2025-10-10 19:18:34] 2025-10-10 23:17:47,141 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 19:18:34] 2025-10-10 23:17:47,574 | INFO     | monitor loop #362: job 0:6827069233 is in state 'finished'
[2025-10-10 19:18:34] 2025-10-10 23:17:47,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:18:34] 2025-10-10 23:17:47,686 | INFO     | PID=1287319 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-10 19:18:34] 2025-10-10 23:17:47,687 | INFO     | .. there are 61 such processes running
[2025-10-10 19:18:34] 2025-10-10 23:17:48,059 | INFO     | job 6827069233 has state=finished
[2025-10-10 19:18:34] 2025-10-10 23:17:48,059 | INFO     | preparing for final server update for job 6827069233 in state='finished'
[2025-10-10 19:18:34] 2025-10-10 23:17:48,060 | INFO     | this job has now completed (state=finished)
[2025-10-10 19:18:34] 2025-10-10 23:17:48,060 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 19:18:34] 2025-10-10 23:17:48,060 | INFO     | log transfer has been attempted: DONE
[2025-10-10 19:18:34] 2025-10-10 23:17:48,060 | INFO     | job 6827069233 has finished - writing final server update
[2025-10-10 19:18:34] 2025-10-10 23:17:48,060 | INFO     | total number of processed events: 400 (read)
[2025-10-10 19:18:34] 2025-10-10 23:17:48,064 | INFO     | executing command: lscpu
[2025-10-10 19:18:34] 2025-10-10 23:17:48,136 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 19:18:34] 2025-10-10 23:17:48,688 | INFO     | time since job start (5812s) is within the limit (172800.0s)
[2025-10-10 19:18:34] 2025-10-10 23:17:50,079 | INFO     | monitor loop #363: job 0:6827069233 is in state 'finished'
[2025-10-10 19:18:34] 2025-10-10 23:17:50,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:18:34] 2025-10-10 23:17:50,695 | INFO     | time since job start (5814s) is within the limit (172800.0s)
[2025-10-10 19:18:34] 2025-10-10 23:17:52,584 | INFO     | monitor loop #364: job 0:6827069233 is in state 'finished'
[2025-10-10 19:18:34] 2025-10-10 23:17:52,584 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:18:34] 2025-10-10 23:17:52,711 | INFO     | time since job start (5816s) is within the limit (172800.0s)
[2025-10-10 19:18:34] 2025-10-10 23:17:54,718 | INFO     | time since job start (5818s) is within the limit (172800.0s)
[2025-10-10 19:18:34] 2025-10-10 23:17:55,099 | INFO     | monitor loop #365: job 0:6827069233 is in state 'finished'
[2025-10-10 19:18:34] 2025-10-10 23:17:55,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:18:34] 2025-10-10 23:17:56,725 | INFO     | time since job start (5820s) is within the limit (172800.0s)
[2025-10-10 19:18:34] 2025-10-10 23:17:57,604 | INFO     | monitor loop #366: job 0:6827069233 is in state 'finished'
[2025-10-10 19:18:34] 2025-10-10 23:17:57,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 19:18:34] 2025-10-10 23:17:58,731 | INFO     | time since job start (5822s) is within the limit (172800.0s)
[2025-10-10 19:18:34] 2025-10-10 23:17:59,401 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 19:18:34] 2025-10-10 23:17:59,458 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3237.239614583334
[2025-10-10 19:18:34] 2025-10-10 23:17:59,517 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6827069233/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 19:18:34] 2025-10-10 23:17:59,518 | INFO     | extracted standard info from prmon json
[2025-10-10 19:18:34] 2025-10-10 23:17:59,518 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 19:18:34] 2025-10-10 23:17:59,518 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 19:18:34] 2025-10-10 23:17:59,518 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 19:18:34] 2025-10-10 23:17:59,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 19:18:34] 2025-10-10 23:17:59,520 | INFO     | fitting pss+swap vs Time
[2025-10-10 19:18:34] 2025-10-10 23:17:59,521 | INFO     | sum of square deviations: 211285822.0
[2025-10-10 19:18:34] 2025-10-10 23:17:59,525 | INFO     | sum of deviations: -11449826178.5
[2025-10-10 19:18:34] 2025-10-10 23:17:59,525 | INFO     | mean x: 1760135459.5
[2025-10-10 19:18:34] 2025-10-10 23:17:59,525 | INFO     | mean y: 2279506.852272727
[2025-10-10 19:18:34] 2025-10-10 23:17:59,525 | INFO     | -- intersect: 95386081747.44572
[2025-10-10 19:18:34] 2025-10-10 23:17:59,526 | INFO     | intersect: 95386081747.44572
[2025-10-10 19:18:34] 2025-10-10 23:17:59,526 | INFO     | chi2: 0.13996559278602155
[2025-10-10 19:18:34] 2025-10-10 23:17:59,526 | INFO     | -- intersect: 95386081747.44572
[2025-10-10 19:18:34] 2025-10-10 23:17:59,526 | INFO     | current memory leak: -54.19 B/s (using 88 data points, chi2=0.14)
[2025-10-10 19:18:34] 2025-10-10 23:17:59,526 | INFO     | could have reported an average CPU frequency of 3259 MHz (7 samples)
[2025-10-10 19:18:34] 2025-10-10 23:17:59,527 | INFO     | ..............................
[2025-10-10 19:18:34] 2025-10-10 23:17:59,527 | INFO     | . Timing measurements:
[2025-10-10 19:18:34] 2025-10-10 23:17:59,527 | INFO     | . get job = 0 s
[2025-10-10 19:18:34] 2025-10-10 23:17:59,527 | INFO     | . initial setup = 3 s
[2025-10-10 19:18:34] 2025-10-10 23:17:59,527 | INFO     | . payload setup = 13 s
[2025-10-10 19:18:34] 2025-10-10 23:17:59,527 | INFO     | . stage-in = 0 s
[2025-10-10 19:18:34] 2025-10-10 23:17:59,527 | INFO     | . payload execution = 5768 s
[2025-10-10 19:18:34] 2025-10-10 23:17:59,527 | INFO     | . stage-out = 3 s
[2025-10-10 19:18:34] 2025-10-10 23:17:59,527 | INFO     | . log creation = 0 s
[2025-10-10 19:18:34] 2025-10-10 23:17:59,527 | INFO     | ..............................
[2025-10-10 19:18:34] 2025-10-10 23:17:59,746 | INFO     | 
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | job summary report
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | --------------------------------------------------
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | PanDA job id: 6827069233
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | task id: 46376905
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | errors: (none)
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | pilot state: finished 
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | transexitcode: 0
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | exeerrorcode: 0
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | exeerrordiag: 
[2025-10-10 19:18:34] 2025-10-10 23:17:59,747 | INFO     | exitcode: 0
[2025-10-10 19:18:34] 2025-10-10 23:17:59,748 | INFO     | exitmsg: OK
[2025-10-10 19:18:34] 2025-10-10 23:17:59,748 | INFO     | cpuconsumptiontime: 28998 s
[2025-10-10 19:18:34] 2025-10-10 23:17:59,748 | INFO     | nevents: 400
[2025-10-10 19:18:34] 2025-10-10 23:17:59,748 | INFO     | neventsw: 0
[2025-10-10 19:18:34] 2025-10-10 23:17:59,748 | INFO     | pid: 1294080
[2025-10-10 19:18:34] 2025-10-10 23:17:59,752 | INFO     | pgrp: 1294080
[2025-10-10 19:18:34] 2025-10-10 23:17:59,752 | INFO     | corecount: 9
[2025-10-10 19:18:34] 2025-10-10 23:17:59,752 | INFO     | event service: False
[2025-10-10 19:18:34] 2025-10-10 23:17:59,752 | INFO     | sizes: {0: 2348814, 10: 2349076, 11: 2349104, 5787: 2375693, 5791: 2384747, 5804: 2384885}
[2025-10-10 19:18:34] 2025-10-10 23:17:59,752 | INFO     | --------------------------------------------------
[2025-10-10 19:18:34] 2025-10-10 23:17:59,752 | INFO     | 
[2025-10-10 19:18:34] 2025-10-10 23:17:59,753 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 19:18:34] 2025-10-10 23:17:59,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,796 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 19:18:34] 2025-10-10 23:17:59,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,796 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 19:18:34] 2025-10-10 23:17:59,796 | INFO     | job 6827069233 has completed (purged errors)
[2025-10-10 19:18:34] 2025-10-10 23:17:59,796 | INFO     | overall cleanup function is called
[2025-10-10 19:18:34] 2025-10-10 23:18:00,806 | INFO     | --- collectZombieJob: --- 10, [1294080]
[2025-10-10 19:18:34] 2025-10-10 23:18:00,806 | INFO     | zombie collector waiting for pid 1294080
[2025-10-10 19:18:34] 2025-10-10 23:18:00,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 19:18:34] 2025-10-10 23:18:00,806 | INFO     | collected zombie processes
[2025-10-10 19:18:34] 2025-10-10 23:18:00,806 | INFO     | will attempt to kill all subprocesses of pid=1294080
[2025-10-10 19:18:34] 2025-10-10 23:18:03,436 | INFO     | process IDs to be killed: [1294080] (in reverse order)
[2025-10-10 19:18:34] 2025-10-10 23:18:03,653 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 19:18:34] 2025-10-10 23:18:03,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 19:18:34] 2025-10-10 23:18:03,690 | INFO     | did not find any defunct processes belonging to 1294080
[2025-10-10 19:18:34] 2025-10-10 23:18:03,718 | INFO     | did not find any defunct processes belonging to 1294080
[2025-10-10 19:18:34] 2025-10-10 23:18:03,718 | INFO     | ready for new job
[2025-10-10 19:18:34] 2025-10-10 23:18:03,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 19:18:34] 2025-10-10 23:18:03,723 | INFO     | ***************************************
[2025-10-10 19:18:34] 2025-10-10 23:18:03,723 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 19:18:34] 2025-10-10 23:18:03,723 | INFO     | ***************************************
[2025-10-10 19:18:34] 2025-10-10 23:18:03,723 | INFO     | 
[2025-10-10 19:18:34] 2025-10-10 23:18:03,749 | INFO     | architecture information:
[2025-10-10 19:18:34] 2025-10-10 23:18:03,757 | INFO     | executing command: cat /etc/os-release
[2025-10-10 19:18:34] 2025-10-10 23:18:03,780 | INFO     | cat /etc/os-release:
[2025-10-10 19:18:34] NAME="CentOS Linux"
[2025-10-10 19:18:34] VERSION="7 (Core)"
[2025-10-10 19:18:34] ID="centos"
[2025-10-10 19:18:34] ID_LIKE="rhel fedora"
[2025-10-10 19:18:34] VERSION_ID="7"
[2025-10-10 19:18:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 19:18:34] ANSI_COLOR="0;31"
[2025-10-10 19:18:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 19:18:34] HOME_URL="https://www.centos.org/"
[2025-10-10 19:18:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 19:18:34] 
[2025-10-10 19:18:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 19:18:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 19:18:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 19:18:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 19:18:34] 
[2025-10-10 19:18:34] 2025-10-10 23:18:03,780 | INFO     | ***************************************
[2025-10-10 19:18:34] 2025-10-10 23:18:04,283 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 19:18:34] 2025-10-10 23:18:04,336 | INFO     | sufficient remaining disk space (73389834240 B)
[2025-10-10 19:18:34] 2025-10-10 23:18:04,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 19:18:34] 2025-10-10 23:18:04,337 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 19:18:34] 2025-10-10 23:18:04,337 | INFO     | update_server=False
[2025-10-10 19:18:34] 2025-10-10 23:18:04,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 19:18:34] 2025-10-10 23:18:04,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:18:34] 2025-10-10 23:18:04,338 | INFO     | aborting loop
[2025-10-10 19:18:34] 2025-10-10 23:18:04,516 | INFO     | all payload control threads have been joined
[2025-10-10 19:18:34] 2025-10-10 23:18:04,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 19:18:34] 2025-10-10 23:18:05,011 | INFO     | all data control threads have been joined
[2025-10-10 19:18:34] 2025-10-10 23:18:05,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 19:18:34] 2025-10-10 23:18:05,343 | INFO     | [job] retrieve thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:05,348 | INFO     | [job] job monitor thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:05,398 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:05,435 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:05,441 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:05,522 | INFO     | [payload] control thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:05,549 | INFO     | all job control threads have been joined
[2025-10-10 19:18:34] 2025-10-10 23:18:05,807 | INFO     | [job] queue monitor thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:06,012 | INFO     | [data] copytool_in thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:06,013 | INFO     | [job] validate thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:06,018 | INFO     | [data] control thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:06,023 | INFO     | [payload] failed_post thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:06,146 | INFO     | [monitor] cgroup control has ended
[2025-10-10 19:18:34] 2025-10-10 23:18:06,555 | INFO     | [job] control thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:06,731 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:06,781 | INFO     | [payload] validate_post thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:06,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 19:18:34] 2025-10-10 23:18:07,258 | INFO     | [data] copytool_out thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:10,954 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 19:18:34] 2025-10-10 23:18:12,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732056057664)>', '<ExcThread(monitor, started 139731551627008)>']
[2025-10-10 19:18:34] 2025-10-10 23:18:17,160 | INFO     | all workflow threads have been joined
[2025-10-10 19:18:34] 2025-10-10 23:18:17,160 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 19:18:34] 2025-10-10 23:18:17,160 | INFO     | traces error code: 0
[2025-10-10 19:18:34] 2025-10-10 23:18:17,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 19:18:34] 2025-10-10 23:18:33,769 | INFO     | PID=1287319 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 19:18:34] 2025-10-10 23:18:33,769 | INFO     | .. there are 62 such processes running
[2025-10-10 19:18:34] 2025-10-10 23:18:33,770 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 19:18:34] 2025-10-10 23:18:33,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 19:18:34] 2025-10-10 23:18:33,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 19:18:34] 2025-10-10 23:18:33,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 19:18:34] 2025-10-10 23:18:33,770 | INFO     | [monitor] control thread has ended
[2025-10-10 19:18:34] 2025-10-10 23:18:34,034 [wrapper] ==== pilot stdout END ====
[2025-10-10 19:18:34] 2025-10-10 23:18:34,081 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 19:18:34] 2025-10-10 23:18:34,116 [wrapper] pilotpid: 1287319
[2025-10-10 19:18:34] 2025-10-10 23:18:34,142 [wrapper] Pilot exit status: 0
[2025-10-10 19:18:34] 2025-10-10 23:18:34,264 [wrapper] pandaids: 6827069233
[2025-10-10 19:18:34] 2025-10-10 23:18:34,428 [wrapper] cleanup supervisor_pilot 1935851 1287320
[2025-10-10 19:18:34] 2025-10-10 23:18:34,454 [wrapper] Test setup, not cleaning
[2025-10-10 19:18:34] 2025-10-10 23:18:34,477 [wrapper] apfmon messages muted
[2025-10-10 19:18:34] 2025-10-10 23:18:34,480 [wrapper] ==== wrapper stdout END ====
[2025-10-10 19:18:34] 2025-10-10 23:18:34,482 [wrapper] ==== wrapper stderr END ====
[2025-10-10 19:18:34]  *** Error codes and diagnostics ***
[2025-10-10 19:18:34]     "exeErrorCode": 0,
[2025-10-10 19:18:34]     "exeErrorDiag": "",
[2025-10-10 19:18:34]     "pilotErrorCode": 0,
[2025-10-10 19:18:34]     "pilotErrorDiag": "",
[2025-10-10 19:18:34]  *** Listing of results directory ***
[2025-10-10 19:18:34] total 391860
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas    552446 Oct  2 09:14 pilot3.tar.gz
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas      5112 Oct  2 09:40 queuedata.json
[2025-10-10 19:18:34] -rwx------. 1 boincer umatlas     36292 Oct  2 09:40 runpilot2-wrapper.sh
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas       100 Oct 10 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 19:18:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 17:40 run_atlas
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas       105 Oct 10 17:40 job.xml
[2025-10-10 19:18:34] -rw-r--r--. 2 boincer umatlas 213743786 Oct 10 17:40 EVNT.46376901._000750.pool.root.1
[2025-10-10 19:18:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 17:40 shared
[2025-10-10 19:18:34] -rw-r--r--. 2 boincer umatlas    565598 Oct 10 17:40 input.tar.gz
[2025-10-10 19:18:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 17:40 start_atlas.sh
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas         0 Oct 10 17:40 boinc_lockfile
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas      2518 Oct 10 17:40 pandaJob.out
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas    975517 Oct 10 17:40 agis_schedconf.cvmfs.json
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas   1560580 Oct 10 17:40 agis_ddmendpoints.agis.ALL.json
[2025-10-10 19:18:34] drwx------. 4 boincer umatlas      4096 Oct 10 17:40 pilot3
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas      6935 Oct 10 19:10 init_data.xml
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas 181395192 Oct 10 19:17 HITS.46376905._024586.pool.root.1
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas       529 Oct 10 19:17 boinc_task_state.xml
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas      1031 Oct 10 19:17 memory_monitor_summary.json
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas    351205 Oct 10 19:17 log.46376905._024586.job.log.tgz.1
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas        95 Oct 10 19:17 pilot_heartbeat.json
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas      7777 Oct 10 19:17 heartbeat.json
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas        27 Oct 10 19:18 wrapper_checkpoint.txt
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas       823 Oct 10 19:18 pilotlog.txt
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 19:18 boinc_mmap_file
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas    766995 Oct 10 19:18 log.46376905._024586.job.log.1
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas       357 Oct 10 19:18 output.list
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas       620 Oct 10 19:18 runtime_log
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas   1136640 Oct 10 19:18 result.tar.gz
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas      8698 Oct 10 19:18 runtime_log.err
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas       651 Oct 10 19:18 g92KDmBjYO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4lENDmNxivgn.diag
[2025-10-10 19:18:34] -rw-r--r--. 1 boincer umatlas     22442 Oct 10 19:18 stderr.txt
[2025-10-10 19:18:34] HITS file was successfully produced:
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas 181395192 Oct 10 19:17 shared/HITS.pool.root.1
[2025-10-10 19:18:34]  *** Contents of shared directory: ***
[2025-10-10 19:18:34] total 387572
[2025-10-10 19:18:34] -rw-r--r--. 2 boincer umatlas 213743786 Oct 10 17:40 ATLAS.root_0
[2025-10-10 19:18:34] -rw-r--r--. 2 boincer umatlas    565598 Oct 10 17:40 input.tar.gz
[2025-10-10 19:18:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 17:40 start_atlas.sh
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas 181395192 Oct 10 19:17 HITS.pool.root.1
[2025-10-10 19:18:34] -rw-------. 1 boincer umatlas   1136640 Oct 10 19:18 result.tar.gz
19:18:35 (1283030): run_atlas exited; CPU time 29257.971825
19:18:35 (1283030): called boinc_finish(0)

</stderr_txt>
]]>

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