Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:42 (3671136): wrapper (7.7.26015): starting
00:02:42 (3671136): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:02:42] Arguments: --nthreads 9
[2025-10-11 00:02:42] Threads: 9
[2025-10-11 00:02:42] Checking for CVMFS
[2025-10-11 00:02:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:02:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:02:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:02:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:02:46] 2.13.2.0 128645 107207 425468 151571 1 244 25375828 39288832 20269 16776704 0 117754391 99.488 165202740 32108 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:02:46] CVMFS is ok
[2025-10-11 00:02:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:02:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:02:46] Further information can be found at the LHC@home message board.
[2025-10-11 00:02:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:02:46] Checking for apptainer binary...
[2025-10-11 00:02:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:02:46] Running /usr/bin/apptainer --version
[2025-10-11 00:02:47] apptainer version 1.4.3-1.el9
[2025-10-11 00:02:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:02:48] c-211-27.aglt2.org
[2025-10-11 00:02:48] apptainer works
[2025-10-11 00:02:48] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:02:48] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:02:48] Starting ATLAS job with PandaID=6837595124
[2025-10-11 00:02:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:26:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:26:42] 2025-10-12 09:23:05,021 | INFO     | mean y: 2531428.4392088423
[2025-10-12 05:26:42] 2025-10-12 09:23:05,021 | INFO     | -- intersect: -3387637178.6176286
[2025-10-12 05:26:42] 2025-10-12 09:23:05,021 | INFO     | intersect: -3387637178.6176286
[2025-10-12 05:26:42] 2025-10-12 09:23:05,028 | INFO     | chi2: 7.634819396350872
[2025-10-12 05:26:42] 2025-10-12 09:23:05,028 | INFO     | current chi2=7.634819396350872 (change=8.357693120815538 %)
[2025-10-12 05:26:42] 2025-10-12 09:23:05,029 | INFO     | right removable region: 1718
[2025-10-12 05:26:42] 2025-10-12 09:23:05,034 | INFO     | sum of square deviations: 1575045800568.0945
[2025-10-12 05:26:42] 2025-10-12 09:23:05,240 | INFO     | sum of deviations: 2341090627886.793
[2025-10-12 05:26:42] 2025-10-12 09:23:05,241 | INFO     | mean x: 1760208470.735893
[2025-10-12 05:26:42] 2025-10-12 09:23:05,241 | INFO     | mean y: 2536831.77486911
[2025-10-12 05:26:42] 2025-10-12 09:23:05,241 | INFO     | -- intersect: -2613772835.2077875
[2025-10-12 05:26:42] 2025-10-12 09:23:05,241 | INFO     | intersect: -2613772835.2077875
[2025-10-12 05:26:42] 2025-10-12 09:23:05,252 | INFO     | chi2: 4.287749970909825
[2025-10-12 05:26:42] 2025-10-12 09:23:05,252 | INFO     | current chi2=4.287749970909825 (change=48.53325556814859 %)
[2025-10-12 05:26:42] 2025-10-12 09:23:05,263 | INFO     | sum of square deviations: 1561340882949.925
[2025-10-12 05:26:42] 2025-10-12 09:23:05,872 | INFO     | sum of deviations: 1926449610021.8865
[2025-10-12 05:26:42] 2025-10-12 09:23:05,872 | INFO     | mean x: 1760208623.2392066
[2025-10-12 05:26:42] 2025-10-12 09:23:05,872 | INFO     | mean y: 2541445.1831971994
[2025-10-12 05:26:42] 2025-10-12 09:23:05,873 | INFO     | -- intersect: -2169279745.7085843
[2025-10-12 05:26:42] 2025-10-12 09:23:05,873 | INFO     | intersect: -2169279745.7085843
[2025-10-12 05:26:42] 2025-10-12 09:23:05,875 | INFO     | chi2: 2.370919571130604
[2025-10-12 05:26:42] 2025-10-12 09:23:05,879 | INFO     | current chi2=2.370919571130604 (change=44.704808181072316 %)
[2025-10-12 05:26:42] 2025-10-12 09:23:05,882 | INFO     | sum of square deviations: 1547715792069.2048
[2025-10-12 05:26:42] 2025-10-12 09:23:05,978 | INFO     | monitor loop #4486: job 0:6837595124 is in state 'finished'
[2025-10-12 05:26:42] 2025-10-12 09:23:05,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:26:42] 2025-10-12 09:23:06,663 | INFO     | sum of deviations: 1679113868440.4006
[2025-10-12 05:26:42] 2025-10-12 09:23:06,664 | INFO     | mean x: 1760208775.7419543
[2025-10-12 05:26:42] 2025-10-12 09:23:06,664 | INFO     | mean y: 2544212.6653013458
[2025-10-12 05:26:42] 2025-10-12 09:23:06,664 | INFO     | -- intersect: -1907102882.6501532
[2025-10-12 05:26:42] 2025-10-12 09:23:06,664 | INFO     | intersect: -1907102882.6501532
[2025-10-12 05:26:42] 2025-10-12 09:23:06,672 | INFO     | chi2: 1.691172328405178
[2025-10-12 05:26:42] 2025-10-12 09:23:06,672 | INFO     | current chi2=1.691172328405178 (change=28.670194088502104 %)
[2025-10-12 05:26:42] 2025-10-12 09:23:06,681 | INFO     | sum of square deviations: 1534170400281.9292
[2025-10-12 05:26:42] 2025-10-12 09:23:07,989 | INFO     | sum of deviations: 1496836085644.0125
[2025-10-12 05:26:42] 2025-10-12 09:23:08,071 | INFO     | mean x: 1760208928.2435446
[2025-10-12 05:26:42] 2025-10-12 09:23:08,072 | INFO     | mean y: 2546264.501173709
[2025-10-12 05:26:42] 2025-10-12 09:23:08,072 | INFO     | -- intersect: -1714827660.574901
[2025-10-12 05:26:42] 2025-10-12 09:23:08,072 | INFO     | intersect: -1714827660.574901
[2025-10-12 05:26:42] 2025-10-12 09:23:08,101 | INFO     | chi2: 1.3480107236451904
[2025-10-12 05:26:42] 2025-10-12 09:23:08,101 | INFO     | current chi2=1.3480107236451904 (change=20.291344589560456 %)
[2025-10-12 05:26:42] 2025-10-12 09:23:08,101 | INFO     | left removable region: 40
[2025-10-12 05:26:42] 2025-10-12 09:23:08,104 | INFO     | sum of square deviations: 1465007334478.834
[2025-10-12 05:26:42] 2025-10-12 09:23:08,825 | INFO     | monitor loop #4487: job 0:6837595124 is in state 'finished'
[2025-10-12 05:26:42] 2025-10-12 09:23:08,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:26:42] 2025-10-12 09:23:09,439 | INFO     | sum of deviations: 1206436865177.8591
[2025-10-12 05:26:42] 2025-10-12 09:23:09,439 | INFO     | mean x: 1760209355.2550654
[2025-10-12 05:26:42] 2025-10-12 09:23:09,439 | INFO     | mean y: 2551973.2222884386
[2025-10-12 05:26:42] 2025-10-12 09:23:09,440 | INFO     | -- intersect: -1446984426.1064637
[2025-10-12 05:26:42] 2025-10-12 09:23:09,440 | INFO     | intersect: -1446984426.1064637
[2025-10-12 05:26:42] 2025-10-12 09:23:09,442 | INFO     | chi2: 0.26751515891222066
[2025-10-12 05:26:42] 2025-10-12 09:23:09,442 | INFO     | -- intersect: -1446984426.1064637
[2025-10-12 05:26:42] 2025-10-12 09:23:09,442 | INFO     | current memory leak: 0.82 B/s (using 1678 data points, chi2=0.27)
[2025-10-12 05:26:42] 2025-10-12 09:23:09,444 | INFO     | could have reported an average CPU frequency of 2899 MHz (60 samples)
[2025-10-12 05:26:42] 2025-10-12 09:23:09,445 | INFO     | ..............................
[2025-10-12 05:26:42] 2025-10-12 09:23:09,445 | INFO     | . Timing measurements:
[2025-10-12 05:26:42] 2025-10-12 09:23:09,445 | INFO     | . get job = 2 s
[2025-10-12 05:26:42] 2025-10-12 09:23:09,445 | INFO     | . initial setup = 12 s
[2025-10-12 05:26:42] 2025-10-12 09:23:09,445 | INFO     | . payload setup = 69 s
[2025-10-12 05:26:42] 2025-10-12 09:23:09,445 | INFO     | . stage-in = 0 s
[2025-10-12 05:26:42] 2025-10-12 09:23:09,512 | INFO     | . payload execution = 105206 s
[2025-10-12 05:26:42] 2025-10-12 09:23:09,512 | INFO     | . stage-out = 9 s
[2025-10-12 05:26:42] 2025-10-12 09:23:09,512 | INFO     | . log creation = 1 s
[2025-10-12 05:26:42] 2025-10-12 09:23:09,512 | INFO     | ..............................
[2025-10-12 05:26:42] 2025-10-12 09:23:12,090 | INFO     | 
[2025-10-12 05:26:42] 2025-10-12 09:23:12,090 | INFO     | job summary report
[2025-10-12 05:26:42] 2025-10-12 09:23:12,090 | INFO     | --------------------------------------------------
[2025-10-12 05:26:42] 2025-10-12 09:23:12,090 | INFO     | PanDA job id: 6837595124
[2025-10-12 05:26:42] 2025-10-12 09:23:12,091 | INFO     | task id: 46676269
[2025-10-12 05:26:42] 2025-10-12 09:23:12,091 | INFO     | errors: (none)
[2025-10-12 05:26:42] 2025-10-12 09:23:12,091 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:26:42] 2025-10-12 09:23:12,091 | INFO     | pilot state: finished 
[2025-10-12 05:26:42] 2025-10-12 09:23:12,091 | INFO     | transexitcode: 0
[2025-10-12 05:26:42] 2025-10-12 09:23:12,091 | INFO     | exeerrorcode: 0
[2025-10-12 05:26:42] 2025-10-12 09:23:12,092 | INFO     | exeerrordiag: 
[2025-10-12 05:26:42] 2025-10-12 09:23:12,092 | INFO     | exitcode: 0
[2025-10-12 05:26:42] 2025-10-12 09:23:12,092 | INFO     | exitmsg: OK
[2025-10-12 05:26:42] 2025-10-12 09:23:12,092 | INFO     | cpuconsumptiontime: 80208 s
[2025-10-12 05:26:42] 2025-10-12 09:23:12,092 | INFO     | nevents: 400
[2025-10-12 05:26:42] 2025-10-12 09:23:12,092 | INFO     | neventsw: 0
[2025-10-12 05:26:42] 2025-10-12 09:23:12,092 | INFO     | pid: 3708191
[2025-10-12 05:26:42] 2025-10-12 09:23:12,093 | INFO     | pgrp: 3708191
[2025-10-12 05:26:42] 2025-10-12 09:23:12,093 | INFO     | corecount: 9
[2025-10-12 05:26:42] 2025-10-12 09:23:12,093 | INFO     | event service: False
[2025-10-12 05:26:42] 2025-10-12 09:23:12,093 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348742, 4: 2348969, 5: 2348969, 16: 2349153, 29: 2349181, 40: 2349209, 52: 2349237, 64: 2349265, 67: 2349863, 77: 2
[2025-10-12 05:26:42] 2025-10-12 09:23:12,093 | INFO     | --------------------------------------------------
[2025-10-12 05:26:42] 2025-10-12 09:23:12,093 | INFO     | 
[2025-10-12 05:26:42] 2025-10-12 09:23:12,118 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 05:26:42] 2025-10-12 09:23:12,397 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,398 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,398 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,398 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,399 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,400 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:26:42] 2025-10-12 09:23:12,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:26:42] 2025-10-12 09:23:12,453 | INFO     | job 6837595124 has completed (purged errors)
[2025-10-12 05:26:42] 2025-10-12 09:23:12,453 | INFO     | overall cleanup function is called
[2025-10-12 05:26:42] 2025-10-12 09:23:13,594 | INFO     | --- collectZombieJob: --- 10, [3708191]
[2025-10-12 05:26:42] 2025-10-12 09:23:13,595 | INFO     | zombie collector waiting for pid 3708191
[2025-10-12 05:26:42] 2025-10-12 09:23:13,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:26:42] 2025-10-12 09:23:13,595 | INFO     | collected zombie processes
[2025-10-12 05:26:42] 2025-10-12 09:23:13,595 | INFO     | will attempt to kill all subprocesses of pid=3708191
[2025-10-12 05:26:42] 2025-10-12 09:23:18,368 | INFO     | PID=3683332 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 05:26:42] 2025-10-12 09:23:18,512 | INFO     | .. there are 24 such processes running
[2025-10-12 05:26:42] 2025-10-12 09:23:22,913 | INFO     | process IDs to be killed: [3708191] (in reverse order)
[2025-10-12 05:26:42] 2025-10-12 09:23:24,840 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:26:42] 2025-10-12 09:23:24,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:26:42] 2025-10-12 09:23:24,883 | INFO     | did not find any defunct processes belonging to 3708191
[2025-10-12 05:26:42] 2025-10-12 09:23:24,902 | INFO     | did not find any defunct processes belonging to 3708191
[2025-10-12 05:26:42] 2025-10-12 09:23:24,902 | INFO     | ready for new job
[2025-10-12 05:26:42] 2025-10-12 09:23:24,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:26:42] 2025-10-12 09:23:24,909 | INFO     | ***************************************
[2025-10-12 05:26:42] 2025-10-12 09:23:24,910 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:26:42] 2025-10-12 09:23:24,910 | INFO     | ***************************************
[2025-10-12 05:26:42] 2025-10-12 09:23:24,910 | INFO     | 
[2025-10-12 05:26:42] 2025-10-12 09:23:24,912 | INFO     | architecture information:
[2025-10-12 05:26:42] 2025-10-12 09:23:24,913 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:26:42] 2025-10-12 09:23:25,091 | INFO     | cat /etc/os-release:
[2025-10-12 05:26:42] NAME="CentOS Linux"
[2025-10-12 05:26:42] VERSION="7 (Core)"
[2025-10-12 05:26:42] ID="centos"
[2025-10-12 05:26:42] ID_LIKE="rhel fedora"
[2025-10-12 05:26:42] VERSION_ID="7"
[2025-10-12 05:26:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:26:42] ANSI_COLOR="0;31"
[2025-10-12 05:26:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:26:42] HOME_URL="https://www.centos.org/"
[2025-10-12 05:26:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:26:42] 
[2025-10-12 05:26:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:26:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:26:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:26:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:26:42] 
[2025-10-12 05:26:42] 2025-10-12 09:23:25,091 | INFO     | ***************************************
[2025-10-12 05:26:42] 2025-10-12 09:23:25,595 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 05:26:42] 2025-10-12 09:23:25,707 | INFO     | sufficient remaining disk space (51786022912 B)
[2025-10-12 05:26:42] 2025-10-12 09:23:25,708 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:26:42] 2025-10-12 09:23:25,708 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:26:42] 2025-10-12 09:23:25,708 | INFO     | update_server=False
[2025-10-12 05:26:42] 2025-10-12 09:23:25,708 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:26:42] 2025-10-12 09:23:25,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:26:42] 2025-10-12 09:23:25,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:26:42] 2025-10-12 09:23:25,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:26:42] 2025-10-12 09:23:25,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:26:42] 2025-10-12 09:23:25,984 | INFO     | aborting loop
[2025-10-12 05:26:42] 2025-10-12 09:23:26,281 | INFO     | all payload control threads have been joined
[2025-10-12 05:26:42] 2025-10-12 09:23:26,441 | INFO     | all data control threads have been joined
[2025-10-12 05:26:42] 2025-10-12 09:23:26,714 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:26,726 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:26,844 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:26,850 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:26,973 | INFO     | [job] validate thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:26,990 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:27,287 | INFO     | [payload] control thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:27,316 | INFO     | all job control threads have been joined
[2025-10-12 05:26:42] 2025-10-12 09:23:27,354 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:27,447 | INFO     | [data] control thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:27,716 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:27,775 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:27,888 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:27,986 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:28,251 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:28,338 | INFO     | [job] control thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:29,718 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:26:42] 2025-10-12 09:23:32,448 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:26:42] 2025-10-12 09:23:34,099 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139946567612224)>', '<ExcThread(monitor, started 139945259820800)>']
[2025-10-12 05:26:42] 2025-10-12 09:23:39,129 | INFO     | all workflow threads have been joined
[2025-10-12 05:26:42] 2025-10-12 09:23:39,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:26:42] 2025-10-12 09:23:39,130 | INFO     | traces error code: 0
[2025-10-12 05:26:42] 2025-10-12 09:23:39,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:26:42] 2025-10-12 09:23:57,260 | INFO     | PID=3683332 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 05:26:42] 2025-10-12 09:23:57,280 | INFO     | .. there are 24 such processes running
[2025-10-12 05:26:42] 2025-10-12 09:23:57,281 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:26:42] 2025-10-12 09:23:57,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:26:42] 2025-10-12 09:23:57,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:26:42] 2025-10-12 09:23:57,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:26:42] 2025-10-12 09:23:57,282 | INFO     | [monitor] control thread has ended
[2025-10-12 05:26:42] 2025-10-12 09:24:00,201 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:26:42] 2025-10-12 09:24:00,212 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:26:42] 2025-10-12 09:24:00,215 [wrapper] pilotpid: 3683332
[2025-10-12 05:26:42] 2025-10-12 09:24:00,218 [wrapper] Pilot exit status: 0
[2025-10-12 05:26:42] 2025-10-12 09:24:00,263 [wrapper] pandaids: 6837595124
[2025-10-12 05:26:42] 2025-10-12 09:24:00,361 [wrapper] cleanup supervisor_pilot 4078926 3683333
[2025-10-12 05:26:42] 2025-10-12 09:24:00,366 [wrapper] Test setup, not cleaning
[2025-10-12 05:26:42] 2025-10-12 09:24:00,370 [wrapper] apfmon messages muted
[2025-10-12 05:26:42] 2025-10-12 09:24:00,373 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:26:42] 2025-10-12 09:24:00,376 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:26:42]  *** Error codes and diagnostics ***
[2025-10-12 05:26:42]     "exeErrorCode": 0,
[2025-10-12 05:26:42]     "exeErrorDiag": "",
[2025-10-12 05:26:42]     "pilotErrorCode": 0,
[2025-10-12 05:26:42]     "pilotErrorDiag": "",
[2025-10-12 05:26:42]  *** Listing of results directory ***
[2025-10-12 05:26:42] total 433952
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 06:29 pilot3.tar.gz
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 06:38 queuedata.json
[2025-10-12 05:26:42] -rwx------. 1 boincer umatlas     36292 Oct 10 06:38 runpilot2-wrapper.sh
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:26:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:02 run_atlas
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:02 job.xml
[2025-10-12 05:26:42] -rw-r--r--. 2 boincer umatlas 221883284 Oct 11 00:02 EVNT.46676267._001505.pool.root.1
[2025-10-12 05:26:42] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 00:02 input.tar.gz
[2025-10-12 05:26:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-12 05:26:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:02 shared
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:02 boinc_lockfile
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:02 pandaJob.out
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas    975509 Oct 11 00:04 agis_schedconf.cvmfs.json
[2025-10-12 05:26:42] drwx------. 5 boincer umatlas      4096 Oct 11 00:05 pilot3
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas      6525 Oct 12 05:20 init_data.xml
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas 194521103 Oct 12 05:20 HITS.46676269._037046.pool.root.1
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas       531 Oct 12 05:20 boinc_task_state.xml
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas      1046 Oct 12 05:21 memory_monitor_summary.json
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas   1560580 Oct 12 05:22 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas   1442622 Oct 12 05:22 log.46676269._037046.job.log.tgz.1
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas      7834 Oct 12 05:23 heartbeat.json
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas        95 Oct 12 05:23 pilot_heartbeat.json
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas       823 Oct 12 05:23 pilotlog.txt
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas  10587035 Oct 12 05:24 log.46676269._037046.job.log.1
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas       357 Oct 12 05:24 output.list
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas       620 Oct 12 05:24 runtime_log
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas  12052480 Oct 12 05:24 result.tar.gz
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 05:24 runtime_log.err
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas       660 Oct 12 05:24 MJJKDmThPR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm55cNDmJxOzrm.diag
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 05:26 boinc_mmap_file
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas     21329 Oct 12 05:26 stderr.txt
[2025-10-12 05:26:42] -rw-r--r--. 1 boincer umatlas        28 Oct 12 05:26 wrapper_checkpoint.txt
[2025-10-12 05:26:42] HITS file was successfully produced:
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas 194521103 Oct 12 05:20 shared/HITS.pool.root.1
[2025-10-12 05:26:42]  *** Contents of shared directory: ***
[2025-10-12 05:26:42] total 419000
[2025-10-12 05:26:42] -rw-r--r--. 2 boincer umatlas 221883284 Oct 11 00:02 ATLAS.root_0
[2025-10-12 05:26:42] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 00:02 input.tar.gz
[2025-10-12 05:26:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas 194521103 Oct 12 05:20 HITS.pool.root.1
[2025-10-12 05:26:42] -rw-------. 1 boincer umatlas  12052480 Oct 12 05:24 result.tar.gz
05:26:44 (3671136): run_atlas exited; CPU time 84737.650380
05:26:44 (3671136): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN