Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:23 (2417747): wrapper (7.7.26015): starting
17:20:23 (2417747): wrapper: running run_atlas (--nthreads 11)
[2025-10-10 17:20:23] Arguments: --nthreads 11
[2025-10-10 17:20:23] Threads: 11
[2025-10-10 17:20:23] Checking for CVMFS
[2025-10-10 17:20:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 17:20:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 17:20:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 17:20:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 17:20:23] 2.13.2.0 128665 114941 209828 151562 2 65 22314862 39288833 5281 16776704 0 71552885 99.730 52499690 36936 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 17:20:23] CVMFS is ok
[2025-10-10 17:20:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 17:20:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 17:20:23] Further information can be found at the LHC@home message board.
[2025-10-10 17:20:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 17:20:23] Checking for apptainer binary...
[2025-10-10 17:20:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 17:20:23] Running /usr/bin/apptainer --version
[2025-10-10 17:20:23] apptainer version 1.4.3-1.el9
[2025-10-10 17:20:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 17:20:24] c-210-2.aglt2.org
[2025-10-10 17:20:24] apptainer works
[2025-10-10 17:20:24] Set ATHENA_PROC_NUMBER=11
[2025-10-10 17:20:24] Set ATHENA_CORE_NUMBER=11
[2025-10-10 17:20:24] Starting ATLAS job with PandaID=6826993070
[2025-10-10 17:20:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 18:48:09]  *** The last 200 lines of the pilot log: ***
[2025-10-10 18:48:09] ]
[2025-10-10 18:48:09] 2025-10-10 22:47:25,654 | INFO     | transferring file log.46376905._024490.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6826993070/log.46376905._024490.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 18:48:09] 2025-10-10 22:47:25,655 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6826993070/log.46376905._024490.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._024490.job
[2025-10-10 18:48:09] 2025-10-10 22:47:25,662 | INFO     | time since job start (5210s) is within the limit (172800.0s)
[2025-10-10 18:48:09] 2025-10-10 22:47:25,679 | INFO     | adding to output.list: log.46376905._024490.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/65/log.46376905._024490.job.log.tg
[2025-10-10 18:48:09] 2025-10-10 22:47:25,680 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 18:48:09] 2025-10-10 22:47:25,680 | INFO     | summary of transferred files:
[2025-10-10 18:48:09] 2025-10-10 22:47:25,681 | INFO     |  -- lfn=log.46376905._024490.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 18:48:09] 2025-10-10 22:47:25,681 | INFO     | stage-out finished correctly
[2025-10-10 18:48:09] 2025-10-10 22:47:26,061 | INFO     | monitor loop #384: job 0:6826993070 is in state 'finished'
[2025-10-10 18:48:09] 2025-10-10 22:47:26,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:48:09] 2025-10-10 22:47:27,668 | INFO     | time since job start (5212s) is within the limit (172800.0s)
[2025-10-10 18:48:09] 2025-10-10 22:47:28,566 | INFO     | monitor loop #385: job 0:6826993070 is in state 'finished'
[2025-10-10 18:48:09] 2025-10-10 22:47:28,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:48:09] 2025-10-10 22:47:29,088 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 18:48:09] 2025-10-10 22:47:29,674 | INFO     | time since job start (5214s) is within the limit (172800.0s)
[2025-10-10 18:48:09] 2025-10-10 22:47:31,069 | INFO     | monitor loop #386: job 0:6826993070 is in state 'finished'
[2025-10-10 18:48:09] 2025-10-10 22:47:31,069 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:48:09] 2025-10-10 22:47:31,193 | INFO     | job 6826993070 has state=finished
[2025-10-10 18:48:09] 2025-10-10 22:47:31,193 | INFO     | preparing for final server update for job 6826993070 in state='finished'
[2025-10-10 18:48:09] 2025-10-10 22:47:31,194 | INFO     | this job has now completed (state=finished)
[2025-10-10 18:48:09] 2025-10-10 22:47:31,194 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 18:48:09] 2025-10-10 22:47:31,194 | INFO     | log transfer has been attempted: DONE
[2025-10-10 18:48:09] 2025-10-10 22:47:31,194 | INFO     | job 6826993070 has finished - writing final server update
[2025-10-10 18:48:09] 2025-10-10 22:47:31,194 | INFO     | total number of processed events: 400 (read)
[2025-10-10 18:48:09] 2025-10-10 22:47:31,195 | INFO     | executing command: lscpu
[2025-10-10 18:48:09] 2025-10-10 22:47:31,245 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 18:48:09] 2025-10-10 22:47:31,681 | INFO     | time since job start (5216s) is within the limit (172800.0s)
[2025-10-10 18:48:09] 2025-10-10 22:47:33,574 | INFO     | monitor loop #387: job 0:6826993070 is in state 'finished'
[2025-10-10 18:48:09] 2025-10-10 22:47:33,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:48:09] 2025-10-10 22:47:33,688 | INFO     | time since job start (5218s) is within the limit (172800.0s)
[2025-10-10 18:48:09] 2025-10-10 22:47:35,694 | INFO     | time since job start (5220s) is within the limit (172800.0s)
[2025-10-10 18:48:09] 2025-10-10 22:47:36,077 | INFO     | monitor loop #388: job 0:6826993070 is in state 'finished'
[2025-10-10 18:48:09] 2025-10-10 22:47:36,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:48:09] 2025-10-10 22:47:36,212 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 18:48:09] 2025-10-10 22:47:36,219 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.003125
[2025-10-10 18:48:09] 2025-10-10 22:47:36,226 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6826993070/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 18:48:09] 2025-10-10 22:47:36,227 | INFO     | extracted standard info from prmon json
[2025-10-10 18:48:09] 2025-10-10 22:47:36,228 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 18:48:09] 2025-10-10 22:47:36,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 18:48:09] 2025-10-10 22:47:36,228 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 18:48:09] 2025-10-10 22:47:36,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 18:48:09] 2025-10-10 22:47:36,231 | INFO     | fitting pss+swap vs Time
[2025-10-10 18:48:09] 2025-10-10 22:47:36,231 | INFO     | sum of square deviations: 147126479.5
[2025-10-10 18:48:09] 2025-10-10 22:47:36,232 | INFO     | sum of deviations: -17495924687.5
[2025-10-10 18:48:09] 2025-10-10 22:47:36,232 | INFO     | mean x: 1760133914.5
[2025-10-10 18:48:09] 2025-10-10 22:47:36,232 | INFO     | mean y: 2873344.346153846
[2025-10-10 18:48:09] 2025-10-10 22:47:36,232 | INFO     | -- intersect: 209313736437.52963
[2025-10-10 18:48:09] 2025-10-10 22:47:36,232 | INFO     | intersect: 209313736437.52963
[2025-10-10 18:48:09] 2025-10-10 22:47:36,232 | INFO     | chi2: 0.11892539467360273
[2025-10-10 18:48:09] 2025-10-10 22:47:36,233 | INFO     | -- intersect: 209313736437.52963
[2025-10-10 18:48:09] 2025-10-10 22:47:36,233 | INFO     | current memory leak: -118.92 B/s (using 78 data points, chi2=0.12)
[2025-10-10 18:48:09] 2025-10-10 22:47:36,233 | INFO     | could have reported an average CPU frequency of 2609 MHz (6 samples)
[2025-10-10 18:48:09] 2025-10-10 22:47:36,234 | INFO     | ..............................
[2025-10-10 18:48:09] 2025-10-10 22:47:36,234 | INFO     | . Timing measurements:
[2025-10-10 18:48:09] 2025-10-10 22:47:36,234 | INFO     | . get job = 0 s
[2025-10-10 18:48:09] 2025-10-10 22:47:36,234 | INFO     | . initial setup = 2 s
[2025-10-10 18:48:09] 2025-10-10 22:47:36,234 | INFO     | . payload setup = 5 s
[2025-10-10 18:48:09] 2025-10-10 22:47:36,234 | INFO     | . stage-in = 0 s
[2025-10-10 18:48:09] 2025-10-10 22:47:36,234 | INFO     | . payload execution = 5183 s
[2025-10-10 18:48:09] 2025-10-10 22:47:36,234 | INFO     | . stage-out = 0 s
[2025-10-10 18:48:09] 2025-10-10 22:47:36,234 | INFO     | . log creation = 0 s
[2025-10-10 18:48:09] 2025-10-10 22:47:36,235 | INFO     | ..............................
[2025-10-10 18:48:09] 2025-10-10 22:47:36,348 | INFO     | 
[2025-10-10 18:48:09] 2025-10-10 22:47:36,348 | INFO     | job summary report
[2025-10-10 18:48:09] 2025-10-10 22:47:36,348 | INFO     | --------------------------------------------------
[2025-10-10 18:48:09] 2025-10-10 22:47:36,348 | INFO     | PanDA job id: 6826993070
[2025-10-10 18:48:09] 2025-10-10 22:47:36,348 | INFO     | task id: 46376905
[2025-10-10 18:48:09] 2025-10-10 22:47:36,349 | INFO     | errors: (none)
[2025-10-10 18:48:09] 2025-10-10 22:47:36,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 18:48:09] 2025-10-10 22:47:36,349 | INFO     | pilot state: finished 
[2025-10-10 18:48:09] 2025-10-10 22:47:36,349 | INFO     | transexitcode: 0
[2025-10-10 18:48:09] 2025-10-10 22:47:36,349 | INFO     | exeerrorcode: 0
[2025-10-10 18:48:09] 2025-10-10 22:47:36,349 | INFO     | exeerrordiag: 
[2025-10-10 18:48:09] 2025-10-10 22:47:36,349 | INFO     | exitcode: 0
[2025-10-10 18:48:09] 2025-10-10 22:47:36,349 | INFO     | exitmsg: OK
[2025-10-10 18:48:09] 2025-10-10 22:47:36,349 | INFO     | cpuconsumptiontime: 42620 s
[2025-10-10 18:48:09] 2025-10-10 22:47:36,350 | INFO     | nevents: 400
[2025-10-10 18:48:09] 2025-10-10 22:47:36,350 | INFO     | neventsw: 0
[2025-10-10 18:48:09] 2025-10-10 22:47:36,350 | INFO     | pid: 2428041
[2025-10-10 18:48:09] 2025-10-10 22:47:36,350 | INFO     | pgrp: 2428041
[2025-10-10 18:48:09] 2025-10-10 22:47:36,350 | INFO     | corecount: 11
[2025-10-10 18:48:09] 2025-10-10 22:47:36,350 | INFO     | event service: False
[2025-10-10 18:48:09] 2025-10-10 22:47:36,350 | INFO     | sizes: {0: 2348814, 5: 2349076, 11: 2349132, 5192: 2375544, 5193: 2375543, 5195: 2384597, 5198: 2384781, 5205: 2384975}
[2025-10-10 18:48:09] 2025-10-10 22:47:36,350 | INFO     | --------------------------------------------------
[2025-10-10 18:48:09] 2025-10-10 22:47:36,350 | INFO     | 
[2025-10-10 18:48:09] 2025-10-10 22:47:36,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 18:48:09] 2025-10-10 22:47:36,372 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,372 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,372 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,373 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 18:48:09] 2025-10-10 22:47:36,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 18:48:09] 2025-10-10 22:47:36,375 | INFO     | job 6826993070 has completed (purged errors)
[2025-10-10 18:48:09] 2025-10-10 22:47:36,375 | INFO     | overall cleanup function is called
[2025-10-10 18:48:09] 2025-10-10 22:47:37,384 | INFO     | --- collectZombieJob: --- 10, [2428041]
[2025-10-10 18:48:09] 2025-10-10 22:47:37,384 | INFO     | zombie collector waiting for pid 2428041
[2025-10-10 18:48:09] 2025-10-10 22:47:37,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 18:48:09] 2025-10-10 22:47:37,384 | INFO     | collected zombie processes
[2025-10-10 18:48:09] 2025-10-10 22:47:37,384 | INFO     | will attempt to kill all subprocesses of pid=2428041
[2025-10-10 18:48:09] 2025-10-10 22:47:37,633 | INFO     | process IDs to be killed: [2428041] (in reverse order)
[2025-10-10 18:48:09] 2025-10-10 22:47:37,704 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 18:48:09] 2025-10-10 22:47:37,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 18:48:09] 2025-10-10 22:47:37,714 | INFO     | did not find any defunct processes belonging to 2428041
[2025-10-10 18:48:09] 2025-10-10 22:47:37,723 | INFO     | did not find any defunct processes belonging to 2428041
[2025-10-10 18:48:09] 2025-10-10 22:47:37,724 | INFO     | ready for new job
[2025-10-10 18:48:09] 2025-10-10 22:47:37,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 18:48:09] 2025-10-10 22:47:37,726 | INFO     | ***************************************
[2025-10-10 18:48:09] 2025-10-10 22:47:37,726 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 18:48:09] 2025-10-10 22:47:37,726 | INFO     | ***************************************
[2025-10-10 18:48:09] 2025-10-10 22:47:37,726 | INFO     | 
[2025-10-10 18:48:09] 2025-10-10 22:47:37,729 | INFO     | architecture information:
[2025-10-10 18:48:09] 2025-10-10 22:47:37,729 | INFO     | executing command: cat /etc/os-release
[2025-10-10 18:48:09] 2025-10-10 22:47:37,747 | INFO     | cat /etc/os-release:
[2025-10-10 18:48:09] NAME="CentOS Linux"
[2025-10-10 18:48:09] VERSION="7 (Core)"
[2025-10-10 18:48:09] ID="centos"
[2025-10-10 18:48:09] ID_LIKE="rhel fedora"
[2025-10-10 18:48:09] VERSION_ID="7"
[2025-10-10 18:48:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 18:48:09] ANSI_COLOR="0;31"
[2025-10-10 18:48:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 18:48:09] HOME_URL="https://www.centos.org/"
[2025-10-10 18:48:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 18:48:09] 
[2025-10-10 18:48:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 18:48:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 18:48:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 18:48:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 18:48:09] 
[2025-10-10 18:48:09] 2025-10-10 22:47:37,748 | INFO     | ***************************************
[2025-10-10 18:48:09] 2025-10-10 22:47:38,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 18:48:09] 2025-10-10 22:47:38,270 | INFO     | sufficient remaining disk space (52656340992 B)
[2025-10-10 18:48:09] 2025-10-10 22:47:38,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 18:48:09] 2025-10-10 22:47:38,271 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 18:48:09] 2025-10-10 22:47:38,271 | INFO     | update_server=False
[2025-10-10 18:48:09] 2025-10-10 22:47:38,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 18:48:09] 2025-10-10 22:47:38,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:48:09] 2025-10-10 22:47:38,375 | INFO     | all data control threads have been joined
[2025-10-10 18:48:09] 2025-10-10 22:47:38,427 | INFO     | all payload control threads have been joined
[2025-10-10 18:48:09] 2025-10-10 22:47:38,582 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 18:48:09] 2025-10-10 22:47:38,582 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 18:48:09] 2025-10-10 22:47:38,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:48:09] 2025-10-10 22:47:38,582 | INFO     | will abort loop
[2025-10-10 18:48:09] 2025-10-10 22:47:38,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 18:48:09] 2025-10-10 22:47:39,278 | INFO     | [job] retrieve thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:39,279 | INFO     | [job] queue monitor thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:39,380 | INFO     | [data] control thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:39,386 | INFO     | [payload] validate_post thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:39,407 | INFO     | all job control threads have been joined
[2025-10-10 18:48:09] 2025-10-10 22:47:39,433 | INFO     | [payload] control thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:39,587 | INFO     | [job] job monitor thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:39,670 | INFO     | [payload] failed_post thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:39,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 18:48:09] 2025-10-10 22:47:39,756 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:39,779 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:39,780 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:39,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:40,413 | INFO     | [job] control thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:40,744 | INFO     | [job] validate thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:40,751 | INFO     | [data] copytool_in thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:40,831 | INFO     | [data] copytool_out thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:43,716 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 18:48:09] 2025-10-10 22:47:43,911 | INFO     | [monitor] cgroup control has ended
[2025-10-10 18:48:09] 2025-10-10 22:47:45,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232554772288)>', '<ExcThread(monitor, started 140231613343488)>']
[2025-10-10 18:48:09] 2025-10-10 22:47:50,967 | INFO     | all workflow threads have been joined
[2025-10-10 18:48:09] 2025-10-10 22:47:50,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 18:48:09] 2025-10-10 22:47:50,967 | INFO     | traces error code: 0
[2025-10-10 18:48:09] 2025-10-10 22:47:50,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 18:48:09] 2025-10-10 22:48:09,111 | INFO     | PID=2421674 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 18:48:09] 2025-10-10 22:48:09,111 | INFO     | .. there are 6 such processes running
[2025-10-10 18:48:09] 2025-10-10 22:48:09,111 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 18:48:09] 2025-10-10 22:48:09,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 18:48:09] 2025-10-10 22:48:09,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 18:48:09] 2025-10-10 22:48:09,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 18:48:09] 2025-10-10 22:48:09,112 | INFO     | [monitor] control thread has ended
[2025-10-10 18:48:09] 2025-10-10 22:48:09,286 [wrapper] ==== pilot stdout END ====
[2025-10-10 18:48:09] 2025-10-10 22:48:09,290 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 18:48:09] 2025-10-10 22:48:09,293 [wrapper] pilotpid: 2421674
[2025-10-10 18:48:09] 2025-10-10 22:48:09,296 [wrapper] Pilot exit status: 0
[2025-10-10 18:48:09] 2025-10-10 22:48:09,310 [wrapper] pandaids: 6826993070
[2025-10-10 18:48:09] 2025-10-10 22:48:09,358 [wrapper] cleanup supervisor_pilot 2567076 2421675
[2025-10-10 18:48:09] 2025-10-10 22:48:09,362 [wrapper] Test setup, not cleaning
[2025-10-10 18:48:09] 2025-10-10 22:48:09,366 [wrapper] apfmon messages muted
[2025-10-10 18:48:09] 2025-10-10 22:48:09,370 [wrapper] ==== wrapper stdout END ====
[2025-10-10 18:48:09] 2025-10-10 22:48:09,373 [wrapper] ==== wrapper stderr END ====
[2025-10-10 18:48:09]  *** Error codes and diagnostics ***
[2025-10-10 18:48:09]     "exeErrorCode": 0,
[2025-10-10 18:48:09]     "exeErrorDiag": "",
[2025-10-10 18:48:09]     "pilotErrorCode": 0,
[2025-10-10 18:48:09]     "pilotErrorDiag": "",
[2025-10-10 18:48:09]  *** Listing of results directory ***
[2025-10-10 18:48:09] total 390424
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas    552446 Oct  2 04:08 pilot3.tar.gz
[2025-10-10 18:48:09] -rwx------. 1 boincer umatlas     36292 Oct  2 04:10 runpilot2-wrapper.sh
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas      5112 Oct  2 04:10 queuedata.json
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas       100 Oct 10 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 18:48:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 17:20 run_atlas
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas       105 Oct 10 17:20 job.xml
[2025-10-10 18:48:09] -rw-r--r--. 2 boincer umatlas 214631112 Oct 10 17:20 EVNT.46376901._000746.pool.root.1
[2025-10-10 18:48:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 17:20 start_atlas.sh
[2025-10-10 18:48:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 17:20 shared
[2025-10-10 18:48:09] -rw-r--r--. 2 boincer umatlas    565595 Oct 10 17:20 input.tar.gz
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas         0 Oct 10 17:20 boinc_lockfile
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas      2518 Oct 10 17:20 pandaJob.out
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas    975517 Oct 10 17:20 agis_schedconf.cvmfs.json
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas   1560580 Oct 10 17:20 agis_ddmendpoints.agis.ALL.json
[2025-10-10 18:48:09] drwx------. 4 boincer umatlas      4096 Oct 10 17:20 pilot3
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas      6658 Oct 10 18:46 init_data.xml
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas 178994790 Oct 10 18:46 HITS.46376905._024490.pool.root.1
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas       529 Oct 10 18:46 boinc_task_state.xml
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas        95 Oct 10 18:47 pilot_heartbeat.json
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas      1034 Oct 10 18:47 memory_monitor_summary.json
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas    383590 Oct 10 18:47 log.46376905._024490.job.log.tgz.1
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas      7817 Oct 10 18:47 heartbeat.json
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas        27 Oct 10 18:48 wrapper_checkpoint.txt
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 18:48 boinc_mmap_file
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas       822 Oct 10 18:48 pilotlog.txt
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas    757491 Oct 10 18:48 log.46376905._024490.job.log.1
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas       357 Oct 10 18:48 output.list
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas       620 Oct 10 18:48 runtime_log
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas   1157120 Oct 10 18:48 result.tar.gz
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas       651 Oct 10 18:48 sMJODmHZTO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmU38LDm5PMOam.diag
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas      8700 Oct 10 18:48 runtime_log.err
[2025-10-10 18:48:09] -rw-r--r--. 1 boincer umatlas     22378 Oct 10 18:48 stderr.txt
[2025-10-10 18:48:09] HITS file was successfully produced:
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas 178994790 Oct 10 18:46 shared/HITS.pool.root.1
[2025-10-10 18:48:09]  *** Contents of shared directory: ***
[2025-10-10 18:48:09] total 386116
[2025-10-10 18:48:09] -rw-r--r--. 2 boincer umatlas 214631112 Oct 10 17:20 ATLAS.root_0
[2025-10-10 18:48:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 17:20 start_atlas.sh
[2025-10-10 18:48:09] -rw-r--r--. 2 boincer umatlas    565595 Oct 10 17:20 input.tar.gz
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas 178994790 Oct 10 18:46 HITS.pool.root.1
[2025-10-10 18:48:09] -rw-------. 1 boincer umatlas   1157120 Oct 10 18:48 result.tar.gz
18:48:11 (2417747): run_atlas exited; CPU time 42697.145395
18:48:11 (2417747): called boinc_finish(0)

</stderr_txt>
]]>

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