Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:49:09 (2638810): wrapper (7.7.26015): starting
23:49:09 (2638810): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 23:49:10] Arguments: --nthreads 4
[2025-10-11 23:49:10] Threads: 4
[2025-10-11 23:49:10] Checking for CVMFS
[2025-10-11 23:49:10] No cvmfs_config command found, will try listing directly
[2025-10-11 23:49:10] CVMFS is ok
[2025-10-11 23:49:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:49:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:49:10] Further information can be found at the LHC@home message board.
[2025-10-11 23:49:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:49:10] Checking for apptainer binary...
[2025-10-11 23:49:10] which: no apptainer in ((null))
[2025-10-11 23:49:10] apptainer is not installed, using version from CVMFS
[2025-10-11 23:49:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:49:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-11 23:49:10] apptainer works
[2025-10-11 23:49:10] Set ATHENA_PROC_NUMBER=4
[2025-10-11 23:49:10] Set ATHENA_CORE_NUMBER=4
[2025-10-11 23:49:10] Starting ATLAS job with PandaID=6837667925
[2025-10-11 23:49:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:50:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:50:05] 2025-10-12 00:43:11,660 | INFO     | fitting pss+swap vs Time
[2025-10-12 02:50:05] 2025-10-12 00:43:11,661 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 02:50:05] 2025-10-12 00:43:11,662 | INFO     | sum of deviations: 11240204223.000015
[2025-10-12 02:50:05] 2025-10-12 00:43:11,662 | INFO     | mean x: 1760224586.0
[2025-10-12 02:50:05] 2025-10-12 00:43:11,662 | INFO     | mean y: 2288910.9590643276
[2025-10-12 02:50:05] 2025-10-12 00:43:11,662 | INFO     | -- intersect: -12758877793.033175
[2025-10-12 02:50:05] 2025-10-12 00:43:11,662 | INFO     | intersect: -12758877793.033175
[2025-10-12 02:50:05] 2025-10-12 00:43:11,663 | INFO     | chi2: 2.087831680735155
[2025-10-12 02:50:05] 2025-10-12 00:43:11,663 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 02:50:05] 2025-10-12 00:43:11,664 | INFO     | sum of deviations: 21027449903.499996
[2025-10-12 02:50:05] 2025-10-12 00:43:11,664 | INFO     | mean x: 1760224433.5
[2025-10-12 02:50:05] 2025-10-12 00:43:11,664 | INFO     | mean y: 2299926.8855421687
[2025-10-12 02:50:05] 2025-10-12 00:43:11,664 | INFO     | -- intersect: -26093326386.63855
[2025-10-12 02:50:05] 2025-10-12 00:43:11,664 | INFO     | intersect: -26093326386.63855
[2025-10-12 02:50:05] 2025-10-12 00:43:11,665 | INFO     | chi2: 1.3249439491328463
[2025-10-12 02:50:05] 2025-10-12 00:43:11,665 | INFO     | current chi2=1.3249439491328463 (change=36.53971431900512 %)
[2025-10-12 02:50:05] 2025-10-12 00:43:11,665 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 02:50:05] 2025-10-12 00:43:11,666 | INFO     | sum of deviations: 20262262761.999992
[2025-10-12 02:50:05] 2025-10-12 00:43:11,666 | INFO     | mean x: 1760224281.0
[2025-10-12 02:50:05] 2025-10-12 00:43:11,666 | INFO     | mean y: 2298988.732919255
[2025-10-12 02:50:05] 2025-10-12 00:43:11,666 | INFO     | -- intersect: -27560077030.22324
[2025-10-12 02:50:05] 2025-10-12 00:43:11,667 | INFO     | intersect: -27560077030.22324
[2025-10-12 02:50:05] 2025-10-12 00:43:11,667 | INFO     | chi2: 1.3260195543043303
[2025-10-12 02:50:05] 2025-10-12 00:43:11,667 | INFO     | current chi2=1.3260195543043303 (change=-0.08118118296158407 %)
[2025-10-12 02:50:05] 2025-10-12 00:43:11,667 | INFO     | right removable region: 160
[2025-10-12 02:50:05] 2025-10-12 00:43:11,668 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 02:50:05] 2025-10-12 00:43:11,669 | INFO     | sum of deviations: -9279747762.5
[2025-10-12 02:50:05] 2025-10-12 00:43:11,669 | INFO     | mean x: 1760224738.5
[2025-10-12 02:50:05] 2025-10-12 00:43:11,669 | INFO     | mean y: 2312212.295180723
[2025-10-12 02:50:05] 2025-10-12 00:43:11,669 | INFO     | -- intersect: 11518728751.881102
[2025-10-12 02:50:05] 2025-10-12 00:43:11,669 | INFO     | intersect: 11518728751.881102
[2025-10-12 02:50:05] 2025-10-12 00:43:11,669 | INFO     | chi2: 0.7900063675290914
[2025-10-12 02:50:05] 2025-10-12 00:43:11,669 | INFO     | current chi2=0.7900063675290914 (change=62.161395728466054 %)
[2025-10-12 02:50:05] 2025-10-12 00:43:11,670 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 02:50:05] 2025-10-12 00:43:11,671 | INFO     | sum of deviations: -8323696684.0
[2025-10-12 02:50:05] 2025-10-12 00:43:11,671 | INFO     | mean x: 1760224891.0
[2025-10-12 02:50:05] 2025-10-12 00:43:11,671 | INFO     | mean y: 2311036.6211180124
[2025-10-12 02:50:05] 2025-10-12 00:43:11,671 | INFO     | -- intersect: 11324883449.780054
[2025-10-12 02:50:05] 2025-10-12 00:43:11,671 | INFO     | intersect: 11324883449.780054
[2025-10-12 02:50:05] 2025-10-12 00:43:11,671 | INFO     | chi2: 0.7896990732109038
[2025-10-12 02:50:05] 2025-10-12 00:43:11,671 | INFO     | current chi2=0.7896990732109038 (change=0.03889770143861904 %)
[2025-10-12 02:50:05] 2025-10-12 00:43:11,672 | INFO     | left removable region: 20
[2025-10-12 02:50:05] 2025-10-12 00:43:11,672 | INFO     | sum of square deviations: 850825255.0
[2025-10-12 02:50:05] 2025-10-12 00:43:11,673 | INFO     | sum of deviations: 2387122149.9999995
[2025-10-12 02:50:05] 2025-10-12 00:43:11,673 | INFO     | mean x: 1760224860.5
[2025-10-12 02:50:05] 2025-10-12 00:43:11,673 | INFO     | mean y: 2321501.814285714
[2025-10-12 02:50:05] 2025-10-12 00:43:11,673 | INFO     | -- intersect: -4936262218.858427
[2025-10-12 02:50:05] 2025-10-12 00:43:11,673 | INFO     | intersect: -4936262218.858427
[2025-10-12 02:50:05] 2025-10-12 00:43:11,673 | INFO     | chi2: 0.000237035902766313
[2025-10-12 02:50:05] 2025-10-12 00:43:11,673 | INFO     | -- intersect: -4936262218.858427
[2025-10-12 02:50:05] 2025-10-12 00:43:11,674 | INFO     | current memory leak: 2.81 B/s (using 140 data points, chi2=0.00)
[2025-10-12 02:50:05] 2025-10-12 00:43:11,674 | INFO     | could have reported an average CPU frequency of 2691 MHz (9 samples)
[2025-10-12 02:50:05] 2025-10-12 00:43:11,674 | INFO     | ..............................
[2025-10-12 02:50:05] 2025-10-12 00:43:11,674 | INFO     | . Timing measurements:
[2025-10-12 02:50:05] 2025-10-12 00:43:11,674 | INFO     | . get job = 0 s
[2025-10-12 02:50:05] 2025-10-12 00:43:11,674 | INFO     | . initial setup = 1 s
[2025-10-12 02:50:05] 2025-10-12 00:43:11,675 | INFO     | . payload setup = 9 s
[2025-10-12 02:50:05] 2025-10-12 00:43:11,675 | INFO     | . stage-in = 0 s
[2025-10-12 02:50:05] 2025-10-12 00:43:11,675 | INFO     | . payload execution = 10387 s
[2025-10-12 02:50:05] 2025-10-12 00:43:11,675 | INFO     | . stage-out = 1 s
[2025-10-12 02:50:05] 2025-10-12 00:43:11,675 | INFO     | . log creation = 0 s
[2025-10-12 02:50:05] 2025-10-12 00:43:11,675 | INFO     | ..............................
[2025-10-12 02:50:05] 2025-10-12 00:43:12,169 | INFO     | 
[2025-10-12 02:50:05] 2025-10-12 00:43:12,169 | INFO     | job summary report
[2025-10-12 02:50:05] 2025-10-12 00:43:12,169 | INFO     | --------------------------------------------------
[2025-10-12 02:50:05] 2025-10-12 00:43:12,169 | INFO     | PanDA job id: 6837667925
[2025-10-12 02:50:05] 2025-10-12 00:43:12,169 | INFO     | task id: 46676269
[2025-10-12 02:50:05] 2025-10-12 00:43:12,169 | INFO     | errors: (none)
[2025-10-12 02:50:05] 2025-10-12 00:43:12,169 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:50:05] 2025-10-12 00:43:12,169 | INFO     | pilot state: finished 
[2025-10-12 02:50:05] 2025-10-12 00:43:12,169 | INFO     | transexitcode: 0
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | exeerrorcode: 0
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | exeerrordiag: 
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | exitcode: 0
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | exitmsg: OK
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | cpuconsumptiontime: 38985 s
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | nevents: 400
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | neventsw: 0
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | pid: 2707082
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | pgrp: 2707082
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | corecount: 4
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | event service: False
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | sizes: {0: 2348641, 1: 2348896, 8: 2349158, 12: 2349186, 10400: 2378265, 10401: 2387469, 10408: 2387671}
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | --------------------------------------------------
[2025-10-12 02:50:05] 2025-10-12 00:43:12,170 | INFO     | 
[2025-10-12 02:50:05] 2025-10-12 00:43:12,171 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-10-12 02:50:05] 2025-10-12 00:43:12,204 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,204 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,204 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,204 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,206 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:50:05] 2025-10-12 00:43:12,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,206 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:50:05] 2025-10-12 00:43:12,206 | INFO     | job 6837667925 has completed (purged errors)
[2025-10-12 02:50:05] 2025-10-12 00:43:12,206 | INFO     | overall cleanup function is called
[2025-10-12 02:50:05] 2025-10-12 00:43:13,215 | INFO     | --- collectZombieJob: --- 10, [2707082]
[2025-10-12 02:50:05] 2025-10-12 00:43:13,215 | INFO     | zombie collector waiting for pid 2707082
[2025-10-12 02:50:05] 2025-10-12 00:43:13,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:50:05] 2025-10-12 00:43:13,215 | INFO     | collected zombie processes
[2025-10-12 02:50:05] 2025-10-12 00:43:13,215 | INFO     | will attempt to kill all subprocesses of pid=2707082
[2025-10-12 02:50:05] 2025-10-12 00:43:14,050 | INFO     | process IDs to be killed: [2707082] (in reverse order)
[2025-10-12 02:50:05] 2025-10-12 00:43:14,328 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:50:05] 2025-10-12 00:43:14,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:50:05] 2025-10-12 00:43:14,365 | INFO     | did not find any defunct processes belonging to 2707082
[2025-10-12 02:50:05] 2025-10-12 00:43:14,399 | INFO     | did not find any defunct processes belonging to 2707082
[2025-10-12 02:50:05] 2025-10-12 00:43:14,399 | INFO     | ready for new job
[2025-10-12 02:50:05] 2025-10-12 00:43:14,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:50:05] 2025-10-12 00:43:14,402 | INFO     | ***************************************
[2025-10-12 02:50:05] 2025-10-12 00:43:14,402 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:50:05] 2025-10-12 00:43:14,402 | INFO     | ***************************************
[2025-10-12 02:50:05] 2025-10-12 00:43:14,402 | INFO     | 
[2025-10-12 02:50:05] 2025-10-12 00:43:14,411 | INFO     | architecture information:
[2025-10-12 02:50:05] 2025-10-12 00:43:14,411 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:50:05] 2025-10-12 00:43:14,437 | INFO     | cat /etc/os-release:
[2025-10-12 02:50:05] NAME="CentOS Linux"
[2025-10-12 02:50:05] VERSION="7 (Core)"
[2025-10-12 02:50:05] ID="centos"
[2025-10-12 02:50:05] ID_LIKE="rhel fedora"
[2025-10-12 02:50:05] VERSION_ID="7"
[2025-10-12 02:50:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:50:05] ANSI_COLOR="0;31"
[2025-10-12 02:50:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:50:05] HOME_URL="https://www.centos.org/"
[2025-10-12 02:50:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:50:05] 
[2025-10-12 02:50:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:50:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:50:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:50:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:50:05] 
[2025-10-12 02:50:05] 2025-10-12 00:43:14,438 | INFO     | ***************************************
[2025-10-12 02:50:05] 2025-10-12 00:43:14,941 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-10-12 02:50:05] 2025-10-12 00:43:14,970 | INFO     | sufficient remaining disk space (3340611092480 B)
[2025-10-12 02:50:05] 2025-10-12 00:43:14,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:50:05] 2025-10-12 00:43:14,971 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:50:05] 2025-10-12 00:43:14,971 | INFO     | update_server=False
[2025-10-12 02:50:05] 2025-10-12 00:43:14,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:50:05] 2025-10-12 00:43:15,287 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 02:50:05] 2025-10-12 00:43:15,287 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 02:50:05] 2025-10-12 00:43:15,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:50:05] 2025-10-12 00:43:15,287 | INFO     | will abort loop
[2025-10-12 02:50:05] 2025-10-12 00:43:15,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:50:05] 2025-10-12 00:43:15,398 | INFO     | all data control threads have been joined
[2025-10-12 02:50:05] 2025-10-12 00:43:15,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:50:05] 2025-10-12 00:43:15,977 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:16,100 | INFO     | all job control threads have been joined
[2025-10-12 02:50:05] 2025-10-12 00:43:16,201 | INFO     | all payload control threads have been joined
[2025-10-12 02:50:05] 2025-10-12 00:43:16,293 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:16,403 | INFO     | [data] control thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:16,545 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:16,624 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:16,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:50:05] 2025-10-12 00:43:17,050 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:17,106 | INFO     | [job] control thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:17,203 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:17,206 | INFO     | [payload] control thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:17,303 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:17,329 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:17,467 | INFO     | [job] validate thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:17,506 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:17,792 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:19,418 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:25,311 | INFO     | job.realtimelogging is not enabled
[2025-10-12 02:50:05] 2025-10-12 00:43:26,316 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:50:05] 2025-10-12 00:43:42,157 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:50:05] 2025-10-12 00:43:42,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22502564398912)>', '<ExcThread(monitor, started 22502327682816)>']
[2025-10-12 02:50:05] 2025-10-12 00:43:45,223 | INFO     | PID=2656429 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 02:50:05] 2025-10-12 00:43:45,223 | INFO     | .. there are 13 such processes running
[2025-10-12 02:50:05] 2025-10-12 00:43:45,223 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:50:05] 2025-10-12 00:43:45,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:50:05] 2025-10-12 00:43:45,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:50:05] 2025-10-12 00:43:45,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:50:05] 2025-10-12 00:43:45,223 | INFO     | [monitor] control thread has ended
[2025-10-12 02:50:05] 2025-10-12 00:43:47,272 | INFO     | all workflow threads have been joined
[2025-10-12 02:50:05] 2025-10-12 00:43:47,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:50:05] 2025-10-12 00:43:47,272 | INFO     | traces error code: 0
[2025-10-12 02:50:05] 2025-10-12 00:43:47,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:50:05] 2025-10-12 00:43:47,482 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:50:05] 2025-10-12 00:43:47,487 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:50:05] 2025-10-12 00:43:47,491 [wrapper] pilotpid: 2656429
[2025-10-12 02:50:05] 2025-10-12 00:43:47,495 [wrapper] Pilot exit status: 0
[2025-10-12 02:50:05] 2025-10-12 00:43:47,509 [wrapper] pandaids: 6837667925
[2025-10-12 02:50:05] 2025-10-12 00:43:47,690 [wrapper] cleanup supervisor_pilot 3205105 2656430
[2025-10-12 02:50:05] 2025-10-12 00:43:47,695 [wrapper] Test setup, not cleaning
[2025-10-12 02:50:05] 2025-10-12 00:43:47,699 [wrapper] apfmon messages muted
[2025-10-12 02:50:05] 2025-10-12 00:43:47,703 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:50:05] 2025-10-12 00:43:47,708 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:50:05]  *** Error codes and diagnostics ***
[2025-10-12 02:50:05]     "exeErrorCode": 0,
[2025-10-12 02:50:05]     "exeErrorDiag": "",
[2025-10-12 02:50:05]     "pilotErrorCode": 0,
[2025-10-12 02:50:05]     "pilotErrorDiag": "",
[2025-10-12 02:50:05]  *** Listing of results directory ***
[2025-10-12 02:50:05] total 411648
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc    557409 Oct 10 17:29 pilot3.tar.gz
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc      5112 Oct 10 17:44 queuedata.json
[2025-10-12 02:50:05] -rwx------ 1 boinc boinc     36292 Oct 10 17:44 runpilot2-wrapper.sh
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc       100 Oct 11 23:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:50:05] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 23:49 run_atlas
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc       105 Oct 11 23:49 job.xml
[2025-10-12 02:50:05] -rw-r--r-- 2 boinc boinc 218460866 Oct 11 23:49 EVNT.46676267._001666.pool.root.1
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc      6686 Oct 11 23:49 init_data.xml
[2025-10-12 02:50:05] -rw-r--r-- 2 boinc boinc     15120 Oct 11 23:49 start_atlas.sh
[2025-10-12 02:50:05] drwxrwx--x 2 boinc boinc      4096 Oct 11 23:49 shared
[2025-10-12 02:50:05] -rw-r--r-- 2 boinc boinc    569681 Oct 11 23:49 input.tar.gz
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc         0 Oct 11 23:49 boinc_lockfile
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc      2550 Oct 11 23:49 pandaJob.out
[2025-10-12 02:50:05] -rw------- 1 boinc boinc    975528 Oct 11 23:49 agis_schedconf.cvmfs.json
[2025-10-12 02:50:05] -rw------- 1 boinc boinc   1560580 Oct 11 23:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:50:05] drwx------ 5 boinc boinc      4096 Oct 11 23:49 pilot3
[2025-10-12 02:50:05] -rw------- 1 boinc boinc 195638842 Oct 12 02:42 HITS.46676269._041097.pool.root.1
[2025-10-12 02:50:05] -rw------- 1 boinc boinc        95 Oct 12 02:42 pilot_heartbeat.json
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc       529 Oct 12 02:42 boinc_task_state.xml
[2025-10-12 02:50:05] -rw------- 1 boinc boinc      1028 Oct 12 02:43 memory_monitor_summary.json
[2025-10-12 02:50:05] -rw------- 1 boinc boinc    342383 Oct 12 02:43 log.46676269._041097.job.log.tgz.1
[2025-10-12 02:50:05] -rw------- 1 boinc boinc      7784 Oct 12 02:43 heartbeat.json
[2025-10-12 02:50:05] -rw------- 1 boinc boinc      5094 Oct 12 02:43 pilotlog.txt
[2025-10-12 02:50:05] -rw------- 1 boinc boinc   1415674 Oct 12 02:43 log.46676269._041097.job.log.1
[2025-10-12 02:50:05] -rw------- 1 boinc boinc       357 Oct 12 02:43 output.list
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc       620 Oct 12 02:43 runtime_log
[2025-10-12 02:50:05] -rw------- 1 boinc boinc   1781760 Oct 12 02:43 result.tar.gz
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc      9070 Oct 12 02:43 runtime_log.err
[2025-10-12 02:50:05] -rw------- 1 boinc boinc       665 Oct 12 02:43 OmQNDmiTUR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqCQMDmPZLQKm.diag
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc        26 Oct 12 02:50 wrapper_checkpoint.txt
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc      8192 Oct 12 02:50 boinc_mmap_file
[2025-10-12 02:50:05] -rw-r--r-- 1 boinc boinc     20694 Oct 12 02:50 stderr.txt
[2025-10-12 02:50:05] HITS file was successfully produced:
[2025-10-12 02:50:05] -rw------- 1 boinc boinc 195638842 Oct 12 02:42 shared/HITS.pool.root.1
[2025-10-12 02:50:05]  *** Contents of shared directory: ***
[2025-10-12 02:50:05] total 406724
[2025-10-12 02:50:05] -rw-r--r-- 2 boinc boinc 218460866 Oct 11 23:49 ATLAS.root_0
[2025-10-12 02:50:05] -rw-r--r-- 2 boinc boinc     15120 Oct 11 23:49 start_atlas.sh
[2025-10-12 02:50:05] -rw-r--r-- 2 boinc boinc    569681 Oct 11 23:49 input.tar.gz
[2025-10-12 02:50:05] -rw------- 1 boinc boinc 195638842 Oct 12 02:42 HITS.pool.root.1
[2025-10-12 02:50:05] -rw------- 1 boinc boinc   1781760 Oct 12 02:43 result.tar.gz
02:50:06 (2638810): run_atlas exited; CPU time 39662.641317
02:50:06 (2638810): called boinc_finish(0)

</stderr_txt>
]]>

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