Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:48:11 (3978312): wrapper (7.7.26015): starting
08:48:11 (3978312): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 08:48:11] Arguments: --nthreads 4
[2025-10-11 08:48:11] Threads: 4
[2025-10-11 08:48:11] Checking for CVMFS
[2025-10-11 08:48:11] No cvmfs_config command found, will try listing directly
[2025-10-11 08:48:11] CVMFS is ok
[2025-10-11 08:48:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 08:48:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 08:48:11] Further information can be found at the LHC@home message board.
[2025-10-11 08:48:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 08:48:11] Checking for apptainer binary...
[2025-10-11 08:48:11] which: no apptainer in ((null))
[2025-10-11 08:48:11] apptainer is not installed, using version from CVMFS
[2025-10-11 08:48:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 08:48:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-11 08:48:11] apptainer works
[2025-10-11 08:48:11] Set ATHENA_PROC_NUMBER=4
[2025-10-11 08:48:11] Set ATHENA_CORE_NUMBER=4
[2025-10-11 08:48:11] Starting ATLAS job with PandaID=6837667237
[2025-10-11 08:48:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:20:31]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:20:31] 2025-10-11 09:19:09,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:20:31] 2025-10-11 09:19:09,773 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:20:31] 2025-10-11 09:19:09,773 | INFO     | sum of square deviations: 1005179777.0
[2025-10-11 11:20:31] 2025-10-11 09:19:09,774 | INFO     | sum of deviations: 5654950069.500002
[2025-10-11 11:20:31] 2025-10-11 09:19:09,774 | INFO     | mean x: 1760169822.5
[2025-10-11 11:20:31] 2025-10-11 09:19:09,774 | INFO     | mean y: 2285301.668918919
[2025-10-11 11:20:31] 2025-10-11 09:19:09,775 | INFO     | -- intersect: -9900095036.488422
[2025-10-11 11:20:31] 2025-10-11 09:19:09,775 | INFO     | intersect: -9900095036.488422
[2025-10-11 11:20:31] 2025-10-11 09:19:09,775 | INFO     | chi2: 2.0150613909993274
[2025-10-11 11:20:31] 2025-10-11 09:19:09,775 | INFO     | sum of square deviations: 906703512.0
[2025-10-11 11:20:31] 2025-10-11 09:19:09,776 | INFO     | sum of deviations: 14514788411.0
[2025-10-11 11:20:31] 2025-10-11 09:19:09,776 | INFO     | mean x: 1760169670.0
[2025-10-11 11:20:31] 2025-10-11 09:19:09,776 | INFO     | mean y: 2298630.6503496505
[2025-10-11 11:20:31] 2025-10-11 09:19:09,776 | INFO     | -- intersect: -28175038270.973667
[2025-10-11 11:20:31] 2025-10-11 09:19:09,776 | INFO     | intersect: -28175038270.973667
[2025-10-11 11:20:31] 2025-10-11 09:19:09,777 | INFO     | chi2: 1.203255247914831
[2025-10-11 11:20:31] 2025-10-11 09:19:09,777 | INFO     | current chi2=1.203255247914831 (change=40.28691863734723 %)
[2025-10-11 11:20:31] 2025-10-11 09:19:09,777 | INFO     | sum of square deviations: 814878534.5
[2025-10-11 11:20:31] 2025-10-11 09:19:09,778 | INFO     | sum of deviations: 13988906770.500002
[2025-10-11 11:20:31] 2025-10-11 09:19:09,778 | INFO     | mean x: 1760169517.5
[2025-10-11 11:20:31] 2025-10-11 09:19:09,778 | INFO     | mean y: 2297756.9782608696
[2025-10-11 11:20:31] 2025-10-11 09:19:09,778 | INFO     | -- intersect: -30214288197.996937
[2025-10-11 11:20:31] 2025-10-11 09:19:09,778 | INFO     | intersect: -30214288197.996937
[2025-10-11 11:20:31] 2025-10-11 09:19:09,779 | INFO     | chi2: 1.2044382146468122
[2025-10-11 11:20:31] 2025-10-11 09:19:09,779 | INFO     | current chi2=1.2044382146468122 (change=-0.09831386433021257 %)
[2025-10-11 11:20:31] 2025-10-11 09:19:09,779 | INFO     | right removable region: 137
[2025-10-11 11:20:31] 2025-10-11 09:19:09,779 | INFO     | sum of square deviations: 906703512.0
[2025-10-11 11:20:31] 2025-10-11 09:19:09,780 | INFO     | sum of deviations: -10892296090.999998
[2025-10-11 11:20:31] 2025-10-11 09:19:09,780 | INFO     | mean x: 1760169975.0
[2025-10-11 11:20:31] 2025-10-11 09:19:09,780 | INFO     | mean y: 2310452.601398601
[2025-10-11 11:20:31] 2025-10-11 09:19:09,780 | INFO     | -- intersect: 21147362042.726997
[2025-10-11 11:20:31] 2025-10-11 09:19:09,780 | INFO     | intersect: 21147362042.726997
[2025-10-11 11:20:31] 2025-10-11 09:19:09,781 | INFO     | chi2: 0.8439738954576469
[2025-10-11 11:20:31] 2025-10-11 09:19:09,781 | INFO     | current chi2=0.8439738954576469 (change=58.11671548929357 %)
[2025-10-11 11:20:31] 2025-10-11 09:19:09,781 | INFO     | sum of square deviations: 814878534.5
[2025-10-11 11:20:31] 2025-10-11 09:19:09,782 | INFO     | sum of deviations: -11059774946.0
[2025-10-11 11:20:31] 2025-10-11 09:19:09,782 | INFO     | mean x: 1760170127.5
[2025-10-11 11:20:31] 2025-10-11 09:19:09,782 | INFO     | mean y: 2310701.072463768
[2025-10-11 11:20:31] 2025-10-11 09:19:09,782 | INFO     | -- intersect: 23891865588.86553
[2025-10-11 11:20:31] 2025-10-11 09:19:09,782 | INFO     | intersect: 23891865588.86553
[2025-10-11 11:20:31] 2025-10-11 09:19:09,782 | INFO     | chi2: 0.8411369179317248
[2025-10-11 11:20:31] 2025-10-11 09:19:09,783 | INFO     | current chi2=0.8411369179317248 (change=0.336145174772697 %)
[2025-10-11 11:20:31] 2025-10-11 09:19:09,783 | INFO     | left removable region: 20
[2025-10-11 11:20:31] 2025-10-11 09:19:09,783 | INFO     | sum of square deviations: 496597218.0
[2025-10-11 11:20:31] 2025-10-11 09:19:09,783 | INFO     | sum of deviations: -954202443.0000001
[2025-10-11 11:20:31] 2025-10-11 09:19:09,784 | INFO     | mean x: 1760170097.0
[2025-10-11 11:20:31] 2025-10-11 09:19:09,784 | INFO     | mean y: 2323443.316239316
[2025-10-11 11:20:31] 2025-10-11 09:19:09,784 | INFO     | -- intersect: 3384457989.734393
[2025-10-11 11:20:31] 2025-10-11 09:19:09,784 | INFO     | intersect: 3384457989.734393
[2025-10-11 11:20:31] 2025-10-11 09:19:09,784 | INFO     | chi2: 0.0027081135719431316
[2025-10-11 11:20:31] 2025-10-11 09:19:09,784 | INFO     | -- intersect: 3384457989.734393
[2025-10-11 11:20:31] 2025-10-11 09:19:09,784 | INFO     | current memory leak: -1.92 B/s (using 117 data points, chi2=0.00)
[2025-10-11 11:20:31] 2025-10-11 09:19:09,785 | INFO     | could have reported an average CPU frequency of 2709 MHz (8 samples)
[2025-10-11 11:20:31] 2025-10-11 09:19:09,785 | INFO     | ..............................
[2025-10-11 11:20:31] 2025-10-11 09:19:09,785 | INFO     | . Timing measurements:
[2025-10-11 11:20:31] 2025-10-11 09:19:09,785 | INFO     | . get job = 0 s
[2025-10-11 11:20:31] 2025-10-11 09:19:09,785 | INFO     | . initial setup = 1 s
[2025-10-11 11:20:31] 2025-10-11 09:19:09,785 | INFO     | . payload setup = 8 s
[2025-10-11 11:20:31] 2025-10-11 09:19:09,785 | INFO     | . stage-in = 0 s
[2025-10-11 11:20:31] 2025-10-11 09:19:09,785 | INFO     | . payload execution = 9000 s
[2025-10-11 11:20:31] 2025-10-11 09:19:09,785 | INFO     | . stage-out = 1 s
[2025-10-11 11:20:31] 2025-10-11 09:19:09,786 | INFO     | . log creation = 0 s
[2025-10-11 11:20:31] 2025-10-11 09:19:09,786 | INFO     | ..............................
[2025-10-11 11:20:31] 2025-10-11 09:19:10,253 | INFO     | 
[2025-10-11 11:20:31] 2025-10-11 09:19:10,253 | INFO     | job summary report
[2025-10-11 11:20:31] 2025-10-11 09:19:10,253 | INFO     | --------------------------------------------------
[2025-10-11 11:20:31] 2025-10-11 09:19:10,253 | INFO     | PanDA job id: 6837667237
[2025-10-11 11:20:31] 2025-10-11 09:19:10,253 | INFO     | task id: 46676269
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | errors: (none)
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | pilot state: finished 
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | transexitcode: 0
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | exeerrorcode: 0
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | exeerrordiag: 
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | exitcode: 0
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | exitmsg: OK
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | cpuconsumptiontime: 33914 s
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | nevents: 400
[2025-10-11 11:20:31] 2025-10-11 09:19:10,254 | INFO     | neventsw: 0
[2025-10-11 11:20:31] 2025-10-11 09:19:10,255 | INFO     | pid: 4004516
[2025-10-11 11:20:31] 2025-10-11 09:19:10,255 | INFO     | pgrp: 4004516
[2025-10-11 11:20:31] 2025-10-11 09:19:10,255 | INFO     | corecount: 4
[2025-10-11 11:20:31] 2025-10-11 09:19:10,255 | INFO     | event service: False
[2025-10-11 11:20:31] 2025-10-11 09:19:10,255 | INFO     | sizes: {0: 2348867, 1: 2348867, 7: 2349157, 11: 2349185, 9012: 2377889, 9013: 2377888, 9014: 2387092, 9018: 2387148, 9026: 2387342}
[2025-10-11 11:20:31] 2025-10-11 09:19:10,255 | INFO     | --------------------------------------------------
[2025-10-11 11:20:31] 2025-10-11 09:19:10,255 | INFO     | 
[2025-10-11 11:20:31] 2025-10-11 09:19:10,255 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-10-11 11:20:31] 2025-10-11 09:19:10,288 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,288 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,290 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:20:31] 2025-10-11 09:19:10,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,290 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:20:31] 2025-10-11 09:19:10,290 | INFO     | job 6837667237 has completed (purged errors)
[2025-10-11 11:20:31] 2025-10-11 09:19:10,291 | INFO     | overall cleanup function is called
[2025-10-11 11:20:31] 2025-10-11 09:19:11,300 | INFO     | --- collectZombieJob: --- 10, [4004516]
[2025-10-11 11:20:31] 2025-10-11 09:19:11,300 | INFO     | zombie collector waiting for pid 4004516
[2025-10-11 11:20:31] 2025-10-11 09:19:11,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:20:31] 2025-10-11 09:19:11,300 | INFO     | collected zombie processes
[2025-10-11 11:20:31] 2025-10-11 09:19:11,300 | INFO     | will attempt to kill all subprocesses of pid=4004516
[2025-10-11 11:20:31] 2025-10-11 09:19:12,171 | INFO     | PID=3985327 has CPU usage=23.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 11:20:31] 2025-10-11 09:19:12,171 | INFO     | .. there are 13 such processes running
[2025-10-11 11:20:31] 2025-10-11 09:19:12,662 | INFO     | process IDs to be killed: [4004516] (in reverse order)
[2025-10-11 11:20:31] 2025-10-11 09:19:12,942 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:20:31] 2025-10-11 09:19:12,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:20:31] 2025-10-11 09:19:12,976 | INFO     | did not find any defunct processes belonging to 4004516
[2025-10-11 11:20:31] 2025-10-11 09:19:13,008 | INFO     | did not find any defunct processes belonging to 4004516
[2025-10-11 11:20:31] 2025-10-11 09:19:13,009 | INFO     | ready for new job
[2025-10-11 11:20:31] 2025-10-11 09:19:13,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:20:31] 2025-10-11 09:19:13,012 | INFO     | ***************************************
[2025-10-11 11:20:31] 2025-10-11 09:19:13,012 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:20:31] 2025-10-11 09:19:13,012 | INFO     | ***************************************
[2025-10-11 11:20:31] 2025-10-11 09:19:13,012 | INFO     | 
[2025-10-11 11:20:31] 2025-10-11 09:19:13,021 | INFO     | architecture information:
[2025-10-11 11:20:31] 2025-10-11 09:19:13,021 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:20:31] 2025-10-11 09:19:13,043 | INFO     | cat /etc/os-release:
[2025-10-11 11:20:31] NAME="CentOS Linux"
[2025-10-11 11:20:31] VERSION="7 (Core)"
[2025-10-11 11:20:31] ID="centos"
[2025-10-11 11:20:31] ID_LIKE="rhel fedora"
[2025-10-11 11:20:31] VERSION_ID="7"
[2025-10-11 11:20:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:20:31] ANSI_COLOR="0;31"
[2025-10-11 11:20:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:20:31] HOME_URL="https://www.centos.org/"
[2025-10-11 11:20:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:20:31] 
[2025-10-11 11:20:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:20:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:20:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:20:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:20:31] 
[2025-10-11 11:20:31] 2025-10-11 09:19:13,043 | INFO     | ***************************************
[2025-10-11 11:20:31] 2025-10-11 09:19:13,546 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-10-11 11:20:31] 2025-10-11 09:19:13,575 | INFO     | sufficient remaining disk space (3344629235712 B)
[2025-10-11 11:20:31] 2025-10-11 09:19:13,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:20:31] 2025-10-11 09:19:13,576 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:20:31] 2025-10-11 09:19:13,576 | INFO     | update_server=False
[2025-10-11 11:20:31] 2025-10-11 09:19:13,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:20:31] 2025-10-11 09:19:13,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:20:31] 2025-10-11 09:19:13,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:20:31] 2025-10-11 09:19:13,578 | INFO     | aborting loop
[2025-10-11 11:20:31] 2025-10-11 09:19:13,677 | INFO     | all job control threads have been joined
[2025-10-11 11:20:31] 2025-10-11 09:19:13,684 | INFO     | all payload control threads have been joined
[2025-10-11 11:20:31] 2025-10-11 09:19:14,551 | INFO     | all data control threads have been joined
[2025-10-11 11:20:31] 2025-10-11 09:19:14,582 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:14,583 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:14,683 | INFO     | [job] control thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:14,689 | INFO     | [payload] control thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:14,837 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:14,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:20:31] 2025-10-11 09:19:14,959 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:15,105 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:15,215 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:15,556 | INFO     | [data] control thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:15,583 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:15,600 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:15,625 | INFO     | [job] validate thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:15,906 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:15,969 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:16,108 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:16,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:20:31] 2025-10-11 09:19:20,398 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:20:31] 2025-10-11 09:19:39,602 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:20:31] 2025-10-11 09:19:41,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22811832645440)>', '<ExcThread(monitor, started 22811588384512)>']
[2025-10-11 11:20:31] 2025-10-11 09:19:45,242 | INFO     | PID=3985327 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 11:20:31] 2025-10-11 09:19:45,242 | INFO     | .. there are 13 such processes running
[2025-10-11 11:20:31] 2025-10-11 09:19:45,242 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:20:31] 2025-10-11 09:19:45,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:20:31] 2025-10-11 09:19:45,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:20:31] 2025-10-11 09:19:45,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:20:31] 2025-10-11 09:19:45,243 | INFO     | [monitor] control thread has ended
[2025-10-11 11:20:31] 2025-10-11 09:19:46,636 | INFO     | all workflow threads have been joined
[2025-10-11 11:20:31] 2025-10-11 09:19:46,636 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:20:31] 2025-10-11 09:19:46,636 | INFO     | traces error code: 0
[2025-10-11 11:20:31] 2025-10-11 09:19:46,637 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:20:31] 2025-10-11 09:19:46,816 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:20:31] 2025-10-11 09:19:46,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:20:31] 2025-10-11 09:19:46,824 [wrapper] pilotpid: 3985327
[2025-10-11 11:20:31] 2025-10-11 09:19:46,828 [wrapper] Pilot exit status: 0
[2025-10-11 11:20:31] 2025-10-11 09:19:46,844 [wrapper] pandaids: 6837667237
[2025-10-11 11:20:31] 2025-10-11 09:19:47,024 [wrapper] cleanup supervisor_pilot  405788 3985328
[2025-10-11 11:20:31] 2025-10-11 09:19:47,029 [wrapper] Test setup, not cleaning
[2025-10-11 11:20:31] 2025-10-11 09:19:47,034 [wrapper] apfmon messages muted
[2025-10-11 11:20:31] 2025-10-11 09:19:47,038 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:20:31] 2025-10-11 09:19:47,042 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:20:31]  *** Error codes and diagnostics ***
[2025-10-11 11:20:31]     "exeErrorCode": 0,
[2025-10-11 11:20:31]     "exeErrorDiag": "",
[2025-10-11 11:20:31]     "pilotErrorCode": 0,
[2025-10-11 11:20:31]     "pilotErrorDiag": "",
[2025-10-11 11:20:31]  *** Listing of results directory ***
[2025-10-11 11:20:31] total 402024
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc    557409 Oct 10 16:50 pilot3.tar.gz
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc      5112 Oct 10 17:24 queuedata.json
[2025-10-11 11:20:31] -rwx------ 1 boinc boinc     36292 Oct 10 17:24 runpilot2-wrapper.sh
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc       100 Oct 11 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:20:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 08:48 run_atlas
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc       105 Oct 11 08:48 job.xml
[2025-10-11 11:20:31] -rw-r--r-- 2 boinc boinc 220425184 Oct 11 08:48 EVNT.46676267._001648.pool.root.1
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc      6685 Oct 11 08:48 init_data.xml
[2025-10-11 11:20:31] -rw-r--r-- 2 boinc boinc     15120 Oct 11 08:48 start_atlas.sh
[2025-10-11 11:20:31] drwxrwx--x 2 boinc boinc      4096 Oct 11 08:48 shared
[2025-10-11 11:20:31] -rw-r--r-- 2 boinc boinc    569680 Oct 11 08:48 input.tar.gz
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc         0 Oct 11 08:48 boinc_lockfile
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc      2549 Oct 11 08:48 pandaJob.out
[2025-10-11 11:20:31] -rw------- 1 boinc boinc    975525 Oct 11 08:48 agis_schedconf.cvmfs.json
[2025-10-11 11:20:31] -rw------- 1 boinc boinc   1560580 Oct 11 08:48 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:20:31] drwx------ 5 boinc boinc      4096 Oct 11 08:48 pilot3
[2025-10-11 11:20:31] -rw------- 1 boinc boinc 184126432 Oct 11 11:18 HITS.46676269._040650.pool.root.1
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc       528 Oct 11 11:18 boinc_task_state.xml
[2025-10-11 11:20:31] -rw------- 1 boinc boinc      1024 Oct 11 11:18 memory_monitor_summary.json
[2025-10-11 11:20:31] -rw------- 1 boinc boinc    332388 Oct 11 11:18 log.46676269._040650.job.log.tgz.1
[2025-10-11 11:20:31] -rw------- 1 boinc boinc      7778 Oct 11 11:19 heartbeat.json
[2025-10-11 11:20:31] -rw------- 1 boinc boinc        95 Oct 11 11:19 pilot_heartbeat.json
[2025-10-11 11:20:31] -rw------- 1 boinc boinc      4835 Oct 11 11:19 pilotlog.txt
[2025-10-11 11:20:31] -rw------- 1 boinc boinc   1271968 Oct 11 11:19 log.46676269._040650.job.log.1
[2025-10-11 11:20:31] -rw------- 1 boinc boinc       357 Oct 11 11:19 output.list
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc       620 Oct 11 11:19 runtime_log
[2025-10-11 11:20:31] -rw------- 1 boinc boinc   1628160 Oct 11 11:19 result.tar.gz
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc      9069 Oct 11 11:19 runtime_log.err
[2025-10-11 11:20:31] -rw------- 1 boinc boinc       662 Oct 11 11:19 j81KDm69TR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9gdNDmyser8m.diag
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc        26 Oct 11 11:20 wrapper_checkpoint.txt
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc      8192 Oct 11 11:20 boinc_mmap_file
[2025-10-11 11:20:31] -rw-r--r-- 1 boinc boinc     20809 Oct 11 11:20 stderr.txt
[2025-10-11 11:20:31] HITS file was successfully produced:
[2025-10-11 11:20:31] -rw------- 1 boinc boinc 184126432 Oct 11 11:18 shared/HITS.pool.root.1
[2025-10-11 11:20:31]  *** Contents of shared directory: ***
[2025-10-11 11:20:31] total 397248
[2025-10-11 11:20:31] -rw-r--r-- 2 boinc boinc 220425184 Oct 11 08:48 ATLAS.root_0
[2025-10-11 11:20:31] -rw-r--r-- 2 boinc boinc     15120 Oct 11 08:48 start_atlas.sh
[2025-10-11 11:20:31] -rw-r--r-- 2 boinc boinc    569680 Oct 11 08:48 input.tar.gz
[2025-10-11 11:20:31] -rw------- 1 boinc boinc 184126432 Oct 11 11:18 HITS.pool.root.1
[2025-10-11 11:20:31] -rw------- 1 boinc boinc   1628160 Oct 11 11:19 result.tar.gz
11:20:32 (3978312): run_atlas exited; CPU time 34464.430438
11:20:32 (3978312): called boinc_finish(0)

</stderr_txt>
]]>

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