Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 23:18:44 (1164043): vboxwrapper version 26210
2025-10-10 23:18:44 (1164043): BOINC client version: 8.2.5
2025-10-10 23:18:44 (1164043): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-10-10 23:18:44 (1164043): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 23:18:45 (1164043): Create VM. (boinc_c88bd2071053373a, slot#45)
2025-10-10 23:18:45 (1164043): Setting Memory Size for VM. (4096MB)
2025-10-10 23:18:45 (1164043): Setting CPU Count for VM. (1)
2025-10-10 23:18:45 (1164043): Setting Chipset Options for VM.
2025-10-10 23:18:45 (1164043): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 23:18:46 (1164043): Setting Boot Options for VM.
2025-10-10 23:18:46 (1164043): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 23:18:46 (1164043): Enabling VM Network Access.
2025-10-10 23:18:46 (1164043): Disabling USB Support for VM.
2025-10-10 23:18:47 (1164043): Disabling COM Port Support for VM.
2025-10-10 23:18:47 (1164043): Disabling LPT Port Support for VM.
2025-10-10 23:18:47 (1164043): Disabling Audio Support for VM.
2025-10-10 23:18:47 (1164043): Disabling Clipboard Support for VM.
2025-10-10 23:18:47 (1164043): Disabling Drag and Drop Support for VM.
2025-10-10 23:18:47 (1164043): Adding storage controller(s) to VM.
2025-10-10 23:18:48 (1164043): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 23:18:48 (1164043): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 23:18:48 (1164043): forwarding host port 45133 to guest port 80
2025-10-10 23:18:48 (1164043): Enabling remote desktop for VM.
2025-10-10 23:18:49 (1164043): Enabling shared directory for VM.
2025-10-10 23:18:49 (1164043): Starting VM using VBoxManage interface. (boinc_c88bd2071053373a, slot#45)
2025-10-10 23:18:51 (1164043): Successfully started VM. (PID = '1164592')
2025-10-10 23:18:51 (1164043): Reporting VM Process ID to BOINC.
2025-10-10 23:18:51 (1164043): Guest Log: BIOS: VirtualBox 7.0.20
2025-10-10 23:18:51 (1164043): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 23:18:51 (1164043): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 23:18:51 (1164043): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 23:18:51 (1164043): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 23:18:51 (1164043): Detected: Web Application Enabled (http://localhost:45133)
2025-10-10 23:18:51 (1164043): Detected: Remote Desktop Enabled (localhost:42685)
2025-10-10 23:18:51 (1164043): Preference change detected
2025-10-10 23:18:51 (1164043): Setting CPU throttle for VM. (100%)
2025-10-10 23:18:51 (1164043): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 23:18:52 (1164043): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 23:18:52 (1164043): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 23:18:55 (1164043): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 23:18:55 (1164043): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 23:18:55 (1164043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 23:18:59 (1164043): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 23:18:59 (1164043): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-10 23:19:09 (1164043): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 23:19:09 (1164043): Guest Log: 00:00:00.000207 main     Log opened 2025-10-10T21:19:07.517893000Z
2025-10-10 23:19:09 (1164043): Guest Log: 00:00:00.000298 main     OS Product: Linux
2025-10-10 23:19:09 (1164043): Guest Log: 00:00:00.000316 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 23:19:09 (1164043): Guest Log: 00:00:00.000332 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 23:19:09 (1164043): Guest Log: 00:00:00.000346 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 23:19:09 (1164043): Guest Log: 00:00:00.000346 main     Process ID: 1242
2025-10-10 23:19:09 (1164043): Guest Log: 00:00:00.000347 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 23:19:09 (1164043): Guest Log: 00:00:00.002821 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 23:19:09 (1164043): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 23:19:09 (1164043): Guest Log: [INFO] Mounting shared directory
2025-10-10 23:19:09 (1164043): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 23:19:11 (1164043): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 23:19:11 (1164043): Guest Log: [INFO] Detected branch: prod
2025-10-10 23:19:11 (1164043): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 23:19:11 (1164043): Guest Log: Copying input files
2025-10-10 23:19:12 (1164043): Guest Log: Copied input files into RunAtlas.
2025-10-10 23:19:12 (1164043): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-10-10 23:19:19 (1164043): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 23:19:19 (1164043): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 23:19:19 (1164043): Guest Log: 2.6.3.0 1511 0 31540 151562 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-10-10 23:19:20 (1164043): Guest Log: copied the webapp to /var/www
2025-10-10 23:19:20 (1164043): Guest Log: core_number=1
2025-10-10 23:19:20 (1164043): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 23:19:20 (1164043): Guest Log:  *** Starting ATLAS job. (PandaID=6837378687 taskID=46676269) ***
2025-10-11 00:57:51 (1164043): Status Report: Elapsed Time: '6000.000000'
2025-10-11 00:57:51 (1164043): Status Report: CPU Time: '5911.390000'
2025-10-11 02:36:51 (1164043): Status Report: Elapsed Time: '12000.000000'
2025-10-11 02:36:51 (1164043): Status Report: CPU Time: '11859.180000'
2025-10-11 04:15:52 (1164043): Status Report: Elapsed Time: '18000.000000'
2025-10-11 04:15:52 (1164043): Status Report: CPU Time: '17807.130000'
2025-10-11 05:54:52 (1164043): Status Report: Elapsed Time: '24000.000000'
2025-10-11 05:54:52 (1164043): Status Report: CPU Time: '23755.060000'
2025-10-11 07:33:53 (1164043): Status Report: Elapsed Time: '30000.000000'
2025-10-11 07:33:53 (1164043): Status Report: CPU Time: '29703.500000'
2025-10-11 09:12:53 (1164043): Status Report: Elapsed Time: '36000.000000'
2025-10-11 09:12:53 (1164043): Status Report: CPU Time: '35651.760000'
2025-10-11 10:51:54 (1164043): Status Report: Elapsed Time: '42000.000000'
2025-10-11 10:51:54 (1164043): Status Report: CPU Time: '41600.490000'
2025-10-11 12:30:54 (1164043): Status Report: Elapsed Time: '48000.000000'
2025-10-11 12:30:54 (1164043): Status Report: CPU Time: '47548.090000'
2025-10-11 13:17:38 (1164043): Guest Log:  *** Job finished ***
2025-10-11 13:17:38 (1164043): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:16:39,969 | INFO     | [data] copytool_out thread has finished
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:16:43,857 | INFO     | [data] queue_monitor thread has finished
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:32,110 | INFO     | [monitor] cgroup control has ended
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:33,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761407498048)>', '<ExcThread(monitor, started 139760962094848)>']
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:33,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:33,498 | INFO     | [monitor] control thread has ended
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,116 | INFO     | all workflow threads have been joined
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,116 | INFO     | end of generic workflow (traces error code: 0)
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,117 | INFO     | traces error code: 0
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,235 [wrapper] ==== pilot stdout END ====
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,239 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,243 [wrapper] pilotpid: 5834
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,248 [wrapper] Pilot exit status: 0
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,289 [wrapper] pandaids: 6837378687
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,324 [wrapper] cleanup supervisor_pilot  6479 5835
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,329 [wrapper] Test setup, not cleaning
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,334 [wrapper] apfmon messages muted
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,338 [wrapper] ==== wrapper stdout END ====
2025-10-11 13:17:38 (1164043): Guest Log: 2025-10-11 11:17:38,343 [wrapper] ==== wrapper stderr END ====
2025-10-11 13:17:38 (1164043): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 13:17:38 (1164043): Guest Log:     "exeErrorCode": 0,
2025-10-11 13:17:38 (1164043): Guest Log:     "exeErrorDiag": "",
2025-10-11 13:17:38 (1164043): Guest Log:     "pilotErrorCode": 0,
2025-10-11 13:17:38 (1164043): Guest Log:     "pilotErrorDiag": "",
2025-10-11 13:17:38 (1164043): Guest Log:  *** Listing of results directory ***
2025-10-11 13:17:38 (1164043): Guest Log: total 215924
2025-10-11 13:17:38 (1164043): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 01:33 pilot3.tar.gz
2025-10-11 13:17:38 (1164043): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 01:40 queuedata.json
2025-10-11 13:17:38 (1164043): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 01:40 runpilot2-wrapper.sh
2025-10-11 13:17:38 (1164043): Guest Log: -rw-r--r--. 1 atlas atlas    569681 Oct 10 21:19 input.tar.gz
2025-10-11 13:17:38 (1164043): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 10 21:19 start_atlas.sh
2025-10-11 13:17:38 (1164043): Guest Log: -rw-r--r--. 1 atlas atlas      9775 Oct 10 21:19 init_data.xml
2025-10-11 13:17:38 (1164043): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 10 21:19 EVNT.46676267._001219.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 13:17:38 (1164043): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 10 21:19 pandaJob.out
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas    975517 Oct 10 21:19 agis_schedconf.cvmfs.json
2025-10-11 13:17:38 (1164043): Guest Log: drwx------. 5 atlas atlas      4096 Oct 10 21:19 pilot3
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas 201930284 Oct 11 11:15 HITS.46676269._029876.pool.root.1
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas        95 Oct 11 11:16 pilot_heartbeat.json
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas      1026 Oct 11 11:16 memory_monitor_summary.json
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 11:16 agis_ddmendpoints.agis.ALL.json
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas    843362 Oct 11 11:16 log.46676269._029876.job.log.tgz.1
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas      7821 Oct 11 11:16 heartbeat.json
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 11 11:17 pilotlog.txt
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas   6826569 Oct 11 11:17 log.46676269._029876.job.log.1
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 11:17 output.list
2025-10-11 13:17:38 (1164043): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 11:17 runtime_log
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas   7690240 Oct 11 11:17 result.tar.gz
2025-10-11 13:17:38 (1164043): Guest Log: -rw-r--r--. 1 atlas atlas      8522 Oct 11 11:17 runtime_log.err
2025-10-11 13:17:38 (1164043): Guest Log: -rw-------. 1 atlas atlas       659 Oct 11 11:17 cuGLDmwIHR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmX5OMDmfZzd6m.diag
2025-10-11 13:17:38 (1164043): Guest Log: Looking for outputfile HITS.46676269._029876.pool.root.1
2025-10-11 13:17:39 (1164043): Guest Log: HITS file was successfully produced
2025-10-11 13:17:39 (1164043): Guest Log: -rw-------. 1 atlas atlas 201930284 Oct 11 11:15 /home/atlas/RunAtlas/HITS.46676269._029876.pool.root.1
2025-10-11 13:17:39 (1164043): Guest Log: Successfully finished the ATLAS job!
2025-10-11 13:17:39 (1164043): Guest Log: Copying the results back to the shared directory!
2025-10-11 13:17:39 (1164043): Guest Log:  *** Contents of shared directory: ***
2025-10-11 13:17:39 (1164043): Guest Log: total 223844
2025-10-11 13:17:39 (1164043): Guest Log: -rw-r--r--. 1 root root 220919758 Oct 10 21:18 ATLAS.root_0
2025-10-11 13:17:39 (1164043): Guest Log: -rw-r--r--. 1 root root      9775 Oct 10 21:18 init_data.xml
2025-10-11 13:17:39 (1164043): Guest Log: -rw-r--r--. 1 root root    569681 Oct 10 21:18 input.tar.gz
2025-10-11 13:17:39 (1164043): Guest Log: -rw-r--r--. 1 root root   7690240 Oct 11 11:17 result.tar.gz
2025-10-11 13:17:39 (1164043): Guest Log: -rw-r--r--. 1 root root     15120 Oct 10 21:18 start_atlas.sh
2025-10-11 13:17:39 (1164043): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 13:17:39 (1164043): VM Completion File Detected.
2025-10-11 13:17:39 (1164043): Powering off VM.
2025-10-11 13:17:40 (1164043): Successfully stopped VM.
2025-10-11 13:17:40 (1164043): Deregistering VM. (boinc_c88bd2071053373a, slot#45)
2025-10-11 13:17:40 (1164043): Removing network bandwidth throttle group from VM.
2025-10-11 13:17:40 (1164043): Removing VM from VirtualBox.
2025-10-11 13:17:45 (1164043): called boinc_finish(0)

</stderr_txt>
]]>

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