Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:28:29 (1062406): wrapper (7.7.26015): starting
18:28:29 (1062406): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 18:28:29] Arguments: --nthreads 8
[2025-10-10 18:28:29] Threads: 8
[2025-10-10 18:28:29] Checking for CVMFS
[2025-10-10 18:28:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 18:28:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 18:28:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 18:28:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 18:28:51] 2.13.2.0 130249 115298 128756 151564 3 144 40285636 40960000 9690 16776704 1 77250474 99.732 51526233 31384 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 18:28:51] CVMFS is ok
[2025-10-10 18:28:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 18:28:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 18:28:51] Further information can be found at the LHC@home message board.
[2025-10-10 18:28:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 18:28:51] Checking for apptainer binary...
[2025-10-10 18:28:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 18:28:51] Running /usr/bin/apptainer --version
[2025-10-10 18:28:51] apptainer version 1.4.3-1.el9
[2025-10-10 18:28:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 18:28:52] c-211-6.aglt2.org
[2025-10-10 18:28:52] apptainer works
[2025-10-10 18:28:52] Set ATHENA_PROC_NUMBER=8
[2025-10-10 18:28:52] Set ATHENA_CORE_NUMBER=8
[2025-10-10 18:28:52] Starting ATLAS job with PandaID=6837668475
[2025-10-10 18:28:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 05:03:06]  *** The last 200 lines of the pilot log: ***
[2025-10-11 05:03:06] 2025-10-11 09:01:59,262 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:03:06] 2025-10-11 09:01:59,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:03:06] 2025-10-11 09:01:59,278 | INFO     | fitting pss+swap vs Time
[2025-10-11 05:03:06] 2025-10-11 09:01:59,279 | INFO     | sum of square deviations: 73550067223.47658
[2025-10-11 05:03:06] 2025-10-11 09:01:59,372 | INFO     | sum of deviations: -156729026368.42175
[2025-10-11 05:03:06] 2025-10-11 09:01:59,372 | INFO     | mean x: 1760154353.9709208
[2025-10-11 05:03:06] 2025-10-11 09:01:59,372 | INFO     | mean y: 2504082.4765751213
[2025-10-11 05:03:06] 2025-10-11 09:01:59,372 | INFO     | -- intersect: 3753245428.7461567
[2025-10-11 05:03:06] 2025-10-11 09:01:59,372 | INFO     | intersect: 3753245428.7461567
[2025-10-11 05:03:06] 2025-10-11 09:01:59,373 | INFO     | chi2: 5.598373591602638
[2025-10-11 05:03:06] 2025-10-11 09:01:59,374 | INFO     | sum of square deviations: 71782357485.1336
[2025-10-11 05:03:06] 2025-10-11 09:01:59,518 | INFO     | sum of deviations: 570594864.4853243
[2025-10-11 05:03:06] 2025-10-11 09:01:59,518 | INFO     | mean x: 1760154201.47557
[2025-10-11 05:03:06] 2025-10-11 09:01:59,518 | INFO     | mean y: 2517630.8990228013
[2025-10-11 05:03:06] 2025-10-11 09:01:59,518 | INFO     | -- intersect: -11473758.9528949
[2025-10-11 05:03:06] 2025-10-11 09:01:59,518 | INFO     | intersect: -11473758.9528949
[2025-10-11 05:03:06] 2025-10-11 09:01:59,553 | INFO     | chi2: 2.759332927020907
[2025-10-11 05:03:06] 2025-10-11 09:01:59,553 | INFO     | current chi2=2.759332927020907 (change=50.71188298044616 %)
[2025-10-11 05:03:06] 2025-10-11 09:01:59,554 | INFO     | sum of square deviations: 70042980261.4682
[2025-10-11 05:03:06] 2025-10-11 09:01:59,674 | INFO     | sum of deviations: 513466139.01967937
[2025-10-11 05:03:06] 2025-10-11 09:01:59,675 | INFO     | mean x: 1760154048.9704432
[2025-10-11 05:03:06] 2025-10-11 09:01:59,675 | INFO     | mean y: 2517625.8899835795
[2025-10-11 05:03:06] 2025-10-11 09:01:59,675 | INFO     | -- intersect: -10385587.25473027
[2025-10-11 05:03:06] 2025-10-11 09:01:59,675 | INFO     | intersect: -10385587.25473027
[2025-10-11 05:03:06] 2025-10-11 09:01:59,676 | INFO     | chi2: 2.7593165767313397
[2025-10-11 05:03:06] 2025-10-11 09:01:59,676 | INFO     | current chi2=2.7593165767313397 (change=0.0005925450099564033 %)
[2025-10-11 05:03:06] 2025-10-11 09:01:59,676 | INFO     | right removable region: 608
[2025-10-11 05:03:06] 2025-10-11 09:01:59,677 | INFO     | sum of square deviations: 71781875911.39568
[2025-10-11 05:03:06] 2025-10-11 09:01:59,855 | INFO     | sum of deviations: -295428475706.7627
[2025-10-11 05:03:06] 2025-10-11 09:01:59,856 | INFO     | mean x: 1760154506.4869707
[2025-10-11 05:03:06] 2025-10-11 09:01:59,856 | INFO     | mean y: 2516019.654723127
[2025-10-11 05:03:06] 2025-10-11 09:01:59,856 | INFO     | -- intersect: 7246681155.457237
[2025-10-11 05:03:06] 2025-10-11 09:01:59,856 | INFO     | intersect: 7246681155.457237
[2025-10-11 05:03:06] 2025-10-11 09:01:59,857 | INFO     | chi2: 3.4266694859689446
[2025-10-11 05:03:06] 2025-10-11 09:01:59,857 | INFO     | current chi2=3.4266694859689446 (change=38.79169673297924 %)
[2025-10-11 05:03:06] 2025-10-11 09:01:59,858 | INFO     | sum of square deviations: 70042318066.0
[2025-10-11 05:03:06] 2025-10-11 09:01:59,870 | INFO     | sum of deviations: -304421690803.0
[2025-10-11 05:03:06] 2025-10-11 09:01:59,871 | INFO     | mean x: 1760154659.0
[2025-10-11 05:03:06] 2025-10-11 09:01:59,871 | INFO     | mean y: 2516803.21182266
[2025-10-11 05:03:06] 2025-10-11 09:01:59,871 | INFO     | -- intersect: 7652595672.141499
[2025-10-11 05:03:06] 2025-10-11 09:01:59,871 | INFO     | intersect: 7652595672.141499
[2025-10-11 05:03:06] 2025-10-11 09:01:59,872 | INFO     | chi2: 3.3951934244073927
[2025-10-11 05:03:06] 2025-10-11 09:01:59,872 | INFO     | current chi2=3.3951934244073927 (change=0.9185613520777468 %)
[2025-10-11 05:03:06] 2025-10-11 09:01:59,873 | INFO     | left removable region: 20
[2025-10-11 05:03:06] 2025-10-11 09:01:59,873 | INFO     | sum of square deviations: 63043494210.79426
[2025-10-11 05:03:06] 2025-10-11 09:01:59,885 | INFO     | sum of deviations: -112643590160.70065
[2025-10-11 05:03:06] 2025-10-11 09:01:59,885 | INFO     | mean x: 1760154628.5187075
[2025-10-11 05:03:06] 2025-10-11 09:01:59,885 | INFO     | mean y: 2527573.9727891157
[2025-10-11 05:03:06] 2025-10-11 09:01:59,885 | INFO     | -- intersect: 3147501358.7598314
[2025-10-11 05:03:06] 2025-10-11 09:01:59,885 | INFO     | intersect: 3147501358.7598314
[2025-10-11 05:03:06] 2025-10-11 09:01:59,886 | INFO     | chi2: 0.45427004878568683
[2025-10-11 05:03:06] 2025-10-11 09:01:59,887 | INFO     | -- intersect: 3147501358.7598314
[2025-10-11 05:03:06] 2025-10-11 09:01:59,887 | INFO     | current memory leak: -1.79 B/s (using 588 data points, chi2=0.45)
[2025-10-11 05:03:06] 2025-10-11 09:01:59,888 | INFO     | could have reported an average CPU frequency of 2437 MHz (24 samples)
[2025-10-11 05:03:06] 2025-10-11 09:01:59,888 | INFO     | ..............................
[2025-10-11 05:03:06] 2025-10-11 09:01:59,888 | INFO     | . Timing measurements:
[2025-10-11 05:03:06] 2025-10-11 09:01:59,888 | INFO     | . get job = 0 s
[2025-10-11 05:03:06] 2025-10-11 09:01:59,888 | INFO     | . initial setup = 3 s
[2025-10-11 05:03:06] 2025-10-11 09:01:59,889 | INFO     | . payload setup = 30 s
[2025-10-11 05:03:06] 2025-10-11 09:01:59,889 | INFO     | . stage-in = 0 s
[2025-10-11 05:03:06] 2025-10-11 09:01:59,889 | INFO     | . payload execution = 37760 s
[2025-10-11 05:03:06] 2025-10-11 09:01:59,889 | INFO     | . stage-out = 13 s
[2025-10-11 05:03:06] 2025-10-11 09:01:59,889 | INFO     | . log creation = 3 s
[2025-10-11 05:03:06] 2025-10-11 09:01:59,889 | INFO     | ..............................
[2025-10-11 05:03:06] 2025-10-11 09:02:00,034 | INFO     | time since job start (37940s) is within the limit (172800.0s)
[2025-10-11 05:03:06] 2025-10-11 09:02:01,120 | INFO     | 
[2025-10-11 05:03:06] 2025-10-11 09:02:01,121 | INFO     | job summary report
[2025-10-11 05:03:06] 2025-10-11 09:02:01,121 | INFO     | --------------------------------------------------
[2025-10-11 05:03:06] 2025-10-11 09:02:01,121 | INFO     | PanDA job id: 6837668475
[2025-10-11 05:03:06] 2025-10-11 09:02:01,121 | INFO     | task id: 46676269
[2025-10-11 05:03:06] 2025-10-11 09:02:01,121 | INFO     | errors: (none)
[2025-10-11 05:03:06] 2025-10-11 09:02:01,121 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 05:03:06] 2025-10-11 09:02:01,122 | INFO     | pilot state: finished 
[2025-10-11 05:03:06] 2025-10-11 09:02:01,122 | INFO     | transexitcode: 0
[2025-10-11 05:03:06] 2025-10-11 09:02:01,122 | INFO     | exeerrorcode: 0
[2025-10-11 05:03:06] 2025-10-11 09:02:01,122 | INFO     | exeerrordiag: 
[2025-10-11 05:03:06] 2025-10-11 09:02:01,122 | INFO     | exitcode: 0
[2025-10-11 05:03:06] 2025-10-11 09:02:01,122 | INFO     | exitmsg: OK
[2025-10-11 05:03:06] 2025-10-11 09:02:01,122 | INFO     | cpuconsumptiontime: 59625 s
[2025-10-11 05:03:06] 2025-10-11 09:02:01,122 | INFO     | nevents: 400
[2025-10-11 05:03:06] 2025-10-11 09:02:01,123 | INFO     | neventsw: 0
[2025-10-11 05:03:06] 2025-10-11 09:02:01,123 | INFO     | pid: 1077929
[2025-10-11 05:03:06] 2025-10-11 09:02:01,123 | INFO     | pgrp: 1077929
[2025-10-11 05:03:06] 2025-10-11 09:02:01,123 | INFO     | corecount: 8
[2025-10-11 05:03:06] 2025-10-11 09:02:01,123 | INFO     | event service: False
[2025-10-11 05:03:06] 2025-10-11 09:02:01,123 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 30: 2349259, 35: 2349415, 37795: 2390247, 37797: 2390246, 37813: 2399300, 37815: 2399356, 378
[2025-10-11 05:03:06] 2025-10-11 09:02:01,123 | INFO     | --------------------------------------------------
[2025-10-11 05:03:06] 2025-10-11 09:02:01,123 | INFO     | 
[2025-10-11 05:03:06] 2025-10-11 09:02:01,124 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 05:03:06] 2025-10-11 09:02:01,293 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,294 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,294 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,294 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 05:03:06] 2025-10-11 09:02:01,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,300 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 05:03:06] 2025-10-11 09:02:01,301 | INFO     | job 6837668475 has completed (purged errors)
[2025-10-11 05:03:06] 2025-10-11 09:02:01,301 | INFO     | overall cleanup function is called
[2025-10-11 05:03:06] 2025-10-11 09:02:02,311 | INFO     | --- collectZombieJob: --- 10, [1077929]
[2025-10-11 05:03:06] 2025-10-11 09:02:02,311 | INFO     | zombie collector waiting for pid 1077929
[2025-10-11 05:03:06] 2025-10-11 09:02:02,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 05:03:06] 2025-10-11 09:02:02,312 | INFO     | collected zombie processes
[2025-10-11 05:03:06] 2025-10-11 09:02:02,312 | INFO     | will attempt to kill all subprocesses of pid=1077929
[2025-10-11 05:03:06] 2025-10-11 09:02:05,616 | INFO     | process IDs to be killed: [1077929] (in reverse order)
[2025-10-11 05:03:06] 2025-10-11 09:02:05,998 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 05:03:06] 2025-10-11 09:02:05,999 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 05:03:06] 2025-10-11 09:02:06,086 | INFO     | did not find any defunct processes belonging to 1077929
[2025-10-11 05:03:06] 2025-10-11 09:02:06,149 | INFO     | did not find any defunct processes belonging to 1077929
[2025-10-11 05:03:06] 2025-10-11 09:02:06,150 | INFO     | ready for new job
[2025-10-11 05:03:06] 2025-10-11 09:02:06,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 05:03:06] 2025-10-11 09:02:06,180 | INFO     | ***************************************
[2025-10-11 05:03:06] 2025-10-11 09:02:06,181 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 05:03:06] 2025-10-11 09:02:06,181 | INFO     | ***************************************
[2025-10-11 05:03:06] 2025-10-11 09:02:06,181 | INFO     | 
[2025-10-11 05:03:06] 2025-10-11 09:02:06,212 | INFO     | architecture information:
[2025-10-11 05:03:06] 2025-10-11 09:02:06,237 | INFO     | executing command: cat /etc/os-release
[2025-10-11 05:03:06] 2025-10-11 09:02:06,352 | INFO     | cat /etc/os-release:
[2025-10-11 05:03:06] NAME="CentOS Linux"
[2025-10-11 05:03:06] VERSION="7 (Core)"
[2025-10-11 05:03:06] ID="centos"
[2025-10-11 05:03:06] ID_LIKE="rhel fedora"
[2025-10-11 05:03:06] VERSION_ID="7"
[2025-10-11 05:03:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 05:03:06] ANSI_COLOR="0;31"
[2025-10-11 05:03:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 05:03:06] HOME_URL="https://www.centos.org/"
[2025-10-11 05:03:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 05:03:06] 
[2025-10-11 05:03:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 05:03:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 05:03:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 05:03:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 05:03:06] 
[2025-10-11 05:03:06] 2025-10-11 09:02:06,353 | INFO     | ***************************************
[2025-10-11 05:03:06] 2025-10-11 09:02:06,881 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 05:03:06] 2025-10-11 09:02:07,112 | INFO     | sufficient remaining disk space (63248007168 B)
[2025-10-11 05:03:06] 2025-10-11 09:02:07,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 05:03:06] 2025-10-11 09:02:07,112 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 05:03:06] 2025-10-11 09:02:07,112 | INFO     | update_server=False
[2025-10-11 05:03:06] 2025-10-11 09:02:07,113 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 05:03:06] 2025-10-11 09:02:07,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:03:06] 2025-10-11 09:02:07,113 | INFO     | aborting loop
[2025-10-11 05:03:06] 2025-10-11 09:02:07,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 05:03:06] 2025-10-11 09:02:07,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:03:06] 2025-10-11 09:02:07,246 | INFO     | all data control threads have been joined
[2025-10-11 05:03:06] 2025-10-11 09:02:07,387 | INFO     | all payload control threads have been joined
[2025-10-11 05:03:06] 2025-10-11 09:02:08,118 | INFO     | [job] retrieve thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:08,119 | INFO     | [job] job monitor thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:08,141 | INFO     | [job] queue monitor thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:08,253 | INFO     | [data] control thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:08,274 | INFO     | [payload] failed_post thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:08,395 | INFO     | [payload] control thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:08,616 | INFO     | all job control threads have been joined
[2025-10-11 05:03:06] 2025-10-11 09:02:08,689 | INFO     | [payload] validate_post thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:09,129 | INFO     | [data] copytool_out thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:09,234 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:09,256 | INFO     | [job] validate thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:09,257 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:09,258 | INFO     | [data] copytool_in thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:09,258 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:09,259 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:09,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 05:03:06] 2025-10-11 09:02:09,673 | INFO     | [job] control thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:13,530 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 05:03:06] 2025-10-11 09:02:37,563 | INFO     | PID=1067332 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 05:03:06] 2025-10-11 09:02:37,563 | INFO     | .. there are 9 such processes running
[2025-10-11 05:03:06] 2025-10-11 09:02:37,601 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 05:03:06] 2025-10-11 09:02:37,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 05:03:06] 2025-10-11 09:02:37,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 05:03:06] 2025-10-11 09:02:53,931 | INFO     | [monitor] cgroup control has ended
[2025-10-11 05:03:06] 2025-10-11 09:02:56,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196356462400)>', '<ExcThread(monitor, started 140195601028864)>']
[2025-10-11 05:03:06] 2025-10-11 09:02:56,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 05:03:06] 2025-10-11 09:02:56,835 | INFO     | [monitor] control thread has ended
[2025-10-11 05:03:06] 2025-10-11 09:03:01,028 | INFO     | all workflow threads have been joined
[2025-10-11 05:03:06] 2025-10-11 09:03:01,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 05:03:06] 2025-10-11 09:03:01,035 | INFO     | traces error code: 0
[2025-10-11 05:03:06] 2025-10-11 09:03:01,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 05:03:06] 2025-10-11 09:03:03,627 [wrapper] ==== pilot stdout END ====
[2025-10-11 05:03:06] 2025-10-11 09:03:03,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 05:03:06] 2025-10-11 09:03:03,803 [wrapper] pilotpid: 1067332
[2025-10-11 05:03:06] 2025-10-11 09:03:03,904 [wrapper] Pilot exit status: 0
[2025-10-11 05:03:06] 2025-10-11 09:03:04,335 [wrapper] pandaids: 6837668475
[2025-10-11 05:03:06] 2025-10-11 09:03:04,678 [wrapper] cleanup supervisor_pilot 1893264 1067333
[2025-10-11 05:03:06] 2025-10-11 09:03:04,712 [wrapper] Test setup, not cleaning
[2025-10-11 05:03:06] 2025-10-11 09:03:04,774 [wrapper] apfmon messages muted
[2025-10-11 05:03:06] 2025-10-11 09:03:04,830 [wrapper] ==== wrapper stdout END ====
[2025-10-11 05:03:06] 2025-10-11 09:03:04,886 [wrapper] ==== wrapper stderr END ====
[2025-10-11 05:03:06]  *** Error codes and diagnostics ***
[2025-10-11 05:03:06]     "exeErrorCode": 0,
[2025-10-11 05:03:06]     "exeErrorDiag": "",
[2025-10-11 05:03:06]     "pilotErrorCode": 0,
[2025-10-11 05:03:06]     "pilotErrorDiag": "",
[2025-10-11 05:03:06]  *** Listing of results directory ***
[2025-10-11 05:03:06] total 418520
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 11:50 pilot3.tar.gz
[2025-10-11 05:03:06] -rwx------. 1 boincer umatlas     36292 Oct 10 12:04 runpilot2-wrapper.sh
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 12:04 queuedata.json
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas       100 Oct 10 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 05:03:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 18:28 run_atlas
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas       105 Oct 10 18:28 job.xml
[2025-10-11 05:03:06] -rw-r--r--. 2 boincer umatlas 222387468 Oct 10 18:28 EVNT.46676267._001675.pool.root.1
[2025-10-11 05:03:06] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 18:28 input.tar.gz
[2025-10-11 05:03:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:28 start_atlas.sh
[2025-10-11 05:03:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 18:28 shared
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas         0 Oct 10 18:28 boinc_lockfile
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 18:28 pandaJob.out
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas    975517 Oct 10 18:29 agis_schedconf.cvmfs.json
[2025-10-11 05:03:06] drwx------. 5 boincer umatlas      4096 Oct 10 18:29 pilot3
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas 191784580 Oct 11 04:55 HITS.46676269._041318.pool.root.1
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas       531 Oct 11 04:56 boinc_task_state.xml
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas      1051 Oct 11 05:00 memory_monitor_summary.json
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas   1560580 Oct 11 05:00 agis_ddmendpoints.agis.ALL.json
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas    733622 Oct 11 05:00 log.46676269._041318.job.log.tgz.1
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas      6613 Oct 11 05:01 init_data.xml
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas      7841 Oct 11 05:01 heartbeat.json
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas        95 Oct 11 05:02 pilot_heartbeat.json
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas      4823 Oct 11 05:03 pilotlog.txt
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 05:03 boinc_mmap_file
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas        28 Oct 11 05:03 wrapper_checkpoint.txt
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas   4520754 Oct 11 05:03 log.46676269._041318.job.log.1
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas       357 Oct 11 05:03 output.list
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas       620 Oct 11 05:03 runtime_log
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas   5273600 Oct 11 05:03 result.tar.gz
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 05:03 runtime_log.err
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas       662 Oct 11 05:03 IrGLDmxmUR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgndNDmDPNFHo.diag
[2025-10-11 05:03:06] -rw-r--r--. 1 boincer umatlas      2142 Oct 11 05:03 stderr.txt
[2025-10-11 05:03:06] HITS file was successfully produced:
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas 191784580 Oct 11 04:55 shared/HITS.pool.root.1
[2025-10-11 05:03:06]  *** Contents of shared directory: ***
[2025-10-11 05:03:06] total 410200
[2025-10-11 05:03:06] -rw-r--r--. 2 boincer umatlas 222387468 Oct 10 18:28 ATLAS.root_0
[2025-10-11 05:03:06] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 18:28 input.tar.gz
[2025-10-11 05:03:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:28 start_atlas.sh
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas 191784580 Oct 11 04:55 HITS.pool.root.1
[2025-10-11 05:03:06] -rw-------. 1 boincer umatlas   5273600 Oct 11 05:03 result.tar.gz
05:03:08 (1062406): run_atlas exited; CPU time 60789.720777
05:03:08 (1062406): called boinc_finish(0)

</stderr_txt>
]]>

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