Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-14 16:59:41 (14312): vboxwrapper version 26210
2025-10-14 16:59:41 (14312): BOINC client version: 8.2.4
2025-10-14 16:59:42 (14312): Detected: VirtualBox VboxManage Interface (Version: 6.1.2)
2025-10-14 16:59:42 (14312): Successfully copied 'init_data.xml' to the shared directory.
2025-10-14 16:59:42 (14312): Create VM. (boinc_c95adf33b8cedcf7, slot#0)
2025-10-14 16:59:43 (14312): Setting Memory Size for VM. (4400MB)
2025-10-14 16:59:43 (14312): Setting CPU Count for VM. (4)
2025-10-14 16:59:43 (14312): Setting Chipset Options for VM.
2025-10-14 16:59:44 (14312): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-14 16:59:44 (14312): Setting Boot Options for VM.
2025-10-14 16:59:44 (14312): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-14 16:59:45 (14312): Enabling VM Network Access.
2025-10-14 16:59:45 (14312): Disabling USB Support for VM.
2025-10-14 16:59:45 (14312): Disabling COM Port Support for VM.
2025-10-14 16:59:46 (14312): Disabling LPT Port Support for VM.
2025-10-14 16:59:46 (14312): Disabling Audio Support for VM.
2025-10-14 16:59:46 (14312): Disabling Clipboard Support for VM.
2025-10-14 16:59:47 (14312): Disabling Drag and Drop Support for VM.
2025-10-14 16:59:48 (14312): Adding storage controller(s) to VM.
2025-10-14 16:59:48 (14312): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-14 16:59:49 (14312): Adding VirtualBox Guest Additions to VM.
2025-10-14 16:59:49 (14312): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-14 16:59:49 (14312): forwarding host port 56766 to guest port 80
2025-10-14 16:59:50 (14312): Enabling remote desktop for VM.
2025-10-14 16:59:50 (14312): Required extension pack not installed, remote desktop not enabled.
2025-10-14 16:59:50 (14312): Enabling shared directory for VM.
2025-10-14 16:59:50 (14312): Starting VM using VBoxManage interface. (boinc_c95adf33b8cedcf7, slot#0)
2025-10-14 16:59:55 (14312): Successfully started VM. (PID = '11600')
2025-10-14 16:59:55 (14312): Reporting VM Process ID to BOINC.
2025-10-14 16:59:55 (14312): Guest Log: BIOS: VirtualBox 6.1.2
2025-10-14 16:59:55 (14312): Guest Log: CPUID EDX: 0x178bfbff
2025-10-14 16:59:55 (14312): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-14 16:59:55 (14312): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-14 16:59:55 (14312): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-14 16:59:55 (14312): Detected: Web Application Enabled (http://localhost:56766)
2025-10-14 16:59:55 (14312): Preference change detected
2025-10-14 16:59:55 (14312): Setting CPU throttle for VM. (90%)
2025-10-14 16:59:55 (14312): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-14 16:59:57 (14312): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-14 16:59:57 (14312): Guest Log: BIOS: Booting from Hard Disk...
2025-10-14 17:00:00 (14312): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-14 17:00:00 (14312): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-14 17:00:00 (14312): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-14 17:00:08 (14312): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-14 17:00:08 (14312): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-14 17:00:20 (14312): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-14 17:00:20 (14312): Guest Log: 00:00:00.000108 main     Log opened 2025-10-14T17:00:18.882915000Z
2025-10-14 17:00:20 (14312): Guest Log: 00:00:00.000175 main     OS Product: Linux
2025-10-14 17:00:20 (14312): Guest Log: 00:00:00.000201 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-14 17:00:20 (14312): Guest Log: 00:00:00.000223 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-14 17:00:20 (14312): Guest Log: 00:00:00.000245 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-14 17:00:20 (14312): Guest Log: 00:00:00.000246 main     Process ID: 1299
2025-10-14 17:00:20 (14312): Guest Log: 00:00:00.000247 main     Package type: LINUX_64BITS_GENERIC
2025-10-14 17:00:20 (14312): Guest Log: 00:00:00.002261 main     5.2.32 r132073 started. Verbose level = 0
2025-10-14 17:00:21 (14312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-14 17:00:21 (14312): Guest Log: [INFO] Mounting shared directory
2025-10-14 17:00:21 (14312): Guest Log: [INFO] Checking for init_data.xml
2025-10-14 17:00:30 (14312): Guest Log: 00:00:10.023413 timesync vgsvcTimeSyncWorker: Radical guest time change: -37 788 752 486 000ns (GuestNow=1 760 423 430 135 857 000 ns GuestLast=1 760 461 218 888 343 000 ns fSetTimeLastLoop=true )
2025-10-14 17:00:32 (14312): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-14 17:00:32 (14312): Guest Log: [INFO] Detected branch: prod
2025-10-14 17:00:32 (14312): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-14 17:00:32 (14312): Guest Log: Copying input files
2025-10-14 17:00:36 (14312): Guest Log: Copied input files into RunAtlas.
2025-10-14 17:00:36 (14312): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-14 17:00:36 (14312): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-14 17:00:36 (14312): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-14 17:00:36 (14312): Guest Log: Further information can be found at the LHC@home message board.
2025-10-14 17:00:50 (14312): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-14 17:00:50 (14312): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-14 17:00:50 (14312): Guest Log: 2.6.3.0 1578 0 30116 151688 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-14 17:00:53 (14312): Guest Log: copied the webapp to /var/www
2025-10-14 17:00:53 (14312): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-14 17:00:53 (14312): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-14 17:00:55 (14312): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-14 17:00:55 (14312): Guest Log:  *** Starting ATLAS job. (PandaID=6837706973 taskID=46676269) ***
2025-10-14 18:39:58 (14312): Status Report: Elapsed Time: '6000.000000'
2025-10-14 18:39:58 (14312): Status Report: CPU Time: '18157.703125'
2025-10-14 18:40:39 (14312): VM state change detected. (old = 'running', new = 'paused')
2025-10-14 19:31:13 (14312): VM state change detected. (old = 'paused', new = 'running')
2025-10-14 19:31:16 (14312): Guest Log: 01:40:22.661111 timesync vgsvcTimeSyncWorker: Radical host time change: 3 043 520 000 000ns (HostNow=1 760 432 476 287 000 000 ns HostLast=1 760 429 432 767 000 000 ns)
2025-10-14 19:31:26 (14312): Guest Log: 01:40:32.662183 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 043 514 863 000ns (GuestNow=1 760 432 486 288 133 000 ns GuestLast=1 760 429 442 773 270 000 ns fSetTimeLastLoop=true )
2025-10-14 21:04:48 (14312): VM state change detected. (old = 'running', new = 'paused')
2025-10-14 21:13:59 (14312): VM state change detected. (old = 'paused', new = 'running')
2025-10-14 21:15:25 (14312): Guest Log:  *** Job finished ***
2025-10-14 21:15:25 (14312): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:35:45,015 | INFO     | [payload] execute_payloads thread has finished
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:35:46,721 | INFO     | [data] queue_monitor thread has finished
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:02,346 | INFO     | [monitor] cgroup control has ended
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:03,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980258428736)>', '<ExcThread(monitor, started 139979149797120)>']
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:03,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:03,386 | INFO     | [monitor] control thread has ended
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:08,384 | INFO     | all workflow threads have been joined
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:08,384 | INFO     | end of generic workflow (traces error code: 0)
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:08,384 | INFO     | traces error code: 0
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:08,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:08,491 [wrapper] ==== pilot stdout END ====
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:08,496 [wrapper] ==== wrapper stdout RESUME ====
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:08,499 [wrapper] pilotpid: 5993
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:08,503 [wrapper] Pilot exit status: 0
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:09,345 [wrapper] pandaids: 6837706973
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:09,375 [wrapper] cleanup supervisor_pilot  8528 5994
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:09,379 [wrapper] Test setup, not cleaning
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:09,383 [wrapper] apfmon messages muted
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:09,387 [wrapper] ==== wrapper stdout END ====
2025-10-14 21:15:25 (14312): Guest Log: 2025-10-14 10:36:09,391 [wrapper] ==== wrapper stderr END ====
2025-10-14 21:15:25 (14312): Guest Log:  *** Error codes and diagnostics ***
2025-10-14 21:15:25 (14312): Guest Log:     "exeErrorCode": 0,
2025-10-14 21:15:25 (14312): Guest Log:     "exeErrorDiag": "",
2025-10-14 21:15:25 (14312): Guest Log:     "pilotErrorCode": 0,
2025-10-14 21:15:25 (14312): Guest Log:     "pilotErrorDiag": "",
2025-10-14 21:15:25 (14312): Guest Log:  *** Listing of results directory ***
2025-10-14 21:15:25 (14312): Guest Log: total 188572
2025-10-14 21:15:25 (14312): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 10 18:18 pilot3.tar.gz
2025-10-14 21:15:25 (14312): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 10 18:26 runpilot2-wrapper.sh
2025-10-14 21:15:25 (14312): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 10 18:26 queuedata.json
2025-10-14 21:15:25 (14312): Guest Log: -rwxr-xr-x. 1 atlas atlas      5898 Oct 14 06:30 init_data.xml
2025-10-14 21:15:25 (14312): Guest Log: -rwxr-xr-x. 1 atlas atlas    569671 Oct 14 06:30 input.tar.gz
2025-10-14 21:15:25 (14312): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 14 06:30 start_atlas.sh
2025-10-14 21:15:25 (14312): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 14 06:30 EVNT.46676267._001751.pool.root.1 -> /data/./ATLAS.root_0
2025-10-14 21:15:25 (14312): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Oct 14 06:30 pandaJob.out
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas    972807 Oct 14 06:33 agis_schedconf.cvmfs.json
2025-10-14 21:15:25 (14312): Guest Log: drwx------. 5 atlas atlas      4096 Oct 14 06:34 pilot3
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas 185521519 Oct 14 10:34 HITS.46676269._043238.pool.root.1
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas      1033 Oct 14 10:35 memory_monitor_summary.json
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 14 10:35 agis_ddmendpoints.agis.ALL.json
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas    342347 Oct 14 10:35 log.46676269._043238.job.log.tgz.1
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas        97 Oct 14 10:35 pilot_heartbeat.json
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas      7826 Oct 14 10:35 heartbeat.json
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas      4612 Oct 14 10:36 pilotlog.txt
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas   1528160 Oct 14 10:36 log.46676269._043238.job.log.1
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas       357 Oct 14 10:36 output.list
2025-10-14 21:15:25 (14312): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 14 10:36 runtime_log
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas   1894400 Oct 14 10:36 result.tar.gz
2025-10-14 21:15:25 (14312): Guest Log: -rw-r--r--. 1 atlas atlas      8670 Oct 14 10:36 runtime_log.err
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas       668 Oct 14 10:36 oFRLDmozWR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcPQMDmTIvVmn.diag
2025-10-14 21:15:25 (14312): Guest Log: Looking for outputfile HITS.46676269._043238.pool.root.1
2025-10-14 21:15:25 (14312): Guest Log: HITS file was successfully produced
2025-10-14 21:15:25 (14312): Guest Log: -rw-------. 1 atlas atlas 185521519 Oct 14 10:34 /home/atlas/RunAtlas/HITS.46676269._043238.pool.root.1
2025-10-14 21:15:26 (14312): Guest Log: Successfully finished the ATLAS job!
2025-10-14 21:15:26 (14312): Guest Log: Copying the results back to the shared directory!
2025-10-14 21:15:26 (14312): Guest Log:  *** Contents of shared directory: ***
2025-10-14 21:15:26 (14312): Guest Log: total 399796
2025-10-14 21:15:26 (14312): Guest Log: -rwxrwxrwx. 1 root root 221369541 Oct 14 06:29 ATLAS.root_0
2025-10-14 21:15:26 (14312): Guest Log: -rwxrwxrwx. 1 root root 185521519 Oct 14  2025 HITS.pool.root.1
2025-10-14 21:15:26 (14312): Guest Log: -rwxrwxrwx. 1 root root      5898 Oct 14 06:29 init_data.xml
2025-10-14 21:15:26 (14312): Guest Log: -rwxrwxrwx. 1 root root    569671 Oct 10 20:48 input.tar.gz
2025-10-14 21:15:26 (14312): Guest Log: -rwxrwxrwx. 1 root root   1894400 Oct 14  2025 result.tar.gz
2025-10-14 21:15:26 (14312): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 10 20:48 start_atlas.sh
2025-10-14 21:15:26 (14312): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-14 21:15:26 (14312): VM Completion File Detected.
2025-10-14 21:15:26 (14312): Powering off VM.
2025-10-14 21:15:26 (14312): Successfully stopped VM.
2025-10-14 21:15:26 (14312): Deregistering VM. (boinc_c95adf33b8cedcf7, slot#0)
2025-10-14 21:15:27 (14312): Removing network bandwidth throttle group from VM.
2025-10-14 21:15:27 (14312): Removing VM from VirtualBox.
2025-10-14 21:15:32 (14312): called boinc_finish(0)

</stderr_txt>
]]>

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