Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:42:23 (2939689): wrapper (7.7.26015): starting
16:42:23 (2939689): wrapper: running run_atlas (--nthreads 11)
[2025-10-10 16:42:23] Arguments: --nthreads 11
[2025-10-10 16:42:23] Threads: 11
[2025-10-10 16:42:23] Checking for CVMFS
[2025-10-10 16:42:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 16:42:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 16:42:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 16:42:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 16:42:25] 2.13.2.0 2754702 126859 345212 151560 0 608 31649268 32935937 60723 16776704 0 804617751 99.686 672081318 33516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 16:42:25] CVMFS is ok
[2025-10-10 16:42:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 16:42:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 16:42:25] Further information can be found at the LHC@home message board.
[2025-10-10 16:42:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 16:42:25] Checking for apptainer binary...
[2025-10-10 16:42:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 16:42:25] Running /usr/bin/apptainer --version
[2025-10-10 16:42:25] apptainer version 1.4.3-1.el9
[2025-10-10 16:42:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 16:42:25] c7-9-14.aglt2.org
[2025-10-10 16:42:25] apptainer works
[2025-10-10 16:42:25] Set ATHENA_PROC_NUMBER=11
[2025-10-10 16:42:25] Set ATHENA_CORE_NUMBER=11
[2025-10-10 16:42:25] Starting ATLAS job with PandaID=6837630495
[2025-10-10 16:42:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 18:18:40]  *** The last 200 lines of the pilot log: ***
[2025-10-10 18:18:40] 2025-10-10 22:17:37,056 | INFO     | time since job start (5663s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:39,141 | INFO     | monitor loop #356: job 0:6837630495 is in state 'finished'
[2025-10-10 18:18:40] 2025-10-10 22:17:39,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:18:40] 2025-10-10 22:17:40,091 | INFO     | PID=2945891 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 18:18:40] 2025-10-10 22:17:40,091 | INFO     | .. there are 93 such processes running
[2025-10-10 18:18:40] 2025-10-10 22:17:41,092 | INFO     | time since job start (5667s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:41,645 | INFO     | monitor loop #357: job 0:6837630495 is in state 'finished'
[2025-10-10 18:18:40] 2025-10-10 22:17:41,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:18:40] 2025-10-10 22:17:43,106 | INFO     | time since job start (5669s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:44,175 | INFO     | monitor loop #358: job 0:6837630495 is in state 'finished'
[2025-10-10 18:18:40] 2025-10-10 22:17:44,176 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:18:40] 2025-10-10 22:17:45,115 | INFO     | time since job start (5671s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:46,680 | INFO     | monitor loop #359: job 0:6837630495 is in state 'finished'
[2025-10-10 18:18:40] 2025-10-10 22:17:46,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:18:40] 2025-10-10 22:17:47,126 | INFO     | time since job start (5673s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:49,133 | INFO     | time since job start (5675s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:49,204 | INFO     | monitor loop #360: job 0:6837630495 is in state 'finished'
[2025-10-10 18:18:40] 2025-10-10 22:17:49,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:18:40] 2025-10-10 22:17:51,163 | INFO     | time since job start (5677s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:51,711 | INFO     | monitor loop #361: job 0:6837630495 is in state 'finished'
[2025-10-10 18:18:40] 2025-10-10 22:17:51,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:18:40] 2025-10-10 22:17:53,175 | INFO     | time since job start (5679s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:54,216 | INFO     | monitor loop #362: job 0:6837630495 is in state 'finished'
[2025-10-10 18:18:40] 2025-10-10 22:17:54,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:18:40] 2025-10-10 22:17:55,212 | INFO     | time since job start (5681s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:56,727 | INFO     | monitor loop #363: job 0:6837630495 is in state 'finished'
[2025-10-10 18:18:40] 2025-10-10 22:17:56,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:18:40] 2025-10-10 22:17:57,223 | INFO     | time since job start (5683s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:59,240 | INFO     | time since job start (5685s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:17:59,244 | INFO     | monitor loop #364: job 0:6837630495 is in state 'finished'
[2025-10-10 18:18:40] 2025-10-10 22:17:59,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:18:40] 2025-10-10 22:18:01,259 | INFO     | time since job start (5687s) is within the limit (172800.0s)
[2025-10-10 18:18:40] 2025-10-10 22:18:01,771 | INFO     | monitor loop #365: job 0:6837630495 is in state 'finished'
[2025-10-10 18:18:40] 2025-10-10 22:18:01,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 18:18:40] 2025-10-10 22:18:03,143 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-10 18:18:40] 2025-10-10 22:18:03,153 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.976023437509
[2025-10-10 18:18:40] 2025-10-10 22:18:03,175 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837630495/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 18:18:40] 2025-10-10 22:18:03,175 | INFO     | extracted standard info from prmon json
[2025-10-10 18:18:40] 2025-10-10 22:18:03,176 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 18:18:40] 2025-10-10 22:18:03,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 18:18:40] 2025-10-10 22:18:03,176 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 18:18:40] 2025-10-10 22:18:03,176 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 18:18:40] 2025-10-10 22:18:03,177 | INFO     | fitting pss+swap vs Time
[2025-10-10 18:18:40] 2025-10-10 22:18:03,177 | INFO     | sum of square deviations: 183758722.8928575
[2025-10-10 18:18:40] 2025-10-10 22:18:03,177 | INFO     | sum of deviations: -2878617958.035714
[2025-10-10 18:18:40] 2025-10-10 22:18:03,177 | INFO     | mean x: 1760131926.5357144
[2025-10-10 18:18:40] 2025-10-10 22:18:03,177 | INFO     | mean y: 2317520.845238095
[2025-10-10 18:18:40] 2025-10-10 22:18:03,177 | INFO     | -- intersect: 27575143955.82176
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | intersect: 27575143955.82176
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | chi2: 0.11578880143594023
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | -- intersect: 27575143955.82176
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | current memory leak: -15.67 B/s (using 84 data points, chi2=0.12)
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | could have reported an average CPU frequency of 3798 MHz (7 samples)
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | ..............................
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | . Timing measurements:
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | . get job = 0 s
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | . initial setup = 3 s
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | . payload setup = 27 s
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | . stage-in = 0 s
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | . payload execution = 5557 s
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | . stage-out = 3 s
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | . log creation = 0 s
[2025-10-10 18:18:40] 2025-10-10 22:18:03,178 | INFO     | ..............................
[2025-10-10 18:18:40] 2025-10-10 22:18:03,664 | INFO     | 
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | job summary report
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | --------------------------------------------------
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | PanDA job id: 6837630495
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | task id: 46676269
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | errors: (none)
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | pilot state: finished 
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | transexitcode: 0
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | exeerrorcode: 0
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | exeerrordiag: 
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | exitcode: 0
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | exitmsg: OK
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | cpuconsumptiontime: 22557 s
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | nevents: 400
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | neventsw: 0
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | pid: 2962532
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | pgrp: 2962532
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | corecount: 11
[2025-10-10 18:18:40] 2025-10-10 22:18:03,665 | INFO     | event service: False
[2025-10-10 18:18:40] 2025-10-10 22:18:03,666 | INFO     | sizes: {0: 2348029, 1: 2348885, 12: 2348885, 20: 2349175, 23: 2349203, 5590: 2375768, 5591: 2375895, 5596: 2385005, 5644: 2385143}
[2025-10-10 18:18:40] 2025-10-10 22:18:03,666 | INFO     | --------------------------------------------------
[2025-10-10 18:18:40] 2025-10-10 22:18:03,666 | INFO     | 
[2025-10-10 18:18:40] 2025-10-10 22:18:03,666 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,808 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,808 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,808 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 18:18:40] 2025-10-10 22:18:03,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,808 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 18:18:40] 2025-10-10 22:18:03,808 | INFO     | job 6837630495 has completed (purged errors)
[2025-10-10 18:18:40] 2025-10-10 22:18:03,808 | INFO     | overall cleanup function is called
[2025-10-10 18:18:40] 2025-10-10 22:18:04,476 | INFO     | PID=2945891 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 18:18:40] 2025-10-10 22:18:04,477 | INFO     | .. there are 93 such processes running
[2025-10-10 18:18:40] 2025-10-10 22:18:04,826 | INFO     | --- collectZombieJob: --- 10, [2962532]
[2025-10-10 18:18:40] 2025-10-10 22:18:04,827 | INFO     | zombie collector waiting for pid 2962532
[2025-10-10 18:18:40] 2025-10-10 22:18:04,827 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 18:18:40] 2025-10-10 22:18:04,827 | INFO     | collected zombie processes
[2025-10-10 18:18:40] 2025-10-10 22:18:04,827 | INFO     | will attempt to kill all subprocesses of pid=2962532
[2025-10-10 18:18:40] 2025-10-10 22:18:06,516 | INFO     | process IDs to be killed: [2962532] (in reverse order)
[2025-10-10 18:18:40] 2025-10-10 22:18:07,448 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 18:18:40] 2025-10-10 22:18:07,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 18:18:40] 2025-10-10 22:18:07,511 | INFO     | did not find any defunct processes belonging to 2962532
[2025-10-10 18:18:40] 2025-10-10 22:18:07,572 | INFO     | did not find any defunct processes belonging to 2962532
[2025-10-10 18:18:40] 2025-10-10 22:18:07,572 | INFO     | ready for new job
[2025-10-10 18:18:40] 2025-10-10 22:18:07,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 18:18:40] 2025-10-10 22:18:07,577 | INFO     | ***************************************
[2025-10-10 18:18:40] 2025-10-10 22:18:07,578 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 18:18:40] 2025-10-10 22:18:07,578 | INFO     | ***************************************
[2025-10-10 18:18:40] 2025-10-10 22:18:07,578 | INFO     | 
[2025-10-10 18:18:40] 2025-10-10 22:18:07,587 | INFO     | architecture information:
[2025-10-10 18:18:40] 2025-10-10 22:18:07,587 | INFO     | executing command: cat /etc/os-release
[2025-10-10 18:18:40] 2025-10-10 22:18:07,694 | INFO     | cat /etc/os-release:
[2025-10-10 18:18:40] NAME="CentOS Linux"
[2025-10-10 18:18:40] VERSION="7 (Core)"
[2025-10-10 18:18:40] ID="centos"
[2025-10-10 18:18:40] ID_LIKE="rhel fedora"
[2025-10-10 18:18:40] VERSION_ID="7"
[2025-10-10 18:18:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 18:18:40] ANSI_COLOR="0;31"
[2025-10-10 18:18:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 18:18:40] HOME_URL="https://www.centos.org/"
[2025-10-10 18:18:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 18:18:40] 
[2025-10-10 18:18:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 18:18:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 18:18:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 18:18:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 18:18:40] 
[2025-10-10 18:18:40] 2025-10-10 22:18:07,695 | INFO     | ***************************************
[2025-10-10 18:18:40] 2025-10-10 22:18:08,198 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 18:18:40] 2025-10-10 22:18:08,374 | INFO     | sufficient remaining disk space (72299315200 B)
[2025-10-10 18:18:40] 2025-10-10 22:18:08,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 18:18:40] 2025-10-10 22:18:08,375 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 18:18:40] 2025-10-10 22:18:08,375 | INFO     | update_server=False
[2025-10-10 18:18:40] 2025-10-10 22:18:08,375 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 18:18:40] 2025-10-10 22:18:08,375 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:18:40] 2025-10-10 22:18:08,375 | INFO     | aborting loop
[2025-10-10 18:18:40] 2025-10-10 22:18:08,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 18:18:40] 2025-10-10 22:18:08,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:18:40] 2025-10-10 22:18:08,484 | INFO     | all data control threads have been joined
[2025-10-10 18:18:40] 2025-10-10 22:18:09,301 | INFO     | all payload control threads have been joined
[2025-10-10 18:18:40] 2025-10-10 22:18:09,385 | INFO     | [job] retrieve thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:09,385 | INFO     | [job] job monitor thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:09,420 | INFO     | [payload] validate_post thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:09,420 | INFO     | [job] queue monitor thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:09,491 | INFO     | [data] control thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:09,595 | INFO     | all job control threads have been joined
[2025-10-10 18:18:40] 2025-10-10 22:18:09,915 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:09,937 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:09,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:09,937 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:10,106 | INFO     | [job] validate thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:10,307 | INFO     | [payload] control thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:10,383 | INFO     | [data] copytool_out thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:10,611 | INFO     | [job] control thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:10,671 | INFO     | [payload] failed_post thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:10,889 | INFO     | [data] copytool_in thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:10,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 18:18:40] 2025-10-10 22:18:14,962 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 18:18:40] 2025-10-10 22:18:23,024 | INFO     | [monitor] cgroup control has ended
[2025-10-10 18:18:40] 2025-10-10 22:18:24,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898914748224)>', '<ExcThread(monitor, started 139898426226432)>']
[2025-10-10 18:18:40] 2025-10-10 22:18:29,060 | INFO     | all workflow threads have been joined
[2025-10-10 18:18:40] 2025-10-10 22:18:29,061 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 18:18:40] 2025-10-10 22:18:29,061 | INFO     | traces error code: 0
[2025-10-10 18:18:40] 2025-10-10 22:18:29,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 18:18:40] 2025-10-10 22:18:37,850 | INFO     | PID=2945891 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 18:18:40] 2025-10-10 22:18:37,851 | INFO     | .. there are 93 such processes running
[2025-10-10 18:18:40] 2025-10-10 22:18:37,851 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 18:18:40] 2025-10-10 22:18:37,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 18:18:40] 2025-10-10 22:18:37,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 18:18:40] 2025-10-10 22:18:37,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 18:18:40] 2025-10-10 22:18:37,852 | INFO     | [monitor] control thread has ended
[2025-10-10 18:18:40] 2025-10-10 22:18:38,078 [wrapper] ==== pilot stdout END ====
[2025-10-10 18:18:40] 2025-10-10 22:18:38,128 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 18:18:40] 2025-10-10 22:18:38,302 [wrapper] pilotpid: 2945891
[2025-10-10 18:18:40] 2025-10-10 22:18:38,332 [wrapper] Pilot exit status: 0
[2025-10-10 18:18:40] 2025-10-10 22:18:38,467 [wrapper] pandaids: 6837630495
[2025-10-10 18:18:40] 2025-10-10 22:18:39,206 [wrapper] cleanup supervisor_pilot 3972602 2945892
[2025-10-10 18:18:40] 2025-10-10 22:18:39,265 [wrapper] Test setup, not cleaning
[2025-10-10 18:18:40] 2025-10-10 22:18:39,319 [wrapper] apfmon messages muted
[2025-10-10 18:18:40] 2025-10-10 22:18:39,358 [wrapper] ==== wrapper stdout END ====
[2025-10-10 18:18:40] 2025-10-10 22:18:39,372 [wrapper] ==== wrapper stderr END ====
[2025-10-10 18:18:40]  *** Error codes and diagnostics ***
[2025-10-10 18:18:40]     "exeErrorCode": 0,
[2025-10-10 18:18:40]     "exeErrorDiag": "",
[2025-10-10 18:18:40]     "pilotErrorCode": 0,
[2025-10-10 18:18:40]     "pilotErrorDiag": "",
[2025-10-10 18:18:40]  *** Listing of results directory ***
[2025-10-10 18:18:40] total 409952
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 09:04 pilot3.tar.gz
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 09:12 queuedata.json
[2025-10-10 18:18:40] -rwx------. 1 boincer umatlas     36292 Oct 10 09:13 runpilot2-wrapper.sh
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas       100 Oct 10 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 18:18:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 16:42 run_atlas
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas       105 Oct 10 16:42 job.xml
[2025-10-10 18:18:40] -rw-r--r--. 2 boincer umatlas 220223567 Oct 10 16:42 EVNT.46676267._001587.pool.root.1
[2025-10-10 18:18:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 16:42 start_atlas.sh
[2025-10-10 18:18:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 16:42 shared
[2025-10-10 18:18:40] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 16:42 input.tar.gz
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas         0 Oct 10 16:42 boinc_lockfile
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 16:42 pandaJob.out
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas    975533 Oct 10 16:43 agis_schedconf.cvmfs.json
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas   1560580 Oct 10 16:43 agis_ddmendpoints.agis.ALL.json
[2025-10-10 18:18:40] drwx------. 5 boincer umatlas      4096 Oct 10 16:43 pilot3
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas      7160 Oct 10 18:11 init_data.xml
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas 193384855 Oct 10 18:16 HITS.46676269._039115.pool.root.1
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas       529 Oct 10 18:16 boinc_task_state.xml
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas      1036 Oct 10 18:17 memory_monitor_summary.json
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas    391825 Oct 10 18:17 log.46676269._039115.job.log.tgz.1
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas      7784 Oct 10 18:18 heartbeat.json
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 18:18 boinc_mmap_file
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas        27 Oct 10 18:18 wrapper_checkpoint.txt
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas        95 Oct 10 18:18 pilot_heartbeat.json
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas       823 Oct 10 18:18 pilotlog.txt
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas    746645 Oct 10 18:18 log.46676269._039115.job.log.1
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas       357 Oct 10 18:18 output.list
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas       620 Oct 10 18:18 runtime_log
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas   1157120 Oct 10 18:18 result.tar.gz
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas      8700 Oct 10 18:18 runtime_log.err
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas       651 Oct 10 18:18 2sHMDmx6RR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRRdNDmU5sazn.diag
[2025-10-10 18:18:40] -rw-r--r--. 1 boincer umatlas     22420 Oct 10 18:18 stderr.txt
[2025-10-10 18:18:40] HITS file was successfully produced:
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas 193384855 Oct 10 18:16 shared/HITS.pool.root.1
[2025-10-10 18:18:40]  *** Contents of shared directory: ***
[2025-10-10 18:18:40] total 405636
[2025-10-10 18:18:40] -rw-r--r--. 2 boincer umatlas 220223567 Oct 10 16:42 ATLAS.root_0
[2025-10-10 18:18:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 16:42 start_atlas.sh
[2025-10-10 18:18:40] -rw-r--r--. 2 boincer umatlas    569679 Oct 10 16:42 input.tar.gz
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas 193384855 Oct 10 18:16 HITS.pool.root.1
[2025-10-10 18:18:40] -rw-------. 1 boincer umatlas   1157120 Oct 10 18:18 result.tar.gz
18:18:42 (2939689): run_atlas exited; CPU time 22742.626917
18:18:42 (2939689): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN