Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
04:40:00 (1320611): wrapper (7.7.26015): starting
04:40:00 (1320611): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 04:40:00] Arguments: --nthreads 4
[2025-10-11 04:40:00] Threads: 4
[2025-10-11 04:40:00] Checking for CVMFS
[2025-10-11 04:40:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 04:40:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 04:40:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 04:40:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 04:40:08] 2.11.0.0 1320813 0 25192 151577 3 1 2939976 4096001 0 130560 0 0 0.000 1291 588 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 04:40:08] CVMFS is ok
[2025-10-11 04:40:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 04:40:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 04:40:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 04:40:08] Further information can be found at the LHC@home message board.
[2025-10-11 04:40:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 04:40:08] Checking for apptainer binary...
[2025-10-11 04:40:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 04:40:08] Running /usr/bin/apptainer --version
[2025-10-11 04:40:08] apptainer version 1.4.2-1.fc42
[2025-10-11 04:40:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 04:40:09] fedora
[2025-10-11 04:40:09] apptainer works
[2025-10-11 04:40:09] Set ATHENA_PROC_NUMBER=4
[2025-10-11 04:40:09] Set ATHENA_CORE_NUMBER=4
[2025-10-11 04:40:09] Starting ATLAS job with PandaID=6837667223
[2025-10-11 04:40:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:45:56]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:45:56] 2025-10-11 12:45:08,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:45:56] 2025-10-11 12:45:08,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:45:56] 2025-10-11 12:45:08,745 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:45:56] 2025-10-11 12:45:08,745 | INFO     | sum of square deviations: 4340323240.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,746 | INFO     | sum of deviations: -72751656893.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,747 | INFO     | mean x: 1760179368.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,747 | INFO     | mean y: 2391042.1576763485
[2025-10-11 08:45:56] 2025-10-11 12:45:08,747 | INFO     | -- intersect: 29506176444.756767
[2025-10-11 08:45:56] 2025-10-11 12:45:08,747 | INFO     | intersect: 29506176444.756767
[2025-10-11 08:45:56] 2025-10-11 12:45:08,747 | INFO     | chi2: 2.4449170217012446
[2025-10-11 08:45:56] 2025-10-11 12:45:08,748 | INFO     | sum of square deviations: 4075741535.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,749 | INFO     | sum of deviations: -57195890245.00004
[2025-10-11 08:45:56] 2025-10-11 12:45:08,749 | INFO     | mean x: 1760179215.5
[2025-10-11 08:45:56] 2025-10-11 12:45:08,749 | INFO     | mean y: 2399873.7118644067
[2025-10-11 08:45:56] 2025-10-11 12:45:08,749 | INFO     | -- intersect: 24703430681.659863
[2025-10-11 08:45:56] 2025-10-11 12:45:08,749 | INFO     | intersect: 24703430681.659863
[2025-10-11 08:45:56] 2025-10-11 12:45:08,750 | INFO     | chi2: 1.7861731294193328
[2025-10-11 08:45:56] 2025-10-11 12:45:08,750 | INFO     | current chi2=1.7861731294193328 (change=26.94340488592691 %)
[2025-10-11 08:45:56] 2025-10-11 12:45:08,750 | INFO     | sum of square deviations: 3822136780.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,751 | INFO     | sum of deviations: -55737075245.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,751 | INFO     | mean x: 1760179063.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,751 | INFO     | mean y: 2400751.069264069
[2025-10-11 08:45:56] 2025-10-11 12:45:08,752 | INFO     | -- intersect: 25670564536.43348
[2025-10-11 08:45:56] 2025-10-11 12:45:08,752 | INFO     | intersect: 25670564536.43348
[2025-10-11 08:45:56] 2025-10-11 12:45:08,752 | INFO     | chi2: 1.7798350747800156
[2025-10-11 08:45:56] 2025-10-11 12:45:08,752 | INFO     | current chi2=1.7798350747800156 (change=0.3548398828157093 %)
[2025-10-11 08:45:56] 2025-10-11 12:45:08,752 | INFO     | right removable region: 230
[2025-10-11 08:45:56] 2025-10-11 12:45:08,752 | INFO     | sum of square deviations: 4075741535.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,754 | INFO     | sum of deviations: -95796203495.50002
[2025-10-11 08:45:56] 2025-10-11 12:45:08,754 | INFO     | mean x: 1760179520.5
[2025-10-11 08:45:56] 2025-10-11 12:45:08,754 | INFO     | mean y: 2404091.5127118644
[2025-10-11 08:45:56] 2025-10-11 12:45:08,754 | INFO     | -- intersect: 41373652510.09763
[2025-10-11 08:45:56] 2025-10-11 12:45:08,754 | INFO     | intersect: 41373652510.09763
[2025-10-11 08:45:56] 2025-10-11 12:45:08,754 | INFO     | chi2: 1.1709469094669887
[2025-10-11 08:45:56] 2025-10-11 12:45:08,754 | INFO     | current chi2=1.1709469094669887 (change=52.106885465903886 %)
[2025-10-11 08:45:56] 2025-10-11 12:45:08,754 | INFO     | sum of square deviations: 3822136780.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,755 | INFO     | sum of deviations: -84106083006.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,755 | INFO     | mean x: 1760179673.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,755 | INFO     | mean y: 2397059.5887445887
[2025-10-11 08:45:56] 2025-10-11 12:45:08,755 | INFO     | -- intersect: 38735133799.274956
[2025-10-11 08:45:56] 2025-10-11 12:45:08,755 | INFO     | intersect: 38735133799.274956
[2025-10-11 08:45:56] 2025-10-11 12:45:08,755 | INFO     | chi2: 1.1471690243068144
[2025-10-11 08:45:56] 2025-10-11 12:45:08,755 | INFO     | current chi2=1.1471690243068144 (change=2.0306544189093785 %)
[2025-10-11 08:45:56] 2025-10-11 12:45:08,755 | INFO     | left removable region: 20
[2025-10-11 08:45:56] 2025-10-11 12:45:08,756 | INFO     | sum of square deviations: 2871616632.5
[2025-10-11 08:45:56] 2025-10-11 12:45:08,756 | INFO     | sum of deviations: -43500344644.0
[2025-10-11 08:45:56] 2025-10-11 12:45:08,756 | INFO     | mean x: 1760179642.5
[2025-10-11 08:45:56] 2025-10-11 12:45:08,756 | INFO     | mean y: 2390994.657142857
[2025-10-11 08:45:56] 2025-10-11 12:45:08,756 | INFO     | -- intersect: 26666263956.50269
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | intersect: 26666263956.50269
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | chi2: 0.37734802103772014
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | -- intersect: 26666263956.50269
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | current memory leak: -15.15 B/s (using 210 data points, chi2=0.38)
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | could have reported an average CPU frequency of 2866 MHz (12 samples)
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | ..............................
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | . Timing measurements:
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | . get job = 0 s
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | . initial setup = 4 s
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | . payload setup = 3 s
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | . stage-in = 0 s
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | . payload execution = 14652 s
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | . stage-out = 6 s
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | . log creation = 0 s
[2025-10-11 08:45:56] 2025-10-11 12:45:08,757 | INFO     | ..............................
[2025-10-11 08:45:56] 2025-10-11 12:45:09,163 | INFO     | 
[2025-10-11 08:45:56] 2025-10-11 12:45:09,163 | INFO     | job summary report
[2025-10-11 08:45:56] 2025-10-11 12:45:09,163 | INFO     | --------------------------------------------------
[2025-10-11 08:45:56] 2025-10-11 12:45:09,163 | INFO     | PanDA job id: 6837667223
[2025-10-11 08:45:56] 2025-10-11 12:45:09,163 | INFO     | task id: 46676269
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | errors: (none)
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | pilot state: finished 
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | transexitcode: 0
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | exeerrorcode: 0
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | exeerrordiag: 
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | exitcode: 0
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | exitmsg: OK
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | cpuconsumptiontime: 42450 s
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | nevents: 400
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | neventsw: 0
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | pid: 1331222
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | pgrp: 1331222
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | corecount: 4
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | event service: False
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | sizes: {0: 2348854, 3: 2349116, 11: 2349144, 14660: 2380131, 14667: 2389185, 14670: 2389323}
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | --------------------------------------------------
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | 
[2025-10-11 08:45:56] 2025-10-11 12:45:09,164 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-11 08:45:56] 2025-10-11 12:45:09,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,178 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,178 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,178 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:45:56] 2025-10-11 12:45:09,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,180 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:45:56] 2025-10-11 12:45:09,180 | INFO     | job 6837667223 has completed (purged errors)
[2025-10-11 08:45:56] 2025-10-11 12:45:09,180 | INFO     | overall cleanup function is called
[2025-10-11 08:45:56] 2025-10-11 12:45:10,186 | INFO     | --- collectZombieJob: --- 10, [1331222]
[2025-10-11 08:45:56] 2025-10-11 12:45:10,186 | INFO     | zombie collector waiting for pid 1331222
[2025-10-11 08:45:56] 2025-10-11 12:45:10,186 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:45:56] 2025-10-11 12:45:10,186 | INFO     | collected zombie processes
[2025-10-11 08:45:56] 2025-10-11 12:45:10,187 | INFO     | will attempt to kill all subprocesses of pid=1331222
[2025-10-11 08:45:56] 2025-10-11 12:45:10,236 | INFO     | process IDs to be killed: [1331222] (in reverse order)
[2025-10-11 08:45:56] 2025-10-11 12:45:10,263 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:45:56] 2025-10-11 12:45:10,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:45:56] 2025-10-11 12:45:10,265 | INFO     | did not find any defunct processes belonging to 1331222
[2025-10-11 08:45:56] 2025-10-11 12:45:10,266 | INFO     | did not find any defunct processes belonging to 1331222
[2025-10-11 08:45:56] 2025-10-11 12:45:10,267 | INFO     | ready for new job
[2025-10-11 08:45:56] 2025-10-11 12:45:10,267 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:45:56] 2025-10-11 12:45:10,268 | INFO     | ***************************************
[2025-10-11 08:45:56] 2025-10-11 12:45:10,268 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:45:56] 2025-10-11 12:45:10,268 | INFO     | ***************************************
[2025-10-11 08:45:56] 2025-10-11 12:45:10,268 | INFO     | 
[2025-10-11 08:45:56] 2025-10-11 12:45:10,268 | INFO     | architecture information:
[2025-10-11 08:45:56] 2025-10-11 12:45:10,268 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:45:56] 2025-10-11 12:45:10,278 | INFO     | cat /etc/os-release:
[2025-10-11 08:45:56] NAME="CentOS Linux"
[2025-10-11 08:45:56] VERSION="7 (Core)"
[2025-10-11 08:45:56] ID="centos"
[2025-10-11 08:45:56] ID_LIKE="rhel fedora"
[2025-10-11 08:45:56] VERSION_ID="7"
[2025-10-11 08:45:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:45:56] ANSI_COLOR="0;31"
[2025-10-11 08:45:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:45:56] HOME_URL="https://www.centos.org/"
[2025-10-11 08:45:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:45:56] 
[2025-10-11 08:45:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:45:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:45:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:45:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:45:56] 
[2025-10-11 08:45:56] 2025-10-11 12:45:10,278 | INFO     | ***************************************
[2025-10-11 08:45:56] 2025-10-11 12:45:10,781 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-11 08:45:56] 2025-10-11 12:45:10,791 | INFO     | sufficient remaining disk space (340691779584 B)
[2025-10-11 08:45:56] 2025-10-11 12:45:10,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:45:56] 2025-10-11 12:45:10,792 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:45:56] 2025-10-11 12:45:10,792 | INFO     | update_server=False
[2025-10-11 08:45:56] 2025-10-11 12:45:10,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:45:56] 2025-10-11 12:45:10,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:45:56] 2025-10-11 12:45:10,847 | INFO     | all job control threads have been joined
[2025-10-11 08:45:56] 2025-10-11 12:45:10,851 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 08:45:56] 2025-10-11 12:45:10,852 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 08:45:56] 2025-10-11 12:45:10,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:45:56] 2025-10-11 12:45:10,852 | INFO     | will abort loop
[2025-10-11 08:45:56] 2025-10-11 12:45:11,152 | INFO     | all data control threads have been joined
[2025-10-11 08:45:56] 2025-10-11 12:45:11,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:45:56] 2025-10-11 12:45:11,797 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:11,797 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:11,853 | INFO     | [job] control thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:11,855 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:11,896 | INFO     | all payload control threads have been joined
[2025-10-11 08:45:56] 2025-10-11 12:45:12,084 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:12,157 | INFO     | [data] control thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:12,249 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:45:56] 2025-10-11 12:45:12,262 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:12,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:12,619 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:12,671 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:12,821 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:12,839 | INFO     | [job] validate thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:12,900 | INFO     | [payload] control thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:13,258 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:13,610 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:16,255 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:45:56] 2025-10-11 12:45:40,909 | INFO     | PID=1324842 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:45:56] 2025-10-11 12:45:40,910 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:45:56] 2025-10-11 12:45:40,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:45:56] 2025-10-11 12:45:40,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:45:56] 2025-10-11 12:45:49,979 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:45:56] 2025-10-11 12:45:51,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750668453696)>', '<ExcThread(monitor, started 139750040135424)>']
[2025-10-11 08:45:56] 2025-10-11 12:45:51,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:45:56] 2025-10-11 12:45:51,962 | INFO     | [monitor] control thread has ended
[2025-10-11 08:45:56] 2025-10-11 12:45:56,670 | INFO     | all workflow threads have been joined
[2025-10-11 08:45:56] 2025-10-11 12:45:56,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:45:56] 2025-10-11 12:45:56,671 | INFO     | traces error code: 0
[2025-10-11 08:45:56] 2025-10-11 12:45:56,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:45:56] 2025-10-11 12:45:56,744 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:45:56] 2025-10-11 12:45:56,746 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:45:56] 2025-10-11 12:45:56,749 [wrapper] pilotpid: 1324842
[2025-10-11 08:45:56] 2025-10-11 12:45:56,751 [wrapper] Pilot exit status: 0
[2025-10-11 08:45:56] 2025-10-11 12:45:56,759 [wrapper] pandaids: 6837667223
[2025-10-11 08:45:56] 2025-10-11 12:45:56,778 [wrapper] cleanup supervisor_pilot 1355109 1324843
[2025-10-11 08:45:56] 2025-10-11 12:45:56,780 [wrapper] Test setup, not cleaning
[2025-10-11 08:45:56] 2025-10-11 12:45:56,783 [wrapper] apfmon messages muted
[2025-10-11 08:45:56] 2025-10-11 12:45:56,785 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:45:56] 2025-10-11 12:45:56,787 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:45:56]  *** Error codes and diagnostics ***
[2025-10-11 08:45:56]     "exeErrorCode": 0,
[2025-10-11 08:45:56]     "exeErrorDiag": "",
[2025-10-11 08:45:56]     "pilotErrorCode": 0,
[2025-10-11 08:45:56]     "pilotErrorDiag": "",
[2025-10-11 08:45:56]  *** Listing of results directory ***
[2025-10-11 08:45:56] total 413468
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc    557409 Oct 10 10:50 pilot3.tar.gz
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc      5112 Oct 10 11:24 queuedata.json
[2025-10-11 08:45:56] -rwx------. 1 boinc boinc     36292 Oct 10 11:26 runpilot2-wrapper.sh
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc       100 Oct 11 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:45:56] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 04:40 run_atlas
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc       105 Oct 11 04:40 job.xml
[2025-10-11 08:45:56] -rw-r--r--. 2 boinc boinc 220425184 Oct 11 04:40 EVNT.46676267._001648.pool.root.1
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc      6745 Oct 11 04:40 init_data.xml
[2025-10-11 08:45:56] drwxrwx--x. 2 boinc boinc      4096 Oct 11 04:40 shared
[2025-10-11 08:45:56] -rw-r--r--. 2 boinc boinc    569676 Oct 11 04:40 input.tar.gz
[2025-10-11 08:45:56] -rw-r--r--. 2 boinc boinc     15120 Oct 11 04:40 start_atlas.sh
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc         0 Oct 11 04:40 boinc_lockfile
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc      2548 Oct 11 04:40 pandaJob.out
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc    975509 Oct 11 04:40 agis_schedconf.cvmfs.json
[2025-10-11 08:45:56] drwx------. 5 boinc boinc      4096 Oct 11 04:40 pilot3
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc 194204315 Oct 11 08:44 HITS.46676269._040636.pool.root.1
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc       530 Oct 11 08:44 boinc_task_state.xml
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc        95 Oct 11 08:44 pilot_heartbeat.json
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc      1015 Oct 11 08:44 memory_monitor_summary.json
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc   1560580 Oct 11 08:45 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc    386352 Oct 11 08:45 log.46676269._040636.job.log.tgz.1
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc      7758 Oct 11 08:45 heartbeat.json
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc        28 Oct 11 08:45 wrapper_checkpoint.txt
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc      8192 Oct 11 08:45 boinc_mmap_file
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc      4935 Oct 11 08:45 pilotlog.txt
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc   2037413 Oct 11 08:45 log.46676269._040636.job.log.1
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc       357 Oct 11 08:45 output.list
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc       620 Oct 11 08:45 runtime_log
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc   2447360 Oct 11 08:45 result.tar.gz
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc      8659 Oct 11 08:45 runtime_log.err
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc       648 Oct 11 08:45 GpwLDmtBUR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHhdNDmGK3rUm.diag
[2025-10-11 08:45:56] -rw-r--r--. 1 boinc boinc     20937 Oct 11 08:45 stderr.txt
[2025-10-11 08:45:56] HITS file was successfully produced:
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc 194204315 Oct 11 08:44 shared/HITS.pool.root.1
[2025-10-11 08:45:56]  *** Contents of shared directory: ***
[2025-10-11 08:45:56] total 407892
[2025-10-11 08:45:56] -rw-r--r--. 2 boinc boinc 220425184 Oct 11 04:40 ATLAS.root_0
[2025-10-11 08:45:56] -rw-r--r--. 2 boinc boinc    569676 Oct 11 04:40 input.tar.gz
[2025-10-11 08:45:56] -rw-r--r--. 2 boinc boinc     15120 Oct 11 04:40 start_atlas.sh
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc 194204315 Oct 11 08:44 HITS.pool.root.1
[2025-10-11 08:45:56] -rw-------. 1 boinc boinc   2447360 Oct 11 08:45 result.tar.gz
08:45:58 (1320611): run_atlas exited; CPU time 42601.427871
08:45:58 (1320611): called boinc_finish(0)

</stderr_txt>
]]>

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