Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:36:29 (795334): wrapper (7.7.26015): starting
16:36:29 (795334): wrapper: running run_atlas (--nthreads 10)
[2025-10-10 16:36:29] Arguments: --nthreads 10
[2025-10-10 16:36:29] Threads: 10
[2025-10-10 16:36:29] Checking for CVMFS
[2025-10-10 16:36:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 16:36:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 16:36:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 16:36:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 16:36:31] 2.13.2.0 2038924 66176 204880 151560 0 617 29330212 32503808 57120 16776704 0 414865200 99.743 293057332 34838 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 16:36:31] CVMFS is ok
[2025-10-10 16:36:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 16:36:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 16:36:31] Further information can be found at the LHC@home message board.
[2025-10-10 16:36:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 16:36:31] Checking for apptainer binary...
[2025-10-10 16:36:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 16:36:31] Running /usr/bin/apptainer --version
[2025-10-10 16:36:31] apptainer version 1.4.3-1.el9
[2025-10-10 16:36:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 16:36:32] c8-7-1.aglt2.org
[2025-10-10 16:36:32] apptainer works
[2025-10-10 16:36:32] Set ATHENA_PROC_NUMBER=10
[2025-10-10 16:36:32] Set ATHENA_CORE_NUMBER=10
[2025-10-10 16:36:32] Starting ATLAS job with PandaID=6837378602
[2025-10-10 16:36:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 18:33:29]  *** The last 200 lines of the pilot log: ***
[2025-10-10 18:33:30] 2025-10-10 22:32:14,005 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9947734374978
[2025-10-10 18:33:30] 2025-10-10 22:32:14,162 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837378602/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 18:33:30] 2025-10-10 22:32:14,162 | INFO     | extracted standard info from prmon json
[2025-10-10 18:33:30] 2025-10-10 22:32:14,163 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 18:33:30] 2025-10-10 22:32:14,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 18:33:30] 2025-10-10 22:32:14,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 18:33:30] 2025-10-10 22:32:14,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 18:33:30] 2025-10-10 22:32:14,164 | INFO     | fitting pss+swap vs Time
[2025-10-10 18:33:30] 2025-10-10 22:32:14,164 | INFO     | sum of square deviations: 412686807.5
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | sum of deviations: 25329096642.5
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | mean x: 1760132138.5
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | mean y: 2200406.0090909093
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | -- intersect: -108027802563.34122
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | intersect: -108027802563.34122
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | chi2: 4.778844961045523
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | sum of square deviations: 358927660.0
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | sum of deviations: 30858439172.000004
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | mean x: 1760131986.0
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | mean y: 2215332.219047619
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | -- intersect: -151323335405.9786
[2025-10-10 18:33:30] 2025-10-10 22:32:14,165 | INFO     | intersect: -151323335405.9786
[2025-10-10 18:33:30] 2025-10-10 22:32:14,166 | INFO     | chi2: 3.973356046326016
[2025-10-10 18:33:30] 2025-10-10 22:32:14,166 | INFO     | current chi2=3.973356046326016 (change=16.85530544065361 %)
[2025-10-10 18:33:30] 2025-10-10 22:32:14,166 | INFO     | right removable region: 104
[2025-10-10 18:33:30] 2025-10-10 22:32:14,170 | INFO     | sum of square deviations: 358927660.0
[2025-10-10 18:33:30] 2025-10-10 22:32:14,170 | INFO     | sum of deviations: -3882120824.9999995
[2025-10-10 18:33:30] 2025-10-10 22:32:14,170 | INFO     | mean x: 1760132291.0
[2025-10-10 18:33:30] 2025-10-10 22:32:14,170 | INFO     | mean y: 2282833.980952381
[2025-10-10 18:33:30] 2025-10-10 22:32:14,170 | INFO     | -- intersect: 19039673882.76794
[2025-10-10 18:33:30] 2025-10-10 22:32:14,170 | INFO     | intersect: 19039673882.76794
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | chi2: 1.1547932893985646
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | current chi2=1.1547932893985646 (change=75.83530541769413 %)
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | sum of square deviations: 310052325.0
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | sum of deviations: -9116996315.999998
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | mean x: 1760132443.5
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | mean y: 2298762.32
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | -- intersect: 51758469283.09121
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | intersect: 51758469283.09121
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | chi2: 0.9458962612050013
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | current chi2=0.9458962612050013 (change=18.089560279862763 %)
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | left removable region: 20
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | sum of square deviations: 183761585.0
[2025-10-10 18:33:30] 2025-10-10 22:32:14,171 | INFO     | sum of deviations: -1375786771.4999998
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | mean x: 1760132565.5
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | mean y: 2314788.6785714286
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | -- intersect: 13180080422.890188
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | intersect: 13180080422.890188
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | chi2: 0.03503492482270484
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | -- intersect: 13180080422.890188
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | current memory leak: -7.49 B/s (using 84 data points, chi2=0.04)
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | ..............................
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | . Timing measurements:
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | . get job = 0 s
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | . initial setup = 5 s
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | . payload setup = 46 s
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | . stage-in = 0 s
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | . payload execution = 6715 s
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | . stage-out = 2 s
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | . log creation = 0 s
[2025-10-10 18:33:30] 2025-10-10 22:32:14,172 | INFO     | ..............................
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | 
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | job summary report
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | --------------------------------------------------
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | PanDA job id: 6837378602
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | task id: 46676269
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | errors: (none)
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | pilot state: finished 
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | transexitcode: 0
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | exeerrorcode: 0
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | exeerrordiag: 
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | exitcode: 0
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | exitmsg: OK
[2025-10-10 18:33:30] 2025-10-10 22:32:14,795 | INFO     | cpuconsumptiontime: 23740 s
[2025-10-10 18:33:30] 2025-10-10 22:32:14,806 | INFO     | nevents: 400
[2025-10-10 18:33:30] 2025-10-10 22:32:14,806 | INFO     | neventsw: 0
[2025-10-10 18:33:30] 2025-10-10 22:32:14,806 | INFO     | pid: 851987
[2025-10-10 18:33:30] 2025-10-10 22:32:14,806 | INFO     | pgrp: 851987
[2025-10-10 18:33:30] 2025-10-10 22:32:14,806 | INFO     | corecount: 10
[2025-10-10 18:33:30] 2025-10-10 22:32:14,806 | INFO     | event service: False
[2025-10-10 18:33:30] 2025-10-10 22:32:14,806 | INFO     | sizes: {0: 2348027, 1: 2348712, 2: 2348911, 13: 2348911, 24: 2348967, 34: 2349257, 35: 2349413, 6765: 2376523, 6766: 2376522, 6769: 2385576, 6770: 2385632, 6802: 2
[2025-10-10 18:33:30] 2025-10-10 22:32:14,806 | INFO     | --------------------------------------------------
[2025-10-10 18:33:30] 2025-10-10 22:32:14,806 | INFO     | 
[2025-10-10 18:33:30] 2025-10-10 22:32:14,806 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 18:33:30] 2025-10-10 22:32:14,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 18:33:30] 2025-10-10 22:32:14,906 | INFO     | job 6837378602 has completed (purged errors)
[2025-10-10 18:33:30] 2025-10-10 22:32:14,906 | INFO     | overall cleanup function is called
[2025-10-10 18:33:30] 2025-10-10 22:32:14,947 | INFO     | PID=813463 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 18:33:30] 2025-10-10 22:32:14,947 | INFO     | .. there are 81 such processes running
[2025-10-10 18:33:30] 2025-10-10 22:32:15,914 | INFO     | --- collectZombieJob: --- 10, [851987]
[2025-10-10 18:33:30] 2025-10-10 22:32:15,914 | INFO     | zombie collector waiting for pid 851987
[2025-10-10 18:33:30] 2025-10-10 22:32:15,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 18:33:30] 2025-10-10 22:32:15,914 | INFO     | collected zombie processes
[2025-10-10 18:33:30] 2025-10-10 22:32:15,914 | INFO     | will attempt to kill all subprocesses of pid=851987
[2025-10-10 18:33:30] 2025-10-10 22:32:17,502 | INFO     | process IDs to be killed: [851987] (in reverse order)
[2025-10-10 18:33:30] 2025-10-10 22:32:18,848 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 18:33:30] 2025-10-10 22:32:18,848 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 18:33:30] 2025-10-10 22:32:18,909 | INFO     | did not find any defunct processes belonging to 851987
[2025-10-10 18:33:30] 2025-10-10 22:32:19,011 | INFO     | did not find any defunct processes belonging to 851987
[2025-10-10 18:33:30] 2025-10-10 22:32:19,011 | INFO     | ready for new job
[2025-10-10 18:33:30] 2025-10-10 22:32:19,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 18:33:30] 2025-10-10 22:32:19,013 | INFO     | ***************************************
[2025-10-10 18:33:30] 2025-10-10 22:32:19,013 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 18:33:30] 2025-10-10 22:32:19,013 | INFO     | ***************************************
[2025-10-10 18:33:30] 2025-10-10 22:32:19,013 | INFO     | 
[2025-10-10 18:33:30] 2025-10-10 22:32:19,065 | INFO     | architecture information:
[2025-10-10 18:33:30] 2025-10-10 22:32:19,065 | INFO     | executing command: cat /etc/os-release
[2025-10-10 18:33:30] 2025-10-10 22:32:19,196 | INFO     | cat /etc/os-release:
[2025-10-10 18:33:30] NAME="CentOS Linux"
[2025-10-10 18:33:30] VERSION="7 (Core)"
[2025-10-10 18:33:30] ID="centos"
[2025-10-10 18:33:30] ID_LIKE="rhel fedora"
[2025-10-10 18:33:30] VERSION_ID="7"
[2025-10-10 18:33:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 18:33:30] ANSI_COLOR="0;31"
[2025-10-10 18:33:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 18:33:30] HOME_URL="https://www.centos.org/"
[2025-10-10 18:33:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 18:33:30] 
[2025-10-10 18:33:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 18:33:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 18:33:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 18:33:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 18:33:30] 
[2025-10-10 18:33:30] 2025-10-10 22:32:19,196 | INFO     | ***************************************
[2025-10-10 18:33:30] 2025-10-10 22:32:19,699 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 18:33:30] 2025-10-10 22:32:19,803 | INFO     | sufficient remaining disk space (92822044672 B)
[2025-10-10 18:33:30] 2025-10-10 22:32:19,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 18:33:30] 2025-10-10 22:32:19,804 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 18:33:30] 2025-10-10 22:32:19,804 | INFO     | update_server=False
[2025-10-10 18:33:30] 2025-10-10 22:32:19,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 18:33:30] 2025-10-10 22:32:19,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:33:30] 2025-10-10 22:32:19,834 | INFO     | all job control threads have been joined
[2025-10-10 18:33:30] 2025-10-10 22:32:19,990 | INFO     | all data control threads have been joined
[2025-10-10 18:33:30] 2025-10-10 22:32:20,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 18:33:30] 2025-10-10 22:32:20,136 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 18:33:30] 2025-10-10 22:32:20,136 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 18:33:30] 2025-10-10 22:32:20,136 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:33:30] 2025-10-10 22:32:20,136 | INFO     | will abort loop
[2025-10-10 18:33:30] 2025-10-10 22:32:20,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 18:33:30] 2025-10-10 22:32:20,814 | INFO     | [job] retrieve thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:20,815 | INFO     | [job] queue monitor thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:20,840 | INFO     | [job] control thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:21,004 | INFO     | [payload] failed_post thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:21,007 | INFO     | [data] control thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:21,142 | INFO     | [job] job monitor thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:21,278 | INFO     | [job] validate thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:21,278 | INFO     | [data] copytool_in thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:21,317 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:21,329 | INFO     | all payload control threads have been joined
[2025-10-10 18:33:30] 2025-10-10 22:32:21,827 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:21,827 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:21,844 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:22,080 | INFO     | [data] copytool_out thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:22,335 | INFO     | [payload] control thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:22,375 | INFO     | [payload] validate_post thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:24,582 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 18:33:30] 2025-10-10 22:32:49,044 | INFO     | PID=813463 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 18:33:30] 2025-10-10 22:32:49,044 | INFO     | .. there are 80 such processes running
[2025-10-10 18:33:30] 2025-10-10 22:32:49,045 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 18:33:30] 2025-10-10 22:32:49,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 18:33:30] 2025-10-10 22:32:49,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 18:33:30] 2025-10-10 22:32:53,489 | INFO     | [monitor] cgroup control has ended
[2025-10-10 18:33:30] 2025-10-10 22:32:54,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949822277440)>', '<ExcThread(monitor, started 139949328283392)>']
[2025-10-10 18:33:30] 2025-10-10 22:32:55,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 18:33:30] 2025-10-10 22:32:55,081 | INFO     | [monitor] control thread has ended
[2025-10-10 18:33:30] 2025-10-10 22:32:59,691 | INFO     | all workflow threads have been joined
[2025-10-10 18:33:30] 2025-10-10 22:32:59,691 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 18:33:30] 2025-10-10 22:32:59,691 | INFO     | traces error code: 0
[2025-10-10 18:33:30] 2025-10-10 22:32:59,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 18:33:30] 2025-10-10 22:33:00,352 [wrapper] ==== pilot stdout END ====
[2025-10-10 18:33:30] 2025-10-10 22:33:00,372 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 18:33:30] 2025-10-10 22:33:00,404 [wrapper] pilotpid: 813463
[2025-10-10 18:33:30] 2025-10-10 22:33:00,431 [wrapper] Pilot exit status: 0
[2025-10-10 18:33:30] 2025-10-10 22:33:00,533 [wrapper] pandaids: 6837378602
[2025-10-10 18:33:30] 2025-10-10 22:33:00,750 [wrapper] cleanup supervisor_pilot 1811874 813464
[2025-10-10 18:33:30] 2025-10-10 22:33:00,769 [wrapper] Test setup, not cleaning
[2025-10-10 18:33:30] 2025-10-10 22:33:00,789 [wrapper] apfmon messages muted
[2025-10-10 18:33:30] 2025-10-10 22:33:00,809 [wrapper] ==== wrapper stdout END ====
[2025-10-10 18:33:30] 2025-10-10 22:33:00,826 [wrapper] ==== wrapper stderr END ====
[2025-10-10 18:33:30]  *** Error codes and diagnostics ***
[2025-10-10 18:33:30]     "exeErrorCode": 0,
[2025-10-10 18:33:30]     "exeErrorDiag": "",
[2025-10-10 18:33:30]     "pilotErrorCode": 0,
[2025-10-10 18:33:30]     "pilotErrorDiag": "",
[2025-10-10 18:33:30]  *** Listing of results directory ***
[2025-10-10 18:33:30] total 418856
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 21:33 pilot3.tar.gz
[2025-10-10 18:33:30] -rwx------. 1 boincer umatlas     36292 Oct  9 21:34 runpilot2-wrapper.sh
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 21:34 queuedata.json
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas       100 Oct 10 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 18:33:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 16:36 run_atlas
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas       105 Oct 10 16:36 job.xml
[2025-10-10 18:33:30] -rw-r--r--. 2 boincer umatlas 222656576 Oct 10 16:36 EVNT.46676267._001216.pool.root.1
[2025-10-10 18:33:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 16:36 start_atlas.sh
[2025-10-10 18:33:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 16:36 shared
[2025-10-10 18:33:30] -rw-r--r--. 2 boincer umatlas    569673 Oct 10 16:36 input.tar.gz
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas         0 Oct 10 16:36 boinc_lockfile
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 16:36 pandaJob.out
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas    975533 Oct 10 16:37 agis_schedconf.cvmfs.json
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas   1560580 Oct 10 16:37 agis_ddmendpoints.agis.ALL.json
[2025-10-10 18:33:30] drwx------. 5 boincer umatlas      4096 Oct 10 16:37 pilot3
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas      7161 Oct 10 18:27 init_data.xml
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas 199830305 Oct 10 18:30 HITS.46676269._029791.pool.root.1
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas       530 Oct 10 18:31 boinc_task_state.xml
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas      1033 Oct 10 18:31 memory_monitor_summary.json
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas    370860 Oct 10 18:31 log.46676269._029791.job.log.tgz.1
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas      7779 Oct 10 18:32 heartbeat.json
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas        95 Oct 10 18:32 pilot_heartbeat.json
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas      5009 Oct 10 18:32 pilotlog.txt
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas    886031 Oct 10 18:33 log.46676269._029791.job.log.1
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas       357 Oct 10 18:33 output.list
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas       620 Oct 10 18:33 runtime_log
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas   1280000 Oct 10 18:33 result.tar.gz
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas      8695 Oct 10 18:33 runtime_log.err
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas       650 Oct 10 18:33 5XRNDmqCHR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4vbNDmn3nfsm.diag
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas        27 Oct 10 18:33 wrapper_checkpoint.txt
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 18:33 boinc_mmap_file
[2025-10-10 18:33:30] -rw-r--r--. 1 boincer umatlas     21250 Oct 10 18:33 stderr.txt
[2025-10-10 18:33:30] HITS file was successfully produced:
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas 199830305 Oct 10 18:30 shared/HITS.pool.root.1
[2025-10-10 18:33:30]  *** Contents of shared directory: ***
[2025-10-10 18:33:30] total 414420
[2025-10-10 18:33:30] -rw-r--r--. 2 boincer umatlas 222656576 Oct 10 16:36 ATLAS.root_0
[2025-10-10 18:33:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 16:36 start_atlas.sh
[2025-10-10 18:33:30] -rw-r--r--. 2 boincer umatlas    569673 Oct 10 16:36 input.tar.gz
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas 199830305 Oct 10 18:30 HITS.pool.root.1
[2025-10-10 18:33:30] -rw-------. 1 boincer umatlas   1280000 Oct 10 18:33 result.tar.gz
18:33:31 (795334): run_atlas exited; CPU time 24001.831525
18:33:31 (795334): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN