Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:20:33 (1761): wrapper (7.7.26015): starting
16:20:33 (1761): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 16:20:33] Arguments: --nthreads 8
[2025-10-10 16:20:33] Threads: 8
[2025-10-10 16:20:33] Checking for CVMFS
[2025-10-10 16:20:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 16:20:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 16:20:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 16:20:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 16:20:33] 2.11.2.0 2781 4402 70672 151560 2 57 12208838 20275200 1 130560 0 2326317 99.981 276489 36718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 16:20:33] CVMFS is ok
[2025-10-10 16:20:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 16:20:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 16:20:33] Further information can be found at the LHC@home message board.
[2025-10-10 16:20:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 16:20:33] Checking for apptainer binary...
[2025-10-10 16:20:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 16:20:33] Running /usr/bin/apptainer --version
[2025-10-10 16:20:33] apptainer version 1.3.2-1.el7
[2025-10-10 16:20:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 16:20:35] c-115-16.aglt2.org
[2025-10-10 16:20:35] apptainer works
[2025-10-10 16:20:35] Set ATHENA_PROC_NUMBER=8
[2025-10-10 16:20:35] Set ATHENA_CORE_NUMBER=8
[2025-10-10 16:20:35] Starting ATLAS job with PandaID=6836603308
[2025-10-10 16:20:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 18:07:07]  *** The last 200 lines of the pilot log: ***
[2025-10-10 18:07:07] 2025-10-10 22:06:29,197 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 18:07:07] 2025-10-10 22:06:29,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 18:07:07] 2025-10-10 22:06:29,198 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 18:07:07] 2025-10-10 22:06:29,198 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 18:07:07] 2025-10-10 22:06:29,200 | INFO     | fitting pss+swap vs Time
[2025-10-10 18:07:07] 2025-10-10 22:06:29,201 | INFO     | sum of square deviations: 348769330.0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,201 | INFO     | sum of deviations: -11584217200.0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,201 | INFO     | mean x: 1760130823.5
[2025-10-10 18:07:07] 2025-10-10 22:06:29,202 | INFO     | mean y: 2584652.903846154
[2025-10-10 18:07:07] 2025-10-10 22:06:29,202 | INFO     | -- intersect: 58464542187.526695
[2025-10-10 18:07:07] 2025-10-10 22:06:29,202 | INFO     | intersect: 58464542187.526695
[2025-10-10 18:07:07] 2025-10-10 22:06:29,202 | INFO     | chi2: 2.3123520046048034
[2025-10-10 18:07:07] 2025-10-10 22:06:29,202 | INFO     | sum of square deviations: 300842850.0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,203 | INFO     | sum of deviations: -3256068186.9999986
[2025-10-10 18:07:07] 2025-10-10 22:06:29,203 | INFO     | mean x: 1760130671.0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,203 | INFO     | mean y: 2610305.5454545454
[2025-10-10 18:07:07] 2025-10-10 22:06:29,203 | INFO     | -- intersect: 19052773813.85573
[2025-10-10 18:07:07] 2025-10-10 22:06:29,203 | INFO     | intersect: 19052773813.85573
[2025-10-10 18:07:07] 2025-10-10 22:06:29,204 | INFO     | chi2: 1.549986068648638
[2025-10-10 18:07:07] 2025-10-10 22:06:29,204 | INFO     | current chi2=1.549986068648638 (change=32.9692855775416 %)
[2025-10-10 18:07:07] 2025-10-10 22:06:29,204 | INFO     | sum of square deviations: 257521107.5
[2025-10-10 18:07:07] 2025-10-10 22:06:29,204 | INFO     | sum of deviations: -1946466903.5
[2025-10-10 18:07:07] 2025-10-10 22:06:29,204 | INFO     | mean x: 1760130518.5
[2025-10-10 18:07:07] 2025-10-10 22:06:29,205 | INFO     | mean y: 2614919.5212765955
[2025-10-10 18:07:07] 2025-10-10 22:06:29,205 | INFO     | -- intersect: 13306517785.427305
[2025-10-10 18:07:07] 2025-10-10 22:06:29,205 | INFO     | intersect: 13306517785.427305
[2025-10-10 18:07:07] 2025-10-10 22:06:29,205 | INFO     | chi2: 1.5531826561344637
[2025-10-10 18:07:07] 2025-10-10 22:06:29,205 | INFO     | current chi2=1.5531826561344637 (change=-0.20623330431690268 %)
[2025-10-10 18:07:07] 2025-10-10 22:06:29,205 | INFO     | right removable region: 93
[2025-10-10 18:07:07] 2025-10-10 22:06:29,205 | INFO     | sum of square deviations: 300842850.0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,206 | INFO     | sum of deviations: -26911544277.0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,206 | INFO     | mean x: 1760130976.0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,206 | INFO     | mean y: 2632348.414141414
[2025-10-10 18:07:07] 2025-10-10 22:06:29,206 | INFO     | -- intersect: 157453084283.51324
[2025-10-10 18:07:07] 2025-10-10 22:06:29,206 | INFO     | intersect: 157453084283.51324
[2025-10-10 18:07:07] 2025-10-10 22:06:29,207 | INFO     | chi2: 0.8870206839298427
[2025-10-10 18:07:07] 2025-10-10 22:06:29,207 | INFO     | current chi2=0.8870206839298427 (change=61.6398938326243 %)
[2025-10-10 18:07:07] 2025-10-10 22:06:29,207 | INFO     | sum of square deviations: 257521107.5
[2025-10-10 18:07:07] 2025-10-10 22:06:29,207 | INFO     | sum of deviations: -25107867210.5
[2025-10-10 18:07:07] 2025-10-10 22:06:29,207 | INFO     | mean x: 1760131128.5
[2025-10-10 18:07:07] 2025-10-10 22:06:29,208 | INFO     | mean y: 2625969.776595745
[2025-10-10 18:07:07] 2025-10-10 22:06:29,208 | INFO     | -- intersect: 171612398374.33768
[2025-10-10 18:07:07] 2025-10-10 22:06:29,208 | INFO     | intersect: 171612398374.33768
[2025-10-10 18:07:07] 2025-10-10 22:06:29,208 | INFO     | chi2: 0.8811331711212624
[2025-10-10 18:07:07] 2025-10-10 22:06:29,208 | INFO     | current chi2=0.8811331711212624 (change=0.6637401940275278 %)
[2025-10-10 18:07:07] 2025-10-10 22:06:29,208 | INFO     | left removable region: 20
[2025-10-10 18:07:07] 2025-10-10 22:06:29,208 | INFO     | sum of square deviations: 120605052.0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,209 | INFO     | sum of deviations: -11599884439.999998
[2025-10-10 18:07:07] 2025-10-10 22:06:29,209 | INFO     | mean x: 1760131098.0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,209 | INFO     | mean y: 2649110.9315068494
[2025-10-10 18:07:07] 2025-10-10 22:06:29,209 | INFO     | -- intersect: 169293379453.22522
[2025-10-10 18:07:07] 2025-10-10 22:06:29,209 | INFO     | intersect: 169293379453.22522
[2025-10-10 18:07:07] 2025-10-10 22:06:29,209 | INFO     | chi2: 0.06216203888570514
[2025-10-10 18:07:07] 2025-10-10 22:06:29,209 | INFO     | -- intersect: 169293379453.22522
[2025-10-10 18:07:07] 2025-10-10 22:06:29,210 | INFO     | current memory leak: -96.18 B/s (using 73 data points, chi2=0.06)
[2025-10-10 18:07:07] 2025-10-10 22:06:29,210 | INFO     | could have reported an average CPU frequency of 2090 MHz (7 samples)
[2025-10-10 18:07:07] 2025-10-10 22:06:29,210 | INFO     | ..............................
[2025-10-10 18:07:07] 2025-10-10 22:06:29,210 | INFO     | . Timing measurements:
[2025-10-10 18:07:07] 2025-10-10 22:06:29,210 | INFO     | . get job = 0 s
[2025-10-10 18:07:07] 2025-10-10 22:06:29,210 | INFO     | . initial setup = 2 s
[2025-10-10 18:07:07] 2025-10-10 22:06:29,211 | INFO     | . payload setup = 7 s
[2025-10-10 18:07:07] 2025-10-10 22:06:29,211 | INFO     | . stage-in = 0 s
[2025-10-10 18:07:07] 2025-10-10 22:06:29,211 | INFO     | . payload execution = 6301 s
[2025-10-10 18:07:07] 2025-10-10 22:06:29,211 | INFO     | . stage-out = 0 s
[2025-10-10 18:07:07] 2025-10-10 22:06:29,211 | INFO     | . log creation = 0 s
[2025-10-10 18:07:07] 2025-10-10 22:06:29,211 | INFO     | ..............................
[2025-10-10 18:07:07] 2025-10-10 22:06:29,517 | INFO     | 
[2025-10-10 18:07:07] 2025-10-10 22:06:29,518 | INFO     | job summary report
[2025-10-10 18:07:07] 2025-10-10 22:06:29,518 | INFO     | --------------------------------------------------
[2025-10-10 18:07:07] 2025-10-10 22:06:29,518 | INFO     | PanDA job id: 6836603308
[2025-10-10 18:07:07] 2025-10-10 22:06:29,518 | INFO     | task id: 46676269
[2025-10-10 18:07:07] 2025-10-10 22:06:29,519 | INFO     | errors: (none)
[2025-10-10 18:07:07] 2025-10-10 22:06:29,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 18:07:07] 2025-10-10 22:06:29,519 | INFO     | pilot state: finished 
[2025-10-10 18:07:07] 2025-10-10 22:06:29,519 | INFO     | transexitcode: 0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,519 | INFO     | exeerrorcode: 0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,520 | INFO     | exeerrordiag: 
[2025-10-10 18:07:07] 2025-10-10 22:06:29,520 | INFO     | exitcode: 0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,520 | INFO     | exitmsg: OK
[2025-10-10 18:07:07] 2025-10-10 22:06:29,520 | INFO     | cpuconsumptiontime: 47477 s
[2025-10-10 18:07:07] 2025-10-10 22:06:29,520 | INFO     | nevents: 400
[2025-10-10 18:07:07] 2025-10-10 22:06:29,520 | INFO     | neventsw: 0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,521 | INFO     | pid: 12059
[2025-10-10 18:07:07] 2025-10-10 22:06:29,521 | INFO     | pgrp: 12059
[2025-10-10 18:07:07] 2025-10-10 22:06:29,521 | INFO     | corecount: 8
[2025-10-10 18:07:07] 2025-10-10 22:06:29,521 | INFO     | event service: False
[2025-10-10 18:07:07] 2025-10-10 22:06:29,521 | INFO     | sizes: {0: 2348681, 1: 2348880, 6: 2349142, 11: 2349170, 6312: 2376137, 6313: 2385319, 6320: 2385457}
[2025-10-10 18:07:07] 2025-10-10 22:06:29,522 | INFO     | --------------------------------------------------
[2025-10-10 18:07:07] 2025-10-10 22:06:29,522 | INFO     | 
[2025-10-10 18:07:07] 2025-10-10 22:06:29,522 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 18:07:07] 2025-10-10 22:06:29,551 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,552 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,552 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,552 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,552 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,552 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,553 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,554 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 18:07:07] 2025-10-10 22:06:29,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,555 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 18:07:07] 2025-10-10 22:06:29,555 | INFO     | job 6836603308 has completed (purged errors)
[2025-10-10 18:07:07] 2025-10-10 22:06:29,555 | INFO     | overall cleanup function is called
[2025-10-10 18:07:07] 2025-10-10 22:06:30,562 | INFO     | --- collectZombieJob: --- 10, [12059]
[2025-10-10 18:07:07] 2025-10-10 22:06:30,563 | INFO     | zombie collector waiting for pid 12059
[2025-10-10 18:07:07] 2025-10-10 22:06:30,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 18:07:07] 2025-10-10 22:06:30,563 | INFO     | collected zombie processes
[2025-10-10 18:07:07] 2025-10-10 22:06:30,563 | INFO     | will attempt to kill all subprocesses of pid=12059
[2025-10-10 18:07:07] 2025-10-10 22:06:30,651 | INFO     | process IDs to be killed: [12059] (in reverse order)
[2025-10-10 18:07:07] 2025-10-10 22:06:30,706 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 18:07:07] 2025-10-10 22:06:30,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 18:07:07] 2025-10-10 22:06:30,711 | INFO     | did not find any defunct processes belonging to 12059
[2025-10-10 18:07:07] 2025-10-10 22:06:30,715 | INFO     | did not find any defunct processes belonging to 12059
[2025-10-10 18:07:07] 2025-10-10 22:06:30,715 | INFO     | ready for new job
[2025-10-10 18:07:07] 2025-10-10 22:06:30,716 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 18:07:07] 2025-10-10 22:06:30,717 | INFO     | ***************************************
[2025-10-10 18:07:07] 2025-10-10 22:06:30,718 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 18:07:07] 2025-10-10 22:06:30,718 | INFO     | ***************************************
[2025-10-10 18:07:07] 2025-10-10 22:06:30,718 | INFO     | 
[2025-10-10 18:07:07] 2025-10-10 22:06:30,718 | INFO     | architecture information:
[2025-10-10 18:07:07] 2025-10-10 22:06:30,719 | INFO     | executing command: cat /etc/os-release
[2025-10-10 18:07:07] 2025-10-10 22:06:30,738 | INFO     | cat /etc/os-release:
[2025-10-10 18:07:07] NAME="CentOS Linux"
[2025-10-10 18:07:07] VERSION="7 (Core)"
[2025-10-10 18:07:07] ID="centos"
[2025-10-10 18:07:07] ID_LIKE="rhel fedora"
[2025-10-10 18:07:07] VERSION_ID="7"
[2025-10-10 18:07:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 18:07:07] ANSI_COLOR="0;31"
[2025-10-10 18:07:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 18:07:07] HOME_URL="https://www.centos.org/"
[2025-10-10 18:07:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 18:07:07] 
[2025-10-10 18:07:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 18:07:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 18:07:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 18:07:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 18:07:07] 
[2025-10-10 18:07:07] 2025-10-10 22:06:30,739 | INFO     | ***************************************
[2025-10-10 18:07:07] 2025-10-10 22:06:31,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 18:07:07] 2025-10-10 22:06:31,265 | INFO     | sufficient remaining disk space (18596495360 B)
[2025-10-10 18:07:07] 2025-10-10 22:06:31,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 18:07:07] 2025-10-10 22:06:31,266 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 18:07:07] 2025-10-10 22:06:31,267 | INFO     | update_server=False
[2025-10-10 18:07:07] 2025-10-10 22:06:31,267 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 18:07:07] 2025-10-10 22:06:31,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:07:07] 2025-10-10 22:06:31,328 | INFO     | all data control threads have been joined
[2025-10-10 18:07:07] 2025-10-10 22:06:31,413 | INFO     | all job control threads have been joined
[2025-10-10 18:07:07] 2025-10-10 22:06:31,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 18:07:07] 2025-10-10 22:06:31,624 | INFO     | aborting loop
[2025-10-10 18:07:07] 2025-10-10 22:06:31,828 | INFO     | all payload control threads have been joined
[2025-10-10 18:07:07] 2025-10-10 22:06:32,272 | INFO     | [job] retrieve thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:32,273 | INFO     | [job] queue monitor thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:32,334 | INFO     | [data] control thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:32,413 | INFO     | [job] control thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:32,452 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:32,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 18:07:07] 2025-10-10 22:06:32,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 18:07:07] 2025-10-10 22:06:32,629 | INFO     | [job] job monitor thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:32,829 | INFO     | [payload] control thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:33,013 | INFO     | [job] validate thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:33,019 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:33,111 | INFO     | [data] copytool_in thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:33,224 | INFO     | [payload] validate_post thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:33,321 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:33,324 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:33,447 | INFO     | [payload] failed_post thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:34,459 | INFO     | [data] copytool_out thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:06:36,541 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 18:07:07] 2025-10-10 22:07:01,029 | INFO     | PID=5640 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-10 18:07:07] 2025-10-10 22:07:01,029 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 18:07:07] 2025-10-10 22:07:01,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 18:07:07] 2025-10-10 22:07:01,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 18:07:07] 2025-10-10 22:07:01,772 | INFO     | [monitor] cgroup control has ended
[2025-10-10 18:07:07] 2025-10-10 22:07:02,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861580183360)>', '<ExcThread(monitor, started 139861281453824)>']
[2025-10-10 18:07:07] 2025-10-10 22:07:03,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 18:07:07] 2025-10-10 22:07:03,037 | INFO     | [monitor] control thread has ended
[2025-10-10 18:07:07] 2025-10-10 22:07:07,567 | INFO     | all workflow threads have been joined
[2025-10-10 18:07:07] 2025-10-10 22:07:07,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 18:07:07] 2025-10-10 22:07:07,567 | INFO     | traces error code: 0
[2025-10-10 18:07:07] 2025-10-10 22:07:07,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 18:07:07] 2025-10-10 22:07:07,676 [wrapper] ==== pilot stdout END ====
[2025-10-10 18:07:07] 2025-10-10 22:07:07,681 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 18:07:07] 2025-10-10 22:07:07,686 [wrapper] pilotpid: 5640
[2025-10-10 18:07:07] 2025-10-10 22:07:07,691 [wrapper] Pilot exit status: 0
[2025-10-10 18:07:07] 2025-10-10 22:07:07,708 [wrapper] pandaids: 6836603308
[2025-10-10 18:07:07] 2025-10-10 22:07:07,751 [wrapper] cleanup supervisor_pilot 11163 5641
[2025-10-10 18:07:07] 2025-10-10 22:07:07,756 [wrapper] Test setup, not cleaning
[2025-10-10 18:07:07] 2025-10-10 22:07:07,761 [wrapper] apfmon messages muted
[2025-10-10 18:07:07] 2025-10-10 22:07:07,765 [wrapper] ==== wrapper stdout END ====
[2025-10-10 18:07:07] 2025-10-10 22:07:07,770 [wrapper] ==== wrapper stderr END ====
[2025-10-10 18:07:07]  *** Error codes and diagnostics ***
[2025-10-10 18:07:07]     "exeErrorCode": 0,
[2025-10-10 18:07:07]     "exeErrorDiag": "",
[2025-10-10 18:07:07]     "pilotErrorCode": 0,
[2025-10-10 18:07:07]     "pilotErrorDiag": "",
[2025-10-10 18:07:07]  *** Listing of results directory ***
[2025-10-10 18:07:07] total 403456
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas    557409 Oct  8 18:57 pilot3.tar.gz
[2025-10-10 18:07:07] -rwx------ 1 boincer umatlas     36292 Oct  8 19:03 runpilot2-wrapper.sh
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas      5112 Oct  8 19:05 queuedata.json
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas       100 Oct 10 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 18:07:07] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 16:20 run_atlas
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas       105 Oct 10 16:20 job.xml
[2025-10-10 18:07:07] -rw-r--r-- 2 boincer umatlas 222730189 Oct 10 16:20 EVNT.46676267._000387.pool.root.1
[2025-10-10 18:07:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 16:20 start_atlas.sh
[2025-10-10 18:07:07] drwxrwx--x 2 boincer umatlas      4096 Oct 10 16:20 shared
[2025-10-10 18:07:07] -rw-r--r-- 2 boincer umatlas    569678 Oct 10 16:20 input.tar.gz
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas         0 Oct 10 16:20 boinc_lockfile
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas      2548 Oct 10 16:20 pandaJob.out
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas    975533 Oct 10 16:20 agis_schedconf.cvmfs.json
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas   1560580 Oct 10 16:20 agis_ddmendpoints.agis.ALL.json
[2025-10-10 18:07:07] drwx------ 5 boincer umatlas      4096 Oct 10 16:20 pilot3
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas      5909 Oct 10 18:03 init_data.xml
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas 184009966 Oct 10 18:05 HITS.46676269._009578.pool.root.1
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas       529 Oct 10 18:06 boinc_task_state.xml
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas        95 Oct 10 18:06 pilot_heartbeat.json
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas      1050 Oct 10 18:06 memory_monitor_summary.json
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas    344937 Oct 10 18:06 log.46676269._009578.job.log.tgz.1
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas      7848 Oct 10 18:06 heartbeat.json
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 18:06 boinc_mmap_file
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas        27 Oct 10 18:06 wrapper_checkpoint.txt
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas      4745 Oct 10 18:07 pilotlog.txt
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas    900843 Oct 10 18:07 log.46676269._009578.job.log.1
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas       357 Oct 10 18:07 output.list
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas       620 Oct 10 18:07 runtime_log
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas   1269760 Oct 10 18:07 result.tar.gz
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas      8703 Oct 10 18:07 runtime_log.err
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas       658 Oct 10 18:07 KCgKDmXNsQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhcYNDmFyUPQm.diag
[2025-10-10 18:07:07] -rw-r--r-- 1 boincer umatlas     20841 Oct 10 18:07 stderr.txt
[2025-10-10 18:07:07] HITS file was successfully produced:
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas 184009966 Oct 10 18:05 shared/HITS.pool.root.1
[2025-10-10 18:07:07]  *** Contents of shared directory: ***
[2025-10-10 18:07:07] total 399032
[2025-10-10 18:07:07] -rw-r--r-- 2 boincer umatlas 222730189 Oct 10 16:20 ATLAS.root_0
[2025-10-10 18:07:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 16:20 start_atlas.sh
[2025-10-10 18:07:07] -rw-r--r-- 2 boincer umatlas    569678 Oct 10 16:20 input.tar.gz
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas 184009966 Oct 10 18:05 HITS.pool.root.1
[2025-10-10 18:07:07] -rw------- 1 boincer umatlas   1269760 Oct 10 18:07 result.tar.gz
18:07:09 (1761): run_atlas exited; CPU time 47487.327321
18:07:09 (1761): called boinc_finish(0)

</stderr_txt>
]]>

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