Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:49:17 (1322639): wrapper (7.7.26015): starting
18:49:17 (1322639): wrapper: running run_atlas (--nthreads 11)
[2025-10-10 18:49:17] Arguments: --nthreads 11
[2025-10-10 18:49:17] Threads: 11
[2025-10-10 18:49:17] Checking for CVMFS
[2025-10-10 18:49:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 18:49:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 18:49:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 18:49:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 18:49:18] 2.13.2.0 1756961 92168 278804 151564 3 66 22998254 32935936 21928 16776704 0 96495097 99.687 79800088 29853 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 18:49:18] CVMFS is ok
[2025-10-10 18:49:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 18:49:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 18:49:18] Further information can be found at the LHC@home message board.
[2025-10-10 18:49:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 18:49:18] Checking for apptainer binary...
[2025-10-10 18:49:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 18:49:18] Running /usr/bin/apptainer --version
[2025-10-10 18:49:19] apptainer version 1.4.3-1.el9
[2025-10-10 18:49:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 18:49:19] c-5-5.aglt2.org
[2025-10-10 18:49:19] apptainer works
[2025-10-10 18:49:19] Set ATHENA_PROC_NUMBER=11
[2025-10-10 18:49:19] Set ATHENA_CORE_NUMBER=11
[2025-10-10 18:49:19] Starting ATLAS job with PandaID=6837663284
[2025-10-10 18:49:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 22:11:53]  *** The last 200 lines of the pilot log: ***
[2025-10-10 22:11:53] 2025-10-11 02:11:18,276 | INFO     | time since job start (12060s) is within the limit (172800.0s)
[2025-10-10 22:11:53] 2025-10-11 02:11:18,586 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-10 22:11:53] 2025-10-11 02:11:18,601 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.155575000001
[2025-10-10 22:11:53] 2025-10-11 02:11:18,638 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837663284/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 22:11:53] 2025-10-11 02:11:18,639 | INFO     | extracted standard info from prmon json
[2025-10-10 22:11:53] 2025-10-11 02:11:18,639 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 22:11:53] 2025-10-11 02:11:18,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 22:11:53] 2025-10-11 02:11:18,640 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 22:11:53] 2025-10-11 02:11:18,640 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 22:11:53] 2025-10-11 02:11:18,644 | INFO     | fitting pss+swap vs Time
[2025-10-10 22:11:53] 2025-10-11 02:11:18,645 | INFO     | sum of square deviations: 2334691569.5306234
[2025-10-10 22:11:53] 2025-10-11 02:11:18,646 | INFO     | sum of deviations: 7190972263.081625
[2025-10-10 22:11:53] 2025-10-11 02:11:18,647 | INFO     | mean x: 1760142684.8877552
[2025-10-10 22:11:53] 2025-10-11 02:11:18,647 | INFO     | mean y: 2274718.8673469387
[2025-10-10 22:11:53] 2025-10-11 02:11:18,647 | INFO     | -- intersect: -5419056899.954798
[2025-10-10 22:11:53] 2025-10-11 02:11:18,647 | INFO     | intersect: -5419056899.954798
[2025-10-10 22:11:53] 2025-10-11 02:11:18,651 | INFO     | chi2: 2.909552592118277
[2025-10-10 22:11:53] 2025-10-11 02:11:18,652 | INFO     | sum of square deviations: 2160553343.759156
[2025-10-10 22:11:53] 2025-10-11 02:11:18,653 | INFO     | sum of deviations: 20858075247.486923
[2025-10-10 22:11:53] 2025-10-11 02:11:18,653 | INFO     | mean x: 1760142532.3979058
[2025-10-10 22:11:53] 2025-10-11 02:11:18,654 | INFO     | mean y: 2286469.717277487
[2025-10-10 22:11:53] 2025-10-11 02:11:18,654 | INFO     | -- intersect: -16990205519.941387
[2025-10-10 22:11:53] 2025-10-11 02:11:18,654 | INFO     | intersect: -16990205519.941387
[2025-10-10 22:11:53] 2025-10-11 02:11:18,654 | INFO     | chi2: 2.217005056137051
[2025-10-10 22:11:53] 2025-10-11 02:11:18,654 | INFO     | current chi2=2.217005056137051 (change=23.802544001344977 %)
[2025-10-10 22:11:53] 2025-10-11 02:11:18,655 | INFO     | right removable region: 190
[2025-10-10 22:11:53] 2025-10-11 02:11:18,655 | INFO     | sum of square deviations: 2160506983.759156
[2025-10-10 22:11:53] 2025-10-11 02:11:18,660 | INFO     | sum of deviations: -29662874456.691097
[2025-10-10 22:11:53] 2025-10-11 02:11:18,661 | INFO     | mean x: 1760142837.3979058
[2025-10-10 22:11:53] 2025-10-11 02:11:18,661 | INFO     | mean y: 2306773.272251309
[2025-10-10 22:11:53] 2025-10-11 02:11:18,661 | INFO     | -- intersect: 24168345765.071396
[2025-10-10 22:11:53] 2025-10-11 02:11:18,661 | INFO     | intersect: 24168345765.071396
[2025-10-10 22:11:53] 2025-10-11 02:11:18,661 | INFO     | chi2: 0.9748002611499507
[2025-10-10 22:11:53] 2025-10-11 02:11:18,661 | INFO     | current chi2=0.9748002611499507 (change=66.4965581378182 %)
[2025-10-10 22:11:53] 2025-10-11 02:11:18,662 | INFO     | sum of square deviations: 1995206285.4462366
[2025-10-10 22:11:53] 2025-10-11 02:11:18,663 | INFO     | sum of deviations: -31661405646.69893
[2025-10-10 22:11:53] 2025-10-11 02:11:18,663 | INFO     | mean x: 1760142989.9086022
[2025-10-10 22:11:53] 2025-10-11 02:11:18,663 | INFO     | mean y: 2308519.311827957
[2025-10-10 22:11:53] 2025-10-11 02:11:18,663 | INFO     | -- intersect: 27933556333.733086
[2025-10-10 22:11:53] 2025-10-11 02:11:18,664 | INFO     | intersect: 27933556333.733086
[2025-10-10 22:11:53] 2025-10-11 02:11:18,664 | INFO     | chi2: 0.8991166695175435
[2025-10-10 22:11:53] 2025-10-11 02:11:18,664 | INFO     | current chi2=0.8991166695175435 (change=7.764010192521371 %)
[2025-10-10 22:11:53] 2025-10-11 02:11:18,664 | INFO     | left removable region: 20
[2025-10-10 22:11:53] 2025-10-11 02:11:18,664 | INFO     | sum of square deviations: 1523346086.847067
[2025-10-10 22:11:53] 2025-10-11 02:11:18,666 | INFO     | sum of deviations: -2613560152.2588224
[2025-10-10 22:11:53] 2025-10-11 02:11:18,666 | INFO     | mean x: 1760143111.9176471
[2025-10-10 22:11:53] 2025-10-11 02:11:18,666 | INFO     | mean y: 2306851.5529411766
[2025-10-10 22:11:53] 2025-10-11 02:11:18,666 | INFO     | -- intersect: 3022132706.8200865
[2025-10-10 22:11:53] 2025-10-11 02:11:18,666 | INFO     | intersect: 3022132706.8200865
[2025-10-10 22:11:53] 2025-10-11 02:11:18,666 | INFO     | chi2: 0.07076425108112944
[2025-10-10 22:11:53] 2025-10-11 02:11:18,667 | INFO     | -- intersect: 3022132706.8200865
[2025-10-10 22:11:53] 2025-10-11 02:11:18,667 | INFO     | current memory leak: -1.72 B/s (using 170 data points, chi2=0.07)
[2025-10-10 22:11:53] 2025-10-11 02:11:18,667 | INFO     | could have reported an average CPU frequency of 2600 MHz (10 samples)
[2025-10-10 22:11:53] 2025-10-11 02:11:18,668 | INFO     | ..............................
[2025-10-10 22:11:53] 2025-10-11 02:11:18,668 | INFO     | . Timing measurements:
[2025-10-10 22:11:53] 2025-10-11 02:11:18,668 | INFO     | . get job = 0 s
[2025-10-10 22:11:53] 2025-10-11 02:11:18,668 | INFO     | . initial setup = 4 s
[2025-10-10 22:11:53] 2025-10-11 02:11:18,668 | INFO     | . payload setup = 35 s
[2025-10-10 22:11:53] 2025-10-11 02:11:18,668 | INFO     | . stage-in = 0 s
[2025-10-10 22:11:53] 2025-10-11 02:11:18,668 | INFO     | . payload execution = 11944 s
[2025-10-10 22:11:53] 2025-10-11 02:11:18,668 | INFO     | . stage-out = 3 s
[2025-10-10 22:11:53] 2025-10-11 02:11:18,669 | INFO     | . log creation = 0 s
[2025-10-10 22:11:53] 2025-10-11 02:11:18,669 | INFO     | ..............................
[2025-10-10 22:11:53] 2025-10-11 02:11:18,833 | INFO     | 
[2025-10-10 22:11:53] 2025-10-11 02:11:18,834 | INFO     | job summary report
[2025-10-10 22:11:53] 2025-10-11 02:11:18,834 | INFO     | --------------------------------------------------
[2025-10-10 22:11:53] 2025-10-11 02:11:18,834 | INFO     | PanDA job id: 6837663284
[2025-10-10 22:11:53] 2025-10-11 02:11:18,834 | INFO     | task id: 46676269
[2025-10-10 22:11:53] 2025-10-11 02:11:18,840 | INFO     | errors: (none)
[2025-10-10 22:11:53] 2025-10-11 02:11:18,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 22:11:53] 2025-10-11 02:11:18,840 | INFO     | pilot state: finished 
[2025-10-10 22:11:53] 2025-10-11 02:11:18,840 | INFO     | transexitcode: 0
[2025-10-10 22:11:53] 2025-10-11 02:11:18,841 | INFO     | exeerrorcode: 0
[2025-10-10 22:11:53] 2025-10-11 02:11:18,841 | INFO     | exeerrordiag: 
[2025-10-10 22:11:53] 2025-10-11 02:11:18,841 | INFO     | exitcode: 0
[2025-10-10 22:11:53] 2025-10-11 02:11:18,841 | INFO     | exitmsg: OK
[2025-10-10 22:11:53] 2025-10-11 02:11:18,841 | INFO     | cpuconsumptiontime: 49103 s
[2025-10-10 22:11:53] 2025-10-11 02:11:18,841 | INFO     | nevents: 400
[2025-10-10 22:11:53] 2025-10-11 02:11:18,841 | INFO     | neventsw: 0
[2025-10-10 22:11:53] 2025-10-11 02:11:18,841 | INFO     | pid: 1345296
[2025-10-10 22:11:53] 2025-10-11 02:11:18,841 | INFO     | pgrp: 1345296
[2025-10-10 22:11:53] 2025-10-11 02:11:18,842 | INFO     | corecount: 11
[2025-10-10 22:11:53] 2025-10-11 02:11:18,842 | INFO     | event service: False
[2025-10-10 22:11:53] 2025-10-11 02:11:18,842 | INFO     | sizes: {0: 2348685, 1: 2348884, 2: 2348884, 12: 2348912, 23: 2348940, 25: 2349230, 34: 2349386, 11983: 2379146, 11984: 2379145, 11987: 2388199, 11989: 2388255, 120
[2025-10-10 22:11:53] 2025-10-11 02:11:18,842 | INFO     | --------------------------------------------------
[2025-10-10 22:11:53] 2025-10-11 02:11:18,842 | INFO     | 
[2025-10-10 22:11:53] 2025-10-11 02:11:18,842 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-10 22:11:53] 2025-10-11 02:11:18,883 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,884 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,884 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,884 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,884 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,885 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,885 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,885 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,885 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,885 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,885 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,885 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,886 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 22:11:53] 2025-10-11 02:11:18,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,886 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 22:11:53] 2025-10-11 02:11:18,886 | INFO     | job 6837663284 has completed (purged errors)
[2025-10-10 22:11:53] 2025-10-11 02:11:18,886 | INFO     | overall cleanup function is called
[2025-10-10 22:11:53] 2025-10-11 02:11:19,896 | INFO     | --- collectZombieJob: --- 10, [1345296]
[2025-10-10 22:11:53] 2025-10-11 02:11:19,896 | INFO     | zombie collector waiting for pid 1345296
[2025-10-10 22:11:53] 2025-10-11 02:11:19,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 22:11:53] 2025-10-11 02:11:19,897 | INFO     | collected zombie processes
[2025-10-10 22:11:53] 2025-10-11 02:11:19,897 | INFO     | will attempt to kill all subprocesses of pid=1345296
[2025-10-10 22:11:53] 2025-10-11 02:11:20,659 | INFO     | process IDs to be killed: [1345296] (in reverse order)
[2025-10-10 22:11:53] 2025-10-11 02:11:20,874 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 22:11:53] 2025-10-11 02:11:20,878 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 22:11:53] 2025-10-11 02:11:20,922 | INFO     | did not find any defunct processes belonging to 1345296
[2025-10-10 22:11:53] 2025-10-11 02:11:21,003 | INFO     | did not find any defunct processes belonging to 1345296
[2025-10-10 22:11:53] 2025-10-11 02:11:21,015 | INFO     | ready for new job
[2025-10-10 22:11:53] 2025-10-11 02:11:21,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 22:11:53] 2025-10-11 02:11:21,018 | INFO     | ***************************************
[2025-10-10 22:11:53] 2025-10-11 02:11:21,018 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 22:11:53] 2025-10-11 02:11:21,018 | INFO     | ***************************************
[2025-10-10 22:11:53] 2025-10-11 02:11:21,018 | INFO     | 
[2025-10-10 22:11:53] 2025-10-11 02:11:21,035 | INFO     | architecture information:
[2025-10-10 22:11:53] 2025-10-11 02:11:21,036 | INFO     | executing command: cat /etc/os-release
[2025-10-10 22:11:53] 2025-10-11 02:11:21,110 | INFO     | cat /etc/os-release:
[2025-10-10 22:11:53] NAME="CentOS Linux"
[2025-10-10 22:11:53] VERSION="7 (Core)"
[2025-10-10 22:11:53] ID="centos"
[2025-10-10 22:11:53] ID_LIKE="rhel fedora"
[2025-10-10 22:11:53] VERSION_ID="7"
[2025-10-10 22:11:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 22:11:53] ANSI_COLOR="0;31"
[2025-10-10 22:11:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 22:11:53] HOME_URL="https://www.centos.org/"
[2025-10-10 22:11:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 22:11:53] 
[2025-10-10 22:11:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 22:11:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 22:11:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 22:11:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 22:11:53] 
[2025-10-10 22:11:53] 2025-10-11 02:11:21,112 | INFO     | ***************************************
[2025-10-10 22:11:53] 2025-10-11 02:11:21,617 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-10 22:11:53] 2025-10-11 02:11:21,706 | INFO     | sufficient remaining disk space (75845599232 B)
[2025-10-10 22:11:53] 2025-10-11 02:11:21,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 22:11:53] 2025-10-11 02:11:21,707 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 22:11:53] 2025-10-11 02:11:21,707 | INFO     | update_server=False
[2025-10-10 22:11:53] 2025-10-11 02:11:21,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 22:11:53] 2025-10-11 02:11:21,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 22:11:53] 2025-10-11 02:11:21,880 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 22:11:53] 2025-10-11 02:11:21,881 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 22:11:53] 2025-10-11 02:11:21,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 22:11:53] 2025-10-11 02:11:21,881 | INFO     | will abort loop
[2025-10-10 22:11:53] 2025-10-11 02:11:21,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 22:11:53] 2025-10-11 02:11:22,212 | INFO     | all payload control threads have been joined
[2025-10-10 22:11:53] 2025-10-11 02:11:22,297 | INFO     | all data control threads have been joined
[2025-10-10 22:11:53] 2025-10-11 02:11:22,722 | INFO     | [job] retrieve thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:22,858 | INFO     | [data] copytool_in thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:22,859 | INFO     | [job] validate thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:22,860 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:22,885 | INFO     | [job] job monitor thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:22,973 | INFO     | all job control threads have been joined
[2025-10-10 22:11:53] 2025-10-11 02:11:23,219 | INFO     | [payload] control thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:23,303 | INFO     | [data] control thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:23,325 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:23,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:23,445 | INFO     | [payload] failed_post thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:23,641 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:23,717 | INFO     | [data] copytool_out thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:23,861 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 22:11:53] 2025-10-11 02:11:23,979 | INFO     | [job] control thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:24,044 | INFO     | [payload] validate_post thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:24,867 | INFO     | [job] queue monitor thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:25,894 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 22:11:53] 2025-10-11 02:11:38,708 | INFO     | [monitor] cgroup control has ended
[2025-10-10 22:11:53] 2025-10-11 02:11:40,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140408018093888)>', '<ExcThread(monitor, started 140407287564032)>']
[2025-10-10 22:11:53] 2025-10-11 02:11:45,190 | INFO     | all workflow threads have been joined
[2025-10-10 22:11:53] 2025-10-11 02:11:45,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 22:11:53] 2025-10-11 02:11:45,191 | INFO     | traces error code: 0
[2025-10-10 22:11:53] 2025-10-11 02:11:45,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 22:11:53] 2025-10-11 02:11:52,132 | INFO     | PID=1330680 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 22:11:53] 2025-10-11 02:11:52,137 | INFO     | .. there are 35 such processes running
[2025-10-10 22:11:53] 2025-10-11 02:11:52,138 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 22:11:53] 2025-10-11 02:11:52,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 22:11:53] 2025-10-11 02:11:52,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 22:11:53] 2025-10-11 02:11:52,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 22:11:53] 2025-10-11 02:11:52,138 | INFO     | [monitor] control thread has ended
[2025-10-10 22:11:53] 2025-10-11 02:11:52,533 [wrapper] ==== pilot stdout END ====
[2025-10-10 22:11:53] 2025-10-11 02:11:52,579 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 22:11:53] 2025-10-11 02:11:52,605 [wrapper] pilotpid: 1330680
[2025-10-10 22:11:53] 2025-10-11 02:11:52,631 [wrapper] Pilot exit status: 0
[2025-10-10 22:11:53] 2025-10-11 02:11:52,801 [wrapper] pandaids: 6837663284
[2025-10-10 22:11:53] 2025-10-11 02:11:53,012 [wrapper] cleanup supervisor_pilot 1830276 1330681
[2025-10-10 22:11:53] 2025-10-11 02:11:53,016 [wrapper] Test setup, not cleaning
[2025-10-10 22:11:53] 2025-10-11 02:11:53,019 [wrapper] apfmon messages muted
[2025-10-10 22:11:53] 2025-10-11 02:11:53,021 [wrapper] ==== wrapper stdout END ====
[2025-10-10 22:11:53] 2025-10-11 02:11:53,030 [wrapper] ==== wrapper stderr END ====
[2025-10-10 22:11:53]  *** Error codes and diagnostics ***
[2025-10-10 22:11:53]     "exeErrorCode": 0,
[2025-10-10 22:11:53]     "exeErrorDiag": "",
[2025-10-10 22:11:53]     "pilotErrorCode": 0,
[2025-10-10 22:11:53]     "pilotErrorDiag": "",
[2025-10-10 22:11:53]  *** Listing of results directory ***
[2025-10-10 22:11:53] total 415152
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 10:46 pilot3.tar.gz
[2025-10-10 22:11:53] -rwx------. 1 boincer umatlas     36292 Oct 10 10:47 runpilot2-wrapper.sh
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 10:47 queuedata.json
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas       100 Oct 10 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 22:11:53] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 18:49 run_atlas
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas       105 Oct 10 18:49 job.xml
[2025-10-10 22:11:53] -rw-r--r--. 2 boincer umatlas 223572783 Oct 10 18:49 EVNT.46676267._001636.pool.root.1
[2025-10-10 22:11:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:49 start_atlas.sh
[2025-10-10 22:11:53] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 18:49 shared
[2025-10-10 22:11:53] -rw-r--r--. 2 boincer umatlas    569674 Oct 10 18:49 input.tar.gz
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas         0 Oct 10 18:49 boinc_lockfile
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas      2549 Oct 10 18:49 pandaJob.out
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas    975517 Oct 10 18:50 agis_schedconf.cvmfs.json
[2025-10-10 22:11:53] drwx------. 5 boincer umatlas      4096 Oct 10 18:50 pilot3
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas 193510889 Oct 10 22:10 HITS.46676269._040340.pool.root.1
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas       531 Oct 10 22:10 boinc_task_state.xml
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas        95 Oct 10 22:10 pilot_heartbeat.json
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas      1042 Oct 10 22:10 memory_monitor_summary.json
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas   1560580 Oct 10 22:11 agis_ddmendpoints.agis.ALL.json
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas    470844 Oct 10 22:11 log.46676269._040340.job.log.tgz.1
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas      7824 Oct 10 22:11 heartbeat.json
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas      6659 Oct 10 22:11 init_data.xml
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas       823 Oct 10 22:11 pilotlog.txt
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 22:11 boinc_mmap_file
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas        28 Oct 10 22:11 wrapper_checkpoint.txt
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas   1594358 Oct 10 22:11 log.46676269._040340.job.log.1
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas       357 Oct 10 22:11 output.list
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas       620 Oct 10 22:11 runtime_log
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas   2088960 Oct 10 22:11 result.tar.gz
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas      8691 Oct 10 22:11 runtime_log.err
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas       652 Oct 10 22:11 jppLDm1ZTR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIedNDmsSxmWm.diag
[2025-10-10 22:11:53] -rw-r--r--. 1 boincer umatlas     21231 Oct 10 22:11 stderr.txt
[2025-10-10 22:11:53] HITS file was successfully produced:
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas 193510889 Oct 10 22:10 shared/HITS.pool.root.1
[2025-10-10 22:11:53]  *** Contents of shared directory: ***
[2025-10-10 22:11:53] total 409932
[2025-10-10 22:11:53] -rw-r--r--. 2 boincer umatlas 223572783 Oct 10 18:49 ATLAS.root_0
[2025-10-10 22:11:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 18:49 start_atlas.sh
[2025-10-10 22:11:53] -rw-r--r--. 2 boincer umatlas    569674 Oct 10 18:49 input.tar.gz
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas 193510889 Oct 10 22:10 HITS.pool.root.1
[2025-10-10 22:11:53] -rw-------. 1 boincer umatlas   2088960 Oct 10 22:11 result.tar.gz
22:11:54 (1322639): run_atlas exited; CPU time 49519.360287
22:11:54 (1322639): called boinc_finish(0)

</stderr_txt>
]]>

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