Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:58:14 (3468): wrapper (7.7.26015): starting
15:58:14 (3468): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 15:58:14] Arguments: --nthreads 12
[2025-10-10 15:58:14] Threads: 12
[2025-10-10 15:58:14] Checking for CVMFS
[2025-10-10 15:58:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 15:58:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 15:58:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 15:58:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 15:58:14] 2.11.2.0 2981 220406 96956 151559 2 57 12318021 20275201 1 130560 1 106856686 99.984 13386134 12440 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 15:58:14] CVMFS is ok
[2025-10-10 15:58:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 15:58:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 15:58:14] Further information can be found at the LHC@home message board.
[2025-10-10 15:58:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 15:58:14] Checking for apptainer binary...
[2025-10-10 15:58:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 15:58:14] Running /usr/bin/apptainer --version
[2025-10-10 15:58:14] apptainer version 1.3.2-1.el7
[2025-10-10 15:58:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 15:58:16] c-205-30.aglt2.org
[2025-10-10 15:58:16] apptainer works
[2025-10-10 15:58:16] Set ATHENA_PROC_NUMBER=12
[2025-10-10 15:58:16] Set ATHENA_CORE_NUMBER=12
[2025-10-10 15:58:16] Starting ATLAS job with PandaID=6837512291
[2025-10-10 15:58:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 17:09:44]  *** The last 200 lines of the pilot log: ***
[2025-10-10 17:09:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-10 17:09:44]  replicas=None
[2025-10-10 17:09:44]  scope=mc23_13p6TeV
[2025-10-10 17:09:44]  status=None
[2025-10-10 17:09:44]  status_code=0
[2025-10-10 17:09:44]  storage_token=
[2025-10-10 17:09:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6837512291/log.46676269._035569.job.log.tgz.1
[2025-10-10 17:09:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/60/log.46676269._035569.job.log.tgz.1
[2025-10-10 17:09:44]  workdir=None
[2025-10-10 17:09:44] ]
[2025-10-10 17:09:44] 2025-10-10 21:08:34,975 | INFO     | transferring file log.46676269._035569.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6837512291/log.46676269._035569.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-10 17:09:44] 2025-10-10 21:08:34,975 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6837512291/log.46676269._035569.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._035569.job
[2025-10-10 17:09:44] 2025-10-10 21:08:34,996 | INFO     | adding to output.list: log.46676269._035569.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/60/log.46676269._035569.job.log.tg
[2025-10-10 17:09:44] 2025-10-10 21:08:34,997 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-10 17:09:44] 2025-10-10 21:08:34,997 | INFO     | summary of transferred files:
[2025-10-10 17:09:44] 2025-10-10 21:08:34,997 | INFO     |  -- lfn=log.46676269._035569.job.log.tgz.1, status_code=0, status=transferred
[2025-10-10 17:09:44] 2025-10-10 21:08:34,997 | INFO     | stage-out finished correctly
[2025-10-10 17:09:44] 2025-10-10 21:08:36,884 | INFO     | time since job start (4205s) is within the limit (172800.0s)
[2025-10-10 17:09:44] 2025-10-10 21:08:37,236 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-10 17:09:44] 2025-10-10 21:08:37,720 | INFO     | job 6837512291 has state=finished
[2025-10-10 17:09:44] 2025-10-10 21:08:37,721 | INFO     | preparing for final server update for job 6837512291 in state='finished'
[2025-10-10 17:09:44] 2025-10-10 21:08:37,721 | INFO     | this job has now completed (state=finished)
[2025-10-10 17:09:44] 2025-10-10 21:08:37,721 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-10 17:09:44] 2025-10-10 21:08:37,721 | INFO     | log transfer has been attempted: DONE
[2025-10-10 17:09:44] 2025-10-10 21:08:37,722 | INFO     | job 6837512291 has finished - writing final server update
[2025-10-10 17:09:44] 2025-10-10 21:08:37,722 | INFO     | total number of processed events: 400 (read)
[2025-10-10 17:09:44] 2025-10-10 21:08:37,723 | INFO     | executing command: lscpu
[2025-10-10 17:09:44] 2025-10-10 21:08:37,747 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-10 17:09:44] 2025-10-10 21:08:38,890 | INFO     | time since job start (4207s) is within the limit (172800.0s)
[2025-10-10 17:09:44] 2025-10-10 21:08:39,680 | WARNING  | process 15231 can no longer be monitored (due to stat problems) - aborting
[2025-10-10 17:09:44] 2025-10-10 21:08:39,680 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837512291/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 17:09:44] 2025-10-10 21:08:39,768 | INFO     | number of running child processes to parent process 15231: 1
[2025-10-10 17:09:44] 2025-10-10 21:08:39,769 | INFO     | maximum number of monitored processes: 6
[2025-10-10 17:09:44] 2025-10-10 21:08:40,896 | INFO     | time since job start (4209s) is within the limit (172800.0s)
[2025-10-10 17:09:44] 2025-10-10 21:08:42,271 | INFO     | monitor loop #314: job 0:6837512291 is in state 'finished'
[2025-10-10 17:09:44] 2025-10-10 21:08:42,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-10 17:09:44] 2025-10-10 21:08:42,385 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-10 17:09:44] 2025-10-10 21:08:42,389 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-10 17:09:44] 2025-10-10 21:08:42,391 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837512291/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 17:09:44] 2025-10-10 21:08:42,392 | INFO     | extracted standard info from prmon json
[2025-10-10 17:09:44] 2025-10-10 21:08:42,392 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 17:09:44] 2025-10-10 21:08:42,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 17:09:44] 2025-10-10 21:08:42,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 17:09:44] 2025-10-10 21:08:42,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 17:09:44] 2025-10-10 21:08:42,395 | INFO     | fitting pss+swap vs Time
[2025-10-10 17:09:44] 2025-10-10 21:08:42,395 | INFO     | sum of square deviations: 73882315.5
[2025-10-10 17:09:44] 2025-10-10 21:08:42,395 | INFO     | sum of deviations: -3319669410.0
[2025-10-10 17:09:44] 2025-10-10 21:08:42,395 | INFO     | mean x: 1760128505.5
[2025-10-10 17:09:44] 2025-10-10 21:08:42,396 | INFO     | mean y: 2718071.9032258065
[2025-10-10 17:09:44] 2025-10-10 21:08:42,396 | INFO     | -- intersect: 79088555025.36696
[2025-10-10 17:09:44] 2025-10-10 21:08:42,396 | INFO     | intersect: 79088555025.36696
[2025-10-10 17:09:44] 2025-10-10 21:08:42,396 | INFO     | chi2: 0.04150572191381871
[2025-10-10 17:09:44] 2025-10-10 21:08:42,396 | INFO     | -- intersect: 79088555025.36696
[2025-10-10 17:09:44] 2025-10-10 21:08:42,397 | INFO     | current memory leak: -44.93 B/s (using 62 data points, chi2=0.04)
[2025-10-10 17:09:44] 2025-10-10 21:08:42,397 | INFO     | could have reported an average CPU frequency of 2048 MHz (6 samples)
[2025-10-10 17:09:44] 2025-10-10 21:08:42,397 | INFO     | ..............................
[2025-10-10 17:09:44] 2025-10-10 21:08:42,397 | INFO     | . Timing measurements:
[2025-10-10 17:09:44] 2025-10-10 21:08:42,397 | INFO     | . get job = 0 s
[2025-10-10 17:09:44] 2025-10-10 21:08:42,397 | INFO     | . initial setup = 2 s
[2025-10-10 17:09:44] 2025-10-10 21:08:42,398 | INFO     | . payload setup = 6 s
[2025-10-10 17:09:44] 2025-10-10 21:08:42,398 | INFO     | . stage-in = 0 s
[2025-10-10 17:09:44] 2025-10-10 21:08:42,398 | INFO     | . payload execution = 4176 s
[2025-10-10 17:09:44] 2025-10-10 21:08:42,398 | INFO     | . stage-out = 0 s
[2025-10-10 17:09:44] 2025-10-10 21:08:42,398 | INFO     | . log creation = 0 s
[2025-10-10 17:09:44] 2025-10-10 21:08:42,398 | INFO     | ..............................
[2025-10-10 17:09:44] 2025-10-10 21:08:42,483 | INFO     | 
[2025-10-10 17:09:44] 2025-10-10 21:08:42,483 | INFO     | job summary report
[2025-10-10 17:09:44] 2025-10-10 21:08:42,483 | INFO     | --------------------------------------------------
[2025-10-10 17:09:44] 2025-10-10 21:08:42,483 | INFO     | PanDA job id: 6837512291
[2025-10-10 17:09:44] 2025-10-10 21:08:42,483 | INFO     | task id: 46676269
[2025-10-10 17:09:44] 2025-10-10 21:08:42,483 | INFO     | errors: (none)
[2025-10-10 17:09:44] 2025-10-10 21:08:42,484 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 17:09:44] 2025-10-10 21:08:42,484 | INFO     | pilot state: finished 
[2025-10-10 17:09:44] 2025-10-10 21:08:42,484 | INFO     | transexitcode: 0
[2025-10-10 17:09:44] 2025-10-10 21:08:42,484 | INFO     | exeerrorcode: 0
[2025-10-10 17:09:44] 2025-10-10 21:08:42,484 | INFO     | exeerrordiag: 
[2025-10-10 17:09:44] 2025-10-10 21:08:42,484 | INFO     | exitcode: 0
[2025-10-10 17:09:44] 2025-10-10 21:08:42,485 | INFO     | exitmsg: OK
[2025-10-10 17:09:44] 2025-10-10 21:08:42,485 | INFO     | cpuconsumptiontime: 45595 s
[2025-10-10 17:09:44] 2025-10-10 21:08:42,485 | INFO     | nevents: 400
[2025-10-10 17:09:44] 2025-10-10 21:08:42,485 | INFO     | neventsw: 0
[2025-10-10 17:09:44] 2025-10-10 21:08:42,485 | INFO     | pid: 15231
[2025-10-10 17:09:44] 2025-10-10 21:08:42,485 | INFO     | pgrp: 15231
[2025-10-10 17:09:44] 2025-10-10 21:08:42,486 | INFO     | corecount: 12
[2025-10-10 17:09:44] 2025-10-10 21:08:42,486 | INFO     | event service: False
[2025-10-10 17:09:44] 2025-10-10 21:08:42,486 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4186: 2375100, 4187: 2384098, 4189: 2384154, 4195: 2384476}
[2025-10-10 17:09:44] 2025-10-10 21:08:42,486 | INFO     | --------------------------------------------------
[2025-10-10 17:09:44] 2025-10-10 21:08:42,486 | INFO     | 
[2025-10-10 17:09:44] 2025-10-10 21:08:42,486 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-10 17:09:44] 2025-10-10 21:08:42,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,511 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,511 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,512 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,513 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 17:09:44] 2025-10-10 21:08:42,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,514 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 17:09:44] 2025-10-10 21:08:42,514 | INFO     | job 6837512291 has completed (purged errors)
[2025-10-10 17:09:44] 2025-10-10 21:08:42,514 | INFO     | overall cleanup function is called
[2025-10-10 17:09:44] 2025-10-10 21:08:43,522 | INFO     | --- collectZombieJob: --- 10, [15231]
[2025-10-10 17:09:44] 2025-10-10 21:08:43,522 | INFO     | zombie collector waiting for pid 15231
[2025-10-10 17:09:44] 2025-10-10 21:08:43,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 17:09:44] 2025-10-10 21:08:43,523 | INFO     | collected zombie processes
[2025-10-10 17:09:44] 2025-10-10 21:08:43,523 | INFO     | will attempt to kill all subprocesses of pid=15231
[2025-10-10 17:09:44] 2025-10-10 21:08:43,621 | INFO     | process IDs to be killed: [15231] (in reverse order)
[2025-10-10 17:09:44] 2025-10-10 21:08:43,674 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 17:09:44] 2025-10-10 21:08:43,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 17:09:44] 2025-10-10 21:08:43,678 | INFO     | did not find any defunct processes belonging to 15231
[2025-10-10 17:09:44] 2025-10-10 21:08:43,681 | INFO     | did not find any defunct processes belonging to 15231
[2025-10-10 17:09:44] 2025-10-10 21:08:43,681 | INFO     | ready for new job
[2025-10-10 17:09:44] 2025-10-10 21:08:43,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 17:09:44] 2025-10-10 21:08:43,682 | INFO     | ***************************************
[2025-10-10 17:09:44] 2025-10-10 21:08:43,682 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 17:09:44] 2025-10-10 21:08:43,683 | INFO     | ***************************************
[2025-10-10 17:09:44] 2025-10-10 21:08:43,683 | INFO     | 
[2025-10-10 17:09:44] 2025-10-10 21:08:43,683 | INFO     | architecture information:
[2025-10-10 17:09:44] 2025-10-10 21:08:43,684 | INFO     | executing command: cat /etc/os-release
[2025-10-10 17:09:44] 2025-10-10 21:08:43,698 | INFO     | cat /etc/os-release:
[2025-10-10 17:09:44] NAME="CentOS Linux"
[2025-10-10 17:09:44] VERSION="7 (Core)"
[2025-10-10 17:09:44] ID="centos"
[2025-10-10 17:09:44] ID_LIKE="rhel fedora"
[2025-10-10 17:09:44] VERSION_ID="7"
[2025-10-10 17:09:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 17:09:44] ANSI_COLOR="0;31"
[2025-10-10 17:09:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 17:09:44] HOME_URL="https://www.centos.org/"
[2025-10-10 17:09:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 17:09:44] 
[2025-10-10 17:09:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 17:09:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 17:09:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 17:09:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 17:09:44] 
[2025-10-10 17:09:44] 2025-10-10 21:08:43,698 | INFO     | ***************************************
[2025-10-10 17:09:44] 2025-10-10 21:08:44,201 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-10 17:09:44] 2025-10-10 21:08:44,218 | INFO     | sufficient remaining disk space (29371662336 B)
[2025-10-10 17:09:44] 2025-10-10 21:08:44,218 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 17:09:44] 2025-10-10 21:08:44,219 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 17:09:44] 2025-10-10 21:08:44,219 | INFO     | update_server=False
[2025-10-10 17:09:44] 2025-10-10 21:08:44,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 17:09:44] 2025-10-10 21:08:44,219 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 17:09:44] 2025-10-10 21:08:44,219 | INFO     | aborting loop
[2025-10-10 17:09:44] 2025-10-10 21:08:44,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 17:09:44] 2025-10-10 21:08:44,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 17:09:44] 2025-10-10 21:08:44,707 | INFO     | all data control threads have been joined
[2025-10-10 17:09:44] 2025-10-10 21:08:45,023 | INFO     | all job control threads have been joined
[2025-10-10 17:09:44] 2025-10-10 21:08:45,225 | INFO     | [job] retrieve thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:45,225 | INFO     | [job] job monitor thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:45,226 | INFO     | [job] queue monitor thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:45,346 | INFO     | [payload] failed_post thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:45,464 | INFO     | all payload control threads have been joined
[2025-10-10 17:09:44] 2025-10-10 21:08:45,517 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:45,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 17:09:44] 2025-10-10 21:08:45,713 | INFO     | [data] control thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:45,831 | INFO     | [job] validate thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:46,029 | INFO     | [job] control thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:46,434 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:46,446 | INFO     | [data] copytool_in thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:46,452 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:46,469 | INFO     | [payload] control thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:46,470 | INFO     | [payload] validate_post thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:47,600 | INFO     | [data] copytool_out thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:48,226 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:08:54,332 | INFO     | job.realtimelogging is not enabled
[2025-10-10 17:09:44] 2025-10-10 21:08:55,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 17:09:44] 2025-10-10 21:09:14,094 | INFO     | PID=7144 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-10 17:09:44] 2025-10-10 21:09:14,094 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 17:09:44] 2025-10-10 21:09:14,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 17:09:44] 2025-10-10 21:09:14,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 17:09:44] 2025-10-10 21:09:37,795 | INFO     | [monitor] cgroup control has ended
[2025-10-10 17:09:44] 2025-10-10 21:09:38,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356642867008)>', '<ExcThread(monitor, started 140355907352320)>']
[2025-10-10 17:09:44] 2025-10-10 21:09:39,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 17:09:44] 2025-10-10 21:09:39,219 | INFO     | [monitor] control thread has ended
[2025-10-10 17:09:44] 2025-10-10 21:09:44,014 | INFO     | all workflow threads have been joined
[2025-10-10 17:09:44] 2025-10-10 21:09:44,014 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 17:09:44] 2025-10-10 21:09:44,015 | INFO     | traces error code: 0
[2025-10-10 17:09:44] 2025-10-10 21:09:44,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 17:09:44] 2025-10-10 21:09:44,111 [wrapper] ==== pilot stdout END ====
[2025-10-10 17:09:44] 2025-10-10 21:09:44,115 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 17:09:44] 2025-10-10 21:09:44,119 [wrapper] pilotpid: 7144
[2025-10-10 17:09:44] 2025-10-10 21:09:44,124 [wrapper] Pilot exit status: 0
[2025-10-10 17:09:44] 2025-10-10 21:09:44,139 [wrapper] pandaids: 6837512291
[2025-10-10 17:09:44] 2025-10-10 21:09:44,184 [wrapper] cleanup supervisor_pilot 26983 7145
[2025-10-10 17:09:44] 2025-10-10 21:09:44,188 [wrapper] Test setup, not cleaning
[2025-10-10 17:09:44] 2025-10-10 21:09:44,192 [wrapper] apfmon messages muted
[2025-10-10 17:09:44] 2025-10-10 21:09:44,196 [wrapper] ==== wrapper stdout END ====
[2025-10-10 17:09:44] 2025-10-10 21:09:44,199 [wrapper] ==== wrapper stderr END ====
[2025-10-10 17:09:44]  *** Error codes and diagnostics ***
[2025-10-10 17:09:44]     "exeErrorCode": 0,
[2025-10-10 17:09:44]     "exeErrorDiag": "",
[2025-10-10 17:09:44]     "pilotErrorCode": 0,
[2025-10-10 17:09:44]     "pilotErrorDiag": "",
[2025-10-10 17:09:44]  *** Listing of results directory ***
[2025-10-10 17:09:44] total 408456
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 04:34 pilot3.tar.gz
[2025-10-10 17:09:44] -rwx------ 1 boincer umatlas     36292 Oct 10 04:49 runpilot2-wrapper.sh
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 04:49 queuedata.json
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas       100 Oct 10 15:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 17:09:44] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 15:58 run_atlas
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas       105 Oct 10 15:58 job.xml
[2025-10-10 17:09:44] -rw-r--r-- 2 boincer umatlas 218472069 Oct 10 15:58 EVNT.46676267._001446.pool.root.1
[2025-10-10 17:09:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 15:58 start_atlas.sh
[2025-10-10 17:09:44] drwxrwx--x 2 boincer umatlas      4096 Oct 10 15:58 shared
[2025-10-10 17:09:44] -rw-r--r-- 2 boincer umatlas    569675 Oct 10 15:58 input.tar.gz
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas         0 Oct 10 15:58 boinc_lockfile
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas      2550 Oct 10 15:58 pandaJob.out
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas    975541 Oct 10 15:58 agis_schedconf.cvmfs.json
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas   1560580 Oct 10 15:58 agis_ddmendpoints.agis.ALL.json
[2025-10-10 17:09:44] drwx------ 5 boincer umatlas      4096 Oct 10 15:58 pilot3
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas      5953 Oct 10 17:04 init_data.xml
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas 193896278 Oct 10 17:08 HITS.46676269._035569.pool.root.1
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas       529 Oct 10 17:08 boinc_task_state.xml
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas        95 Oct 10 17:08 pilot_heartbeat.json
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas      1049 Oct 10 17:08 memory_monitor_summary.json
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas    380880 Oct 10 17:08 log.46676269._035569.job.log.tgz.1
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas      7857 Oct 10 17:08 heartbeat.json
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas      8192 Oct 10 17:09 boinc_mmap_file
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas        27 Oct 10 17:09 wrapper_checkpoint.txt
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas      4817 Oct 10 17:09 pilotlog.txt
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas    614850 Oct 10 17:09 log.46676269._035569.job.log.1
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas       357 Oct 10 17:09 output.list
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas       620 Oct 10 17:09 runtime_log
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas   1013760 Oct 10 17:09 result.tar.gz
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas      8705 Oct 10 17:09 runtime_log.err
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas       659 Oct 10 17:09 G8cNDmczNR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWePMDmDRS7rn.diag
[2025-10-10 17:09:44] -rw-r--r-- 1 boincer umatlas     21832 Oct 10 17:09 stderr.txt
[2025-10-10 17:09:44] HITS file was successfully produced:
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas 193896278 Oct 10 17:08 shared/HITS.pool.root.1
[2025-10-10 17:09:44]  *** Contents of shared directory: ***
[2025-10-10 17:09:44] total 404276
[2025-10-10 17:09:44] -rw-r--r-- 2 boincer umatlas 218472069 Oct 10 15:58 ATLAS.root_0
[2025-10-10 17:09:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 15:58 start_atlas.sh
[2025-10-10 17:09:44] -rw-r--r-- 2 boincer umatlas    569675 Oct 10 15:58 input.tar.gz
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas 193896278 Oct 10 17:08 HITS.pool.root.1
[2025-10-10 17:09:44] -rw------- 1 boincer umatlas   1013760 Oct 10 17:09 result.tar.gz
17:09:46 (3468): run_atlas exited; CPU time 45568.821626
17:09:46 (3468): called boinc_finish(0)

</stderr_txt>
]]>

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