Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:51:18 (761671): wrapper (7.7.26015): starting
15:51:18 (761671): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 15:51:18] Arguments: --nthreads 8
[2025-10-10 15:51:18] Threads: 8
[2025-10-10 15:51:18] Checking for CVMFS
[2025-10-10 15:51:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 15:51:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 15:51:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 15:51:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 15:51:20] 2.13.2.0 3836034 135764 905732 151559 1 667 39529163 40960000 59723 16776704 213 372847589 99.779 217645700 18939 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 15:51:20] CVMFS is ok
[2025-10-10 15:51:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 15:51:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 15:51:20] Further information can be found at the LHC@home message board.
[2025-10-10 15:51:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 15:51:20] Checking for apptainer binary...
[2025-10-10 15:51:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 15:51:20] Running /usr/bin/apptainer --version
[2025-10-10 15:51:20] apptainer version 1.4.3-1.el9
[2025-10-10 15:51:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 15:51:21] lc-12-9.aglt2.org
[2025-10-10 15:51:21] apptainer works
[2025-10-10 15:51:21] Set ATHENA_PROC_NUMBER=8
[2025-10-10 15:51:21] Set ATHENA_CORE_NUMBER=8
[2025-10-10 15:51:21] Starting ATLAS job with PandaID=6837512296
[2025-10-10 15:51:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 20:28:02]  *** The last 200 lines of the pilot log: ***
[2025-10-10 20:28:02] 2025-10-11 00:27:16,699 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 20:28:02] 2025-10-11 00:27:16,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 20:28:02] 2025-10-11 00:27:16,709 | INFO     | fitting pss+swap vs Time
[2025-10-10 20:28:02] 2025-10-11 00:27:16,710 | INFO     | sum of square deviations: 5902383010.029986
[2025-10-10 20:28:02] 2025-10-11 00:27:16,716 | INFO     | sum of deviations: 92987081328.74904
[2025-10-10 20:28:02] 2025-10-11 00:27:16,717 | INFO     | mean x: 1760134228.2996254
[2025-10-10 20:28:02] 2025-10-11 00:27:16,717 | INFO     | mean y: 2071857.490636704
[2025-10-10 20:28:02] 2025-10-11 00:27:16,717 | INFO     | -- intersect: -27727362907.80439
[2025-10-10 20:28:02] 2025-10-11 00:27:16,717 | INFO     | intersect: -27727362907.80439
[2025-10-10 20:28:02] 2025-10-11 00:27:16,717 | INFO     | chi2: 4.4568188942497455
[2025-10-10 20:28:02] 2025-10-11 00:27:16,718 | INFO     | sum of square deviations: 5576948036.87022
[2025-10-10 20:28:02] 2025-10-11 00:27:16,720 | INFO     | sum of deviations: 105458016288.34349
[2025-10-10 20:28:02] 2025-10-11 00:27:16,720 | INFO     | mean x: 1760134075.793893
[2025-10-10 20:28:02] 2025-10-11 00:27:16,720 | INFO     | mean y: 2077585.3396946564
[2025-10-10 20:28:02] 2025-10-11 00:27:16,720 | INFO     | -- intersect: -33281404133.97551
[2025-10-10 20:28:02] 2025-10-11 00:27:16,720 | INFO     | intersect: -33281404133.97551
[2025-10-10 20:28:02] 2025-10-11 00:27:16,720 | INFO     | chi2: 3.62103516344402
[2025-10-10 20:28:02] 2025-10-11 00:27:16,721 | INFO     | current chi2=3.62103516344402 (change=18.752921099936685 %)
[2025-10-10 20:28:02] 2025-10-11 00:27:16,721 | INFO     | right removable region: 261
[2025-10-10 20:28:02] 2025-10-11 00:27:16,721 | INFO     | sum of square deviations: 5576964021.679373
[2025-10-10 20:28:02] 2025-10-11 00:27:16,733 | INFO     | sum of deviations: 30155983721.312965
[2025-10-10 20:28:02] 2025-10-11 00:27:16,733 | INFO     | mean x: 1760134380.8015268
[2025-10-10 20:28:02] 2025-10-11 00:27:16,733 | INFO     | mean y: 2101232.217557252
[2025-10-10 20:28:02] 2025-10-11 00:27:16,733 | INFO     | -- intersect: -9515368044.693922
[2025-10-10 20:28:02] 2025-10-11 00:27:16,734 | INFO     | intersect: -9515368044.693922
[2025-10-10 20:28:02] 2025-10-11 00:27:16,734 | INFO     | chi2: 1.4503207554755242
[2025-10-10 20:28:02] 2025-10-11 00:27:16,734 | INFO     | current chi2=1.4503207554755242 (change=67.4583870269723 %)
[2025-10-10 20:28:02] 2025-10-11 00:27:16,735 | INFO     | sum of square deviations: 5263715448.715951
[2025-10-10 20:28:02] 2025-10-11 00:27:16,750 | INFO     | sum of deviations: 4779898835.747089
[2025-10-10 20:28:02] 2025-10-11 00:27:16,751 | INFO     | mean x: 1760134533.307393
[2025-10-10 20:28:02] 2025-10-11 00:27:16,751 | INFO     | mean y: 2113569.712062257
[2025-10-10 20:28:02] 2025-10-11 00:27:16,751 | INFO     | -- intersect: -1596237459.8001077
[2025-10-10 20:28:02] 2025-10-11 00:27:16,751 | INFO     | intersect: -1596237459.8001077
[2025-10-10 20:28:02] 2025-10-11 00:27:16,751 | INFO     | chi2: 1.0108321740958104
[2025-10-10 20:28:02] 2025-10-11 00:27:16,751 | INFO     | current chi2=1.0108321740958104 (change=30.302854021806812 %)
[2025-10-10 20:28:02] 2025-10-11 00:27:16,752 | INFO     | sum of square deviations: 4962436264.857132
[2025-10-10 20:28:02] 2025-10-11 00:27:16,753 | INFO     | sum of deviations: 1687535360.8095303
[2025-10-10 20:28:02] 2025-10-11 00:27:16,753 | INFO     | mean x: 1760134685.8095238
[2025-10-10 20:28:02] 2025-10-11 00:27:16,753 | INFO     | mean y: 2115108.246031746
[2025-10-10 20:28:02] 2025-10-11 00:27:16,754 | INFO     | -- intersect: -596439586.1741008
[2025-10-10 20:28:02] 2025-10-11 00:27:16,754 | INFO     | intersect: -596439586.1741008
[2025-10-10 20:28:02] 2025-10-11 00:27:16,754 | INFO     | chi2: 0.9871535749742169
[2025-10-10 20:28:02] 2025-10-11 00:27:16,754 | INFO     | current chi2=0.9871535749742169 (change=2.3424856992481513 %)
[2025-10-10 20:28:02] 2025-10-11 00:27:16,754 | INFO     | left removable region: 30
[2025-10-10 20:28:02] 2025-10-11 00:27:16,755 | INFO     | sum of square deviations: 3822360714.3896046
[2025-10-10 20:28:02] 2025-10-11 00:27:16,766 | INFO     | sum of deviations: 16175984241.88312
[2025-10-10 20:28:02] 2025-10-11 00:27:16,766 | INFO     | mean x: 1760134960.2987013
[2025-10-10 20:28:02] 2025-10-11 00:27:16,766 | INFO     | mean y: 2121592.2770562773
[2025-10-10 20:28:02] 2025-10-11 00:27:16,767 | INFO     | -- intersect: -7446656141.910718
[2025-10-10 20:28:02] 2025-10-11 00:27:16,767 | INFO     | intersect: -7446656141.910718
[2025-10-10 20:28:02] 2025-10-11 00:27:16,767 | INFO     | chi2: 0.08842201168625087
[2025-10-10 20:28:02] 2025-10-11 00:27:16,767 | INFO     | -- intersect: -7446656141.910718
[2025-10-10 20:28:02] 2025-10-11 00:27:16,767 | INFO     | current memory leak: 4.23 B/s (using 231 data points, chi2=0.09)
[2025-10-10 20:28:02] 2025-10-11 00:27:16,768 | INFO     | could have reported an average CPU frequency of 2743 MHz (12 samples)
[2025-10-10 20:28:02] 2025-10-11 00:27:16,768 | INFO     | ..............................
[2025-10-10 20:28:02] 2025-10-11 00:27:16,768 | INFO     | . Timing measurements:
[2025-10-10 20:28:02] 2025-10-11 00:27:16,768 | INFO     | . get job = 0 s
[2025-10-10 20:28:02] 2025-10-11 00:27:16,768 | INFO     | . initial setup = 6 s
[2025-10-10 20:28:02] 2025-10-11 00:27:16,768 | INFO     | . payload setup = 47 s
[2025-10-10 20:28:02] 2025-10-11 00:27:16,768 | INFO     | . stage-in = 0 s
[2025-10-10 20:28:02] 2025-10-11 00:27:16,768 | INFO     | . payload execution = 16311 s
[2025-10-10 20:28:02] 2025-10-11 00:27:16,769 | INFO     | . stage-out = 4 s
[2025-10-10 20:28:02] 2025-10-11 00:27:16,769 | INFO     | . log creation = 0 s
[2025-10-10 20:28:02] 2025-10-11 00:27:16,769 | INFO     | ..............................
[2025-10-10 20:28:02] 2025-10-11 00:27:16,984 | INFO     | time since job start (16491s) is within the limit (172800.0s)
[2025-10-10 20:28:02] 2025-10-11 00:27:17,224 | INFO     | 
[2025-10-10 20:28:02] 2025-10-11 00:27:17,224 | INFO     | job summary report
[2025-10-10 20:28:02] 2025-10-11 00:27:17,224 | INFO     | --------------------------------------------------
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | PanDA job id: 6837512296
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | task id: 46676269
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | errors: (none)
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | pilot state: finished 
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | transexitcode: 0
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | exeerrorcode: 0
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | exeerrordiag: 
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | exitcode: 0
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | exitmsg: OK
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | cpuconsumptiontime: 44038 s
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | nevents: 400
[2025-10-10 20:28:02] 2025-10-11 00:27:17,225 | INFO     | neventsw: 0
[2025-10-10 20:28:02] 2025-10-11 00:27:17,226 | INFO     | pid: 796760
[2025-10-10 20:28:02] 2025-10-11 00:27:17,226 | INFO     | pgrp: 796760
[2025-10-10 20:28:02] 2025-10-11 00:27:17,226 | INFO     | corecount: 8
[2025-10-10 20:28:02] 2025-10-11 00:27:17,226 | INFO     | event service: False
[2025-10-10 20:28:02] 2025-10-11 00:27:17,226 | INFO     | sizes: {0: 2348029, 2: 2348714, 3: 2348742, 4: 2348913, 5: 2348941, 6: 2348997, 17: 2349153, 29: 2349181, 39: 2349209, 44: 2349499, 51: 2349527, 16363: 2381041, 16
[2025-10-10 20:28:02] 2025-10-11 00:27:17,226 | INFO     | --------------------------------------------------
[2025-10-10 20:28:02] 2025-10-11 00:27:17,226 | INFO     | 
[2025-10-10 20:28:02] 2025-10-11 00:27:17,226 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-10 20:28:02] 2025-10-11 00:27:17,319 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,321 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 20:28:02] 2025-10-11 00:27:17,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,321 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 20:28:02] 2025-10-11 00:27:17,321 | INFO     | job 6837512296 has completed (purged errors)
[2025-10-10 20:28:02] 2025-10-11 00:27:17,322 | INFO     | overall cleanup function is called
[2025-10-10 20:28:02] 2025-10-11 00:27:18,330 | INFO     | --- collectZombieJob: --- 10, [796760]
[2025-10-10 20:28:02] 2025-10-11 00:27:18,330 | INFO     | zombie collector waiting for pid 796760
[2025-10-10 20:28:02] 2025-10-11 00:27:18,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 20:28:02] 2025-10-11 00:27:18,331 | INFO     | collected zombie processes
[2025-10-10 20:28:02] 2025-10-11 00:27:18,331 | INFO     | will attempt to kill all subprocesses of pid=796760
[2025-10-10 20:28:02] 2025-10-11 00:27:19,785 | INFO     | process IDs to be killed: [796760] (in reverse order)
[2025-10-10 20:28:02] 2025-10-11 00:27:20,634 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 20:28:02] 2025-10-11 00:27:20,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 20:28:02] 2025-10-11 00:27:20,688 | INFO     | did not find any defunct processes belonging to 796760
[2025-10-10 20:28:02] 2025-10-11 00:27:20,814 | INFO     | did not find any defunct processes belonging to 796760
[2025-10-10 20:28:02] 2025-10-11 00:27:20,814 | INFO     | ready for new job
[2025-10-10 20:28:02] 2025-10-11 00:27:20,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 20:28:02] 2025-10-11 00:27:20,816 | INFO     | ***************************************
[2025-10-10 20:28:02] 2025-10-11 00:27:20,817 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 20:28:02] 2025-10-11 00:27:20,817 | INFO     | ***************************************
[2025-10-10 20:28:02] 2025-10-11 00:27:20,817 | INFO     | 
[2025-10-10 20:28:02] 2025-10-11 00:27:20,839 | INFO     | architecture information:
[2025-10-10 20:28:02] 2025-10-11 00:27:20,842 | INFO     | executing command: cat /etc/os-release
[2025-10-10 20:28:02] 2025-10-11 00:27:20,887 | INFO     | cat /etc/os-release:
[2025-10-10 20:28:02] NAME="CentOS Linux"
[2025-10-10 20:28:02] VERSION="7 (Core)"
[2025-10-10 20:28:02] ID="centos"
[2025-10-10 20:28:02] ID_LIKE="rhel fedora"
[2025-10-10 20:28:02] VERSION_ID="7"
[2025-10-10 20:28:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 20:28:02] ANSI_COLOR="0;31"
[2025-10-10 20:28:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 20:28:02] HOME_URL="https://www.centos.org/"
[2025-10-10 20:28:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 20:28:02] 
[2025-10-10 20:28:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 20:28:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 20:28:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 20:28:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 20:28:02] 
[2025-10-10 20:28:02] 2025-10-11 00:27:20,888 | INFO     | ***************************************
[2025-10-10 20:28:02] 2025-10-11 00:27:21,404 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-10 20:28:02] 2025-10-11 00:27:21,457 | INFO     | sufficient remaining disk space (420426547200 B)
[2025-10-10 20:28:02] 2025-10-11 00:27:21,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 20:28:02] 2025-10-11 00:27:21,458 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 20:28:02] 2025-10-11 00:27:21,458 | INFO     | update_server=False
[2025-10-10 20:28:02] 2025-10-11 00:27:21,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 20:28:02] 2025-10-11 00:27:21,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 20:28:02] 2025-10-11 00:27:21,459 | INFO     | aborting loop
[2025-10-10 20:28:02] 2025-10-11 00:27:21,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 20:28:02] 2025-10-11 00:27:21,836 | INFO     | all data control threads have been joined
[2025-10-10 20:28:02] 2025-10-11 00:27:22,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 20:28:02] 2025-10-11 00:27:22,442 | INFO     | all job control threads have been joined
[2025-10-10 20:28:02] 2025-10-11 00:27:22,464 | INFO     | [job] retrieve thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:22,467 | INFO     | [job] job monitor thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:22,844 | INFO     | [data] control thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:22,952 | INFO     | all payload control threads have been joined
[2025-10-10 20:28:02] 2025-10-11 00:27:23,247 | INFO     | [job] queue monitor thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,304 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,399 | INFO     | [data] copytool_in thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,448 | INFO     | [job] control thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,470 | INFO     | [job] validate thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,471 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,539 | INFO     | [payload] failed_post thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,578 | INFO     | [payload] validate_post thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,655 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,755 | INFO     | [data] copytool_out thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,858 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:23,958 | INFO     | [payload] control thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:24,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 20:28:02] 2025-10-11 00:27:28,429 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 20:28:02] 2025-10-11 00:27:53,807 | INFO     | PID=774511 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-10 20:28:02] 2025-10-11 00:27:53,807 | INFO     | .. there are 89 such processes running
[2025-10-10 20:28:02] 2025-10-11 00:27:53,819 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 20:28:02] 2025-10-11 00:27:53,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 20:28:02] 2025-10-11 00:27:53,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 20:28:02] 2025-10-11 00:27:54,374 | INFO     | [monitor] cgroup control has ended
[2025-10-10 20:28:02] 2025-10-11 00:27:54,922 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324815431488)>', '<ExcThread(monitor, started 140324450047744)>']
[2025-10-10 20:28:02] 2025-10-11 00:27:55,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 20:28:02] 2025-10-11 00:27:55,834 | INFO     | [monitor] control thread has ended
[2025-10-10 20:28:02] 2025-10-11 00:27:59,948 | INFO     | all workflow threads have been joined
[2025-10-10 20:28:02] 2025-10-11 00:27:59,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 20:28:02] 2025-10-11 00:27:59,949 | INFO     | traces error code: 0
[2025-10-10 20:28:02] 2025-10-11 00:27:59,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 20:28:02] 2025-10-11 00:28:00,403 [wrapper] ==== pilot stdout END ====
[2025-10-10 20:28:02] 2025-10-11 00:28:00,417 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 20:28:02] 2025-10-11 00:28:00,432 [wrapper] pilotpid: 774511
[2025-10-10 20:28:02] 2025-10-11 00:28:00,458 [wrapper] Pilot exit status: 0
[2025-10-10 20:28:02] 2025-10-11 00:28:00,537 [wrapper] pandaids: 6837512296
[2025-10-10 20:28:02] 2025-10-11 00:28:01,314 [wrapper] cleanup supervisor_pilot 2651432 774512
[2025-10-10 20:28:02] 2025-10-11 00:28:01,364 [wrapper] Test setup, not cleaning
[2025-10-10 20:28:02] 2025-10-11 00:28:01,380 [wrapper] apfmon messages muted
[2025-10-10 20:28:02] 2025-10-11 00:28:01,388 [wrapper] ==== wrapper stdout END ====
[2025-10-10 20:28:02] 2025-10-11 00:28:01,399 [wrapper] ==== wrapper stderr END ====
[2025-10-10 20:28:02]  *** Error codes and diagnostics ***
[2025-10-10 20:28:02]     "exeErrorCode": 0,
[2025-10-10 20:28:02]     "exeErrorDiag": "",
[2025-10-10 20:28:02]     "pilotErrorCode": 0,
[2025-10-10 20:28:02]     "pilotErrorDiag": "",
[2025-10-10 20:28:02]  *** Listing of results directory ***
[2025-10-10 20:28:02] total 412252
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 04:34 pilot3.tar.gz
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 04:53 queuedata.json
[2025-10-10 20:28:02] -rwx------. 1 boincer umatlas     36292 Oct 10 04:54 runpilot2-wrapper.sh
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas       100 Oct 10 15:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 20:28:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 15:51 run_atlas
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas       105 Oct 10 15:51 job.xml
[2025-10-10 20:28:02] -rw-r--r--. 2 boincer umatlas 218472069 Oct 10 15:51 EVNT.46676267._001446.pool.root.1
[2025-10-10 20:28:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 15:51 start_atlas.sh
[2025-10-10 20:28:02] drwxrwx--x. 2 boincer umatlas        68 Oct 10 15:51 shared
[2025-10-10 20:28:02] -rw-r--r--. 2 boincer umatlas    569686 Oct 10 15:51 input.tar.gz
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas         0 Oct 10 15:51 boinc_lockfile
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 15:51 pandaJob.out
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas    975541 Oct 10 15:52 agis_schedconf.cvmfs.json
[2025-10-10 20:28:02] drwx------. 5 boincer umatlas      4096 Oct 10 15:52 pilot3
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas      6794 Oct 10 20:19 init_data.xml
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas 195137918 Oct 10 20:25 HITS.46676269._035574.pool.root.1
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas       531 Oct 10 20:25 boinc_task_state.xml
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas      1044 Oct 10 20:26 memory_monitor_summary.json
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas   1560580 Oct 10 20:26 agis_ddmendpoints.agis.ALL.json
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas    475445 Oct 10 20:26 log.46676269._035574.job.log.tgz.1
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas        95 Oct 10 20:26 pilot_heartbeat.json
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas      7829 Oct 10 20:27 heartbeat.json
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 10 20:27 boinc_mmap_file
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas        28 Oct 10 20:27 wrapper_checkpoint.txt
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas      4824 Oct 10 20:27 pilotlog.txt
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas   1843474 Oct 10 20:28 log.46676269._035574.job.log.1
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas       357 Oct 10 20:28 output.list
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas       620 Oct 10 20:28 runtime_log
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas   2334720 Oct 10 20:28 result.tar.gz
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas       654 Oct 10 20:28 s8PODmS4NR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhePMDmVEp3Ln.diag
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas      8699 Oct 10 20:28 runtime_log.err
[2025-10-10 20:28:02] -rw-r--r--. 1 boincer umatlas     21039 Oct 10 20:28 stderr.txt
[2025-10-10 20:28:02] HITS file was successfully produced:
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas 195137918 Oct 10 20:25 shared/HITS.pool.root.1
[2025-10-10 20:28:02]  *** Contents of shared directory: ***
[2025-10-10 20:28:02] total 406780
[2025-10-10 20:28:02] -rw-r--r--. 2 boincer umatlas 218472069 Oct 10 15:51 ATLAS.root_0
[2025-10-10 20:28:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 15:51 start_atlas.sh
[2025-10-10 20:28:02] -rw-r--r--. 2 boincer umatlas    569686 Oct 10 15:51 input.tar.gz
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas 195137918 Oct 10 20:25 HITS.pool.root.1
[2025-10-10 20:28:02] -rw-------. 1 boincer umatlas   2334720 Oct 10 20:28 result.tar.gz
20:28:04 (761671): run_atlas exited; CPU time 45104.105764
20:28:04 (761671): called boinc_finish(0)

</stderr_txt>
]]>

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